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A physical model of axonal damage due to oxidative stress Anne E. Counterman* , Terrence G. D’Onofrio* , Anne Milasincic Andrews § , and Paul S. Weiss* *Departments of Chemistry and Physics, and § Department of Veterinary and Biomedical Science and Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, PA 16802-6300 Edited by Harry B. Gray, California Institute of Technology, Pasadena, CA, and approved January 17, 2006 (received for review May 18, 2005) Oxidative damage is implicated in the pathogenesis of neurode- generative disorders, including Alzheimer’s, Parkinson’s, and Hun- tington’s diseases, and in normal aging. Here, we model oxidative stress in neurons using photogenerated radicals in a simplified membrane-encapsulated microtubule system. Using fluorescence and differential interference contrast microscopies, we monitor photochemically induced microtubule breakdown on the sup- ported region of membrane in encapsulating synthetic liposomes as a function of lipid composition and environment. Degradation of vesicle-encapsulated microtubules is caused by attack from free radicals formed upon UV excitation of the lipid-soluble fluorescent probe, 6-(9-anthroyloxy)stearic acid. Probe concentration was typ- ically limited to a regime in which microtubule degradation was slow, and microtubule degradation was monitored by changes in the observed protrusion of the membrane surface. The kinetics of microtubule degradation are influenced by lipid saturation level, fluorescent probe concentration, and the presence of free-radical scavengers. This system is sufficient to reproduce some degener- ative morphologies found in vivo. membrane neurodegeneration Alzheimer’s disease Parkinson’s disease microtubule O xidative modifications to proteins in neurons have been implicated in a number of degenerative disorders and have become a controversial topic in elucidating the progression of Parkinson’s, Huntington’s, and Alzheimer’s diseases (1–7). Mi- crotubules (MTs) are key cytoskeletal proteins in nerve cell axons. These protein polymers are responsible for many dispar- ate functions of cells, including structural support and imparting polarity, and they are involved in motility and transport of intracellular cargo (8). Fundamental studies of MTs in vivo are complicated by the presence of the full complement of biomol- ecules that are required for cell survival. Thus, a substantial effort has been devoted to characterizing MT dynamics in vitro, and these studies have led to increased understanding of issues such as dynamic instability (9) and the involvement of molecular motors in producing motility (10). To mimic the confinement of a bilayer, MT assemblies (asters) have previously been examined in rigid, microfabricated wells (11). The drawback of such studies is that interactions between MTs and components of the elastic lipid membrane are neglected. It is important to be able to isolate and to quantify specific factors that impact the structural integ- rity of the cytoskeleton, while maintaining a simplified cell-like environment. Toward this aim, we have developed a minimal physical system with which to investigate the effects of oxidative stress on the cytoskeleton. Previous studies have demonstrated that incorpo- rating actin and tubulin into liposomes and inducing these proteins to polymerize results in a morphological change in the liposome; a protrusion of the membrane is observed at one or both ends of the protein polymer (12–15). The asymmetry occurs frequently, when the MT wraps around within the encapsulating liposome (16). Here, we employ the membrane as a chemical reservoir to examine individual factors that lead to degradation or stabilization of MTs. In our model, the chemical composition of the membrane is controlled during liposome assembly and the elasticity of the bilayer is retained (and is tunable according to lipid composition). The roles of individual components (e.g., specific lipids, MT-associated proteins, or protective molecules that function as radical scavengers) can be elucidated by recon- stituting the liposomes with varying concentrations of these species. We demonstrate that the rate of MT degradation is influenced by the lipid saturation level, fluorescent probe (rad- ical source) concentration, f luorescent probe location, and pres- ence of free-radical scavengers. Results Overview. An intrinsic property of MTs is their dynamic instability: the ability to alternate between periods of polymerization and rapid depolymerization, or collapse (9). We focus here on inducing catastrophic collapse and measuring the rate of that collapse. A general schematic of our experiment is shown in Fig. 1. We polymerize MTs within lipid vesicles prepared from known com- positions of synthetic lipids and f luorescent probe(s). Upon heating vesicles containing tubulin and GTP to 37°C, tubulin polymerizes to form MTs. A mechanism that explains the formation of a single filament of MTs by alignment of individual filaments (and thus creating a single-membrane protrusion) has previously been out- lined by Hotani and coworkers (17). Most of the experiments that we describe here incorporate the UV-excitable probe 6-(9- anthroyloxy)stearic acid (6-AS) into the lipid membrane. UV excitation of anthracene has been shown to promote free-radical formation (18); in our studies, we exploit anthracene-based fluo- rescent probes to photoinitiate a free-radical cascade that leads to MT degradation. We track the extent of MT degradation by measuring the perturbation of the membrane extension. Fig. 2 illustrates this process for a single 50-msec exposure of a vesicle- encapsulated MT to UV light. Comparison of the micrographs recorded before and after photoexcitation of the 6-AS probe shows a progression of decreasing membrane extension, corresponding to degradation of the supporting MT filament. Note that the place- ment of the radical source in the membrane enables chemical coupling of the photogenerated radical to the adjacent (encapsu- lated) MT (vide infra). In an initial experiment, after obtaining a fluorescence micro- graph of the vesicle with the tubulin extension, we observed that the extended region of the membrane exhibited pearling and that the Conflict of interest statement: No conflicts declared. This paper was submitted directly (Track II) to the PNAS office. Abbreviations: 2-AS, 2-(9-anthroyloxy)stearic acid; 6-AS, 6-(9-anthroyloxy)stearic acid; 16- AP, 16-(9-anthroyloxy)palmitic acid; DLPC, 1,2-dilauroyl-sn-glycero-3-phosphocholine; DOPS, 1,2-dioleoyl-sn-glycero-3-[phospho-L-serine]; MT, microtubule. Present address: Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520. Present address: U.S. Army Edgewood Chemical Biological Center, Aberdeen Proving Ground, MD 21010. To whom correspondence should be addressed at: 104 Davey Laboratory, Departments of Chemistry and Physics, Pennsylvania State University, University Park, PA 16802-6300. E-mail: [email protected]. © 2006 by The National Academy of Sciences of the USA 5262–5266 PNAS April 4, 2006 vol. 103 no. 14 www.pnas.orgcgidoi10.1073pnas.0504134103 Downloaded by guest on April 5, 2021
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  • A physical model of axonal damagedue to oxidative stressAnne E. Counterman*†, Terrence G. D’Onofrio*‡, Anne Milasincic Andrews§, and Paul S. Weiss*¶

    *Departments of Chemistry and Physics, and §Department of Veterinary and Biomedical Science and Huck Institutes of the Life Sciences, Pennsylvania StateUniversity, University Park, PA 16802-6300

    Edited by Harry B. Gray, California Institute of Technology, Pasadena, CA, and approved January 17, 2006 (received for review May 18, 2005)

    Oxidative damage is implicated in the pathogenesis of neurode-generative disorders, including Alzheimer’s, Parkinson’s, and Hun-tington’s diseases, and in normal aging. Here, we model oxidativestress in neurons using photogenerated radicals in a simplifiedmembrane-encapsulated microtubule system. Using fluorescenceand differential interference contrast microscopies, we monitorphotochemically induced microtubule breakdown on the sup-ported region of membrane in encapsulating synthetic liposomesas a function of lipid composition and environment. Degradationof vesicle-encapsulated microtubules is caused by attack from freeradicals formed upon UV excitation of the lipid-soluble fluorescentprobe, 6-(9-anthroyloxy)stearic acid. Probe concentration was typ-ically limited to a regime in which microtubule degradation wasslow, and microtubule degradation was monitored by changes inthe observed protrusion of the membrane surface. The kinetics ofmicrotubule degradation are influenced by lipid saturation level,fluorescent probe concentration, and the presence of free-radicalscavengers. This system is sufficient to reproduce some degener-ative morphologies found in vivo.

    membrane � neurodegeneration � Alzheimer’s disease � Parkinson’sdisease � microtubule

    Oxidative modifications to proteins in neurons have beenimplicated in a number of degenerative disorders and havebecome a controversial topic in elucidating the progression ofParkinson’s, Huntington’s, and Alzheimer’s diseases (1–7). Mi-crotubules (MTs) are key cytoskeletal proteins in nerve cellaxons. These protein polymers are responsible for many dispar-ate functions of cells, including structural support and impartingpolarity, and they are involved in motility and transport ofintracellular cargo (8). Fundamental studies of MTs in vivo arecomplicated by the presence of the full complement of biomol-ecules that are required for cell survival. Thus, a substantialeffort has been devoted to characterizing MT dynamics in vitro,and these studies have led to increased understanding of issuessuch as dynamic instability (9) and the involvement of molecularmotors in producing motility (10). To mimic the confinement ofa bilayer, MT assemblies (asters) have previously been examinedin rigid, microfabricated wells (11). The drawback of such studiesis that interactions between MTs and components of the elasticlipid membrane are neglected. It is important to be able to isolateand to quantify specific factors that impact the structural integ-rity of the cytoskeleton, while maintaining a simplified cell-likeenvironment.

    Toward this aim, we have developed a minimal physical systemwith which to investigate the effects of oxidative stress on thecytoskeleton. Previous studies have demonstrated that incorpo-rating actin and tubulin into liposomes and inducing theseproteins to polymerize results in a morphological change in theliposome; a protrusion of the membrane is observed at one orboth ends of the protein polymer (12–15). The asymmetry occursfrequently, when the MT wraps around within the encapsulatingliposome (16). Here, we employ the membrane as a chemicalreservoir to examine individual factors that lead to degradationor stabilization of MTs. In our model, the chemical composition

    of the membrane is controlled during liposome assembly and theelasticity of the bilayer is retained (and is tunable according tolipid composition). The roles of individual components (e.g.,specific lipids, MT-associated proteins, or protective moleculesthat function as radical scavengers) can be elucidated by recon-stituting the liposomes with varying concentrations of thesespecies. We demonstrate that the rate of MT degradation isinfluenced by the lipid saturation level, f luorescent probe (rad-ical source) concentration, f luorescent probe location, and pres-ence of free-radical scavengers.

    ResultsOverview. An intrinsic property of MTs is their dynamic instability:the ability to alternate between periods of polymerization and rapiddepolymerization, or collapse (9). We focus here on inducingcatastrophic collapse and measuring the rate of that collapse. Ageneral schematic of our experiment is shown in Fig. 1. Wepolymerize MTs within lipid vesicles prepared from known com-positions of synthetic lipids and fluorescent probe(s). Upon heatingvesicles containing tubulin and GTP to 37°C, tubulin polymerizesto form MTs. A mechanism that explains the formation of a singlefilament of MTs by alignment of individual filaments (and thuscreating a single-membrane protrusion) has previously been out-lined by Hotani and coworkers (17). Most of the experiments thatwe describe here incorporate the UV-excitable probe 6-(9-anthroyloxy)stearic acid (6-AS) into the lipid membrane. UVexcitation of anthracene has been shown to promote free-radicalformation (18); in our studies, we exploit anthracene-based fluo-rescent probes to photoinitiate a free-radical cascade that leads toMT degradation. We track the extent of MT degradation bymeasuring the perturbation of the membrane extension. Fig. 2illustrates this process for a single 50-msec exposure of a vesicle-encapsulated MT to UV light. Comparison of the micrographsrecorded before and after photoexcitation of the 6-AS probe showsa progression of decreasing membrane extension, corresponding todegradation of the supporting MT filament. Note that the place-ment of the radical source in the membrane enables chemicalcoupling of the photogenerated radical to the adjacent (encapsu-lated) MT (vide infra).

    In an initial experiment, after obtaining a fluorescence micro-graph of the vesicle with the tubulin extension, we observed that theextended region of the membrane exhibited pearling and that the

    Conflict of interest statement: No conflicts declared.

    This paper was submitted directly (Track II) to the PNAS office.

    Abbreviations: 2-AS, 2-(9-anthroyloxy)stearic acid; 6-AS, 6-(9-anthroyloxy)stearic acid; 16-AP, 16-(9-anthroyloxy)palmitic acid; DLPC, 1,2-dilauroyl-sn-glycero-3-phosphocholine;DOPS, 1,2-dioleoyl-sn-glycero-3-[phospho-L-serine]; MT, microtubule.

    †Present address: Department of Molecular Biophysics and Biochemistry, Yale University,New Haven, CT 06520.

    ‡Present address: U.S. Army Edgewood Chemical Biological Center, Aberdeen ProvingGround, MD 21010.

    ¶To whom correspondence should be addressed at: 104 Davey Laboratory, Departments ofChemistry and Physics, Pennsylvania State University, University Park, PA 16802-6300.E-mail: [email protected].

    © 2006 by The National Academy of Sciences of the USA

    5262–5266 � PNAS � April 4, 2006 � vol. 103 � no. 14 www.pnas.org�cgi�doi�10.1073�pnas.0504134103

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  • MT had depolymerized (19). Pearling was typically observed onlyat high 6-AS concentrations, and is consistent with the behavior ofa membrane tether after the release of stress (20, 21). Importantly,pearling has been noted in axonal dystrophy of aging primates andin Alzheimer’s disease patients, both of which have been attributedto axon degradation but were thought to require the MT-associatedprotein tau, which is not included in our physical model (22–25). Wehave systematically examined the dynamics of this system to un-derstand and to quantify factors that affect MT degradation.

    Confirming Free-Radical Involvement. Control experiments werecarried out to confirm that free-radical formation from 6-AS wasresponsible for MT degradation. To generate free radicals in vitro,MTs were polymerized on a slide in the presence of low levels ofiron, and then hydrogen peroxide was introduced. The mixture ofiron and hydrogen peroxide is a well known system for free-radicalgeneration. Within minutes, degradation of the in vitro MTs was

    observed. Next, to confirm that 6-AS was required for degradationof the membrane-encapsulated MTs, two sets of experiments wereperformed: UV irradiation of MT-containing liposomes that didnot contain a fluorescent probe and substitution of other fluores-cent probes (that were not expected to produce free radicals) inplace of 6-AS. No MT degradation was observed for UV irradiationof non-fluorophore-containing liposomes or for vesicles containing1,1�-didodecyl-3,3,3�,3�- tetramethylindocarbocyanine (DiI-C12) or1,1�-dioctadecyl-3,3,3�,3�- tetramethylindodicarbocyanine (DiD)(excited at their respective peak absorption wavelengths). Thus, weconclude that (i) MT degradation can be induced by free-radicalattack and (ii) the membrane-soluble free-radical source 6-AS isresponsible for the photoinduced degradation that we observe inour experiments on MTs encapsulated in liposomes.

    In Fig. 2, the length of the stretched membrane region is plottedas a function of time elapsed after 50-msec photoinitiation. Thedegradation trend that we observed under these conditions wasapproximately linear over the first minute and appeared to plateauafter 2 min. Periods of zero degradation (which appear as steps inthe degradation plot, e.g., at 70–78 sec, 95–101 sec, and 117–128sec) were typical. There did not appear to be a consistent patternin the frequency or duration of these ‘‘pauses’’ in MT degradation.The variability we observed during MT catastrophic collapse mayarise from factors such as lattice discontinuities in the MT assemblyor variations in MT capping (26).

    Below, we demonstrate that this model system can be used toquantify effects associated with modulating components of thelipid membrane that influence MT degradation, by altering thefree-radical source (concentration and location longitudinallywithin the lipid leaflet), the lipid bilayer (lipid unsaturation), andthe presence of free-radical scavengers in the membrane or thevesicle-encapsulated fluid volume. We note that within a givensample of synthetic lipid vesicles, the lengths and widths ofmembrane protrusions observed varied widely. To ensure thereliability of quantitative comparisons for degradation ratesmeasured from different samples, we examined numerous ves-icles from each preparation and also compared different prep-arations having the same composition.

    Effect of Varying the Free-Radical Source: Concentration and Local-ization. To monitor the effect of changing the concentration offree radicals on MT degradation rate, we performed severalexperiments on vesicles synthesized by using different concen-trations of 6-AS (spanning a range of two orders of magnitude)in a matrix of 5:2 1,2-dilauroyl-sn-glycero-3-phosphocholine(DLPC):1,2-dioleoyl-sn-glycero-3-[phospho-L-serine] (DOPS)(Fig. 3). As expected, increasing the concentration of 6-ASincreased the rate at which MTs were degraded. However, wenote that the variability among vesicles was high (Fig. 3).

    A question that arises when considering the free-radical sourceis the exact location of the anthracene moieties with respect to theencapsulated MT. We cannot control the lateral position of theincorporated fluorophore within the lipid bilayer; in this case,because 6-AS partitions into fluid-phase lipids, it is found through-out the bilayer. However, the position of the anthracene grouplongitudinally with respect to the lipid leaflet (i.e., farther away orcloser to the leaflet interior) can be controlled by using differentfluorescent probes. We synthesized batches of 5:2 DLPC:DOPSvesicles using identical 1,800:1 lipid:probe concentrations of 2-(9-anthroyloxy)stearic acid (2-AS) (in which the anthracene groupshould be incorporated closest to the lipid headgroup and thusclosest to the encapsulated MT in the inner leaflet), 6-AS, and16-(9-anthroyloxy)palmitic acid (16-AP) (in which the anthracenegroup should reside near the interior of the lipid bilayer). Com-parison of the MT-degradation rates for these batches of vesiclesgives a relative ordering of 2-AS � 6-AS � 16-AP; MT-degradationrates measured for 2-AS-containing vesicles were �30 times higherthan those measured for the 16-AP-containing vesicles (Fig. 4).

    Fig. 1. Schematic diagram of the experiment. MTs are encapsulated in lipidvesicles fluorescently labeled with 6-AS, a UV-excitable probe. Upon photo-excitation (t � 0), a free-radical cascade is initiated, causing breakdown of theMTs and relaxation of the membrane (t � �).

    Fig. 2. Time progression of a representative experiment. In micrograph A,MT polymerization inside the vesicle causes deformation of the membraneinto a long axon-like extension. Micrograph B shows a 50-msec excitation ofthe 6-AS membrane-associated probe. Micrographs C–E show the progressivechanges in length of the MT-supported membrane extension. The change inlength of the membrane extension is plotted as a function of time-elapsedpost-photoexcitation.

    Counterman et al. PNAS � April 4, 2006 � vol. 103 � no. 14 � 5263

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  • Effect of Incorporating Free-Radical Scavengers. To inhibit free-radical-induced MT degradation, we incorporated free-radicalscavengers into the vesicle-encapsulated system. Studies were per-formed by using vitamin C, which is water-soluble, and vitamins Eand K, which are soluble in the lipid bilayer. Note that the resultsfor vitamin C cannot be directly compared with those for vitaminsE and K because of the difference in localization, solution vs.membrane; thus, the experiments described here are each refer-

    enced to a control (which contained no free-radical scavengers).Fig. 5 shows that inclusion of these free-radical scavengers in thevesicle-encapsulated MT system substantially slowed MT degrada-tion relative to control experiments. A dramatic effect was observedupon inclusion of vitamin C in the solution; on average, MTdegradation was observed to be very slow or did not occur in theseexperiments. At similar concentrations, vitamin C has previouslybeen shown to stop radical-induced damage in human-serumsamples (27). The MT-degradation rates measured for systemsincluding the two membrane-soluble vitamins (E and K) wereidentical within experimental uncertainty (�0.034 � 0.003 �m�secand �0.036 � 0.006 �m�sec, respectively), and both slowed MTdegradation relative to control by over an order of magnitude underthe given lipid, probe, and scavenger concentrations. We alsoconsidered the possibility that the decreases in MT-degradationrates observed upon addition of the antioxidants were due tospectral overlap between the vitamins and the 6-AS fluorescentprobe; however, no spectral overlap with 6-AS is observed forvitamins C or E, and the overlap for vitamin K appears to be small.�Thus, we conclude that the observed reduction in MT degradationis due to free-radical scavenging.

    Varying Lipid Saturation. Another key parameter in our modelsystem is the degree of lipid saturation. Unsaturated lipids, whichare more susceptible to peroxidation than saturated lipids,produce 4-hydroxynonenal upon peroxidation (28), which maycause MT breakdown. We investigated the influence of lipidsaturation by varying the composition of the synthetic vesicles;typical results are shown in Fig. 6. The observed MT degradationrate was highest for vesicles composed of �60% unsaturated

    �When we extrapolated down to the concentration of vitamin K actually used in degrada-tion experiments, we found the absorption to be 2.98 � 10�3 at 362 nm, the peak for 6-AS,yielding an extinction coefficient of �1,000. This is lower than the extinction coefficient of6-AS. Additionally, 6-AS was present in the membrane at 10-fold higher concentrationsthan vitamin K. In our vesicle preparations, the absorption of vitamin K was lower than thatof 6-AS by a factor of 27. Thus, spectral overlap should not have significantly influenced theresults obtained for vesicles doped with vitamin K.

    Fig. 3. Increasing 6-AS concentration increases the rate of MT degradation.Plot of MT degradation rate (or change in membrane extension length) as afunction of the 6-AS concentration used to prepare the MT-encapsulatinglipid vesicles. Error bars represent standard errors of the mean for measure-ments of four, six, and four vesicles (left to right; note that the error bars arepartially occluded for the leftmost point because they are nearly the same sizeas the diamond). The linear fit has R2 � 0.9926.

    Fig. 4. The position of the free-radical source within the membrane affectsthe degradation rate. Degradation rates observed for incorporation of dif-ferent fluorescent lipid probes in vesicles having lipid compositions of 5:2DLPC:DOPS and 1800:1 lipid:probe. The anthracene moiety is closer to thesolvent–membrane interface in the 2-AS probe and farthest (most buried)using 16-AP. The degradation rates showed a striking decrease with distanceof the anthracene moiety from the interface; the fastest rate was observed for2-AS, and degradation was substantially slower when 16-AP was used. Thestandard error of the mean was used for 6-AS (calculated from measurementsof six vesicles). For 2-AS and 16-AP, the standard error of the slope from themeasurement of the degradation rate of one vesicle was used to calculate theerror bar for each (note that the error bars for 16-AP are partially occludedbecause they are nearly the same size as the diamond).

    Fig. 5. Incorporating free-radical scavengers inhibits MT degradation. Typ-ical plots of MT-extension length as a function of time after UV excitation forvesicles containing various antioxidants are shown. All data were recorded forvesicles having lipid compositions of 5:2 DLPC:DOPS and 1,800:1 lipid:6-AS.Vitamins E and K, which are membrane-soluble, were studied at concentra-tions of 11,000:1 lipid:vitamin (data represented by purple squares and bluetriangles, respectively); water-soluble vitamin C was located in the buffer at aconcentration of 5.7 � 10�3 M (data represented by green circles). Data for thecontrol (without antioxidant present) are represented by dark-blue diamonds.For each antioxidant, data from more than one degradation curve are super-imposed to provide a representation of the range of degradation ratesobserved; each data set is distinguished by a different symbol grayscale. Lowconcentrations of antioxidants greatly reduced the degradation rate.

    5264 � www.pnas.org�cgi�doi�10.1073�pnas.0504134103 Counterman et al.

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  • brain polar lipid extract. At the concentration of 6-AS used(14,000:1 lipid:probe), collapse of membrane extensions for thislipid composition was very fast; collapse was typically completein �10 sec (depending on the initial length of the membraneextension). The MT-degradation rate was more than an order ofmagnitude lower for liposomes composed solely of fully satu-rated lipids [DLPC and 1,2-dilauroyl-sn-glycero-3-phosphatidyl-glycerol (DLPG)].

    DiscussionThe simple model system that we have demonstrated hereprovides a ‘‘bottom-up’’ approach to the study of damage to MTsin a cell-mimetic lipid container. This type of system, in which thecytoskeletal proteins and components of the lipid membrane andfluid volume can be well controlled, provides a means ofquantitatively examining factors that influence MT degradation.

    We have characterized the response of MTs in this modelsystem with respect to several factors. Specifically, decreasing theconcentration of the free-radical source (6-AS), increasing thelipid-saturation level, or increasing the concentration of free-radical scavengers led to decreased rates of MT degradation.Positioning the free-radical source (in our studies, the anthra-cene moiety of the UV-excitable fluorophore) toward the centerof the lipid bilayer also led to decreased degradation rates.

    A key aspect of the model system we have developed is theincorporation of the lipid membrane. In contrast with studies ofMTs in solution, this allows us to examine effects arising from theinteraction of cytoskeletal proteins with membrane-associatedspecies. Increasing the complexity of the model in a stepwisefashion by adding cellular components will allow us to mimicprocesses involved in neuronal dystrophies more closely.

    MethodsVesicle Preparation. Vesicles were prepared by using the gentlehydration method of Evans and Needham (29). Lipids were pro-cured from Avanti Polar Lipids. Lipid purity was verified by usingthin-layer chromatography on activated silica plates (KeystoneScientific, Bellefonte, PA), with a chloroform:methanol:water(64:25:4) (vol:vol:vol) solution or a chloroform:methanol:ammo-nium hydroxide (64:25:4) (vol:vol:vol) solution and developed withmolybdenum blue solution (Sigma-Aldrich). Lipids and fluorescentprobes dissolved in chloroform were mixed and deposited on ascored Teflon disk in a beaker. The chloroform was allowed toevaporate, and the resulting film was dried in a vacuum desiccatorfor 6 h. Upon removal from the desiccator, the film was hydratedwith 10 ml of Pipes buffer (pH 6.9; containing 1 mM EGTA, 2 mMMgSO4, and 100 mM Pipes) that had been warmed to at least 55°C.The solution was blanketed with argon, and the beaker was sealedwith aluminum foil. The system was then incubated at 55°C for 4 hand allowed to cool slowly in an insulated box.

    Tubulin Purification. Tubulin was purified from bovine brain by usinga protocol provided by W. O. Hancock (Department of Bioengi-neering, Pennsylvania State University). Briefly, we extracted thecerebrums from fresh bovine brains by dissection on ice. Thecerebrums were processed in a chilled blender in the presence ofprotease inhibitors; the homogenate was clarified in a centrifuge at54,000 � g and 4°C. All subsequent spins were performed at 300,000� g (achieved by using a Beckman Ultra 50.2 Ti rotor). Thesupernatant was collected and warmed to 37°C to induce tubulinpolymerization. This solution was clarified in a centrifuge, and theMT pellet was retained. The MTs were depolymerized on ice andclarified again by centrifugation at 4°C. This polymerization�depolymerization cycle was repeated. Finally, the resulting super-natant was passed through a phosphocellulose column to concen-trate MTs and remove MT-associated proteins.

    Microscopy Methods. For the MT degradation experiments, 20 �l ofvesicles was combined with 10 �l of 10 mM GTP (Sigma-Aldrich)solution and 10 �l of 100 mM tubulin dimer into a cryovial(66008-251; VWR Scientific). We encapsulated tubulin inside ves-icles with a freeze–thaw cycle; the cryovial containing vesicles andtubulin was dipped into liquid nitrogen, and the mixture was thawedon ice. During inspection by using optical microscopy, samples wereheated with an objective heater (Bioptechs, Butler, PA) set to 40°Cto induce tubulin polymerization.

    Experiments were performed on a Nikon Eclipse TE300inverted microscope that was equipped for differential interfer-ence contrast and epifluorescence. A mercury bulb and along-pass filter cube (XF02; Omega Optical, Brattleboro, VT)were used for fluorescence excitation, and an ORCA 100 camera(Hamamatsu Photonics) was used for detection. A 50-msecexposure to UV light was used to initiate MT degradation;progress of the depolymerization was monitored by collectingdifferential interference contrast micrographs.

    We thank Profs. Will Hancock and Donald Schmechel for insightfuldiscussions, Prof. Hancock for the use of his laboratory for purificationof tubulin, Dr. Anat Hatzor for preliminary studies on liposome-encapsulated MTs in our laboratory, and Dr. Michael Elbaum for initialguidance in the encapsulation protocol. This work was supported by theNational Science Foundation. A.E.C. was supported by a Ruth L.Kirschstein National Research Service Award from the National Insti-tutes of Health.

    1. Strong, R., Mattamal, M. B. & Andorn, A. C. (1993) in Free Radicals in Aging,ed. Yu, B. P. (CRC, Ann Arbor, MI), pp. 223–246.

    2. Knight, J. A. (1999) Free Radicals, Antioxidants, Aging, and Disease (Am. Assoc.for Clin. Chem., Washington, DC).

    3. Aksenov, M. Y., Aksenova, M. V., Butterfield, D. A., Geddes, J. W. &Markesbery, W. R. (2001) Neuroscience 103, 373–383.

    4. Beal, M. F. (2002) Free Radical Biol. Med. 32, 797–803.5. Montine, T. J., Neely, M. D., Quinn, J. F., Beal, M. F., Markesbery, W. R.,

    Roberts, L. J., II, & Morrow, J. D. (2002) Free Radical Biol. Med. 33, 620–626.6. Beal, M. F. & Ferrante, R. J. (2004) Nat. Rev. Neurosci. 5, 373–384.7. Cutler, R. G., Kelly, J., Storie, K., Pedersen, W. A., Tammara, A., Hatanpaa, K.,

    Troncoso, J. C. & Mattson, M. P. (2004) Proc. Natl. Acad. Sci. USA 101, 2070–2075.

    Fig. 6. Increasing lipid saturation decreases the rate of MT degradation.Typical plots of MT-extension length as a function of time for various degreesof lipid saturation are shown. The vesicle compositions studied were 5:2DLPC:DLPG (fully saturated), 5:2 DLPC:DOPS (40% unsaturated lipids), andbrain polar lipid extract (60% unsaturated lipids). All lipid compositionsshown were studied by using 14,000:1 lipid:AS concentrations. As in Fig. 5,data from two degradation curves are superimposed for the control compo-sition. Low levels of unsaturated lipid hindered degradation. Free radicals areknown to attack unsaturated lipids in biological membranes, which thenpropagate the radical generation throughout the membrane.

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    1

  • 8. Bray, D. (2001) Cell Movements: From Molecules to Motility (Garland, NewYork), 2nd Ed.

    9. Mitchison, T. & Kirshner, M. (1984) Nature 312, 237–242.10. Desai, A. & Mitchison, T. J. (1997) Annu. Rev. Cell Dev. Biol. 13, 83–117.11. Holy, T. E., Dogterom, M., Yurke, B. & Leibler, S. (1997) Proc. Natl. Acad. Sci.

    USA 94, 6228–6231.12. Miyata, H. & Hotani, H. (1992) Proc. Natl. Acad. Sci. USA 89, 11547–11551.13. Miyata, H., Nishiyama, S., Akashi, K. & Kinosita, K. (1999) Proc. Natl. Acad.

    Sci. USA 96, 2048–2053.14. Fygenson, D. K., Bourdieu, L., Faucheux, L. & Libchaber, A. (1996) in Physics

    of Biomaterials: Fluctuations, Self-assembly, and Evolution, eds. Riste, T. &Sherrington, D. (Kluwer Academic, Dordrecht, The Netherlands), pp. 153–171.

    15. Elbaum, M., Fygenson, D. K. & Libchaber, A. (1996) Phys. Rev. Lett. 76,4078–4081.

    16. Kaneko, T., Itoh, T. J. & Hotani, H. (1998) J. Mol. Biol. 284, 1671–1681.17. Nomura, F., Honda, M., Takeda, S., Inaba, T., Takiguchi, K., Itoh, T. J.,

    Ishijima, A., Umeda, T. & Hotani, H. (2002) J. Biol. Phys. 28, 225–235.18. Wang, Z., Weininger, S. J. & McGimpsey, W. G. (1993) J. Phys. Chem. 97,

    374–378.19. D’Onofrio, T. G., Hatzor, A., Counterman, A. E., Heetderks, J. J., Sandel, M. J.

    & Weiss, P. S. (2003) Langmuir 19, 1618–1623.

    20. Bar-Ziv, R., Tlusty, T., Moses, E., Safran, S. A. & Bershadsky, A. (1999) Proc.Natl. Acad. Sci. USA 96, 10140–10145.

    21. Tsafrir, I., Sagi, D., Arzi, T., Guedeau-Boudeville, M.-A., Frette, V., Kandel,D. & Stavans, J. (2001) Phys. Rev. Lett. 86, 1138–1141.

    22. Schmechel, D. E., Burkhart, D. S., Ange, R. & Izard, M. K. (1996) Exp. Neurol.142, 111–127.

    23. Kirkpatrick, L. L. & Brady, S. T. (1999) in Basic Neurochemistry: Molecular,Cellular, and Medical Aspects, eds. Siegel, G. J., Agranoff, B. W., Albers, R. W.,Fisher, S. K. & Uhler, M. D. (Lippincott–Raven, Philadelphia), 6th Ed., pp.155–173.

    24. Raine, C. S. (1999) in Basic Neurochemistry: Molecular, Cellular, and MedicalAspects, eds. Siegel, G. J., Agranoff, B. W., Albers, R. W., Fisher, S. K. & Uhler,M. D. (Lippincott–Raven, Philadelphia), 6th Ed., pp. 3–30.

    25. Roediger, B. & Armati, P. J. (2003) Neurobiol. Dis. 13, 222–229.26. Gildersleeve, R. F., Cross, A. R., Cullen, K. E., Fagen, A. P. & Williams, R. C.,

    Jr. (1992) J. Biol. Chem. 267, 7995–8006.27. Naguib, Y. M. A. (2000) Anal. Biochem. 284, 93–98.28. Neely, M. D., Sidell, K. R., Graham, D. G. & Montine, T. J. (1999) J. Neuro-

    chem. 72, 2323–2333.29. Evans, E. & Needham, D. (1987) J. Phys. Chem. 91, 4219–4228.

    5266 � www.pnas.org�cgi�doi�10.1073�pnas.0504134103 Counterman et al.

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