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Energy is never created or destroyed, only transformed Entropy (disorder) increases Laws of...

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Energy is never created or destroyed, only transformed Entropy (disorder) increases Laws of thermodynamics
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Page 1: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Energy is never created or destroyed, only transformed Entropy (disorder) increases

Laws of thermodynamics

Page 2: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Convert energy source to ATP: usable cellular energyTransforming energy

light food

ATP

Page 3: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

ATP: Energy Currency for the cell Phosphate bonds are highly unstable.

H2O Pi

G = -7.3 kcal/mol

Page 4: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

ATP powers many reactions in cells

Page 5: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

ATP powers many reactions in cells

Page 6: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Active transport Specific transport protein required Energy required! Any kind of molecules Either direction

Can move against gradient Can transport all molecules

No equilibrium

Page 7: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Simple active transport Energy from ATP

Page 8: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Simple active transport Energy from ATP Directional transport One kind of molecule

Page 9: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Simple active transport PMCA transporter removes Ca2+ from cytoplasm

Very low [Ca2+] required for signaling

Ca2+

ATP

ADP

Page 10: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

How do we get ATP from Glucose? Transfer energy stored in glucose to a storage molecule

ATP NADH

Glycolysis- Oxidizing glucose to pyruvate Citric Acid Cycle – Oxidizing pyruvate to CO2 Election Transport – Collecting electrons from NADH and

transferring this energy towards making ATP.

Page 11: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

H-C-OH units Often used for energy by cells Glucose is a simple 6C sugar

Carbohydrates

Page 12: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Polymer: polysaccharides (complex carbohydrates) starch cellulose glycogen chitin peptidoglycan

Carbohydrates

Page 13: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Gain of electrons Increased number of bonds to O

O pulls e– from C

Oxidation

H – C – H

H

––

H

mostreduced

H – C – H

OH–

H

H – C – H

O

– –

H – C – OH

O

– –

O = C = O

mostoxidized

Page 14: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

When one molecule is oxidized, another is reduced Electron carriers (“coenzymes”): NAD+, FAD

Oxidation reactions

H – C – H

OH–

H

H – C – H

O

– –oxidation

2 e–

reductionNAD+ NADH

oxidation

Page 15: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Glucose → CO2 is highly exergonic Same reaction as burning paper or wood Oxidation

“Burning” sugars

freeenergy

(G)

reaction progress →

glucose

CO2

Page 16: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Glucose → CO2 is highly exergonic Same reaction as burning paper or wood Oxidation

“Burning” sugars

O = C = O

Page 17: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Glucose → CO2 is highly exergonic Same reaction as burning paper or wood Oxidation

“Burning” sugars

freeenergy

(G)

reaction progress →

glucose

CO2

Page 18: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Glucose → CO2 is highly exergonic Same reaction as burning paper or wood Oxidation

“Burning” sugars

freeenergy

(G)

reaction progress →

glucose

CO2

Page 19: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Biochemical pathway Enzymes catalyze steps Energy captured in ATP

“Burning” sugars

freeenergy

(G)

reaction progress →

glucose

CO2

Page 20: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

higherenergy

lowerenergy

Oxidized molecules have less chemical energy Energetic electrons transferred to carriers

“Burning” sugars

freeenergy

(G)

reaction progress →

glucose

CO2

H – C – H

OH

––

H

H – C – H

O

– –oxidation

2 e–

reductionNAD+ NADH

Page 21: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Complete oxidation of glucose

4 stages: Glycolysis Citric acid cycle Electron transport Chemiosmosis

Aerobic cell respiration

6 CO2

oxidationglucose

Page 22: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Partial oxidation of glucose in cytosol1. Glycolysis

2 pyruvateoxidationglucose

2 ATP, 2 NADHYum!gluT

Page 23: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

First step: phosphorylation catalyzed by hexokinase Energy invested Allows facilitated transport

1. Glycolysis

glucose 6-phosphatehexokinaseglucose

ADPATP

P

Page 24: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

hexokinase

Another phosphorylation step 6C molecule split into two 3C molecules

1. Glycolysis

glucose6-phosphate

glucose

ADPATP

P

ADPATP

PP

P

P

PFK

Page 25: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

hexokinase

Oxidation Energy stored as high-energy e– on NADH

1. Glycolysis

glucose6-phosphate

glucose

ADPATP

P

ADPATP

PP

P

P

NADHNAD+

NADHNAD+

P

P

P

P

PFK

Page 26: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

ATP

hexokinase

2 ATP synthesis steps Net gain of 2 ATP per glucose 6C glucose → 2 3C pyruvates

1. Glycolysis

glucose6-phosphate

glucose

ADPATP

P

ADPATP

PP

P

P

NADHNAD+

NADHNAD+

P

P

P

P

ATPADP

ATPADP

ADP

ATPADP

P

P

pyruvatePFK

Page 27: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

AKA tricarboxylic acid cycle (TCA), AKA Krebs cycle Occurs in matrix of mitochondria (or cytosol in prokaryotes)

2. Citric Acid Cycle (CAC)

Page 28: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

“Transition step” Transport into matrix Connects glycolysis to CAC

2. Citric Acid Cycle (CAC)

cytosol

i.m.o.m.

matrix

acetylCoA

pyruvate

CO2

Coenzyme A

NADH

NAD+

Page 29: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

“Transition step” Large protein complex spans o.m. and i.m. Transporter and enzyme Oxidation of one carbon to CO2

Attachment of coenzyme A

2. Citric Acid Cycle (CAC)

cytosol

i.m.o.m.

matrix

acetylCoA

pyruvate

CO2

Coenzyme A

NADH

NAD+

Page 30: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

2C acetyl CoA + 4C = 6C citric acid2. Citric Acid Cycle (CAC)

acetylCoA CoA

citric acid

Page 31: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

2 oxidation reactions complete the oxidation of glucose2. Citric Acid Cycle (CAC)

acetylCoA

CO2

CoA

NADH

NAD+

citric acid

NADH

NAD+

CO2

Page 32: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

One GTP synthesized and converted to ATP2. Citric Acid Cycle (CAC)

acetylCoA

CO2

CoA

NADH

NAD+

citric acid

NADH

NAD+

CO2

ATP

GDP

GTP ADP

Page 33: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Two more oxidation steps regenerate original 4C molecule2. Citric Acid Cycle (CAC)

acetylCoA

CO2

CoA

NADH

NAD+

citric acid

NADH

NAD+

CO2

ATP

GDP

GTP ADP

FADH2

FAD

NADHNAD+

Page 34: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Where’s the carbon from glucose?2. Citric Acid Cycle (CAC)

Page 35: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Where’s the carbon from glucose? 6 CO2

Where’s the energy from glucose?

2. Citric Acid Cycle (CAC)

Page 36: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Where’s the carbon from glucose? 6 CO2

Where’s the energy from glucose? 4 net ATP (2 from glycolysis, 2 for each pyruvate in CAC)

2. Citric Acid Cycle (CAC)

Page 37: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Where’s the carbon from glucose? 6 CO2

Where’s the energy from glucose? 4 net ATP (2 from glycolysis, 2 for each pyruvate in CAC) 10 NADH (2 glycolysis, 2 transition, 6 CAC)

2. Citric Acid Cycle (CAC)

Page 38: Energy is never created or destroyed, only transformed  Entropy (disorder) increases Laws of thermodynamics.

Where’s the carbon from glucose? 6 CO2

Where’s the energy from glucose? 4 net ATP (2 from glycolysis, 2 for each pyruvate in CAC) 10 NADH (2 glycolysis, 2 transition, 6 CAC) 2 FADH2 (CAC)

2. Citric Acid Cycle (CAC)


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