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A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and DOE Molecular Spectroscopy Symposium, June, 2014 anael Kidwell, Tim Zwier, Danny Tabor, and Ned Sibe
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Page 1: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to

Hydronaphthalenes, Indanes, and Cyclohexane

Funded by NSF and DOE

Molecular Spectroscopy Symposium, June, 2014

Nathanael Kidwell, Tim Zwier, Danny Tabor, and Ned Sibert

Page 2: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

DPE C2h

DPOE C2h

DPE C2

DPOE C2

Probing molecular structure with CH chromophoreswith the Zwier Group at Purdue

Our goal is to develop theoretical models that will enable us to use the CH stretch as a probe of environment. Initial work focuses on developing Hamiltonians that allow us to predicting spectra of the molecules based on input from electronic structure theory and couplings that are scaled to the DPE C2h spectrum.

Page 3: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

so/ss so

so/ssso/ss

ss/so as

asas

ss/so

ss as

asss/so

Page 4: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Background

CH2 Scissor CH Sym Stretch CH Asym Stretch 1450 cm-1 2960 cm-1 2980 cm-1

Images from Molecular Vibration; Wikipedia, the free encyclopedia

1500 3000

Wavenumber (cm-1)

A

/ /

ss asso

Page 5: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

2900 3000

ss as

2900 3000

1) Calculate Ess, Eas, Eso and W with DFT.

2) Scale the results using a, b, and c.

3) For different X-CH2-Y species use the same a, b, and c.

The Strategy

The Hamiltonian

Stretch-Bend Fermi Coupling

Page 6: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

An Aside

One can use either a symmetrized representation

Or one can use a localized representation

Page 7: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Complication No. 1 The spectra are extremely congested.

SolutionFind a good experimentalist.

Page 8: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Complication No. 2Normal modes are sensitive to small potential changes.

SolutionUse local modes.

Local modes are insensitive to small potential changes.Local modes potentials are transferrable.The local mode picture is approximate.

Page 9: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

1476 cm-1

1479 cm-1

The CH2 Scissor Vibrations of TetralinNM picture hides interactions with scissor modes

Page 10: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

1466 cm-1

The Scaled & Localized CH2 Scissor Vibrations of Tetralin

Page 11: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Enough with the preliminaries.

Onto the main event.

Page 12: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

THNI2M

tetralin

A

C

AB

14DHN A

A

B

A

indane

A

B

A

indene 12DHN

B

A

B

A

A

Page 13: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Comparison to Normal Mode Results

Page 14: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Model HamiltonianStart with a zero order Hamiltonian and dipole

N

iii nH

1

)0( )2

1(

N

iiiq

1

)0(

Add some Fermi coupling terms

kjikjiikl chaaafH

,,

)1( .).(

Pick a basis, diagonalize the H matrix, and calculate the spectrum.

B3LYP/6-311+G(d,p)

Page 15: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

12DHN Spectra

With anharmonic terms included.

Page 16: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

12DHN Spectra

CH2 Decoupling Approximation

Page 17: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

CH2 Decoupling Approximation

Calculate bilinear terms in dipole

14DHN Spectra

Page 18: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Comparison of Model Results to Experimental Results

Page 19: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

CH2 Decoupling Approximation

Page 20: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

Concluding Remarks

• Developed a model for CH2 stretches.• Hamiltonian has parameters that are fit to one

member of a group of similar species.• Working to extend to CH3 groups.• Working to better parameterize the

Hamiltonian.• Would like to add waters.

Page 21: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

On to CH3 groups!

Page 22: A First-Principles Model of Fermi Resonance in the Alkyl CH Stretch Region: Application to Hydronaphthalenes, Indanes, and Cyclohexane Funded by NSF and.

CH3-CD3 R1

F2

F1

R2

R3 F3


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