Post on 14-Jan-2016
description
transcript
MolProbity Ramachandran analysis
http://kinemage.biochem.duke.edu Lovell, Davis, et al. Proteins 50:437 (2003)
General case
-180
1800-180
180
0
Phi
Psi
Pre-proline
Trans proline
Glycine
Isoleucine and valine
Cis proline
-180
1800-180
180
0
Phi
Psi
-180
1800-180
180
0
Phi
Psi
-180
1800-180
180
0
Phi
Psi
-180
1800-180
180
0
Phi
Psi
-180
1800-180
180
0
Phi
Psi
58 GLN
203 GLU
9 ARG
29 VAL
339 PRO
96.0% (410/427) of all residues were in favored (98%) regions.98.8% (422/427) of all residues were in allowed (>99.8%) regions.
There were 5 outliers (phi, psi): 9 ARG (-105.0, -67.4) 29 VAL (99.2, -7.4) 58 GLN (2.9, -56.3) 203 GLU (149.1, 31.1) 339 PRO (22.4, 97.4)
ATphase.pdb, model 1