Date post: | 04-Jan-2016 |
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ARCHIVING A COMPLEX DATASET:IST-3 A CASE STUDY
by Jonathan Drever
Third International Stroke Trial
“The benefits and harms of intravenous thrombolysis with alteplase within 6 h of acute ischaemic stroke”
• 3035 Patients from 156 Hospitals in 12 Countries• Baseline, 7 Day, 6m and 18m CRFs• Pre and Post Randomisation Brain Imaging
IST-3 Results
Favourable shift; adjusted common odds ratio 1·27 (95% CI 1·10- 1·47), p=0·001 or, the odds of surviving with less disability were 27% greater for patients treated with rt-PA
ChallengesCore Data (CRFs)
Scan Housekeeping
DICOM Imaging Imaging
Reviews
Sub- Study
Sub- Study
Sub- Study
Data Eccentricities• Legacy Data
• Blinded / Startup Phase of the trial• Paper Scan reads• Empty fields• Pre and Post Calculated Values
• Duplicated Data
• Administration Data• Form sent and received dates• Centre activation dates
• Missing Data• Form version change• NULL, 9 and Unknown
Documentation
1. Plain English
2. Bullet Points
3. The Devils in the Detail
Annotated Form
Form Versions
Creating a Basic Dataset
• Benefits• Simpler to understand and analyse• Cleanest most complete data • Snapshots• Concentrate your efforts
• IST-3 Dataset• Up to 6m• Very limited scan data• Used for main trial paper and further meta-analysis• More use in future…?
Archiving (Paper)
• Long Term store (15yrs)• Resources (where?)• Huge amounts of paper (114 boxes)
• Only 1 box was the electronic files
Archiving (electronic)
• Bringing it all together• Investigation• Cleaning• Documentation• Basic Dataset
• Archiving Catalogue• All the electronic repositories• Rough view of contents• Points to more detail
Archiving (Technicalities)
Next Steps
• 2nd Round of Archiving
• Further Analysis
• Data Sharing• Updated ‘Basic Dataset’• What documentation is needed?• Where will it do? (Edinburgh DataShare)• Who will get access?
Take Home Messages
• Planning early
• Simple documentation
• Value of a basic dataset
• Factor in your resources
• Be pragmatic
• Its not just for Archiving