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Assist. Prof. Emrah Ruh NEU Faculty of Medicine Department of Medical Microbiology Bacterial Cell...

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  • Slide 1
  • Assist. Prof. Emrah Ruh NEU Faculty of Medicine Department of Medical Microbiology Bacterial Cell Structure
  • Slide 2
  • Bacterial cell structure Cytoplasmic structures Nucleoid Ribosome Cytoplasmic membrane Cell wall External structures Cytoplasmic structures Nucleoid Ribosome Cytoplasmic membrane Cell wall External structures
  • Slide 3
  • Bacterial cell structure Nucleoid Prokaryotes: No true nucleus; no nuclear membrane, no nucleolus Bacterial chromosome: Single, double- stranded circle found in the nucleoid
  • Slide 4
  • Bacterial cell structure Ribosome Prokaryotic cell: 70S ribosome (30S + 50S subunits) Eukaryotic cell: 80S ribosome (40S + 60S subunits)
  • Slide 5
  • Bacterial cell structure Cell membrane Lipid bilayer structure Does not usually contain sterols
  • Slide 6
  • Bacterial cell structure Cell membrane Functions Selective permeability and transport of solutes Electron transport and oxidative phosphorylation Excretion of hydrolytic exoenzymes Functioning in DNA and cell wall synthesis Bearing the receptors of the chemotactic and other sensory transduction systems
  • Slide 7
  • Bacterial cell structure Cell membrane Mesosome: Folded invaginations in the cytoplasmic membrane Bind and pull apart daughter chromosomes during cell division
  • Slide 8
  • Bacterial cell structure Cell membrane Transport of substances 1. Passive transport Simple diffusion, faciliated diffusion, channel proteins 2. Active transport Ion-coupled transport, ATP-binding cassette (ABC) transport 3. Group translocation 4. Special transport process
  • Slide 9
  • Bacterial cell structure Cell membrane Transport of substances 1. Passive transport: (Diffusion; no energy) A. Simple diffusion: Not selective; (eg, dissolved O 2, CO 2, and H 2 O) B. Faciliated diffusion: Selective C. Channel proteins: Rare in prokaryotes; selective channels passage of specific molecules (eg, glycerol)
  • Slide 10
  • Bacterial cell structure Cell membrane Transport of substances 1. Passive transport: (Diffusion; no energy)
  • Slide 11
  • Bacterial cell structure Cell membrane Transport of substances 2. Active transport: A. Ion-coupled transport: I. Uniport: single transport of a solute II. Symport: cotransport of a solute and H + in same direction III. Antiport: transport of two similar solutes in opposite directions
  • Slide 12
  • Bacterial cell structure Cell membrane Transport of substances 2. Active transport: A. Ion-coupled transport
  • Slide 13
  • Bacterial cell structure Cell membrane Transport of substances 2. Active transport: B. ATP-binding cassette (ABC) transport: Uses ATP Binding proteins Gram-negative bacteria periplasmic space Gram-positive bacteria outer surface of the cell membrane
  • Slide 14
  • Bacterial cell structure Cell membrane Transport of substances 2. Active transport: B. ATP-binding cassette (ABC) transport: Bound substrate is transferred to a membrane- bound protein complex Hydrolysis of ATP Energy membrane pore open movement of substrate into the cell
  • Slide 15
  • Bacterial cell structure Cell membrane Transport of substances 2. Active transport: B. ATP-binding cassette (ABC) transport
  • Slide 16
  • Bacterial cell structure Cell membrane Transport of substances 3. Group translocation: Uptake of certain sugars (glucose, mannose) Not active transport Phosphotransferase system: Membrane carrier protein phosphorylated (phosphoenolpyruvate) binds the free sugar transport into the cytoplasm: sugar phosphate
  • Slide 17
  • Bacterial cell structure Cell membrane Transport of substances 3. Group translocation:
  • Slide 18
  • Bacterial cell structure Cell membrane Transport of substances 4. Special transport process: Iron (Fe): essential nutrient for bacteria Siderophores transport Fe into the cell
  • Slide 19
  • Bacterial cell structure Cell membrane Transport of substances 4. Special transport process:
  • Slide 20
  • Bacterial cell structure Cytoplasmic structures Nucleoid Ribosome Cytoplasmic membrane Cell wall External structures Cytoplasmic structures Nucleoid Ribosome Cytoplasmic membrane Cell wall External structures
  • Slide 21
  • Bacterial cell structure Cell wall Distinguish Gram-positive from Gram-negative bacteria Most prokaryotes Peptidoglycan (murein) layer Rigidity, and the shape of the bacterial cell
  • Slide 22
  • Bacterial cell structure Cell wall
  • Slide 23
  • Gram-positive bacteria Peptidoglycan Teichoic acid Lipoteichoic acid Gram-positive bacteria Peptidoglycan Teichoic acid Lipoteichoic acid Gram-negative bacteria Peptidoglycan Periplasmic space Outer membrane Proteins Lipopolysaccharide Gram-negative bacteria Peptidoglycan Periplasmic space Outer membrane Proteins Lipopolysaccharide
  • Slide 24
  • Bacterial cell structure Cell wall Peptidoglycan Gram-positive bacteria: Thick peptidoglycan; ~40 sheets (50% of the cell wall) Gram-negative bacteria: Thin peptidoglycan; 1 or 2 sheets (5-10% of the cell wall)
  • Slide 25
  • Bacterial cell structure Cell wall Peptidoglycan Peptidoglycan layer; Provides the strength to the bacterial cell wall Provides the osmotic stability to the bacterial cell Synonyms: Murein, mucopeptide
  • Slide 26
  • Bacterial cell structure Cell wall Peptidoglycan Lysozyme (enzyme in tears, saliva and nasal secretions) degrades the peptidoglycan Hypotonic media Osmotic pressure differences water flows into the cell cell lysis
  • Slide 27
  • Bacterial cell structure Cell wall Peptidoglycan Isotonic media: Gram-positive bacteria Lysozyme Protoplasts Gram-negative bacteria EDTA-lysozyme Spheroplasts If protoplasts/spheroplasts are able to grow and divide, they are called L-forms.
  • Slide 28
  • Bacterial cell structure Cell wall Peptidoglycan Lysozyme treatment protoplasts
  • Slide 29
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Peptidoglycan: Glycan portion: N-acetylglucosamine (GlcNAc, NAG) N-acetylmuramic acid (MurNAc, NAM) Peptide portion: Tetrapeptide side chains Peptide cross-bridges Peptidoglycan: Glycan portion: N-acetylglucosamine (GlcNAc, NAG) N-acetylmuramic acid (MurNAc, NAM) Peptide portion: Tetrapeptide side chains Peptide cross-bridges
  • Slide 30
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transglycosylation: NAM-NAG are linked together ( -1,4 glycosidic bond) Enzyme: Transglycosylase
  • Slide 31
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transpeptidation: Peptide chains attach to N-acetylmuramic acid Enzyme: Transpeptidase
  • Slide 32
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transpeptidation: Pentapeptide: L-Alanine (L-Ala) D-Glutamate (D-Glu) L-Lysine (L-Lys) / Diaminopimelic acid (DAP) D-Alanine (D-Ala)
  • Slide 33
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transpeptidation: Pentapeptide: The terminal D-Alanine (D-Ala) from pentapeptide is removed by transpeptidase and carboxypeptidase enzymes In mature peptidoglycan, peptide chains are tetrapeptides
  • Slide 34
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transglycosylase, transpeptidase and carboxypeptidase enzymes are called Penicillin-binding proteins (PBPs)
  • Slide 35
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transpeptidation: Gram-negative bacteria: Diaminopimelic acid of one tetrapeptide and terminal D-alanine of second tetrapeptide are directly linked
  • Slide 36
  • Bacterial cell structure Cell wall Peptidoglycan synthesis Transpeptidation: Most Gram-positive bacteria: L-lysine of one tetrapeptide and D-alanine of second tetrapeptide are linked by pentaglycine (Gly 5 ) cross-bridge
  • Slide 37
  • Bacterial cell structure Cell wall Peptidoglycan synthesis L-Ala D-Glu DAP / L-Lys D-Ala Gly 5
  • Slide 38
  • Bacterial cell structure Cell wall Teichoic acid / Lipoteichoic acid Gram-positive bacteria Common surface antigens (distinguish bacterial serotypes) Attachment (adherence) to the host cell Important factors in virulence Teichoic acids peptidoglycan Lipoteichoic acids cytoplasmic membrane
  • Slide 39
  • Bacterial cell structure Cell wall Teichoic acid / Lipoteichoic acid
  • Slide 40
  • Bacterial cell structure Cell wall Periplasmic space Gram-negative bacteria The space between the inner and outer membranes Contains the peptidoglycan layer Possess hydrolytic enzymes (proteases, lipases,...) (breakdown of large molecules for metabolism)
  • Slide 41
  • Bacterial cell structure Cell wall Periplasmic space
  • Slide 42
  • Bacterial cell structure Cell wall Outer membrane Gram-negative bacteria Bilayered structure: Inner leaflet similar composition with the cell membrane Outer leaflet contains lipopolysaccharide (LPS)
  • Slide 43
  • Bacterial cell structure Cell wall Outer membrane
  • Slide 44
  • Exclude hydrophobic molecules (unusual feature among biological membranes!) Protect the bacterium (eg, digestive system) Connected to both the peptidoglycan layer and the cytoplasmic membrane Lipoprotein: connects peptidoglycan with outer membrane
  • Slide 45
  • Bacterial cell structure Cell wall Outer membrane Possess special channels (porins): passive diffusion of low-molecular-weight hydrophilic compounds (sugars, amino acids and ions) Large antibiotic molecules penetrate slowly: antibiotic resistance!
  • Slide 46
  • Bacterial cell structure Cell wall Outer membrane
  • Slide 47
  • Bacterial cell structure Cell wall Lipopolysaccharide Lipopolysaccharide (LPS) Endotoxin of Gram-negative bacteria
  • Slide 48
  • Bacterial cell structure Cell wall Lipopolysaccharide O-specific polysaccharide: Induces specific immunity (O-antigen) Common core polysaccharide: Same in all Gram- negative bacteria Lipid A: Responsible for primary toxicity O-specific polysaccharide: Induces specific immunity (O-antigen) Common core polysaccharide: Same in all Gram- negative bacteria Lipid A: Responsible for primary toxicity
  • Slide 49
  • Bacterial cell structure Cytoplasmic structures Nucleoid Ribosome Cytoplasmic membrane Cell wall External structures Cytoplasmic structures Nucleoid Ribosome Cytoplasmic membrane Cell wall External structures
  • Slide 50
  • Bacterial cell structure External structures Capsule/slime layer Flagella Fimbriae (pili)
  • Slide 51
  • Bacterial cell structure External structures Capsule/slime layer Distinct bacterial species Polysaccharide Capsule of Bacillus anthracis Polypeptide (poly-D-glutamic acid)
  • Slide 52
  • Bacterial cell structure External structures Capsule/slime layer Capsule condensed layer; closely surrounds the bacterium Slime layer loosely adherent; nonuniform in density and thickness Capsule/slime layer: also called glycocalyx
  • Slide 53
  • Bacterial cell structure External structures Capsule/slime layer Protects bacteria against phagocytosis
  • Slide 54
  • Bacterial cell structure External structures Capsule/slime layer Plays a role in adherence (biofilm formation) Artificial valves, catheters,
  • Slide 55
  • Bacterial cell structure External structures Capsule/slime layer Flagella Fimbriae (pili)
  • Slide 56
  • Bacterial cell structure External structures Flagella
  • Slide 57
  • Thread-like appendages Composed of protein subunits called flagellin Subunits aggregate and form a helical structure Highly antigenic (H antigens) If removed by mechanical agitating; new flagella are rapidly formed and motility is rapidly restored
  • Slide 58
  • Bacterial cell structure External structures Flagella Types of arrangements of flagella: Monotrichous single polar flagellum Amphitrichous single polar flagella opposite sites Lophotrichous multiple polar flagella opposite sites Peritrichous flagella distributed over the entire cell
  • Slide 59
  • Bacterial cell structure External structures Flagella
  • Slide 60
  • Hook: Short curved structure Joint between the basal body and the flagellum Basal body: Set of rings 1 pair (M-S ring) in Gram- positive bacteria; 2 pairs (L-P, M-S) in Gram- negative bacteria
  • Slide 61
  • Bacterial cell structure External structures Flagella Gram-negativeGram-positive
  • Slide 62
  • Bacterial cell structure External structures Flagella
  • Slide 63
  • Electric field and proton gradient across the membrane: Proton motive force Flow of protons through the motor; From the periplasmic space, to the cell membrane and the cytoplasm
  • Slide 64
  • Bacterial cell structure External structures Flagella Chemotaxis: Moving toward (run, swim) food and away (tumble) poisons Rotation of the flagellum: Counterclockwise (run); clockwise (tumble)
  • Slide 65
  • Bacterial cell structure External structures Flagella
  • Slide 66
  • Bacterial cell structure External structures Capsule/slime layer Flagella Fimbriae (pili)
  • Slide 67
  • Bacterial cell structure External structures Fimbriae (pili) Gram-negative bacteria Shorter and finer than flagella Composed of protein subunits called pilins Adhesins: minor proteins at the tips of pili; responsible for attachment
  • Slide 68
  • Bacterial cell structure External structures Fimbriae (pili) Ordinary pili: Adherence of bacteria to host cells Sex pili: Attachment of donor and recipient cells in bacterial conjugation
  • Slide 69
  • Bacterial cell structure Endospores (spores) Distinct bacterial genera; the most commons: Bacillus (Gram-positive aerobic rod) Clostridium (Gram- positive anaerobic rod) Response to environmental conditions (depletion of nutrients)
  • Slide 70
  • Bacterial cell structure Endospores (spores) Cannot be stained with Gram (seen colourless) BacillusClostridium Spore
  • Slide 71
  • Bacterial cell structure Endospores (spores) Special staining techniques (eg, malachite green stain) Bacillus Spore
  • Slide 72
  • Bacterial cell structure Endospores (spores) Sporulation formation of spore Liberated when the mother cell undergoes autolysis Resting cell; highly resistant to desiccation, heat, and chemical agents Germination favorable nutritional conditions; activation of spore to produce a single vegetative cell
  • Slide 73
  • Bacterial cell structure Endospores (spores) Sporulation
  • Slide 74
  • Bacterial cell structure Endospores (spores) Parts of spores (from in to outwards): Core Spore wall Cortex Coat Exosporium Core
  • Slide 75
  • Bacterial cell structure Endospores (spores) Core The core: is the spore protoplast Contains chromosome Does not contain ATP (energy of germination is stored as 3-phosphoglycerate) Heat resistance of spores; Dehydrated state Calcium dipicolinate found in the core
  • Slide 76
  • Bacterial cell structure Endospores (spores) Spore wall Spore wall: Contains normal peptidoglycan Becomes the cell wall of the germinating vegetative cell
  • Slide 77
  • Bacterial cell structure Endospores (spores) Cortex Cortex: The thickest layer of the spore envelope Contains an unusual type of peptidoglycan Fewer cross-links Extremely sensitive to lysozyme Autolysis plays a role in spore germination
  • Slide 78
  • Bacterial cell structure Endospores (spores) Coat Coat: Composed of a keratin-like protein Impermeable resistance of spores against antibacterial chemical agents
  • Slide 79
  • Bacterial cell structure Endospores (spores) Exosporium Exosporium: The outermost layer of spore envelope Composed of proteins, lipids, and carbohydrates Consists of a paracrystalline basal layer and a hairlike outer region
  • Slide 80
  • Bacterial cell structure Classification Gram-staining feature Gram-positive Gram-negative Morphology Coccus, bacillus, coccobacillus,
  • Slide 81
  • Bacterial cell structure Classification Gram staining Introduced by Hans Christian Joachim Gram Based on the differences of Gram-positive and Gram-negative cell wall
  • Slide 82
  • Bacterial cell structure Classification Gram staining Basic principle: Crystal violet gets trapped in the thick and cross-linked peptidoglycan of Gram-positive bacteria Gram-negative bacteria (thin peptidoglycan) are easily decolorized by alcohol and do not retain crystal violet
  • Slide 83
  • Bacterial cell structure Gram staining Crystal violet Lugol (iodine) Alcohol Safranin (fuchsin) Crystal violet Lugol (iodine) Alcohol Safranin (fuchsin)
  • Slide 84
  • Bacterial cell structure Classification Gram staining
  • Slide 85
  • Gram-positiveGram-negative
  • Slide 86
  • Bacterial cell structure Classification Morphology (basic) Coccus spherical Bacillus rod-shaped Coccobacillus transition form
  • Slide 87
  • Bacterial cell structure Classification Morphology Gram-positive cocci Gram-negative cocci
  • Slide 88
  • Bacterial cell structure Classification Morphology Gram-positive bacilli Gram-negative bacilli
  • Slide 89
  • Bacterial cell structure Classification Morphology Gram-negative coccobacilli

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