Supplementary material
Supplementary material 1. Analysis of chromosomal duplication of HVA genes in the genome of C. clementina. Duplication between chromosomes 3 (CcHVA22c) and 4 (CCHVA22b) is indicated in red.
Supplementary material 2. Nucleotide sequences of HVA22s from C. clementina and C. sinensis from the Citrus Genome Database. 5’ and 3’ UTR are indicated in green and exons in red. Intron are indicated without any colour.
CcHVA22a>Ciclev10029342m scaffold_8: 4475087..4477963-GACGCTTAATCCGGCCCTACCATCCCCACAACCCCGGTCGGGTGAAATTG AACCCGGTTCAAATTTCCACCCTTGCGCATTGCGATCCGATCTCGACAAA TGGCAACAATCAATCGCGGCCTTCAAATCAAATCTTTTTGCTTCGCAGTT TTCTGCGTATTGAATTAATGGCTCTCTCAGGCGAGGTTAGTGATCCTATA GTTGATTCTTAATATCTCTAATATTTCTTGTATTCTATTTTTTTAATTTG TTCTATTTTTATCTCGAATTGGGGTTTTTACTTCCACCATGCGCTTTTTG AATGAATAAAGAAATTTTAATTATTACTCAAAAATCTGCATAGAAAACAA TCGATTACCGAATTCATTTTTGGCATGATTATTAATTCGTAAACTCTCTC TCGAATCAGGTTGGTTTGCGATTGCTTCTTTGCCCAATTGGCTCTAACATTGTTGTCCGCACAGCATGGTGAGTCCCAAACTGTTTTCAAGATCTGAGGT CTATTTGTTATTGGAAAATTTTATTAATTTATGAATGGGAAAATTAAATA TGCTTTGCTAATTGTAATGTCTGTGCCTTTTACAGTTGTTCGGTTGGGAC GATTTTGCCGGTTTACTCGACTTTTAAAGCTATTGAGAGCAAAGATGAAA ATGAGAAACAAAAGTGGCTTGTTTATTGGGCTGGTTCGTCATTTTTAGAA AATCCAATTTTGTTTTGTCTCCCAAATAAATTAGTATGATATGATTTTTT ATGTTTTAATAATTGACTGAAGATACACGAGTCTTTTAAAAAATGTCTTG TTTATCGACCTGGTGTCTGATCTATGATTAGCTTTGCCTGTCATATGTAG CACATTGGTAAATATATGATGTCTTTTTATAATTTCTTCTTATACTTCAT TTTGAATACTGTCAACTGCTTGCAGTTTATGGATCTTTTAGCATTGCGGA AATGTTTGCTGACAAGATACTCTGCTGGTATGTTGTTGTTGTTTTTCTTT TTTTCTTTTTTCCCTTTCCTGGTTACAATGGCCTAAGGAGATTAAGGGTA TTGATTGTCTTTTGATTCAACTTGCAAGATAAGTTTTTAATCCTCTGGCC TTCTGCTGTGGGAAGACTTTTCTTAGAATTCCATGCTTCATTTGATGATG GACATGCACAGTTGCTCTTTTTTTTGCTTGCTTACGCTTTAAGAGCATGA CGCTAGTTTTAGAATGTTGAGTTTGCTCTCATTCCAGACGTTGCAGTTAA GGAATCTCCTTTTTCCTTGTTTCATCAGGTTTCCGCTTTACCACCATGTG AAGTTTGCATTTCTGGTTTGGCTACAACTTCCATCTACCAATGTAAATTT GCTCTAGCTTCTACTCTACAGTTTTTTTATCTTTTAATTTTTGGCATGCA TTGCTGCTCCAAGGTACCGTGGTTATTGATCTGAATTAGACTCGTCCTGC CTGATGGAATTTGGTATTCCTTACAAGTTGGCTATTATTCCCAGCATTTA GCTGTTTATTTGGAAATTTTTAGAGTTTCGTTTTCTCAAATGGCATATTT CAACAGAATTTGTTAATAATTTCGATTGCTTTTTTGGTGGAATAACTGCT TGTGTTATAACAGGGAGCGAAATATTTTTATATGAGTCGTTTGCGCCCAT TTCTATTGAGACATCAAGCTAGACTTGATCAAATACTGGAGTCTGTAAAT GGTGAAATGGTAAGAACTTGTGATTTCAAATTATGATAGAGGATGTAATT TACATGATATTTTGCATTTGTCATGTCACTCTATTTGCTAATTTAGATCT GGAGACCAATAGAAAAATAATATGACTACCAAGTTCGAAAGTTTTAATAG ATCGCTGGTGCTGCAGAGTCAATTTGTCAGTGATCATCAAGTTGAATTCC GGTTTGTGAGGACGCTCTTTATGAAAACTGTGGCATTAGGTAAGAATTCC GACTATTTTGGTGTTATTCCATACTGAATATTAGACTTTAATGTTCATTC TAAGCGATCCTATATTCTGCATATTTAAGATATTCTGACGTTTCATTTTA GTCATTCATTTGATTTGGTTATCTTTGTTGTGTAGTCGTTTATTTAATTT CTGCATAATTACCTGCCAAATTACATTTTTTTTGAGAACCGGATTTACTG ACGGCTCTGTAGTAATGGATTTCGTTGATATATGTAGAACAGCAGAGGTC AACCTTAGCTCATCTTTTGTCTGTGCATCTTTATGTTGTATTCACTTCTG CGCTTTATTTTCCTTAAATTTGTCATCATGTCTATTTTCTGATTTCTTTT CTTTCTTAATCAGTGAACCAAACTGTTAAGGAGATTATTCATCCTGTGCC AACACAAGCAAATCGAGCTATTGAAGGCCCACCAGAATCAATTCCAGATT CTCAGTCAGACAACGAAGACTGACAAATAGTTCCTAACAAGCACAAAGTT GTTCAATCTTCTTCTTATCAGAAAATTTTGTATTTTCCTGGAGTGGATGG ATAGTTAACATCTTTCTTGTGCTAGGAAGATAGTTTCATCTTTGTTGTAA ATAAGTTAGATAAGTTTTTGATCTTGAGATAAGATATGTCTTAGTGGAAC TGGCCTAACTTGTTTGAGTTGCCTTGGTCTAAATAGGCGGCTTAGAAACA TGAGCTGTAAAAGTTACTCCCGTCAAGTAGCCTACTAGTCTTGTGGTTTT ACTACATGTGCATAACATATACAAAAATGTTTGTGCAACCAAATAATGGG CAGTTTTGGTGGGAATGCTGTTGTGCTTGTCTGGAACAATTCATGCATTT CTGCAGGGTAAAACAGTAGTGCTGGTGTTTGTATGTATACAGGTTTCTGA AATGATATTTCGAATACTGAATCTTGT
CcHVA22b>Ciclev10033698m scaffold_4: 23784491..23786546-
ATGCAGAATTTTGCATGTGCTACATTGCTGCATTGGTTACTACTTGCACT GAATCCATATATTAAGGGCTCGGAAACGAATGCAAGTATGTGGTAGCATT GCGCGGACCTTAGTATGGCTGGCCTTCGTTAGTCAAAACAGAACATTAGT GAATTCTGTGTGACTCTTTGTTTGGTTTTGTTTTGTTTGATACATACATA AACAATTCAAGATATATAGATGGAGGCTGTGATTTTTTGGCTTGTTACAT AAACCAAAAAGTAGGAATTAGCATTCGACACCACCCACAAGCAATAATTC TTAATAATTTCACAAACAGTAGTAGCTTTAAATCCGTGTCATCTGCATCA TCATAACAGCAACAAACAACTCAAAAAGAGGTGAGAACAGTGGCTCATAT GTCATATCCGCAGGGCCAAAGAAAAAAGTTGGGCTGAAATCAGATTTTTG GGGATCGAGCCTCAGGGTCCCCTTGTTCAATTTCGTCAAACTTGCCAGGA AAAATCACTTCGAGGCTCTTGGTCCTGTAAACTCCATCGCACCTAATACTCAGAAGGTTAACATATATTTATTTGCCACATCAAACACAAGCGCCATCGT ATGTGCTATTCCTGACGTGGCAAGCAATGATTGATGCATTTGAGTGGAAG CTCTTGTGGTAGCTGCGTACGAGATAAAATTAAAAAATTCGGTGCCTCTG TCCTTGTGCAACGTAACATTAGATTCTCCGCAAATTGTGTTTCCAATTAG TGTTATATAGAGAGCGCTTTATCTACTTTTCCTATTCTGCTTTCTGCCTT CCTTCTCTGCTTTTAAGTTCCCACCTTTCGCACTTTAAATTGTTTAGTGA GTTGGTATCTAAGTTTTTACGTTTTTACGCACAAAAGAGCCAGACAAACA AAGGAAGACACTTGAAGCAACTGATGGGTGCTCGTGGTTCTAATAATAAT AATTTTCTCCAAGTTGTTGTTAATAACTTCGATGTTCTTGCGTTGTATGT CTCTTTTTACTGTCTTAGCAGTTCTTGATTGAATTTAGTCTAAAAAATTA GATATATAATGTACATGTTACGCTTAATGGTTAATTCAATTATTGTGCTT GTTTTGCTCTGCACTAAGTCAAATTCGTGGTTTTTGTTTGCAGGCCTGTGGTTACTCTTGTTTATCCTCTGTAAGTTGGTTATTTTTTTGTCTACCTTAA GCTATAATGTGATGTAATTGAATTTGAAGCCAAACTTTTATATGGGTTGTGTTATTTTTAACAGACATGCTTCTATTAAAGCTATAGAGGCAAGATCTGC TTCCGATGACCAGCAATGGCTTACTTATTGGGTTCTTTATTCAATGATCA CACTCTTTGAACTCACTTTCGCTAAAGTCCTTGAACTGTAAGCCTGCTTT ATATGGTTCTGAAACCTTTTTTTTTCCTTGAAATATGTGCTTGTCATTTG ATAAATTTGCCGAATAATTAACTTGGTATTGGTTTTTTTTTTTTTTGAGC AATCATATTTAAGCCCTAAACATGTGTGGTAATTTTCTCTACAGAGAATT TTTAGATATGTTTATTTAATTTCCGGCTTCTTAATGTCTGCAGGATCACC ATATGGCCTTATGCTAAGCTGATTTTTTCGTGCTGGCTGGTTTTACCACA ATTCAATGGGGCAGCATATGTATATCGGCACTTCGTTAGACCTTTCTACA TGAACCCACAAAGTGCAAGCTCTAAAATATGGTATGTACCGCGGAAGAAG AATATCTTCAGACAACAAGATGACATTCTTACTGCTGCCGAAAAGTACAT GCAAGAGCATGGAACTGAGTCATTTGAAAGGCTTATTGCAAAGGTAATGG CTAAAATATATGAGACAGTCTTATGAGTCTAGTGTCTATAGGACTAATAA GTTGAAGGGTAGCCATTGCTCTGATTCCGGCTGTTATATTGTCCAAATTT AACACTTCAGGATCATAATTATTTGTTTTATTTGCAGACTGAAAGAGAAG AAAGATCCAGGAAGAGCAACAATTACATGATCTTTGATGATGATTATAGA TATTGA
CcHVA22c>Ciclev10022553m scaffold_3: 2110308..2113166 +GGTGGAATACTTGCTGCATCAGGAACTCAGTTGTACCCTACTCGTCCTTT TTCTCGAAAAACAAAGTAATTGGAGTTTAGGGGCTGCGTTGCAAGAACTT GACAAATCAGCTTTAACGTTTAATCATATTTAACAACTCCGCGAAGCACC CAATATTTATCCCGCAACCGGCTTTTGGCTCTTTTGTAAAAACATTTTAT ACTGCTTTTTGCGCTCTTGTCCGCTTTTCCTTTTCCTCTCTTAAACAGAA AACAGCAACCACAGTCTGACTAGAAAAACCAAAAAAAGCTTGTAACTTAG GCAAATATTTCGAGATCAGAACAAGCTAAATAAACGAGGAAAACGCTTTGAAGATCAGATATGGGATCTGGGGCTGGAAGCTTCTTAAAAGTTTTACTTA AGAACTTTGATGTTCTTGCTGGGTATGCATATTTCTCTTTCTCAAAGTTT GAGATTTTTCAACAATTTGGTTCGGTAATCCTGGAAAATGAAAAATACAG TTTTAGGGTTTCAATAACAAGACCTTTCGTTAACGGGTACCGTGAATAGA ACTCACTGATATCATTTGATGTTCTTGCTTGGGAGATTTTTCTTGTGAAT GGAATTTTTTTCCCTGTTTTTATTATGTAGGTCAATTAGATGGCGCTATT TTTTTCCCTTTACTACTAGATTCTTCTATTTGACATTAATGTGAGGCAAC CTCAAAGTTGAAATTTTTTCGCCTAGGATAAACTCTCTCCGAACTAATTT GGTCTAGTACAAACGGAATCATTGTCAATTGAAAACAGGCATTTTTTAAT TTTTTTTTTTATATTCGCGTTAATTTGGTAAATGCTGTGCTTTTTAAGGA TTATATTCTAATTTAATTTCTGGCTTTTGTATTGCAGGCCTGTGGTCAGTCTTGTTTATCCTCTGTAAGAGCGCCATCTAATTCTTTATCATTTTATTTT AGTGAAATTGTAGCAACCTCGATTTTATTGTTTTAGCTTTCCTGCTTATA TGTATTATGCTGTGTTTAGACGATCAATCCTTTTGATGGCTACTTGTGTT ATTCCTTGTTTAAGATTAATATGGGTGTTTTTTTTCATTTGGGTCATCTT
CTCAGGTATGCCTCTGTTAGGGCAATTGAGACCAAGTCTCCTACTGATGA CCGGCAATGGCTTACTTACTGGATTCTCTATTCTATGATTACCCTTGTTG AACTCACCTTTGCCAAAGTCATTGAATGGTAAAAATCTTGCTCTTTGCCT ATCTATCTCTCTGTCTGTCTTTTTAGCCAAGTCCGTTAAATGTGTTCCAT TCTTAATTTGAGGCTTAGTTTCTTTTTATTTGGATTTTTCTTGTTCTATT TTAAGTATCTCCTGTAGTTTGTTACAAAATACAGAGTTTCCCAAGCAAAT AAAAATGTCACGTGTATACCCATACAATTTTTCCAAAACCACTGCTATCT ATTTGTGAGGCAAAAAAAAAAAAAATACTTTGTTTCAGTTGACTAACTAA TGAAAAATTGGTTATTGAGCCCATACATTCGACCAAAATTTAACAGAATA GCAATTTTCTCAAAAAATGTGCCTTTCTACCATTATCAAAGTATATATTT TCCAAAAACATATAAATTGATCCTTGTTCTCTCGATGTCTTGATGCAGTT ATTGCATTATGTAAACTTGTAGATTCTATTCTGTTCTCCAAGAAATAATT CAAAGAAAAACATATGGAGCCATCCAAAGATTCACATTGATGTAGTTTTT CCATGATTTCACCTCAAAATCTCCTGCTTGTTCTTTTAGCCATTCTAGAG AACTCTTTACTCTTAATTCAGTCGTGGGAAAAACAAAATGTGAGTATTGT AGTTCAAGCTATGATTTCAAATATCTCCAAGCCTCATAGGTTTGGTGGTT AGATTATGGTCGGTACACCTTATCTTGCAGGGATTCTTTATGACATAATT GCTTCTTAATTTATTCACAATTGTAGAGTAGCAGGAGCAGATATAGAGTC TAATCTAAACCCTTTGTGGCAGGATTCCTATTTGGTCGTATGCAAAGCTG ATTTTTACCTGCTGGCTGGTCATCCCGCAATTCAGTGGTGCTGCATATGT TTATGAGCATTATTTGAGACCTTTCTTTCTCAACCCTCAGACTATTAACA TCTGGTATGTCCCAAGAAAGAAGGATGTCTTCAGTAGGCCAGATGATATT CTTACTGCTGCAGAGAAATATATGGAAGAGAATGGGACAGATGCTTTTGA GAAGCTCATTCACAGGGTATGCCATCTTTGACAATCATTTTCCACGTACT AGGTCCTAAACTCGTATATTGATGATAAAATTTATTAAAAGAAAGAGAAA AAAAAGAAGTATCCTCTGGAATTGAGGAAATCATGTTGTCTCTACTTGGC ATCAAGCAAATCGGATGGTGTTATATTATAGAACCAATGGTTTTTCTTTG AAGACAATATTTTTCCACCACTTGCTTATCATTTTTCTCTTGTTCTTCAGGCTGACAAGTCGAAGAGGAATTACGACCACTCTACTTACGAATATGACAA TGTTTATTGAGTTTCATGGCCCGTGTTGAGTTGCGTGGCAGCAGAATGAA AAAGACGTCTTTACTGTTACTATAATGCTTTTTGTTGTGGATACTTTTCC TCTTGTGTTGCAGACTTTTTTTTTTATTTTTTATTTTTATTTTGGGGTTT TGTAAGAGAACTGAATGCTGTATAAGATTAAACGCTGTAATTATAATAGT TTGTGTTGCTTTTTCACTAATTTTCTTATGTTTCGTGGAGGATTAAGAGT CTGTTTGGTATGACTTATTTAAGAGCCATAAGTGCTTATTTAATTGTATAAGTGCTTTT
CcHVA22c*>Ciclev10022663m scaffold_3: 2110308..2113166 +GGTGGAATACTTGCTGCATCAGGAACTCAGTTGTACCCTACTCGTCCTTT TTCTCGAAAAACAAAGTAATTGGAGTTTAGGGGCTGCGTTGCAAGAACTT GACAAATCAGCTTTAACGTTTAATCATATTTAACAACTCCGCGAAGCACC CAATATTTATCCCGCAACCGGCTTTTGGCTCTTTTGTAAAAACATTTTAT ACTGCTTTTTGCGCTCTTGTCCGCTTTTCCTTTTCCTCTCTTAAACAGAA AACAGCAACCACAGTCTGACTAGAAAAACCAAAAAAAGCTTGTAACTTAG GCAAATATTTCGAGATCAGAACAAGCTAAATAAACGAGGAAAACGCTTTG AAGATCAGATATGGGATCTGGGGCTGGAAGCTTCTTAAAAGTTTTACTTA AGAACTTTGATGTTCTTGCTGGGTATGCATATTTCTCTTTCTCAAAGTTT GAGATTTTTCAACAATTTGGTTCGGTAATCCTGGAAAATGAAAAATACAG TTTTAGGGTTTCAATAACAAGACCTTTCGTTAACGGGTACCGTGAATAGA ACTCACTGATATCATTTGATGTTCTTGCTTGGGAGATTTTTCTTGTGAAT GGAATTTTTTTCCCTGTTTTTATTATGTAGGTCAATTAGATGGCGCTATT TTTTTCCCTTTACTACTAGATTCTTCTATTTGACATTAATGTGAGGCAAC CTCAAAGTTGAAATTTTTTCGCCTAGGATAAACTCTCTCCGAACTAATTT GGTCTAGTACAAACGGAATCATTGTCAATTGAAAACAGGCATTTTTTAAT TTTTTTTTTTATATTCGCGTTAATTTGGTAAATGCTGTGCTTTTTAAGGA TTATATTCTAATTTAATTTCTGGCTTTTGTATTGCAGGCCTGTGGTCAGT CTTGTTTATCCTCTGTAAGAGCGCCATCTAATTCTTTATCATTTTATTTT AGTGAAATTGTAGCAACCTCGATTTTATTGTTTTAGCTTTCCTGCTTATA TGTATTATGCTGTGTTTAGACGATCAATCCTTTTGATGGCTACTTGTGTT ATTCCTTGTTTAAGATTAATATGGGTGTTTTTTTTCATTTGGGTCATCTT CTCAGGTATGCCTCTGTTAGGGCAATTGAGACCAAGTCTCCTACTGATGA CCGGCAATGGCTTACTTACTGGATTCTCTATTCTATGATTACCCTTGTTG AACTCACCTTTGCCAAAGTCATTGAATGGTAAAAATCTTGCTCTTTGCCT ATCTATCTCTCTGTCTGTCTTTTTAGCCAAGTCCGTTAAATGTGTTCCAT TCTTAATTTGAGGCTTAGTTTCTTTTTATTTGGATTTTTCTTGTTCTATT TTAAGTATCTCCTGTAGTTTGTTACAAAATACAGAGTTTCCCAAGCAAAT AAAAATGTCACGTGTATACCCATACAATTTTTCCAAAACCACTGCTATCT
ATTTGTGAGGCAAAAAAAAAAAAAATACTTTGTTTCAGTTGACTAACTAA TGAAAAATTGGTTATTGAGCCCATACATTCGACCAAAATTTAACAGAATA GCAATTTTCTCAAAAAATGTGCCTTTCTACCATTATCAAAGTATATATTT TCCAAAAACATATAAATTGATCCTTGTTCTCTCGATGTCTTGATGCAGTT ATTGCATTATGTAAACTTGTAGATTCTATTCTGTTCTCCAAGAAATAATT CAAAGAAAAACATATGGAGCCATCCAAAGATTCACATTGATGTAGTTTTT CCATGATTTCACCTCAAAATCTCCTGCTTGTTCTTTTAGCCATTCTAGAG AACTCTTTACTCTTAATTCAGTCGTGGGAAAAACAAAATGTGAGTATTGT AGTTCAAGCTATGATTTCAAATATCTCCAAGCCTCATAGGTTTGGTGGTT AGATTATGGTCGGTACACCTTATCTTGCAGGGATTCTTTATGACATAATT GCTTCTTAATTTATTCACAATTGTAGAGTAGCAGGAGCAGATATAGAGTC TAATCTAAACCCTTTGTGGCAGGATTCCTATTTGGTCGTATGCAAAGCTG ATTTTTACCTGCTGGCTGGTCATCCCGCAATTCAGTGGTGCTGCATATGT TTATGAGCATTATTTGAGACCTTTCTTTCTCAACCCTCAGACTATTAACA TCTGGTATGTCCCAAGAAAGAAGGATGTCTTCAGTAGGCCAGATGATATT CTTACTGCTGCAGAGAAATATATGGAAGAGAATGGGACAGATGCTTTTGA GAAGCTCATTCACAGGGTATGCCATCTTTGACAATCATTTTCCACGTACT AGGTCCTAAACTCGTATATTGATGATAAAATTTATTAAAAGAAAGAGAAA AAAAAGAAGTATCCTCTGGAATTGAGGAAATCATGTTGTCTCTACTTGGC ATCAAGCAAATCGGATGGTGTTATATTATAGAACCAATGGTTTTTCTTTG AAGACAATATTTTTCCACCACTTGCTTATCATTTTTCTCTTGTTCTTCAGGCTGACAAGTCGAAGAGGAATTACGACCACTCTACTTACGAATATGACAA TGTTTATTGAGTTTCATGGCCCGTGTTGAGTTGCGTGGCAGCAGAATGAA AAAGACGTCTTTACTGTTACTATAATGCTTTTTGTTGTGGATACTTTTCC TCTTGTGTTGCAGACTTTTTTTTTTATTTTTTATTTTTATTTTGGGGTTT TGTAAGAGAACTGAATGCTGTATAAGATTAAACGCTGTAATTATAATAGT TTGTGTTGCTTTTTCACTAATTTTCTTATGTTTCGTGGAGGATTAAGAGT CTGTTTGGTATGACTTATTTAAGAGCCATAAGTGCTTATTTAATTGTATA AGTGCTTTT
CcHVA22d>Ciclev10033011m scaffold_4:12717451..12718931 +ACGGGGCTAAATCTAGTTGGACACGTTGAAGGCAGAATCCGATACTGTCTCCCATCCTGCCACGTGTCTTAATCTCTCCAATATAAATAGCTAACCCATATAACAGGTCCACACAACTTTTGTCTTAATCCTAGAAACCATTTTCTCACTTGGCCATCACAGTCTTCTTCGATTCATCACTTTATTCATCAGTCAGTTTTTCTCAGTGTTTATTTACTACAGTATCCAAAAAAAAGAAAAATAAAAAATGAGTCGTTTCTGGAATTTGATCTATGGTGTTCATTCACTTGCAGGGTATTTTTTTGTTTTTTTTCATATTTTTACTCAAGTAAAAATCTTTTTGATATAATTTCTCTAATATCTGATCATAAAATATGTATGCAGGCCAGTTCTGATGCTGCTGTATCCCTTGTAAGTGATTGATTAATTTCTTTTCATTTTCTGTATTAATCCTGATTAGTAATTAATTAATTATCTAATTAATTGAGTGATCTGATAATAAAAGTGGGGTTCTGACTTCTGATACATATGCCAGATATGCATCAGTTGTGGCAATTGAGAGCCCATCAAAAGTGGATGATGAGCAGTGGCTTGCTTATTGGATTTTGTATTCATTTCTAACTCTTACTGAGATGGTACTCCAACCGGTTTTAGAGTGGTAAGTGAAACTAATAGATCATTTAATTTTTTTTTGGGGATTAATTAGTTTTTATATGTGACAAGTCATGTTATGAATAATTAAATTTTAGGATACCAATTTGGTACTCGGTGAAGCTAGTACTAGCGGCATGGCTGGTTCTGCCACAGTTCAGAGGTGCGGCTTTTATATATGAAAGGTTTGTCAGACAGCAAATTAGGCAGTACAGAGGAGGTAAAGATCATCATCAGCATCAGCATCGCAAGTCTTCTCCTACTGGCACTGGCAAGGGCAAGAACAAGTTTGTGGACTTTATTATGCCGAAGAAAGTAAGCTAATTAATTGGATTTGTTTTTTAAAAAATCGAATTTAAAATTAAAATTGGAGTTGTAAAATTTAGACGTCTGAACCTG AGCACGATTTAACTCTTAATGGATGTTACTGTTCTATATTGAAAGAATGAAGTAAAGTGTGAGTGAACAGAAGGAACTAAGATTTGTGTTGAATTTTCTA ATGAGATGTATTATTCAATTGGTTGTGTGCGGACAGGGGGAGCACGAGGCATACTAACCAACTACAAGAAAAGAAGAGACGATTCTCCGTTGGCTTGTGTTCGTGTGTCGAGCTTCTGTTGCTTTGTGCTTTGCTTTGCTTTTAGGTTAATCTTCTCTCTTGGTGATTGTTGTATAAAGGGAAGCTTTAACTTTTAACCCTGTACAAGTTTACAAGTTTGCGACTTTCAAAGCTTCTGTGACGCTTTAATGAAGAAATTAGTGATCATTTGAGGCCGCTCACTCTTTTTCGGCTTAGCAGTTTCTCACATGTCAGTCGTATAATAATAAAT
CcHVA22e>Ciclev10032960m scaffold_4: 16250557..16251633 +ACAGCAAATCAAATCATTTTAGCATTATCATTTCGATCAATCGGGAAAAT TAATCAAAAGAACATAACACTGCAATATGGGTGTTCTTGCAGTAATCGCTAAACGTTTGGATGCGCTGATCGGGTATTATSTATATTATTTATTTATTTA
ATAATTGCTCTTTTATATATATGAATGTTATATATAGTCTCTACATTTTTTCTCTTTTAAATCCTTCCCAAGAAATTAAATTTGATTTGTGTTTTGAACAGGCCAGGAGTTATGCTTCTTTATCCATTGTAAGTGAAAAGCGTTAAGTAAAAATTATTTTGTATTAAATGTAATAAAATGAACTATATAACATAATGAACTAGACGTTTAATTATTTGTATGGATATGAATGTACATACAGATACGCATCATTGCGAGCAATTGAGTCGCCTTCAACTCTAGATGACCAGCAGTGGCTGACGTACTGGATTATATACTCTTTCATAACCTTATTTGAGCTATCATGTTACAAAGTCCTCGCTTGGTACATATGCATGCTTCATTCTCATTAAGTGTTTATAGAATTGTATGTAAAATATCTACTAATTAATTAACCATGCATGCATGCAGGCTTCCATTTTGGGCATACATGAAGCTACTATTTTGCATGTGGTTGGTGCTGCCAATGTTCCATGGGGCAGCTTATATATATGAAAAGCATATAAGGAGATATGTAAAGATTGGTGGGTATGTGAGCCCATCATCAAATTATACGGCAGATCAGAGGAAGGTTCTTCAGATGATGAGCCTTGATGCTAGAAAATCAGTGTCTCAATATGTTGAGAAACATGGATGGGAAGCTGTCGAGCGGGCTATCAAAGCGGTAATTAATTACTGAATTAAAAAGTTAAACACATTTATATGCAGTGGCTCATCATATATATGTTTCGTGTTGTTTTTGCAGGCTGAAAAAGAAACAAAGAAGCGTTGAGGATCTCCAACTACGTCATCAGATCAGCCTCGCATTCTCTTCAATTATAACTCTTATGTAAAATGTAAAGATGGAAAGATGCCACGAGCTAGAGCATATATTCCAATTAATTAA
CcHVA22f>Ciclev10006951m scaffold_9:15605115..15606615TACATTTCATTGGAAACACTTGAGCGTCCTTCTGCGCCAGATTATAGACA ATGGATGACTTATTGGATTATATTATCACTTGTAACAACATTTGAGATGC TTTGTTGGAAAACTCTCGGTTGGTATGTCTAATCTCTACTCATTATTTTA TTATAAGGGTAAATGGTGGAACTCATGTAAATTGATGTTATCAAATTCTC TTAAATTTATGGAAAGCGTAAATTTCAAATTATTTTTCGTGAATTGACTA TTTTTAAATTACTCTCTTCACTTTTGAAAACTTGAAGTTATCTTCATTTT TGTTTATCTTCATTCACTTTCCAAACGTAAGACAGATTATTTAAAGATAG TCAACTCTTAAGGTGAGTAATCTCAAATTTATCCATTCGAATAAGTCAAT TTAAATGAAGGTTGAACAAACTGTACCCTTATTGCAATTATAAGTTAAAA AAATGAATAATTACACGCACACATTTTACAGAGATAAATTCTCCAAATT TTTTTATATGTTTCTAATTAATTTGATTGTGTGACAGGTTTCCGGTTCCT AATTTTATTTGGGCATACTTGAAGCTCTTGATTTTCGTATGGCTAGCTCT GCCAATTTTCAATGGGGCTTGTTTTTTCTATGAGAAATTCATAAGAGTTT
CsHVA22a>orange1.1g029734m scaffold00184: 263558..266375-CCCCACAACCCCGGTCGGGTGAAATTGAACCCGGTTCAAATTTCCGCCCT TGCGCAATGCGAACCGATCTCGACAAAGGGCAACAATCAATCGCGGCCTT CAAATCAAATCTTTTTGCTTCGCAGTTTTCTGCGTATTGAATTAATGGCT CTCTCAGGCGAGGTTAGTGATCCTTTAGTTGATTCTTATATCTCCAATAT TTCTTGTATTCTATTTTTTTAATTTGTTCTATTTTATCTCTAATTAGGGT TTTTACTTCCACCATGCGCTTTTTGAATGAATAAAGAAATTTTAATTATT ACTTAAGAATCTGCATAGAAAACAATCGATTACCGAATTCTTTTTTGTCA TGATTATTAATTCGTAAACTCTCTCTCGAATCAGGTTGGTTTGCGATTGC TTCTTTGCCCAATTGGCTCTAACATTGTTGTCCGCACAGCATGGTGAGTC CCAAACTGTTTTCAAGATCTGAAGTCTATTTGTTATTGGAAAATTTTATT AATTTATGAATGGGAAAATTAAATATGCTTTGCTAATTCTAATGTCTGCCTTTTACAGTTGTTCAGTTGGGACGATTTTGCCGGTTTACTCGACGTTTAA AGCTATTGAGAGCAAAGATGAAAATGAGAAACAAAAGTGGCTTGTTTATT GGGCTGGTTCGTCATTTTTAGAATATCCAATTTTGTTTTTGTCTCCCAAATAAATTAGTATGATATGATTTTTTATGTTTTAATAATTGACTGAAGATACACGAGTCTTTTAAAAAATGTCTTGTTTATCGACCTGGTGTCTGATCTATGATTAGCTTTGCCTGTCATATGTAGCACATTGGTAAATATATGATGTCTTTTTTAAATTTCTTCTTATACTTCATTTTGAATACTGTCAACTGCTTGCAGTTTATGGATCTTTTAGCATTGCGGAAATGTTTGCTGACAAGATACTCTGCTGGTATGTTGTTGTTGTTGTTTTTCTTTTTTTCTTTTTTCCCTTTCCTGGTTACAATGGCCTAAGGAGATTAAGGGTATTGATTGTCTTTTGATTCAACTTGCAAGATAAGTTTTTAATCCTCTGGCCTTCTGCTGTGGGAAGACTTTTCTTAGAATTCCATGCTTCATTTGATGATGGACATGCACAGTTGCTCTTTTTTTTGCTTGCTTACGCTTTAAGAGCATGACGCTAGTTTTAGAATGTTGAGTTTGCTCTCATTCCAGACGTTGCAGTTAAGGAATCTCCTTTTTCCTTGTTTCATCAGGTTTCCGCTTTACCACCATGTGAAGTTTGCATTTCTGGTTTGGCTACAACTTCCATCTACCAATGTAAATTTGCTCTAGCTTCTACTCTACAGTTTTTTTATCTTTTAATTTTTGGCATGCATTGCTGCTCCAAGGTACCGTGGTTATTGATCTGAATTAGACTCGTCCTGCCTGATGGAATTTGGTATTCCTTACAAGTTGGCTATTATTCCCAGCATTTAGCTGTTTATTTGGAAATTTTTAG
AGTTTCGTTTTCTCAAATGGCATATTTCAACAGAATTTGTTAATAATTTCGATTGCTTTTTTGGTGGAATAACTGCTTGTGTTATAACAGGGAGCGAAATATTTTTATATGAGTCGTTTGCGCCCATTTCTATTGAGACATCAAGCTAGACTTGATCAAATACTGGAGTCTGTAAATGGTGAAATGGTAAGAACTTGTGATTTCAAATTATGATAGAGGATGTAATTTACATGATATTTTGCATTTGTCATGTCACTCTATTTGCTAATTTAGATCTGGAGACCAATAGAAAAATAATATGACTACCAAGTTCGAAAGTTTTAATAGATCGCTGGTGCTGCAGAGTCAATTTGTCAGTGATCATCAAGTTGAATTCCGGTTTGTGAGGACGCTCTTTATGAAAACTGTGGCATTAGGTAAGAATTCCGACTATTTTGGTGTTATTCCATACTGAATATTAGACTTTAATGTTCATTCTAAGCGATCCTATATTCTGCATATTTAAGATATTCTGACGTTTCATTTTAGTCATTCATTTGATTTGGTTATCTTTGTTGTGTAGTCGTTTATTTAATTTCTGCATAATTACCTGCCAAATTACATTTTTTTTGAGAACCGGATTTACTGACGGCTCTGTAGTAATGGATTTCGTTGATATATGTAGAACAGCAGAGGTCAACCTTAGCTCATCTTTTGTCTGTGCATCTTTATGTTGTATTCACTTCTGCGCTTTATTTTCCTTAAATTTGTCATCATGTCTATTTTCTGATTTCTTTTCTTTCTTAATCAGTGAACCAAACTGTTAAGGAGATTATTCATCCTGTGCCAACACAAGCAAATCGAGCTATTGAAGGCCCACCAGAATCAATTCCAGATTCTCAGTCAGACAACGAAGACTGACAAATAGTTCCTAACAAGCACAAAGTTGTTCAATCTTCTTCTTATCAGAAAATTTTGTATTTTCCTGGAGTGGATGGATAGTTAACATCTTTCTTGTGCTAGGAAGATAGTTTCATCTTTGTTGTAAATAAGTTAGATAAGTTTTTGATCTTGAGATAAGATATGTCTTAGTGGAACTGGCCTAACTTGTTTGAGTTGCCTTGGTCTAAATAGGCGGCTTAGAAACATGAGCTGTAAAAGTTACTCCCGTCAAGTAGCCTACTAGTCTTGTGGTTTTACTACATGTGCATAACATATACAAAAATGTTTGTGCAACCAAATAATGGGCAGTTTTGGTGGGAATGCTGTTGTGCTTGTCTGGAACAATTCATGCATTTCTGCAGGGTAAAACAGTAGTGCTGGTGTTTGTATGTATACAG
CsHVA22a*>orange1.1g032614m scaffold00184: 264643..266375-CCCCACAACCCCGGTCGGGTGAAATTGAACCCGGTTCAAATTTCCGCCCT TGCGCAATGCGAACCGATCTCGACAAAGGGCAACAATCAATCGCGGCCTT CAAATCAAATCTTTTTGCTTCGCAGTTTTCTGCGTATTGAATTAATGGCT CTCTCAGGCGGTTAGTGATCCTTTAGTTGATTCTTATATCTCCAATAT TTCTTGTATTCTATTTTTTTAATTTGTTCTATTTTATCTCTAATTAGGGT TTTTACTTCCACCATGCGCTTTTTGAATGAATAAAGAAATTTTAATTATT ACTTAAGAATCTGCATAGAAAACAATCGATTACCGAATTCTTTTTTGTCA TGATTATTAATTCGTAAACTCTCTCTCGAATCAGGTTGGTTTGCGATTGC TTCTTTGCCCAATTGGCTCTAACATTGTTGTCCGCACAGCATGGTGAGTC CCAAACTGTTTTCAAGATCTGAAGTCTATTTGTTATTGGAAAATTTTATT AATTTATGAATGGGAAAATTAAATATGCTTTGCTAATTCTAATGTCTGCC TTTTACAGTTGTTCAGTTGGGACGATTTTGCCGGTTTACTCGACGTTTAA AGCTATTGAGAGCAAAGATGAAAATGAGAAACAAAAGTGGCTTGTTTATT GGGCTGGTTCGTCATTTTTAGAATATCCAATTTTGTTTTTGTCTCCCAAATAAATTAGTATGATATGATTTTTTATGTTTTAATAATTGACTGAAGATACACGAGTCTTTTAAAAAATGTCTTGTTTATCGACCTGGTGTCTGATCTATGATTAGCTTTGCCTGTCATATGTAGCACATTGGTAAATATATGATGTCTTTTTTAAATTTCTTCTTATACTTCATTTTGAATACTGTCAACTGCTTGCAGTTTATGGATCTTTTAGCATTGCGGAAATGTTTGCTGACAAGATACTCTGCTGGTATGTTGTTGTTGTTGTTTTTCTTTTTTTCTTTTTTCCCTTTCCTGGTTACAATGGCCTAAGGAGATTAAGGGTATTGATTGTCTTTTGATTCAACTTGCAAGATAAGTTTTTAATCCTCTGGCCTTCTGCTGTGGGAAGACTTTTCTTAGAATTCCATGCTTCATTTGATGATGGACATGCACAGTTGCTCTTTTTTTTGCTTGCTTACGCTTTAAGAGCATGACGCTAGTTTTAGAATGTTGAGTTTGCTCTCATTCCAGACGTTGCAGTTAAGGAATCTCCTTTTTCCTTGTTTCATCAGGTTTCCGCTTTACCACCATGTGAAGTTTGCATTTCTGGTTTGGCTACAACTTCCATCTACCAATGTAAATTTGCTCTAGCTTCTACTCTACAGTTTTTTTATCTTTTAATTTTTGGCATGCATTGCTGCTCCAAGGTACCGTGGTTATTGATCTGAATTAGACTCGTCCTGCCTGATGGAATTTGGTATTCCTTACAAGTTGGCTATTATTCCCAGCATTTAGCTGTTTATTTGGAAATTTTTAGAGTTTCGTTTTCTCAAATGGCATATTTCAACAGAATTTGTTAATAATTTCGATTGCTTTTTTGGTGGAATAACTGCTTGTGTTATAACAGGGAGCGAAATATTTTTATATGAGTCGTTTGCGCCCATTTCTATTGAGACATCAAGCTAGACTTGATCAAATACTGGAGTCTGTAAATGGTGAAATGGTAAGAACTTGTGATTTCAAATTATGATAGAGGATGTAATTTACATGA
CsHVA22b>orange1.1g030361m scaffold00003: 2901953..2903363-
GTTTAGTGAGTTGGTATCTAAGTTTTTACGTTTTTACGCACAAAAGAGCC AGACAAACAAAGGAAGACACTTGAAGCAACTGATGGGTGCTCGTGGTTCT AATAATAATAATTTTCTCCAAGTTGTTGTTAATAACTTCGATGTTCTTGC GTTGTATGTCTCTTTTTACTGTCTTAGCAGTTCTTGATTGAATTTAGTCT CAAAAATTAGATATATAATGTACATGTTACGCTTAATGGTTAATTCAATT ATTGTGCTTGTTTTGCTCTGCACTAAGTCAAATTCGTGGTTTTTGTTTGC AGGCCTGTGGTTACTCTTGTTTATCCTCTGTAAGTTGGTTATTTTTTTGT CTACCTTAAGCTATAATGTGATGTAATTGAATTTGAAGCCAAACTTTTAT ATGGGTTGTGTTATTTTTAACAGACATGCTTCTATTAAAGCTATAGAGGC AAGATCTGCTTCCGATGACCAGCAATGGCTTACTTATTGGGTTCTTTATT CAATGATCACACTCTTTGAACTCACTTTCGCTAAAGTCCTTGAACTGTAA GCCTGCTTTATATGGTTCTGAAACCTTTTTTTTTCCTTGAAATATGTGCT TGTCATTTGATAAATTTGCCGAATAATTAACTTGGTATTTGGTTTTTTTT TTTTTGAGCAATCATATTTAAGCCCTAAACATGTGTGGTAATTTTCTCTA CAGAGAATTTTTAGATATGTTTATTTAATTTCCGGCTTCTTAATGTCTGCAGGATCACCATATGGCCTTATGCTAAGCTGATTTTTTCGTGCTGGCTGGT TTTACCACAATTCAATGGGGCAGCATATGTATATCGGCACTTCGTTAGAC CTTTCTACATGAACCCACAAAGTGCAAGCTCTAAAATATGGTATGTACCG CGGAAGAAGAATATCTTCAGACAACAAGATGACATTCTTACTGCTGCCGA AAAGTACATGCAAGAGCATGGAACTGAGTCATTTGAAAGGCTTATTGCAAAGGTAATGGCTAAAATATATGAGACAGTCTTATGAGTCTAGTGTCTATAGGACTAATAAGTTGAAGGGTAGCCATTGCTCTGATTCCCGCTGTTATATTGTCCAAATTTAACACTTCAGGATCATAATTATTTGTTTTATTTGCAGACTGAAAGAGAAGAAAGATCCAGGAAGAGCAACAATTACATGATCTTTGATGATGATTATAGATATTGAACTTCTGTATCCATTGACGTTTTCAGTTGTATTGCGATGGAAAATGCTACCCTTAGTGATAGTACCTATCTTCAAGAACGAAATGCTCTGTCACCGTTGGCTATTGGGACACAGTGTCTCTTCTCACTGCTTGGCTTGCTAATTTGATTCTGCTTAGCATTGTACCTCTTTCAGGCAAAATGGTGCAAGAATTCAT
CsHVA22b*>orange1.1g031732m scaffold00003: 2901953..2903029-TTGGTTATTTTTTTGTCTACCTTAAGCTATAATGTGATGTAATTGAATTTGAAGCCAAACTTTTATATGGGTTGTGTTATTTTTAACAGACATGCTTCTA TTAAAGCTATAGAGGCAAGATCTGCTTCCGATGACCAGCAATGGCTTACT TATTGGGTTCTTTATTCAATGATCACACTCTTTGAACTCACTTTCGCTAA AGTCCTTGAACTGTAAGCCTGCTTTATATGGTTCTGAAACCTTTTTTTTT CCTTGAAATATGTGCTTGTCATTTGATAAATTTGCCGAATAATTAACTTG GTATTTGGTTTTTTTTTTTTTGAGCAATCATATTTAAGCCCTAAACATGT GTGGTAATTTTCTCTACAGAGAATTTTTAGATATGTTTATTTAATTTCCG GCTTCTTAATGTCTGCAGGATCACCATATGGCCTTATGCTAAGCTGATTT TTTCGTGCTGGCTGGTTTTACCACAATTCAATGGGGCAGCATATGTATAT CGGCACTTCGTTAGACCTTTCTACATGAACCCACAAAGTGCAAGCTCTAA AATATGGTATGTACCGCGGAAGAAGAATATCTTCAGACAACAAGATGACA TTCTTACTGCTGCCGAAAAGTACATGCAAGAGCATGGAACTGAGTCATTT GAAAGGCTTATTGCAAAGGTAATGGCTAAAATATATGAGACAGTCTTATG AGTCTAGTGTCTATAGGACTAATAAGTTGAAGGGTAGCCATTGCTCTGAT TCCCGCTGTTATATTGTCCAAATTTAACACTTCAGGATCATAATTATTTG TTTTATTTGCAGACTGAAAGAGAAGAAAGATCCAGGAAGAGCAACAATTA CATGATCTTTGATGATGATTATAGATATTGAACTTCTGTATCCATTGACG TTTTCAGTTGTATTGCGATGGAAAATGCTACCCTTAGTGATAGTACCTAT CTTCAAGAACGAAATGCTCTGTCACCGTTGGCTATTGGGACACAGTGTCT CTTCTCACTGCTTGGCTTGCTAATTTGATTCTGCTTAGCATTGTACCTCT TTCAGGCAAAATGGTGCAAGAATTCAT
CsHVA22c>orange1.1g030780m scaffold00009: 384912..387534-GTACCCTACTCGTCCTTTTCCTCGAAAAACAAAGTAATTGGAGTTTAGGG GCTGCGTTGCAAGAACTTGACAAATCGGCTTTAACGTTTAATCATATTTA ACAACTCCGCGAAGCACCCAATATTTATCCCGCAACCGGCTTTTGGCTCT TTTGTAAAAACATTTTATGCTGCTTTTTGCGCTCTTCTCTGCTTTTCCTC TCTTAAACAGAAAACAGTAACCACAGTCTGACTAGAAAAACCAAAAAAAG CTTGTAACTTAGGCAAATATTTCGAGATCAGAACAAGCTAAATAAACGAG GAAAACGCTTCGAAGGTCGGATATGGGATCTGGGGCTGGAAGCTTCTTAA AAGTTTTACTTAAGAACTTTGATGTTCTTGCTGGGTATGCATATTTCTCC TTTTCAAAGTTTGAGATTTTTTAACAATTTGGTTCGGTAATCCTGGAAAA TGAAAAATACAGTTTTAGGGTTTCAATAACAAGCCCTTTCGTTAACTGGT ACCGTGAATAGAACCCACTGATATCATTTGATGTTCTTGCTTGGGAGATT
TTTCTTGTGAATGGAATTTTTTCTTTTTCCTTGTTTTTATTATGTGCTCC CTTTACTAAACTGAGACCGAATAGATATAAAAGATTCCACTATTTGACCT TAATGTGAGGCAACCTCAAAGTTGAAATCTTTTCGCCTATGATAAACTCT CTCCGAACTAATTTGGTCTACTACAAACGGAATCATTGTCAATTGAAAAC AGGCATTTTTTTAATTTTTTTTTCTATACTCGCGTTAATTTGGTAAATGC TGTGCTTTTTAAGGATTATATTCTAATTTAATTTCTGGCTTTTGTATTGCAGGCCTGTGGTCAGTCTTGTTTATCCTCTGTAAGAGCGCCATCTAATTCT TTATCATTTTATTTTAGTGAAATTGTAGCAACCTCGATTTTATTGTTTTA GCTTTCCTGCTTATATGTATTATGCTGTGTTTAGACGATCAATCCTTTTG ATGGCTACTTGTGTTATTCCTTGTTTAAGATTAATATGGGTGTTTTTTTC ATTTGGGTCATCTTCTCAGGTATGCCTCTGTTAGGGCAATTGAGACCAAG TCTCCTACTGATGACCGGCAATGGCTTACTTACTGGATTCTCTATTCTAT GATTACCCTTGTTGAACTCACCTTTGCCAAAGTCATTGAATGGTAAAAAT CTTGCTCTTTGCCTATCTATCTCTCTGTCTGTCTTTATAGCCAAGTCCGT TAAATGTTTCCATTCTTAATTTGAGGCTTAGTTTCTTTTTTTGGAATTTTCTTGTTCTATTTTAAGTATCTCCTGTAGTTTGTTACAAAATACAGAGTTT CCCAAGCAAATAAAAATGTCACGTGTATACCCATACAATTTTTCCAAAAC CACTGCTATCTATTTGTGAGGCAAAAAAAAAAAAATACTTTGTTTCAGTTGACTAACTAATGAAAAATTGGTTATTGAGCCCATACATTAGACCAAAATTTAACAGAATAGCAATCTTCTTGAAAAATGTGCCTTTCTACCATTATCAAAGTATATATTTTCCAAAAATATATAAATCGATCCTTGTTCTCTCGATGTCT TGATGCACTTATTGCATTATGTAAACTTGTAGATTCTATTCTGTTCTCCAAGAAATAATTCAAAGAAAAACATATGGAGCCATCCAAAGATTCACATTGA TGTAATTTTTCCATGATTTCACCTCAAAATCTCCTGCTTGTTATTTTAGC CATTCTAGAGAACTCTTTACTCTTAATTCAGTCGAGGGAAAAACAAAATG TGAGTATTGTAGTTCAAGCTATGATTTCAAATATCTCCAAGCCTCATAGG TTTGGTGGTTAGATTATGGTCGGTACACCTTATCTTGCAGGGATTCTTTA TGACATAATTGCTTCTTAATTTATTCACAATTGTAGAGTAGCAGGAGCAG ATATAGAGTCTAATCTAACCCCTTGTGGCAGGATTCCTATTTGGTCGTAT GCAAAGCTGATTTTTACCTGCTGGCTGGTCATCCCGCAATTCAGTGGTGC TGCATATGTTTATGAGCATTATTTGAGACCTTTCTTTCTCAACCCTCAGA CTATTAACATCTGGTATGTCCCAAGAAAGAAGGATGTCTTCAGTAGGCCA GATGATATTCTTACTGCTGCAGAGAAATATATGGAAGAGAATGGGACAGATGCTTTTGAGAAGCTCATTCACAGGGTATGCCATCTTTGACAATCATTTT CCACGTACTAGGTCCTAAACTCGTGTATTGATGATAAAATTTATTAAAAG AAAGAGAAAAAAAAGAAGTATCCTCTGGAATTGAGGAAATCATGTTGTCT CTACTTGGCATCAAGCAAATCGGATGGTGTTATATTATAGAACCAATGGT TTTTCTTTGAAGACAATTTTTCCACCACTTGCTTATCATTTTTCTCTTGTTCTTCAGGCTGACAAGTCGAAGAGGAATTACGACCACTCTACTTACGAATATGACAATGTTTATTGAGTTTCATGGCCCGTGTTGAGTTGCGTGTCAGCA GAATGAAAAAGACGTCTTTACTGTTACTATAATGCTTTTTGTTGTGGATACTTTTCCTCTTGTGTTGCAGA
CsHVA22d>orange1.1g032264m scaffold00035: 329293..330823 +TTAGTGTACTTTACTTCTTCTGATCACAATGCTGATCACAATCTGGACGG GGCTAAATCTAGTTGGACACGTTGAAGGCAGAATCCGATACTGTCTCCCA TCCTGCCACGTGTCTTAATCTCTCCAATATAAATAGCTAACCCATATAAC AGGTCCACACAACTTTTGTCTTAATCCTAGAAACCATTTTCTCACTTGGC CATCACAGTCTTCTTCGATTCATCACTTTATTCATCAGTCAGTTTTTCTC AGTGTTTATTTACTACAGTATCCAAAAAAAAGAAAAATAAAAAATGAGTC GTTTCTGGAATTTGATCTATGGTGTTCATTCACTTGCAGGGTATTTTTTT GTTTTTTTTTATATTTTTACTCAAGTAAAAATCTTTTTGATATAATTTCT CTAATATCTGATCATAAAATATGTATGCAGGCCAGTTCTGATGCTGCTGT ATCCCTTGTAAGTGATTGATTAATTTCTTTTCATTTTCTGTATTAATCCT GATTATTAATTAATTAATTAACTAATTAATTGAGTGATCTGATAATAAAA GTGGGGTTCTGATACATATGCCAGATATGCATCAGTTGTGGCAATTGAGA GCCCATCAAAAGTGGATGATGAGCAGTGGCTTGCTTATTGGATTTTGTATTCATTTCTAACTCTTACTGAGATGGTACTCCAACCGGTTTTAGAGTGGTA AGTGAAACTAATAGATCATTTAATTTTTTTTTGGGGATTAATTAGTTTTT ATATGTGACAAGTCATGTTATGAATAATTAAATTTTAGGATACCAATTTG GTACTCGGTGAAGCTAGTACTAGCGGCATGGCTGGTTCTGCCACAGTTCA GAGGTGCGGCTTTTATATATGAAAGGTTTGTCAGACAGCAAATTAGGCAG TACAGAGGAGGTAAAGATCATCATCAGCATCAGCATCGCAAGTCTTCTCC TACTGGCACTGGCAAGGGCAAGAACAAGTTTGTGGACTTTATTATGCCGA AGAAAGTAAGCTAATTAATTGGATTTTTTTTAAAAAAAATCGAATTTAAA ATTAAAATTGGAGTTGTCGTAAAATTTAGACGTCTGAACCTGAGCACGAT TTAACTCTTAATGGATGTTACTGTTCTATATTGAAAGAATGAAGTAAAGT
GTGAGTGAACAGAAGGAACTAAGATTTGTGTTGAATTTTCTAATGAGATG TATTATTCAATTGGTTGTGTGCGGACAGGGGGAGCACGAGGCATACTAACCAACTACAAGAAAAGAAGAGAAGAATCTCCGTTGGCTCGTGTTCGTGTGT CGAGCTTCTGTTGCTTTGTGCTTTGCTTTGCTTTTAGGTTAATCTTCTCT CTTGGTGATTGTTGTATAGATGAAAGCTTTAACTTTTAACCCTGTACAAG TTTACAAGTTTGCGACTTTCAAAGCTTCTGTGACGCTTTAATGAAGAAAT TAGTGATCATTTGAGGCCGCTCACTCTTTTTCGGCTTAGCAGTTTCTCAC ATGTCAGTCGTATAATAATAAATCAATAGCA
CsHVA22d*>orange1.1g033193m scaffold00035: 329293..330823 +TTAGTGTACTTTACTTCTTCTGATCACAATGCTGATCACAATCTGGACGG GGCTAAATCTAGTTGGACACGTTGAAGGCAGAATCCGATACTGTCTCCCA TCCTGCCACGTGTCTTAATCTCTCCAATATAAATAGCTAACCCATATAAC AGGTCCACACAACTTTTGTCTTAATCCTAGAAACCATTTTCTCACTTGGC CATCACAGTCTTCTTCGATTCATCACTTTATTCATCAGTCAGTTTTTCTC AGTGTTTATTTACTACAGTATCCAAAAAAAAGAAAAATAAAAAATGAGTC GTTTCTGGAATTTGATCTATGGTGTTCATTCACTTGCAGGGTATTTTTTT GTTTTTTTTTATATTTTTACTCAAGTAAAAATCTTTTTGATATAATTTCT CTAATATCTGATCATAAAATATGTATGCAGGCCAGTTCTGATGCTGCTGT ATCCCTTGTAAGTGATTGATTAATTTCTTTTCATTTTCTGTATTAATCCT GATTATTAATTAATTAATTAACTAATTAATTGAGTGATCTGATAATAAAA GTGGGGTTCTGATACATATGCCAGATATGCATCAGTTGTGGCAATTGAGA GCCCATCAAAAGTGGATGATGAGCAGTGGCTTGCTTATTGGATTTTGTAT TCATTTCTAACTCTTACTGAGATGGTACTCCAACCGGTTTTAGAGTGGTA AGTGAAACTAATAGATCATTTAATTTTTTTTTGGGGATTAATTAGTTTTT ATATGTGACAAGTCATGTTATGAATAATTAAATTTTAGGATACCAATTTG GTACTCGGTGAAGCTAGTACTAGCGGCATGGCTGGTTCTGCCACAGTTCA GAGGTGCGGCTTTTATATATGAAAGGTTTGTCAGACAGCAAATTAGGCAG TACAGAGGAGGTAAAGATCATCATCAGCATCAGCATCGCAAGTCTTCTCC TACTGGCACTGGCAAGGGCAAGAACAAGTTTGTGGACTTTATTATGCCGA AGAAAGTAAGCTAATTAATTGGATTTTTTTTAAAAAAAATCGAATTTAAA ATTAAAATTGGAGTTGTCGTAAAATTTAGACGTCTGAACCTGAGCACGAT TTAACTCTTAATGGATGTTACTGTTCTATATTGAAAGAATGAAGTAAAGT GTGAGTGAACAGAAGGAACTAAGATTTGTGTTGAATTTTCTAATGAGATG TATTATTCAATTGGTTGTGTGCGGACAGGGGGAGCACGAGGCATACTAACCAACTACAAGAAAAGAAGAGAAGAATCTCCGTTGGCTCGTGTTCGTGTGT CGAGCTTCTGTTGCTTTGTGCTTTGCTTTGCTTTTAGGTTAATCTTCTCT CTTGGTGATTGTTGTATAGATGAAAGCTTTAACTTTTAACCCTGTACAAG TTTACAAGTTTGCGACTTTCAAAGCTTCTGTGACGCTTTAATGAAGAAAT TAGTGATCATTTGAGGCCGCTCACTCTTTTTCGGCTTAGCAGTTTCTCAC ATGTCAGTCGTATAATAATAAATCAATAGCA
CsHVA22e>orange1.1g033043m scaffold00057: 256109..257187-ATGGGTGTTCTTGCAGTAATCGCTAAACGTTTGGATGCGCTGATCGGGTA ATTAATTAATTAATTAATTTAATAATTGCTCTTTTATATATATGTCTCTA AATTTTTTCTCTTTTAAATCCTTGCCGAGAAATTAAATTTGATTTGTGTT TTGAACAGGCCAGGAGTTATGCTTCTTTATCCATTGTAAGTGAAAAGCGT TAAGTAAAAATTATTTTGTATTAAATGTAATAAAATGAACTATATAACAT AATGAACTAGACGTTTAATTATTTGTATGGATATGAATGTACATACAGAT ACGCATCATTGCGAGCAATTGAGTCGCCTTCAACTCTAGATGACCAGCAG TGGCTGACGTACTGGATTATATACTCTTTCATAACCTTATTTGAGCTATC ATGTTACAAAGTCCTCGCTTGGTACATATGCATGCTTCATTCTCATTAAG TGTTTATAGAATTGTATGTAAAATATCTACTAATTAATTAACCATGCATG CATGCAGGCTTCCATTTTGGGCATACATGAAGCTACTATTTTGCATGTGG TTGGTGCTGCCAATGTTCCATGGGGCAGCTTATATATATGAAAAGCATAT AAGGAGATATGTGAAGATTGGTGGGTATGTGAGCCCATCATCAAATTATA CGGCAGATCAGAGGAAGGTTCTTCAGATGATGAGCCTTGATGCTAGAAAA TCAGTGTCTCAATATGTTGAGAAACATGGATGGGAAGCTGTCGAGCGGGC TATCAAAGCGGTAATTAATTACTGAATTAAAAAGTTAAACACATTTATAT GCAGTTGCTCATCATATATATGTTTCGTGTTGTTTTTGCAGGCTGAAAAA GAAACAAAGAAGCGTTGAGGATCTCCAACTACGTCATCAGATCAGCCTCG CATTCTCTTCAATTATAACTCTTATGTAAAATGTAAAGATGGAAAGATGC CACGAGCTAGAGCATATATTCCAATTAATTAATTTGTGTTACCAAAGAGA ATGAGATGAATTTGTTACTGTAAATGTTCTTGACGAATGTATACAAACAC AAACTAGAATTAATTGTTAACCGTTAATT
CsHVA22f>orange1.1g047167m scaffold00374: 83572..84332-TACATATCATTGGAAACACTTGAGCGTCGTTCTGTGCAAGATTATAGACA ATGGATGACTTATTGGATTTTATTATCACTTGTAACAACATTTGAGATGC TTTGTTGGAAAACTCTCGGTTGGTATGTCTAATCTCTACTCATTGTTTTA TTATAAGGGTAAACGGTGGAACTCAATTAAATTGATGTTATCAAAATTTC TGAAATTTATGGAAAGCCTAAATTTTAAATTATTTTTCGTGAATTGACTA TTTTTAAATTTCTTTTTTTTACTTTTGAAAACTTGAAGTTACCTTCATTT TTTGTTTAAAATGAAGGTAAATTGAGATTTTCAAAAGTAAGACATATTAT TTGAAGATAGTCAACTCATGAGGTGAGTAATCCCAAATTTATCCATTCGA AAAATCAGTATAAAACCTCTATTTCATCTCACACCGTTAGCATATTCGAA TAAGTCAATTTAAATGGAGGTTGAACAAACTGTACCCTTATTGCAATTAT AGGTTAAAAAAAAAATGAATAATTACACGCACACATTTTTACAGAGATAA ATTCTCCAAATTTTTTTATATGTTTCTAATTAATTTGATTGTGTGACAGG TTTCCGGTTCCTAATTTTATTTGGGCATACTTGAAGCTCTTGATTTTCAT ATGGCTAGCTCTTCCAATTTTCAATGGGGCTCGTTTTTTCTATGAGAAAT TCATAAGAGTTTACTACAATAATTATGTGCGCAGGCACCTTAATAATATT ATTGGCGTGTAA
Supplementary material 3. Promoter sequence of the Citrus HVA22 genes (1500 bp upstream the initiation codon).
CcHVA22a promoter (1500 bp) CCTGTTTGTGTTCAGGATAATTTTAACTCAAAAGAACTTATCAATAATAATAATAGTAGAATAAAACACAAATTTGCAAGGAGCAACTTTTTTTTTTAATTATTTAATTGGTGTAATTTTTTGTGAAAAATATATTTTGGAGAGTATTTTAAAAATTGTCATTTTAAGAAGGAATTTGGCTTTAAATTTATATTATTAGATTTTTTAATGAAATGAATAAATGAAAATTTAAGTCATCATTTTAAGAAGTAATACACACATACATACATACATACATTGTCTAATAATTTAACATTGTCTAAATCAACCATGAAACATTACATTAATTGATACATCAATGAGTATGACAAAGAAGAAGAACTTCCTTGACTTTCTATTTCATACAAAACAGAGGAAGTTGATTAAATAGAGCCATGGCTGTATATAATCTTGGCATCAAAAGCAAATTCTTCAGTTGGGGAGTTGCAATGCGAAGCCAAGCTCAACAGTAGCAGTAGACATAATCTTGAGTCTTGCTAGGTTGCTAATACCTGTGAATTGTTGTAAAATGTCACCATCCTTTCTCATCAAAACTCAATAAACTCTTACTGCCTTTAACTCTTAGTTTTCATGTTTGGTGATTAACCCTCGCTCTCTGATAGCAGATTCGTTCAAACAGTGAAATTCGTCGGGAGCCACGGTCAATTACGATCCCCCCACTGCCCTGCATACTGATTCTGACCTTTTAGCACCGCAAACCATGCTAGAGCCAACCAAATTATTGAAGCAGGGAGATATACTGCAGCTCGGGGAGGTGTCTTTGTATTATTGAGCTGCATTTCCAGATATATTGTCTTCCCCAAGCTTCCTGATAGAAGATAAACAAAATGATTCTGTAAGGTAATATGTTTGTCTATGCTGAATAGAAGAATAGAGCAGAATTTCTATAAATTGCTCCTCTTTATGTTTCTTCAGTGAAAATATATAAGTGACATGAAAGGATAAAAATATTTCTTCTAAAAAGTTCAGCTTAACAATAATATTGCCTTTGAATATGGTTTATGTATATAAAGAACAGTCCAAAGTCCCTCTCATTCACATACCTGCAGATGCTACAATATCCTTCAACTTTCGAACTTTGATGTATTGCATTTGGCAACATGCAACATGTGGTAACTTCAATACCTTCAGCCATCGAGATAAAACAAACAAACAAATAAATAAAGAAGAAAAAAATAGGGAAAAATATAAACGGCCCATCTTGGGCCTGACTAGAAGGATACATATAGACATATGTTCTGTTTGATAGCGTGAGTATTTCAACATACCTCCACAGTGTTATACTGCTGGCTCCTTCCTCACTGCAGATAATATTTTGCTCGCCCTTGCCAAGCTTCGATTGTATCATTTGTTATGATGTTTAGATCCAGAGCATTTTCTTAATAGAATGCCCCAGCAATTTCATAAAGTTCCCCAGTGAAAATGGCTAACACTGAATATATTGCGTTTGTTTTGGGATGGG
CcHVA22b promoter (1500 bp)ATGTTCGAAGAGCACACAATTTGATAGGAAAAAATAATGTAATTAATTTACAGAAAGCTTGATGCATCTCTCATGCATGAGTTAACTATACATATAATTGATGAGTATAGTTTACTAATATATGTTGTTCTTATTCTCTGACTGAGAGGAAGAAAAAAAAAAGAAAAAGAAAAGATAATGTGCATTTGTCCCTGCGAGTGTGCTTGACCGTTAAACAACGTTGAAGTTTACACAATTTGATAAGAAAAAAAAAATGTCATTAATTTACAGCAAACTTGATTAAAGCATATCTCAGGCATGAGTTAAAAGAATCTACATATACATATAATTATTGATGAGTGCAGTTTACTACTATATATTGTTCTTATATATTCTCTAATTAATTAGAGAATAAGAAAATGATAATGTGCATTTGTCCCTAGGAGCGGTTCGACCCTTACATAACTTAGGCGGTTGTCCAAAGCCCGCTATATATGAAGGTCCCACATTTATATTAAATTATTATTTTGTATAAAAAAATAAATTTGAATTATAAAATAATTATTATTTTTAATTATTTTTTCCTAAATAAATTATAAAATCCCTATAAAGTCTATTTAATGTAATACTTTATAGCCTTAATTTTCTACAAAACCATTAAAATTATTAGTTTCAATCCTACAATATGTCTATTTTATCATTAGAATTAATATTTTATAATTTAAAAATTATATATTCCTTTTAAGCCTCCATAAAAAGTCCCACATTTTGTAACTTATCCATTAAACTTTTTTTCTCCAACAAACCAAGAGACAATATGGTCTTGGTGCCTAAAAAAGAAAAAAACAGTTTCCTCTACTTTCTCCTTGAGAAGAAAAAAAATTCTAAAAGTTTTCTTTAATCTCCATGGTTATCTTTGTTTTCTATAGTTATTGGTCACTGCTCAAATTCCCAAATAAATAAAGATAAAGTTATTTTGTGATTTCATCGAAAGTTTTAAATTTTATCTTTTTATTTTTCTCTTAATTAATTTGTGTTATTTACCTGTTCTTATTTGTTTTTAAATTATTCTTATGTTAATCTACTACTACTACTACTACTACTATTATTATTATTATTATTATTATTTTGTGTGTACTTGCTTTATCTATAGTTTGTGTTATTTACCTGAAGTCTTCTATTCATTTATTCTATTTCCTCAGTCTTCTATTCATTTATAATATTCTATAGCTTGAAGAAGAATCATCAACAGAAACAAAGAAATGAAATGAACTTACCACATAAGGTGGGGTAGCATACAATTGGTCAGATTCAGGATTTGCGTCCATGTCAGTAGCTCATGGAAAAAAACCTTGCAGTTCAAGCTCCGGCTTCATAATTATTATTATAACTTCTTGCAATTCTATGTATGAACCTCATTTAGAACTTACAGTCACCTCATCATTGATGGCCATGCTTGTCTATACAATCAGAAATTAATTGACTCAAATCAAGAAGAGTAATGAGCAATGAATAAGCCTGT
CcHVA22c/CcHVA22c* promoter (1500 bp)TCTCAAATTGAAGTTCTGCAAAGCGAACTACATGCAAGGGTGGTACAATCTAAACCTGACTTGAATATACCTCCTGAATTTCAGCAACCAGAATTGTCTTCACATTTCCCGGGAGATAGCTATGGATTTCCTGCTGCTGTAGAACCAACACTATCTCAAGCGCCTGCTGTCCTTGTCGTCCCCATCCATTCTGACCTTCAAGCTTATTCAGCATCTGATGTTGCTCAACTCACATCTAAACCCGCCTCAAATGTAAGCAAACCGCATGCTAGGTATCCCAACCCTGCAGATTCCTGGCCTTCCCAACTTCTTGGGGAGAACGTTTCTAGTACTAGGGAAAATGCTGATAGAAACAAATAAGCTTAAACCTTGTAGCTCCTTACCTTGTTTTTAGTTAATTGGCGGAGTTTGTATATTTTGATGGATGATGATGGTTGTTATAGTGTTTTTGATGTGCATCGGTTGATTTTGATGCTTGGCGTTTGGTAGATGATGGTTGGTAACCAATATAAACTAACGATTTTGGTACAATATGAAAACTACACATTTTAGGATTGGATACTGAAACAGTTGAAACTTGAAAGATGTAAATAACACAATCGAATTTTCAATTTCCTTTTTTTCTTTTTTAAGTAATAGCGGTTCAAGACTTCAAGTTTTTTAATGAAGCAATACTTACTACTTAGGTTAGGTAGCTGCTTCTGAGGAGTTAATGGTGCATTTATTTTTTGAATTAGGAAATCAGAATGCTAATATTTATTTCATAAAGTAGAGCTGGGAATCGGAATTATAGGGCTCATCTTATTTTGGGATTTGGAATGGGGA
ATACGAGGTTGATTCTAAATTTCAAGAGGGTTAGAAATCCCACTTTCTAGGTCAAATTATTTTACCTCTCAATAAAATAAAAAATGTCTATTTGTCCTCAATTTAGAAAAAAAAAAAAAAACCGAACATGATTGGATTTTTGCGGGATTGATTTGTAGTTGACGAAAAGTAGTAGTCATGACCGTCGCATGCTGGTAGTTGAATGCAGCGTAGTCGATTGTCGAGCATCACCTTCGCACGTGATGTAGATCGCCAGCCTCGCTCCTTGTCGACTAATAATAATAATAATAATTAAGGGTATTTTAATAACTTAAATAATCTATTTTGATTCGAAAATAAAGTAAATGGGTTAACGGCGGTTTAGTTCATTCAGATTCTTATATTTTAAGTAAATAATTTATTTTTATTTTTATTTTTATTTTCATTTCTATCAATTCTGATTCAAAATTAATTTGATTCTTATTTAATAAACATACCATAACATTTTTCAGTCCCCACAAATACAAAATCGGGGGATTAAAGAGTAACTGTTGGTTAAAATATCGGTCTTACAATTTTTTTAAAGTTAGAAACTACTAGAGAAGGATATCACTGAAAGAAAGGGTTAGCTTTTAGAGATTCCCCAAATTATTTGTTGAACCAAACCCAACCCCCACCCCCACCGCTTGGGCGCTCG
CcHVA22d promoter (1500 bp)TCGGTCATCAAAGGTATTTATTCTTATATTTTTTCTGTAACTATATAATTTGTTTTTATTAAAATTTTTTTATATATTCTAATTCTAAAATTATTATGTATTCACTTGAACGTGGTTTTACTTGTATATGATAAAATATTATAGCATTTATGTTCTTTAAGATACACACACGCACATTATTTGACGTTCAAATTTAATAAGGATACAAATGTGAAAGTATATATTTTACATTTGTAAGTTGAAAAAATAAACAACTTAATATTTATTTTTAGAGATAAAAAAATATTATTCAGATTCAAACTTTCATGTTTATTCAGATTTCAGACCAATTTTGACCCATTCAGGTTTCCGATTAAAAAAAAAGGAAATTATCATTTTCCCACCAAAGTTATTTTCACGTATCAAATCAGTACCATAGTTTATTGAAAATGTATTTTACCACCAAATGTTTGCTTTTTTATTGTTTTACCACCATTTCGTTAGACCAGTTAAAAATTTGCTGATGGTTTGCTGATATCATAGGGCCATTTAAGGCATTTTCCTTTGAAGTTAAAACATTGCGTTTGCAATGATAAAATAAATAATAAACAAATTATTAGATAAATAATTTTAAAAAAATAAGAAATTTGCAACCCTAAAAATTTGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCCATCTCCGATCTGTCTCTCTCTCACTCGTTGCTCTATCCACCACAATGTCATCACTGACTCGTTGCCGTCTCCATTGTCATCTGCTCTCTCCACTATGGGCTATTGACTTCTTTTTTTTTTTTTTGGCTTATTGTCCATTACATTTTTTCCTTAATTAAATTATTTTGAGTTGTGATTAATACTTGAATTTAGTATATTATGATTTTATCTCCACGAGCAAAATTGACTTTTAACTCATTTTCAATTAAATATTAACACATTTTTAGCAGAATAGTGGTAAAATAATAAAAAATAAATATTTGATGGTAAAATATAATTTTCAACAAATCATGAACTGACTTGATATGTTAAAATAATTTTGGTGTAAAAACTTTATTTTCCCAGAAAAATACCACCTAAATCACTTTCGAGCTTCTGAAGGCTCCATGTGAATTAGTATTTCAGTCGTAATCATAAAAGTGTGCCGGCTCAATCTAGAGATGGACCAAAAATGCGCAACTGGCCCAACCAGAGAAGCTTTGAATTAAAGTATTCACAATGTCAATTTCTCTTTGATTTATCCATCCCATCACTGTTGCATATTTGGATTGTTTGATTTAATGACAAGTGTCACCGACTTTTATCCTGGAACCACATGAATACGTGGCTTCTGTCGGGGGGAAAGAACAAAAGCCACTAGGTTCTCACCGTCACCGCATTGATTTAAGCAAAGCAAACATCCCAAGATTAAAAAATATGAAGGAAAAAAAAATTTGCAGGACCAGCGTGCTCTTAGTGTACTTTTCTTCTTCTGATCACAATGCTGATCACAATCTGGA
CcHVA22e promoter(1500 bp)TGAAGAAGTGAAAGAGTGAAGAGAGACCTCCTTTGTGATGGAATGGACTTAATCTTTTATAGTAGTGTACCCCTTAGAGTGGTTTTAGTTCTTTTTGACTTGTGGCAATTCATATATGGCTCTTTCCCTCCTTAATAGGGGCAACTGTGTAATCTAATTATTTAATTTCAGTCCTCAAGTCTCTTTAAAGTGGGGTCTCTTTTTTTTTTTTTAATTTTGTTATACAGAGATGGTTACTGATATTAAATCAGACATTACAATTATAATATTTAGATTGTCTCCACTCAATTATTCTTGATGAGAGCAGTTGCCTTACTTATGTCTGGTGTGGTCCGCTCTCTCGATTTTAGTGCCCATAACAATTAGAACGGATTTTGAATGGGTTCCGATGGGTCATCTCATACTAACATGTATTAATTTTAATGGAAACCCTATCAGTGTTATTGTTGTCTCCAAATGATTCTCGGCAATAATTCAGCACTAAGTAGGAGACATCCTCTAATTTTTTTCAGATATTACTTTATTTTTTTTCCATAATGACCCAACCTTTAAACTCTCAATTTAAAGCTTGTCGAGGACTTTTATATTCAAAACACTTTCTTGTATACGCGCCACCCCTTCATTGGCTAGTTAAAATTTTACCACAGCGAGTGTCGATCATTTATAAAGACTTCATAATGACAAATACAAACAGTTTAATTCAAAATGAGAGTTTGGGAATAATTACGGAAGGACATTGCTGTTATTATTGGACCACTCAATTAAATAAAAATTAATTAGTTGGCCAACAGAGACAGGGCGGAATTGACGCAATGATGTAGCAAAGTCATTCTCAAATCCTTTTGCCCTTCGATAACTTCACTTTTAGTGATAGCCTTTTTATCACAATATTCTTTTTGTTTTCTTTGTGTCTTTTGAATTTTGAGCATGATGATTCCACTCCCAAGTAATATTAGTGGCTTTAACAAACAATACACATGCTATGTAATGTATCGGATCATAAACGAACATTTTGGCAAACATAAACTATAGACTTATAGAGGCCATTTTATTAAATTTATTTCATGTATGTGTACTCTAATTGTCATGTGGGCATCAATCTCTAATGACTTTAAGTTTTTTATACATGCATCAATCTGCACTTGGTTTTTATTAGAATATTCTTTATAAATTAGTCATAAAAAGGTTCTTTTTGAGTTTTTTTTTTCCCTTTCTTCTTCTTAAAAAAAATTTGTGAAATCATAAATATTAATTCTAAAAAGACGAAGGAAGGCCACAGAAGAAAGGGAGTTAAGGCATAACGTAGACATTTAAAAGGTGTAAAGAATAAGTAAAACTTTTCGCATAATTAATTTCTCCCATGTTTTCTTCGATGCTTGTCTTGTTGACAAAGGAAAGAGAGATCGTTGCAACAAAAATTCTTTACTTGTTTTCATGATCAAAACACGCCCACTCTTAAAACCTTTTAAATACTTATTTTGCCCTCTTTGCATGCTCTTCA
CcHVA22f promoter (1500 bp)CAAATTTGGTGGCTTAACCACCAAATTTGTTGACCAAATTTGTTGATCAAATTTGATGGATAAGCCACCAATTTTGATCAAGATTGGTGAGCTTGATTTTAGGCAAAATCTTGCCTATAAAAGGAAGCTCTCATTTGAGAGCTTGGCATCCAAAATCCAAGAGAAGCAATCCAATTGAGAGCATTCAATTGGTGAATGCAAGTGAAGCATTGAGAGCTTCCAACA
TGAGAGAGAAATATTCTTAAGCATGTAGTTATATTGAAGGAGCATTTGGCTCCTCAATATGGGTATTACGGATTTGCTTTGTTAAGGGGTATTTCTCAAGATTATGTATTTGGGACTTGGGTGAGAGAAATTTATTTCTGAGAGTGTGGTTGTAATAATTTTCCACATAGTGAATATTTTTCTCTGGTTGTCTCTCGACAACGGCCGTGGTTTTTCTCCGAATTTGGAGTTTTCCACGTAAATCTTGTGTTGTGTGATTGATGTATTCTCCATTTAATTTTTCTGTTAATTTGTTGCTTGATAAATTGCTTAGAGTGATCTTGGGAGGAAGTTCAAATTTCTAACAGTGGTATCAGAGCCATTGATTGAAGTTTTGGTGTCGGGGTACTATTCACGTATACGGTACTGTTCACGTGAAGCAGTGGGAGCCAATCCAAATAATTTGTGGTGAAGAGAATAGGAAGCAAATATGTCAGCAGCTTGTGTTTTTCAAACTTGGTTGAAGTTTGATGTTGTTGAAAAATTAATGGGAGAATGATTTTATTGGCTTGTGGAGAATTCAAGTCAAAGGTGTATCCAATCTGGTATGCACAAAGATTCGAAGGTGTGGACAATTTTGGCACCTCAAGAAAATTGTCAAGAAGGTGGAGTGGGCTCGGCAAATTACTCCAAAATCAGTAAAGGAGACACTGATATTCTCGCAGATGGTGAGTTTCCTTTTGATAGGAGACTGGGTTAGTTCTTTTGGCATGTAGATCTCCAAGTTGCCATGAAAGAGAACATGTTATGATCAGCGGGGTCCACAAGTTTGCACGCGGGCATTGGCTTGGTATAAATGCAAGGTGTGTGGTGGAAAAGTTATGTCGTGGCTGAAGAATTCTTAGGGAAACCAAGCATGAGAATTGCAACATAATTTTCAGCGGATATGTTCGACATGTGCCGGAAAAAAAAATCTTAGAATAGTTTATTCTAAGTGGTATACTCTTTATGGTGGAGTATGATACTTCTCTATGTTGAGAATTATGACTGTTGGTGAAGACGGTGCTTTATATCAATAGTTATGTATTTTTTTTTTAATTAAGGTGGAGATTGTTGAAAATTGATTAAAAAAAAAGAGAAAAAAAGAAAGGTAGCTTCAAATTTGGTGGCTTAACCACCAAATTTGTTGACCAAATTTGTTGATCAAATTTGATGGATAAGCCACCAATTTTGATCAAGATTGGTGAGCTTGATTTTAGGCAAAATCTTGCCTATAAAAGGAAGCTCTCATTTGAGA
CsHVAa/CsHVA22a* promoter (1500 bp)GCTGGTAGGGCCGGATTAAGCGTCCTGTTTGTGTTCAGGATAATTTTAACTCAAAAGAACTTATCAATAATAATAATAGTATAATAAAACACAAATTTGCAAGGAGCAACTTTTTTTTTAATTATTTAATTGGTGTAATTTTTTTTTAAAAATATATTTTGGAGAGTATTTTAAAAATTTTCATTTTAAGAAGGAATTTGGCTTTAAATTTATATTATTAGATTTTTTAATGAAATGAATAAATGAAAATTTAAGTCATCATTTTAAGAAGTAATACACACACACATACATACATACATACATACATTGTCTAATAATTTAACATTGTCTAAATCAACCATGAAACATTACATTAATTGATACATCAATGAGTATGACAAAGAAGAAGAACTTCCTTGACTTTCTATTTCATACAAAACAGAGGAAGTTGATTAAATAGAGCCATGGCTGTATATAATCTTGGCATCAAAAGCAAATTCTTCAGTTCGGGAGTTGCAATGCGAAGCCAAGCTCAACAGTACCAGTAGACATAATCTTGAGTCTTGCTAGGTTGCTAATACCTGTGAATTGTTGTAAAATGTCACCATCCTTTCTCATCAAAACTCAATAAACTCTTACTGCCTTTAACTCTTAGTTTTCATGTTTGGTGATTAACCCTCGCTCTCTGATAGCAGATTCGTTCAAACAGTGAAATTCGTCGGGAGCCACGGTCAATTACGATCCCCCCACTGCCCTGCATACTGATTCTGACCTTTTAGCACCGCAAACCATGCTAGAGCCAACCAAATTATTGAAGCAGGGAGATATACTGCAGCTCGGGGAGGTGTCTTTGTATTATTGAGCTGCATTTCCAGATATATTGTCTTCCCCAAGCTTCCTGATAGAAGATAAACAAAATGATTCTGTAAGGTAATATGTTTGTCTATGCTGAATAGAAGAATAGAGCAGAATTTCTATAAATTGCTCCTCTTTATGTTTCTTCAGTGAAAATATATAAGTGACATGAAAGGATAAAAATATTTCTTCTAAAAAGTTCAGCTTAACAATAATATTGCCTTTGAATATGGTTTATGTATATAAAGAACAGTCCAAAGTCCCTCTCATTCACATACCTGCAGATGCTACAATATCCTTCAACTTTCGAACTTTGATGTATTGCATTTGGCAACATGCAACATGTGGTAACTTCAATACCTTCAGCCATCGAGATAAAACAAACAAACAAATAAATAAAGAAGAAAAAAATAGGGAAAAATATAAACGGCCCATCTTGGGCCTGACTAGAAGGATACATATAGACATATGTTCTGTTTGATAGCGTGAGTATTTCAACATACCTCCACAGTGTTATACTGCTGGCTCCTTCCTCACTGCAGATAATATTTTGCTCGCCCTTGCCAAGCTTCGATTGTATCATTTGTTATGATGTTTAGATCCAGAGCATTTTCTTAATAGAATGCCCCAGCAATTTCATAAAGTTCCCCAGTGAAAATGGCTAACA
CsHVAb/CsHVA22b* promoter (1500 bp)ACAATTTAAAGTGCGAAAGGTGGGAACTTAAAAGCAGAGAAGGAAGGCAGAAAGCAGAATAGGAAAAGTAGATAAAGCGTTTTCTATATAACACTAATTGGAAACACAATTTGCGGAGAATCTAATGTTACGTTGCACAAGGACAGAGGCACCGAATTTTTTAATTTTATCTCGTACGCAGCTACCACGAGAGCTTCCACTCAAATGCATCAATCATTGCTTGCCACGTCAGGAATAGCACATACGATGGCGCTTGTGTTTGATGTGGCAAATAAATATATGTTAACCTTCTGAGTATTAGGTGCGATGGAGTTTACAGGACCAAGAGCCTCGAAGTGATTTTTCCTGGCAAGTTTGACGAAATTGAACAAGGGGACCCTGAGGCTCGATCCCCAAAAATCTGATTTCAGCCCAACTTTTTTCTTTGGCCCTGCGGATATGACATATGAGCCACTGTTCTCACCTCTTTTTGAGTTGTTTGTCGCTGTTATGATGATGCAGATGACACGGATTTAAAGCTACTACTGTTTGTGAAATTATTAAGAATTATTGCTTGTGGGTGGTGTCGAATGCTAATTCCTACTTTTTGGTTTATGTAACTAGCCAAAAAATCACAGCCTCCATCTATATATCTTGAATTGTTTATGTATGTATCAAACAAAACAAAACCAAACAAAGAGTCACACAGAATTCACTAATGTTCTGTTTTGACTAACGAAGGCCAGCCATACTAAGGTCCGCGCAATGCTACCACATACTTGCATTCGTTTCCGAGCCCTTAATATATGGATTCAGTGCAAGTAGTAACCAATGCAGCAATGTAGCACATGCAAAATTCTGCATGTTCGAAGAGCACACAATTTGATAGGAAAAAATAATGTAATTAATTTACAGAAAGCTTGATGCATCTCTCATGCATGAGTTAACTATACATATAATTGATGAGTATAGTTTACTAATATATGTTGTTCTTATTCTCTGACTGAGAGGAAGAAAAAAAAAAGAAAAAGAAAAGATAATGTGCATTTGTCCCTGCGAGTGTGCTTGACCGTTAAACAACGTTGAAGTTTACACAATTTGATAAGAAAAAAAAATGTCATTAATTTACAGCAAACTTGATTAAAGCATATCTCAGGCATGAGTTAAAAGAATCTACATATACATATAATTATTGATGAGTGCAGTTTACTACTATATATTGTTCTTATATATTCTCTAATTAATTAGAGAATAAGAAAATGATAATGTGCATTTGTCCCTAGGAGCGGTTCGACCCTTACATAACTTAGGCGGTTGTCCCAAAGCCCGCTATATATGAAGGTCCCACATTTATATTAAATTATTATTTTG
TATAAAAAAAATTTGAATTATAAAATGATTATTATTTTTAATTATTTTTTCCTAAATAAATTATAAAATCCCTATAAAGTCTATTTAATGTAATACTTTATAGCCTTAATTTTCTACAAAACCATTAAAATTATTAGTTTCAATCCTACAA
CsHVA22c promoter (1500 bp)CAACTGAGTTCCTGATGCAGCAAGTATTTCCACCGTGCGCCCAAGCGGTGGGGGTTGGGTTTGGTTCAACAATTAATTTGGGGAATCTCTAAAAGCTAACCCTTTCTTTCAGTGATATAATGGAGGTATCCTTATCTAGTAGTTTCTATTCAAACTTTAAAAAAATTGTAAGAGCGATATTTTAACCAACAGTTACTCTTTAATCCCTCGATTTTGTATTCGTGGAGACTGAAAAAATGTTTTGATGTGTTTATTAAATAATAATCGAATTGATTTTGAATCAGAATTGATAGAAATGAAAATGAAAAATAAAAATAAAAATAAATTATTTACTTAAAATATAAGAATCAAAATGAACTAAACCGTCATTAAAATGTTTATTTTATTTTCAAATCAAAATAAATTATTTTGAGTTATTAAAATATCCTTAATTAATTGTTATTATTATTATTATTAGTCGACAAGGAGCAAGGCTGGCGATCTACATCACGTGCGATGGTGATGCTCGACAATCGACTATGCTGCATTCAACTACCAGCATGCGACGGTCATGACTACTACTTTTCGTCAACTACAAATCAATCCCGCAAAAATCCAATCATGTTCGGTTTTTTTTTTTTCCTAAATTGAGGACAAATAGACATTTTTTATTTTATTGAGAGGTAAAATAATTTGACCTAGAAAGTGGGATTTCTAACCCTCTTGAAATTTAGAATCAACCTCGTATTCCCCATTCCAAATCCCAAAATAAGATGAGCCCTATAATTCCGATTCCCAGCTCTACTTTATGAAATAAATATTAGCATTCTGATTTCCTAATTCAAAAAATAAATGCACCATTAACTCCTCAGAAGCAGCTACCTAACCTAAGTATTGCTTCATTAAAAAACTTGAAGTCTTGAACCGCTATTACTTAAAAAAGAAAAAAAGGAAATTGAAAATTCGATTGTGTTATTTACATCTTTCAAGTTTCAACTGTTTCAGTATCCAATCCTAAAATGTGTAGTTTTCATATTGTACCAAAATCGTTAGTTTATTTTGGTTACCAACCATCATCTACCAAAGGCCAAGCATCAAAATCAACCGATGCACATCAAAAACACTATAACAACCATCATCATCCATCAAAATATACAAACTCCGCCAATTAACTAAAAACAAGGTAAGGAGCTACAAGGTTTAAGCTTATTTGTTTCTATCAGCATTTTCCCTAGTACTAGAAATATTCTCGCCAAGAAGTTGGGAAGGCCAGGAATCTGCAGGGTTGGGATACCTAGCATGCGGTTTGCTTACATTTGAGGCGGGTTTAGATGTGAGTTGAGCAACATCAGATGCTGAATAAGCTTGAAGGTCAGAATGGATGGGGACAACAAGGACAGCAGGCGCTTGAGATAGTGTTGGCTCTACAGCAGCAGGAAATCCATAGCTATCTCCCGGGAAATGTGAAGACAATTCTGGTTGCTGAAATTCAGGAGGTATATTCAAGTCAGGTTTAGATTGT
CsHVA22d/CsHVA22d* promoter (bp 1500)CATCTTTTTTTCAACAGTCATGGAATCCCTTCTCACTTTACTTCTCTCATCAAGCTCTTGAATCTCCCATTATCGGTCATCAAAGGTATTTATTCTTATATTTTTTATGTAACTATATAATTTGTTTTTATTAAAATTTTTTATATATATTCTAATTCTAAAATTATTATGTATTCACTTGAACGTGGTTTTACTTGTATATGATAAAATATTATAGCATTTATGTTCTTTAAGATACACACACGCACATTATTTGACGTTCAAATTTAATAAGGATACAAATGTGAAAGTATATATTTTACATTTTAAAGTTAAAAAAATAAACAACTTAATATTTATTTTTAGAGATAAAAAAATATTATTCAGATTCAAACTTTCATGTTTATTCAGATTTCAGATTAAAAAAAAAAGGAAATTATCATTTTCTCACCAAAGTTATTCTCACGTATCAAATCAGTACCATAGTTTATTGAAAATGTATTTTACCACCAAATGTTTGCTTTTTTATTGTTTTACCACCATTTCGTTAGACCAGTTAAAAATTTGCTGATGGTTTGCTGATATCATAGGGCCATTTAAGGCATTTTCCTTTGAAGTTAAAACATTGCGTTTGCAATGATAAAATAAATAATAAACAAATTATTAGATAAATAATTTTAAAAAAATAAGAAATTTGCAACCCTAAAAATTTGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCCATCTCCGATCTGTCTCTCTCTCACTCGTTGCTCTATCCACCACAATGTCATCACTGACTCGTTGCCGTCTCCATTGTCATCTGCTCTCTCCACTATGGGCTATTGACTTCTTTTTTTTTTTTTGGCTTATTGTCCATTACATTTTTTCCTTAATTAAATTATTTTGAGTTGTGATTAATACTTGAATTTAGTATATTATGATTTTATCTCCACGAGCAAAATTGACTTTTAACTCATTTTCAATTAAATATTAACACATTTTTAGCAGAATAGTGGTAAAATAATAAAAAATAAATATTTGATGGTAAAATATAATTTTCAACAAATCATGAACTGACTTGATATGTTAAAATAATTTTGGTGTAAAAACTTTATTTTCCCAGAAAAATACCACCTAAATCACTTTCGAGCTTCTGAAGGCTCCATGTGAATTAGTATTTCAGTCGTAATCATAAAAGTGTGCCGGCTCAATCTAGAGATGGACCAAAAATGCGCAACTGGCCCAACCAGAGAAGCTTTGAATTAAAGTATTCACAATGTCAATTTCTCTTTGATTTATCCATCCCATCACTGTTGCATATTTGGATTGTTTGATTTAATGACAAGTGTCACCGACTTTTATCCTGGAACCACATGAATACGTGGCTTCTGTCGGGGGGAAAGAACAAAAGCCACTAGGTTCTCACCGTCACCGCATTGATTTAAGCAAAGCAAACATCCCAAGATTAAAAAATATGAAGGAAAAAAAAATTTGCAGGACCAGCGTGCTCT
CsHVA22e promoter (bp 1500)TATTGCAGTGTTATGTTCTTTTGATTAATTTTCCCAATTGATCGAAATGATAATGCTAAAATGATTTGATTTGCTGTGAAGAGCATGCAAAGAGGGCAAAATAAGTATTTAAAAGGTTTTAAGAGTGGGCGTGTTTTGATCATGAAAACAAGTAAAGAATTTTTGTTGCAACGATCTCTCTTTCCTTTGTCAACAAGACAAGCATCGAAGAAAACATGGGAGAAATTAATCATGCGAAAAGTTTTACTTATTCTTTACACCTTTTAAATGTCTACGTTATGCCTTAACTCCCTTCCTTCTGTGGCCTTCCTTCGTCTTTTTAGAATTAATATTTATTATTTCACAAAAAAATTTTAAGAAGAAGAAAGGGAAAAAAAAACTCAAAAAGAACCTTTTTATGACTAATTTATAAAGAATATTCTAATAAAAACCAAGTACAGATTGATGCATGTATAAAAAAAATTAAAGTCATTAGAGATTGATGCCCACATGACAATTAGAGTACACATACATAAAATAAATTTAATAAAATGGCCTCTATAAGTCTATAGTTTATGTTTGCCAAAATGTTTGATTTATGATCCGATACATTACATAGCATGTGTATTGTTTGTTAAAGCCACTAATATTACTTGGGAGTGGAATCATCATGCTCAAAATTCAAAAGACACAAAGAAAACAAAAAGAATATTGTGATAAAAAGGCTATCACTAAAAGTGAATTTATCGAAGGGCAAAAGGATTTGAGAAT
GACTTTGCTACATCATTGCGTCAATTCCGCCCTGTCTCTGTTGGCCAACTAATTAATTTTTATTTAATTGAGTGGTCCAATAATAACAGCAATGTCCTTCCGTAATTATTCCCAAACTCTCATTTTGAATTACACTGTTTTTGTTTGTCATTATGCAGTCTTTATAAATGATCGACACTCGCCGGTGGTAAAATTTTAACTAGCCAATGAAGGGGTGGCGCGTATACAAGAAAGTGTTTTGAATATAAAAGTCCTCGACAAGCTTTAAATTGAGAGTTTAAAGGTTGGGTCATTATGGAAAAAAAATAAAGTAATATCTGAAAAAAATTAGAGGTTGTCTCCTACTTAGTGCTGAATTATTGCCGAGAATCATTTGGAGACAACAATAACACTGATAGGGTTTCCATTAAAATTAATACATGTTAGTATGAGATGACCCATCGGAACCCTTTCAAAATCCTTTCTAATTGTTATGGGCACTAAAATCGAGAGAGCGGACCACACCAGACATAAGCAAGGCAGCTGCTCTCATCAAGGATAATCTCCTTAACCAAGAAGGGGAGACCCCACTAATGGACTTTTGGTTCAATGAAAAAAGTCTTGAACTTACAATGTTGAGTGTAAGAGTTCGAACCTCCGTAAGAGTATTATAAATCTTAGTTTCAGTATTCTCTCAATTATCAACTAATTGAGTAGAGACAGTATCTCCCTTACGAAATGTGAGTGGAATAGGTATCCCTCGAATATTAGA
CsHVA22f promoter (bp 1500)ATCTGTTCAAATATATTAGTTCACACCAAAATAATACTCATTTAAATTTACGAAAATAAATATAAAGTGCATTTATGAAATTTCAAAATTGAAAGCATAGTTTAATTCGTAATTAATCCTGTTGTCTAATATCCAATCAATTCAAAAAAATTCAATCACAATGAGATGCAATTAAATTACTACTTACAATGGATAAAAGAATGTTACCAAAGGCCTGTTCAACATAAAGTAAAAGAAGTAAATAAATATTGTCAATAACACTTGAGTATAACGAAAATTAAAATTAAGAGATATTTAATTGAGTTAAATTTTCGTATGGAAAAAAATATGCTTCAAATTGTTCTCTATTACTTAAGAGAGTTCTACTTGTATATTGGATTTTCCCTAACTTCTTAATATTTTCAGATTATTATGTTCCATCTAATTGATGAAATGTTGGCAATTAAGAAACGAATTCACTAGAAATTTTTCCTATTTTAAAACCATTTTTTTTGTGATATGAACTAATTATAAATATAACACTTAACAAACTTGAGAATCATGATCACAAATCTATAATTTGTATGCCATTTACAACTCTAATGAACAAATTTTTTTAAAATTAAAAAAAAATATTCTAATGAATATCACTAACCTAATGATCCATGCCGGAGTGATCACTTAAAAATCAATCACAAACACAAACATAAATACAGAATGACTTTAAAACTGCATACATGATATTTCTGCACCTTTTTAAATCCATGAAAATATGTATGCTAATGCACCAAAATGCCTTGGACGAATGAACAAGGCTGCTTCAATACTTGCATGATATATGAAATAGAAAACTTGGACGTTTCTAACTTTGTGAAAAGATAAAAATAATAATAATTGCTTGCCCAAATTTTATAAATATCTTGCCATGAACGAAATGAATAATTTCTTCTTCTTTTAAGAACACAAATTTTTTGACAATGTCTCCGAAAAATAAATACCCAATAAGTTCGTCCACAAGTGAAAAGAATATTCCAATGATACGACTCATCTTGAAATCTGCTCTCTTCTCTCCCTCTATCGGCCTCAATTTTTGTTTGAAAGAGGAAAAATTATGTGGAAAATGAGTGAAGGAAAATTAAAATCTTGGGGTGTTGGAGGAAACTAAATCAAAATGCACAAACTAGATATATGGCTTAGCTTCATGAATTTATATGATAACATAACCAAAGTGTATTTAATGCGGCAGAATTTAAAGATTCAAGAGACAATTAGATATATGATGATATTAATCATATGTGTTATGTTGTTTGGTTAGAACAAAAATACACCAACCTTTGAATTGTACATGTATAAGACAAAAGGATATATAATTGGAACTTAGATGGTAGAGTTTCATTGTGATGCATGTTTAAGTTATCAAAGATGTAGTAATATTGTGTCCCATGCTCCTTATCAAAATTTTGGTTCATCCATCAAAACCCCAATGAATGTATATATTTGACGTGACTAGAATTCAATTTTC
Supplementary material 4. List of the cis-elements found in the promoter regions of the citrus HVA22 genes.
List of the cis -elements found in the promotor regions of the C. clementina HVA genes.
GENE NAME FUNCTION POSITION
NUMBEROF
ELEMENTS
SEQUENCE
>Ciclev10029342m(CcHVA22a)
AREcis-acting regulatory element essential for
the anaerobic induction734+, 1034- 2 AAACCA
AT-rich sequenceelement for maximal
elicitor-mediated activation (2copies)
142- 1 TAAAATACT
Box 4part of a conserved
DNA module involved in light responsiveness
321+ 1 ATTAAT
CARE Not mentioned 457- 1 CAACTCCC
ERE Not mentioned 145+, 1437+, 375+ 3 ATTTTAAA
ATTTCATA
GT1-motif light responsive element 619-, 620- 2 GGTTAAT,
GGTTAA
MBSMYB binding site
involved in drought-inducibility
451- 1 CAACTG
MYB involved in drought-inducibility
304+, 749+, 451-, 482+ 3 CAACCA
CAACAG
MYC Not mentioned1128+, 1384+, 1145+
4CATTTGCATGTGCAACTG
TCCC-motif part of a light responsive element 767- 1 TCTCCCT
TCT-motif part of a light responsive element 582+ 1 TCTTAC
Unnamed__1 Not mentioned 674- 1 CGTGG
Unnamed__4 Not mentioned
79-, 933+, 769-, 1329+, 458-, 1307+, 789-, 138-,
670-
9 CTCC
W box Not mentioned 678- 1 TTGACC
>Ciclev10033698m(CcHVA22b)
AE-box part of a module for light response 1229+ 1 AGAAACAA
AREcis-acting regulatory element essential for
the anaerobic induction630-, 781- 2 AAACCA
AT-rich elementbinding site of AT-rich DNA binding protein
(ATBP-1)895- 1 TAAAATACT
Box 4part of a conserved
DNA module involved in light responsiveness
41+, 1004-, 378+,1453+,
258+, 6846 ATTAAT
GA-motif part of a light responsive element 1122- 1 ATAGATAA
GARE-motif gibberellin-responsive element 1225- 1 TCTGTTG
GATA-motif part of a light responsive element 22+, 978- 2 GATAGGA
AAGATAAGATT
GCN4_motifcis-regulatory element involved in endosperm
expression1459- 1 TGAGTCA
I-box part of a light responsive element 399+ 1 TGATAATGT
MYB involved in drought-inducibility 1225+, 886- 2 CAACAG
TAACCA
MYC Not mentioned 409+, 182+, 1277-, 997+ 4
CATTTGCAATTGTCTCTTA
MYB-binding site Not mentioned 1225+ 1 CAACAGO2-site cis-acting regulatory 1411- 1 GATGA(C/T)(A/G)TG(A/
element involved in zein metabolism
regulationG)
RY-element
cis-acting regulatory element involved in
seed-specific regulation
71+ 1 CATGCATG
TC-rich repeats
cis-acting element involved in defense
and stress responsiveness
132+, 382-, 370+ 3 ATTCTCTAAC
Unnamed__4 Not mentioned
421-, 881+, 774+, 1343+,
726+, 841+
6 CTCC
W box Not mentioned 203+ 1 TTGACCWRE 3 Not mentioned 1262- 1 CCACCT
Circadiancis-acting regulatory element involved in
circadian control888- 1 CAAAGATATC
>Ciclev10022553m(CcHVA22c/CcHVA22c*)
AAAC-motif light responsive element 45+ 1 CAATCAAAACCT
AAGAA-motif Not mentioned 1418+ 1 GAAAGAA
ABREcis-acting element
involved in the abscisic acid responsiveness
1061-, 1062+ 2 CACGTG
ACGTG
AE-box part of a module for light response 348+ 1 AGAAACAA
AT-rich elementbinding site of AT-rich DNA binding protein
(ATBP-1)1245- 1 ATAGAAATCAA
ATCT- motifpart of a conserved
DNA module involved in light responsiveness
46+ 1 AATCTAATCC
Box 4Part of a conserved
DNA module involved in light responsiveness
1271- 1 ATTAAT
CARE Not mentioned 225+ 1 CAACTCAC
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
984- 1 CGTCA
ERE Not mentioned 758+ 1 ATTTCATA
G-Boxcis-acting regulatory element involved in light responsiveness
1061- 1 CACGTG
GC-motifenhancer-like element
involved in anoxic specific inducibility
1334- 1 CCCCCG
GT1-motif light responsive elemento
1172+,1357+ 2 GGTTAA
MBSMYB binding site
involved in drought-inducibility
567- 1 CAACTG
MREMYB binding site involved in light responsiveness
682- 1 AACCTAA
MYB involved in drought-inducibility
84+, 493-, 1352-, 431-, 1356-, 500+, 567-, 1349+
8
CAACCACAACAGTAACCACAACTGTAACTG
MYB-like sequence Not mentioned 500+, 1356- 2 TAACCAMYC Not mentioned 247- 1 CATTTG
TATC-box
cis-acting element involved in gibberellin-
responsiveness
273+ 1 TATCCCA
TC-rich repeats
cis-acting element involved in defense
and stress responsiveness
252- 1 GTTTTCTTAC
TCT-motif part of a light 1371+ 1 TCTTAC
responsive element
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
984+ 1 TGACG
chs-CMA1a part of a light responsive element 628-,1209- 2 TTACTTAA
W box Not mentioned 874- 1 TTGACC
Unnamed__4 Not mentioned
70+, 403-, 314-, 1086+, 111-, 705-,
375+
7 CTCC
Unnamed__2 Not mentioned 684- 1 AACCTAACCT
As-1 Not mentioned 984+ 1 TGACG>Ciclev10033011m
(CcHVA22d)AAGAA-motif Not mentioned 1342+ 1 GAAAGAA
ABREcis-acting element
involved in the abscisic acid responsiveness
395-, 738-, 109+, 1321+, 1323+, 1322-
6
ACGTGGCAACGTGTC
TACGTGCACGTA
AREcis-acting regulatory element essential for
the anaerobic induction112-, 503- 2 AAACCA
AT1-motif part of a light responsive module 966- 1 AATTATTTTTTATT
AuxRR-corecis-acting regulatory element involved in
auxin responsiveness1162- 1 GGTCCAT
Box 4part of a conserved
DNA module involved in light responsiveness
857- 1 ATTAAT
CAT-boxcis-acting regulatory
element related to meristem expression
1354+ 1 GCCACT
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
181-, 1370+ 2 CGTCA
ERE Not mentioned 606+ 1 ATTTTAAA
G-Boxcis-acting regulatory element involved in light responsiveness
108-, 1322+, 395+, 1285+ 4
CACGTTTACGTG
ACACGTG(G/t)CACC
GC-motifenhancer-like element
involved in anoxic specific inducibility
1336- 1 CCCCCG
MBSMYB binding site
involved in drought-inducibility
1178+ 1 CAACTG
MYB involved in drought-inducibility
1187+, 1254-, 485-,
1178+4
CAACCACAACAGTAACTGCAACTG
MYC Not mentioned205-, 1314-, 442-, 228+,
1107+5 CATTTG
CATGTG
O2-site
cis-acting regulatory element involved in
zein metabolism regulation
725- 1 GATGACATGG
TCA-elementcis-acting element
involved in salicylic acid responsiveness
725- 1 TCAGAAGAGG
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
181+, 1370- 2 TGACG
chs-CMA2a part of a light responsive element 101+ 1 TCACTTGA
Unnamed__1 Not mentioned 110+, 893-, 833-, 1324+ 4 CGTGG
GAATTTAATTAAUnnamed__4 Not mentioned 680+, 891+,
751+, 1104+,
695+, 770+
6 CTCC
W box Not mentioned 331+ 1 TTGACCWRE3 Not mentioned 1074+ 1 CCACCT
WUN-motif Not mentioned 619- 1 AAATTTCTTAs-1 Not mentioned 181+, 1370- 2 TGACG
>Ciclev10032960m(CcHVA22e)
AREcis-acting regulatory element essential for
the anaerobic induction79-, 1143- 2 AAACCA
AT1-motif part of a light responsive module 764- 1 AATTATTTTTTATT
Box 4part of a conserved
DNA module involved in light responsiveness
771-, 1247-, 412+, 1347- 4 ATTAAT
CAT-boxcis-acting regulatory
element related to meristem expression
954- 1 GCCACT
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
805- 1 CGTCA
GARE-motif gibberellin-responsive element 785- 1 TCTGTTG
GATA-motif part of a light responsive element 429- 1 GATAGGG
MBSMYB binding site
involved in drought-inducibility
304-, 142+ 2 CAACTG
MYB involved in drought-inducibility
230-, 785+, 304-, 141+ 4
TAACCACAACAG
MYC Not mentioned 974-, 1085+, 453- 3 CATGTG
CATTTG
STRE Not mentioned 69-, 614-, 136+ 3 AGGGG
p-box gibberellin-responsive element 838+ 1 CCTTTTG
Sp1 light responsive element 796+ 1 GGGCGG
TGACG-motif
cis-acting regulatory element involved in the MeJA-responsiveness 805+ 1 TGACG
Unnamed__4 Not mentioned
27+, 487-, 278+, 1286-, 127+, 939+, 450+, 1355+
8 CTCC
As-1 Not mentioned 805+ 1 TGACG
>Ciclev10006951m(CcHVA22f)
ABREcis-acting element
involved in the abscisic acid responsiveness
459-, 635+, 617-, 636+, 459+, 617+
6
ACGTGCACGTGTACGTGCACGTA
AREcis-acting regulatory element essential for
the anaerobic induction432-, 1111+ 2 AAACCA
Box 4part of a conserved
DNA module involved in light responsiveness
747+ 1 ATTAAT
CCAAT-box MYBHv1 binding site 423+ 1 CAACGG
G-Boxcis-acting regulatory element involved in light responsiveness
635+, 458+, 1087-, 617-, 459-, 635+,
6CACGTG CCACGTAA
CACGACTACGTG
GATA-motif part of a light responsive element 946+ 1 GATAGGA
GT1-motif light responsive element 13-, 1374- 2 GGTTAA
MYB involved in drought-inducibility
14+, 1251-, 409-, 1375+, 371-, 721-
6TAACCACAACAGCAACCA
MYB recognition site Not mentioned 423- 1 CCGTTG
MYC Not mentioned 131+, 1158+, 185+, 1492+,
171+, 267+
6 CATTTGCATGTGCAATTG
O2-site
cis-acting regulatory element involved in
zein metabolism regulation
632+ 1 GTTGACGTGA
P-box gibberellin-responsive element 940+ 1 CCTTTTG
STRE Not mentioned 309+ 1 AGGGG
Unnamed__1 Not mentioned 430+, 1089+, 458- 3 CGTGG
Unnamed__10 Not mentioned 457+ 1 TCCACGTAGAUnnamed__11 Not mentioned 525+ 1 TCCACATAGAUnnamed__12 Not mentioned 457+ 1 TCCACGTAGAUnnamed__14 Not mentioned 457+ 1 TCCACGTAGA
Unnamed__4 Not mentioned
263-, 777-, 492+, 950-, 440+, 891+, 649-, 1217-, 274+, 871-, 548-, 992+, 450-, 907-, 754-, 1309-
16 CTCC
Unnamed__8 Not mentioned 457+ 1 TCCACGTAGAW box Not mentioned 29+, 1390+ 2 TTGACCWRE3 Not mentioned 867-, 1305- 2 CCACCT
WUN-motif Not mentioned 885+ 1 AAATTACT
box S Not mentioned 7-, 1368-, 62+, 1423+ 4 AGCCACC
List of the cis -elements found in the promotor regions of the C. sinensis HVA genes.
GENE NAME FUNCTION POSITION
NUMBER OF
ELEMENTS
SEQUENCE
>orange1.1g029734m(CsHVA22a/CsHVA22a*)
AREcis-acting regulatory
element essential for the anaerobic induction
764+, 1064- 2 AAACCA
AT-rich sequence
element for maximal elicitor-mediated
activation (2copies)164- 1 TAAAATACT
Box 4part of a conserved DNA module involved in light
responsiveness351+ 1 ATTAAT
CARE Not mentioned 487- 1 CAACTCCC
ERE Not mentioned 167+, 1467+, 405+ 3 ATTTTAAA
ATTTCATA
GT1-motif light responsive element 649-, 660- 2 GGTTAATGGTTAA
MYB involved in drought-inducibility
334+, 779+, 512+ 3 CAACCA
CAACAG
MYC Not mentioned1158+, 1414+, 1175+
3 CATTTGCATGTG
TCCC-motif part of a light responsive element 797- 1 TCTCCCT
TCT-motif part of a light responsive element 612+ 1 TCTTAC
Unnamed__1 Not mentioned 704- 1 CGTGG
Unnamed__4 Not mentioned
102-, 963+, 799-, 1359+, 488-, 1337+, 819-, 160-,
700-
9 CTCC
W box Not mentioned 708- 1 TTGACC
>orange1_1g030361m (CsHVA22b/CsHVA22b*)
ABREcis-acting element
involved in the abscisic acid responsiveness
224- 1 ACGTG
ARE cis-acting regulatory 587-, 1468+, 3 AAACCA
element essential for the anaerobic induction 665+
Box 4part of a conserved DNA module involved in light
responsiveness
882-, 1218-, 1098- 3 ATTAAT
CAT-boxcis-acting regulatory
element related to meristem expression
449+ 1 GCCACT
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
226+, 355- 2 CGTCA
G-boxcis-acting regulatory
element involved in light responsiveness
221-, 224+ 2 CAGACGTGGCACACGTC
GATA-motif part of a light responsive element 863+ 1 GATAGGA
GT1-motif light responsive element 282- 1 GGTTAA
HD-Zip 1element involved in differentiation of the
palisade mesophyll cells210+ 1 CAAT(A/T)ATTG
I-box part of a light responsive element 1239+ 1 TGATAATGT
MYB involved in drought-inducibility 804+ 1 TAACCA
MYC Not menntioned201-,
1023+824-, 1249+
4 CATTTGCATGTG
O2-sitecis-acting regulatory
element involved in zein metabolism regulation
500+ 1 GATGACATGG
RY-elementcis-acting regulatory
element involved in seed-specific regulation
912- 1 CATGCATG
STRE Not menntioned 370+ 1 AGGGG
TATA Not menntioned 1368+, 1411- 2 TATAAAATTATAAAAT
TC-rich repeatscis-acting element
involved in defense and stress responsiveness
973+, 1222-, 1210+ 3 ATTCTCTAAC
TCA Not menntioned 495- 1 TCATCTTCAT
TCA-elementcis-acting element
involved in salicylic acid responsiveness
411+ 1 CCATCTTTTT
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
226-, 355+ 2 TGACG
Unnamed__1 Not mentioned 184-, 223- 2 CGTGG
Unnamed__4 Not mentioned 114-, 618+, 308-, 1261- 4 CTCC
W box Not mentioned 1044+ 1 TTGACCWRE3 Not mentioned 17- 1 CCACCT
as-1 Not mentioned 226-, 355+ 2 TGACG
>orange1.1g030780m(CsHVA22c)
AAAC-motif light responsive element 1488- 1 CAATCAAAACCTAAGAA-motif Not mentioned 103- 1 GAAAGAA
ABREcis-acting element
involved in the abscisic acid responsiveness
487+, 488+ 2 CACGTGACGTG
AE-box part of a module for light response 1189- 1 AGAAACAA
AT-rich elementbinding site of AT-rich DNA binding protein
(ATBP-1)289+ 1 ATAGAAATCAA
ATCT-motifpart of a conserved DNA module involved in light
responsiveness1489- 1 AATCTAATCC
Box 4part of a conserved DNA module involved in light
responsiveness71+, 430+ 2 ATTAAT
CARE Not mentioned 1312- 1 CAACTCACCGTCA-motif cis-acting regulatory 363+, 565+ 2 CGTCA
element involved in the MeJA-responsiveness
ERE Not mentioned 786- 1 ATTTCATA
G-Boxcis-acting regulatory
element involved in light responsiveness
487+ 1 CACGTG
GT1-motif light responsive element 181- 1 GGTTAA
I-box part of a light responsive element 129- 1 AGATAAGG
MBSMYB binding site
involved in drought-inducibility
972+ 1 CAACTG
MREMYB binding site involved in light responsiveness
863+ 1 AACCTAA
MYB involved in drought-inducibility
182+, 1108+, 1039-, 1455-, 186+, 1046+, 189-, 972+
8
TAACCACAACCACAACAGTAACTGCAACTG
MYC Not mentioned 1292+ 1 CATTTG
TATC-boxcis-acting element
involved in gibberellin-responsiveness
1265- 1 TATCCCA
TC-rich repeatscis-acting element
involved in defense and stress responsiveness
1283+ 1 GTTTTCTTAC
TCA Not mentioned 295- 1 TCATCTTCAT
TCT-motif part of a light responsive element 167- 1 TCTTAC
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
363-, 565- 2 TGACG
Unnamed__1 Not mentioned 220+ 1 CGTGG
Unnamed__2 Not mentioned 858+ 1 AACCTAACCT
Unnamed__4 Not mentioned
121-, 1138+, 464-, 1430+, 223-, 1166-, 843+, 1471-
1 CTCC
W box Not mentioned 672+ 1 TTGACCas-1 Not mentioned 363-, 565- 2 TGACG
chs-CMA1a part of a light responsive element 329+, 909+ 2 TTACTTAA
>orange1.1g032264m(CsHVA22d/CsHVA22d*
AAGAA-motif Not mentioned 1388+ 1 GAAAGAA
ABREcis-acting element
involved in the abscisic acid responsiveness
785-, 182+, 442-, 442+,
1368+,1369+, 6
GCAACGTGTCACGTG
TACGTGCACGTA
AREcis-acting regulatory
element essential for the anaerobic induction
185-, 550- 2 AAACCA
AT1-motif part of a light responsive module 1012- 1 AATTATTTTTTATT
AuxRR-corecis-acting regulatory
element involved in auxin responsiveness
1208- 1 GGTCCAT
Box 4part of a conserved DNA module involved in light
responsiveness903- 1 ATTAAT
CAT-boxcis-acting regulatory
element related to meristem expression
1400+ 1 GCCACT
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
264-, 1416+ 2 CGTCA
ERE Not mentioned 302+, 653+ 2 ATTTTAAAG-Box cis-acting regulatory 181-, 442-, 4 CACGTT
element involved in light responsiveness
1368+, 1331+
TACGTGACACGTG(G/
t)CACC
GC-motifenhancer-like element
involved in anoxic specific inducibility
1382- 1 CCCCCG
MBSMYB binding site
involved in drought-inducibility
1224+ 1 CAACTG
MYB
involved in drought-inducibility 11+, 1300-,
1233+, 532-, 1224+
5
CAACAGCAACCATAACTGCAACTG
MYC Not mentioned 278-, 1153+, 489-, 1360- 4 CATTTG
CATGTG
O2-sitecis-acting regulatory
element involved in zein metabolism regulation
772- 1 GATGACATGG
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
254+, 1416- 2 TGACG
Unnamed__1 60K protein binding site 183+, 939-, 879-, 1370+ 4 CGTGG
GAATTTAATTAA
Unnamed__4 Not mentioned
63+, 817+, 732+, 1150+, 726+, 937+,
798+
7 CTCC
WRE3 Not mentioned 1120+ 1 CCACCTWUN-motif Not mentioned 666- 1 AAATTTCTT
as-1 Not mentioned 254+, 1416- 2 TGACG
chs-CMA2a part of a light responsive element 174+ 1 TCACTTGA
>orange1.1g033043m(CsHVA22e) ARE
cis-acting regulatory element essential for the
anaerobic induction
427+ 1 AAACCA
AT1-motif part of a light responsive module 800+ 1 AATTATTTTTTATT
Box 4part of a conserved DNA module involved in light
responsiveness
23+, 1161-, 324+, 224+,
801+
5 ATTAAT
CAT-boxcis-acting regulatory
element related to meristem expression
618+ 1 GCCACT
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
768+ 1 CGTCA
GARE-motif gibberellin-responsive element 786+ 1 TCTGTTG
GATA-motif part of a light responsive element 1143+ 1 GATAGGG
GT1-motif light responsive element 1296- 1 GGTTAA
MYB involved in drought-inducibility
787-, 1297+ 2 CAACAGTAACCA
MYC Not mentioned 486-, 598+, 34+, 1120+ 4 CATGTG
CATTTG
P-box gibberellin-responsive element 733- 1 CCTTTTG
STRE Not mentioned 960+, 1306+ 2 AGGGGSp1 light responsive element 776- 1 GGGCGG
TCCC-motif part of a light responsive element 1454+ 1 TCTCCCT
TCT-motif part of a light responsive element 1370-, 1388- 2 TCTTAC
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
768- 1 TGACG
Unnamed__4 Not mentioned 218-, 1309-, 1125-,
1455+, 635-, 1384+,
1292+, 287+, 1088+
9 CTCC
as-1 Not mentioned 768- 1 TGACG
>orange1.1g047167m(CsHVA22f)
ABREcis-acting element
involved in the abscisic acid responsiveness
1479+ 1 ACGTG
AREcis-acting regulatory
element essential for the anaerobic induction
479+ 1 AAACCA
Box 4part of a conserved DNA module involved in light
responsiveness111+, 1263- 2 ATTAAT
CGTCA-motifcis-acting regulatory
element involved in the MeJA-responsiveness
1477- 1 CGTCA
ERE Not mentioned 73-, 594-, 473+, 816- 4 ATTTCATA
ATTTTAAA
G-boxcis-acting regulatory
element involved in light responsiveness
1478- 1 CACGTC
LTR
cis-acting element involved in low-
temperature responsiveness
962+ 1 CCGAAA
MREMYB binding site involved in light responsiveness
631+ 1 AACCTAA
MYB involved in drought-inducibility
118-, 1287-, 1199+ 3 CAACAG
TAACCAMyc Not mentioned 284-, 352- 2 TCTCTTA
O2-sitecis-acting regulatory
element involved in zein metabolism regulation
1475+ 1 GTTGACGTGA
P-box gibberellin-responsive element 1334- 1 CCTTTTG
TATA Not mentioned 885- 1 TATAAAAT
TCA-elementcis-acting element
involved in salicylic acid responsiveness
482+ 1 CCATCTTTTT
TCCC-motif part of a light responsive element 1046+ 1 TCTCCCT
TGACG-motifcis-acting regulatory
element involved in the MeJA-responsiveness
1477+ 1 TGACG
Unnamed__4 Not mentioned649-, 1424+, 1047+, 960+,
1132-5 CTCC
Unnamed__6 Not mentioned 889+ 1 TATAAATATCTWUN-motif Not mentioned 173+ 1 AAATTACTA
as-1 Not mentioned 1477+ 1 TGACG
chs-CMA1a part of a light responsive element 347+ 1 TTACTTAA
Supplementary material 5. Amino acid sequences of HV22 from C. clementina and C. sinensis. The HVA22-pfam03134 functional domain is indicated in gray. Putative phosphorylation sites are indicated in red. Putative glycosylation sites are indicated in green. Casein kinase (CKI and CKII) phosphorylation site were underlined.
>CcHVA22aMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQFVSDHQVEFRFVRTLFMKTVALVNQTVKEIIHPVPTQANRAIEGPPESIPDSQSDNED
>CcHVA22bMQNFACATLLHWLLLALNPYIKGSETNARPKKKVGLKSDFWGSSLRVPLFNFVKLARKNHFEALGPVNSIAPNTQKSQTNKGRHLKQLMGARGSNNNNFLQVVVNNFDVLALPVVTLVYPLHASIKAIEARSASDDQQWLTYWVLYSMITLFELTFAKVLELITIWPYAKLIFSCWLVLPQFNGAAYVYRHFVRPFYMNPQSASSKIWYVPRKKNIFRQQDDILTAAEKYMQEHGTESFERLIAKTEREERSRKSNNYMIFDDDYRY
>CcHVA22cMGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
>CcHVA22c*MGVFFHLGHLLRYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
>CcHVA22dMSRFWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHRKSSPTGTGKGKNKFVDFIMPKKGEHEAY
>CcHVA22eMGVLAVIAKRLDALIGPGVMLLYPLYASLRAIESPSTLDDQQWLTYWIIYSFITLFELSCYKVLAWLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
>CcHVA22fYISLETLERPSAPDYRQWMTYWIILSLVTTFEMLCWKTLGWFPVPNFIWAYLKLLIFVWLALPIFNGACFFYEKFIRVYYNNYVRRHLNNIIGV
>CsHVA22aMALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSI
AEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMSQFVSDHQVEFRFVRTLFMKTVALVNQTVKEIIHPVPTQANRAIEGPPESIPDSQSDNED
>CsHVA22a*MALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQILESVNGEMVRTCDFKL
>CsHVA22bMGARGSNNNNFLQVVVNNFDVLALPVVTLVYPLHASIKAIEARSASDDQQWLTYWVLYSMITLFELTFAKVLELITIWPYAKLIFSCWLVLPQFNGAAYVYRHFVRPFYMNPQSASSKIWYVPRKKNIFRQQDDILTAAEKYMQEHGTESFERLIAKTEREERSRKSNNYMIFDDDYRY
>CsHVA22b* MGCVIFNRHASIKAIEARSASDDQQWLTYWVLYSMITLFELTFAKVLELITIWPYAKLIFSCWLVLPQFNGAAYVYRHFVRPFYMNPQSASSKIWYVPRKKNIFRQQDDILTAAEKYMQEHGTESFERLIAKTEREERSRKSNNYMIFDDDYRY
>CsHVA22cMGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
>CsHVA22dMSRFWNLIYGVHSLAGPVLMLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHRKSSPTGTGKGKNKFVDFIMPKKGEHEAY
>CsHVA22d*MLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHRKSSPTGTGKGKNKFVDFIMPKKGEHEAY
>CsHVA22e MGVLAVIAKRLDALIGYASLRAIESPSTLDDQQWLTLPFWAYMKLLFCMWLVLPMFHGAAYIYEKHIRRYVKIGGYVSPSSNYTADQRKVLQMMSLDARKSVSQYVEKHGWEAVERAIKAAEKETKKR
>CsHVA22fYISLETLERRSVQDYRQWMTYWILLSLVTTFEMLCWKTLGWFPVPNFIWAYLKLLIFIWLALPIFNGARFFYEKFIRVYYNNYVRRHLNNIIGV
Supplementary material 6. Amino acid sequence identity between CcHVA22 and CsHVA22 proteins.
CcHVA22a CcHVA22b CcHVA22c CcHVA22c* CcHVA22d CcHVA22e CcHVA22f CsHVA22a CsHVA22a* CsHVA22b CsHVA22b* CsHVA22c CsHVA22d CsHVA22d* CsHVA22e CsHVA22f
CcHVA22a 100% 34% 35% 36% 33% 35% 30% 100% 94% 34% 34% 35% 33% 34% 28% 29%
CcHVA22b 100% 62% 62% 57% 43% 41% 34% 34% 100% 97% 62% 57% 57% 34% 43%
CcHVA22c 100% 93% 60% 44% 40% 35% 35% 62% 59% 100% 60% 59% 33% 41%
CcHVA22c* 100% 58% 42% 40% 36% 36% 62% 62% 100% 58% 58% 32% 41%
CcHVA22d 100% 52% 44% 33% 33% 57% 57% 60% 100% 100% 39% 44%
CcHVA22e 100% 49% 35% 36% 43% 41% 44% 52% 53% 81% 47%
CcHVA22f 100% 30% 30% 39% 43% 40% 44% 44% 47% 94%
CsHVA22a 100% 94% 34% 34% 35% 33% 34% 28% 29%
CsHVA22a* 100% 34% 34% 35% 33% 34% 25% 29%
CsHVA22b 100% 95% 62% 57% 57% 34% 44%
CsHVA22b* 100% 59% 57% 57% 34% 44%
CsHVA22c 100% 60% 59% 33% 41%
CsHVA22d 100% 100% 39% 44%
CsHVA22d* 100% 39% 44%
CsHVA22e 100% 47%
CsHVA22f 100%
Supplementary material 7. Analysis of the expression of the HVA22 genes of C. sinensis in different tissues
Supplementary material 8. PCR screening of transgenic lines using CcHVA22d specific primers. M: 1kb molecular marker; L1-L5: CcHVA22d transgenic lines; WT: non transformed plant; -DNA: PCR reaction without DNA.
