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Andrea AGAZZI Scaling limits for Stochastic Chemical Reaction … · 2020-04-10 · At the...

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Tuesday the 18 December 2018 at 09:30 Politecnico di Torino, DISMA, Aula Buzano (third floor) Andrea AGAZZI Research associate at Duke University Scaling limits for Stochastic Chemical Reaction Network Dynamics Prof. Enrico Bibbona introduces the seminar Abstract In the domain of systems biology, the dynamics of arbitrary networks of chemical reactions are often modelled by mass action kinetics. At the microscopic level, these models consist of stochastic processes on discrete spaces, called jump Markov processes. When the volume of the reactor is large, i.e., in the limit of a large number of mo- lecules, such stochastic dynamics converge to the solutions of a set of algebraic ordinary dierential equations (called the fluid limit). Fluctuations around the asymptotic trajectories can in principle be studied through large deviations theory in path space, also called Wentzell-Freidlin (W-F) theory. In this talk, Dr Agazzi will first review the class of models under investigation and their large-volume scaling pro- perties. He will then highlight connections between the structure of the network and the asymptotic behaviour of their fluid limit trajectories. Finally, he will formulate some relevant theorems in W-F theory, giving sucient conditions for their application. This is joint work with Amir Dembo and Jean-Pierre Eckmann. Biography Andrea Agazzi is Research Associate at Duke Univerisity. Andrea received a Bachelor Degree in Physics from the ETH Zurich in 2012 and a Master Degree in Theoretical in Mathematical Physics from the Imperial College in 2013. In 2017, obtained a PhD in theoretical physics at the university of Geneva in collaboration with Stanford Univer- sity. During this period he studied the mathematical aspects of mass action kinetics models. More info on www.polito.it/disma-excellence
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Page 1: Andrea AGAZZI Scaling limits for Stochastic Chemical Reaction … · 2020-04-10 · At the microscopic level, these models consist of stochastic processes on discrete spaces, called

Tuesday the 18 December 2018 at 09:30Politecnico di Torino, DISMA, Aula Buzano (third floor)

Andrea AGAZZIResearch associate at Duke University

Scaling limits forStochastic Chemical Reaction Network Dynamics

Prof. Enrico Bibbona introduces the seminar

AbstractIn the domain of systems biology, the dynamics of arbitrary networks of chemical reactions are often modelled bymass action kinetics. At the microscopic level, these models consist of stochastic processes on discrete spaces,called jump Markov processes. When the volume of the reactor is large, i.e., in the limit of a large number of mo-lecules, such stochastic dynamics converge to the solutions of a set of algebraic ordinary di�erential equations(called the fluid limit). Fluctuations around the asymptotic trajectories can in principle be studied through largedeviations theory in path space, also called Wentzell-Freidlin (W-F) theory.In this talk, Dr Agazzi will first review the class of models under investigation and their large-volume scaling pro-perties. He will then highlight connections between the structure of the network and the asymptotic behaviourof their fluid limit trajectories. Finally, he will formulate some relevant theorems in W-F theory, giving su�cientconditions for their application.This is joint work with Amir Dembo and Jean-Pierre Eckmann.

BiographyAndrea Agazzi is Research Associate at Duke Univerisity. Andrea received a Bachelor Degree in Physics from theETH Zurich in 2012 and a Master Degree in Theoretical in Mathematical Physics from the Imperial College in 2013.In 2017, obtained a PhD in theoretical physics at the university of Geneva in collaboration with Stanford Univer-sity. During this period he studied the mathematical aspects of mass action kinetics models.

More info on www.polito.it/disma-excellence

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