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Illustration of the evaluation of risk prediction models in randomized trialsExamples from women’s health studies
Parvin Tajik, MDPhD candidateDepartment of Clinical Epidemiology & BiostatisticsDepartment of Obstetrics & GynecologyAcademic Medical Center, University of Amsterdam, the Netherlands
FHCRC 2014 Risk Prediction SymposiumJune 11, 2014
Clinical Problem I
Pre-eclampsia
fullPIERS model
Lancet, 2011
Development Method
• Patients: • 2000 women admitted in hospital for pre-eclapmsia
(260 event)
• Outcome: • Maternal mortality or other serious complications of
pre-eclampsia
• Logistic regression model with stepwise backward elimination
Final model
Logit P(D) = 2.68 – (0.054 × gestational age at eligibility) + (1.23 × chest pain or dyspnoea) – (0.027 × creatinine) + (0.21 × platelets) + (0.00004 × platelets2) + (0.01 × AST) – (0.000003 × AST2) + (0.00025 × creatinine × platelet) – (0.00007 × platelets × AST) – (0.0026 × platelets × SpO2)
Performance of full-PIERS model
Reported good risk discrimination and calibration
Online calculator
HYPITAT trial (2005-2008)
• PP Women at 36-41 wks of pregnancy with mild pre-eclampsia (n=750)
• I I Early Induction of labor (LI)
• C C Expectant monitoring (EM)
• O O Composite measure of adverse maternal outcomes
HYPTAT Results
(relative risk 0.71, 95% CI 0.59–0.86, p<0·0001)
ManagementManagement Adverse maternal Adverse maternal outcomesoutcomes
TotalTotal
Labor induction 117 (31%) 377Expectant monitoring 166 (44 %) 379
Modeling
Logit P(D=1|T,Y) = β0 + β1T + β2Y + β3TY
•D = 1 Adverse maternal outcome•Y = fullPIERS score•T = Treatment
• 1 Labor induction • 0 Expectant monitoring
FullPIERS for guiding labor induction
P for interaction: 0.93
fullPIERS score
Clinical Problem II
Preterm birth
Cervical pessary• Medical device inserted to vagina• to provide structural support to cervix
ProTWIN trial (2009-2012)
• P Women with multiple pregnancy (twin or triplet) between 12 & 20 weeks pregnancy
• I Cervical Pessary (n = 403)• C Control (n = 410)
• O Primary: Composite Adverse perinatal outcome
ProTWIN Results
(relative risk 0.98, 95% CI 0.69–1.39)
ManagementManagement Composite adverse Composite adverse perinatal outcomeperinatal outcome
TotalTotal
Pessary 53 (13%) 401No pessary 55 (14 %) 407
Pre-specified subgroup analysis
Cervical length (<38 mm vs >= 38 mm)
Pre-specified subgroup analysis
Trial Conclusion: Clinicians should consider a cervical pessary in women with a multiple pregnancy and a short
cervical length.
Cervical length Pessary group
Control group
RR (95%CI)
CxL < 38 mm 12% 29% 0.42 (0.19-0.91)CxL >= 38 mm 13% 10% 1.26 (0.74-2.15)
(P for interaction 0.01)
Other Markers
1. Obstetric history (parity) • Nulliparous• Parous with no previous preterm birth• Parous with at least one previous preterm birth
2. Chorionicity• Monochorionic• Dichorionic
3. Number of fetuses• Twin• Triplet
One marker at a time analysis
Other Potential Treatment Selection Factors
% Poor Outcome Odds Ratio (95% CI)
Odds Ratio (95% CI)
Int. P-value
Pessary Control
Cervical length
< 38 mm 11.54 29.09 0.32 (0.13-0.79) 0.010
≥ 38mm 12.85 10.13 1.31 (0.75-2.30)
Chorionicity
Monochorionic 13.79 26.00 0.46 (0.21-0.97) 0.015
Dichorionic 13.06 9.51 1.43 (0.86-2.37) Obstetric history
Nulliparous 13.12 18.30 0.67 (0.40-1.13) 0.212
Parous with no previous preterm birth 9.93 8.28 1.22 (0.56-2.66)
Parous with at least one previous preterm birth
31.03 3.85 11.25 (1.31-96.4) 0.012
Number of foetuses
Twin 12.50 13.32 0.98 (0.61-1.41) 0.301
Triplet 44.44 22.22 2.8 (0.36-21.73)
Modeling
Logit P(D=1|T,Y) = β0 + β1T + Σ βiYi + Σ βjTYj
•D = 1 composite poor perinatal outcome•Y = Markers•T = Treatment
• 1 pessary• 0 control
- Internal validation by bootstrapping
Multi-marker modelPredictor OR (95% CI) Beta*
P-value
Intercept
-2.08
<0.001 Main terms Pessary 1.13 (0.57-2.24) 0.12 0.426
Cervical length <38 mm 2.20 (1.09-4.46) 0.79 <0.001
Monochorionic 2.44 (1.33-4.47) 0.89 <0.001
Parous with no previous preterm birth 0.53 (0.27-1.06) -0.63 0.031
Parous with at least one previous preterm birth 0.34 (0.04- 2.63) -1.09 0.165
Triplet 1.49 (0.28- 8.05) 0.40 0.010
Interaction terms
Pessary × Cervical length <38 mm 0.52 (0.19-1.42) -0.65 0.058
Pessary × Monochorionic 0.41 (0.16-1.05) -0.89 0.009
Pessary × Parous with no previous preterm birth 1.52 (0.58-3.98) 0.42 0.312
Pessary × Parous with at least one previous preterm birth 7.24 (0.78-67.65) 1.98 0.020
* Shrunken with an average shrinkage factor of 0.76c-stat : 0,71 (95%CI: 0,66-0,77); optimism-corrected c-stat: 0,69 (95%CI: 0,63-0,74)
How can the model be used in practice?
Predicted benefit from pessary
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* ** *** ** ** ** **** * ** ** **** *** **** ***** * *** ** *** **** * ** *** ** **** * ***** ***** ** ** ** ** ***** ****
-0.2 -0.1 0.0 0.1 0.2
Predicted Difference (Control-Pessary) in Poor Perinatal Outcome
Favors Control Favors Pessary
Calibration of the predicted benefit
-30 -20 -10 0 10 20 30 40
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Expected Treatment Effect
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Model performance
-30 -20 -10 0 10 20 30 40
-30
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Expected Treatment Effect
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Conclusion
• Common assumption for application of risk prediction models for treatment selection:“Being at higher risk of outcome implies a
larger benefit from treatment” • Not necessarily true
• Developing models using trial data and modeling the interaction between markers and treatment might be a more optimal strategy
Open Research Questions
• Optimal modeling strategy?
• Optimal algorithm for variable selection?
• Optimal method for optimism correction?
Thanks!Any Questions?
Multimarker vs. CxL only
Multimarker + Multimarker -
Short cervix 174 9
Long cervix 120 505
Two examples