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Big Flowchart Outlined - SEA-PHAGES · t ample e y er er es y esuspend hage hage with ALL edia er e...

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Collect Environmental Sample Collect Lysate from Plate with Highest Plaque Density Spot Titer Full Plate Titer Prepare Webbed Plates Plaque Assay Pick a Plaque & Resuspend Serially Dilute Sample with Phage Extract Phage with SMALL Volume of Media Spin & Filter to Remove Particulate & Bacteria Test for Phage by Plaque Assay Extract Phage with LARGE Volume of Media Spin & Filter to Remove Particulate & Bacteria Add Host Bacteria & Incubate Spin to Remove Host Bacteria Test for Phage by Spot Test Collect Lysate from Webbed Plates Spot Titer Full Plate Titer ? Sample Contains Phage? ? Plaque Morphologies Consistent? ? Titer > 10 pfu/ml? 9 ISOLATION PURIFICATION Image by Electron Microscopy MICROSCOPY AMPLIFICATION Compare Phages by Restriction Digest of DNA & Gel Electrophoresis Extract Phage DNA EXTRACTION CHARACTERIZATION Archive & Create phagesDB Entry
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Page 1: Big Flowchart Outlined - SEA-PHAGES · t ample e y er er es y esuspend hage hage with ALL edia er e ia y y hage with GE edia er e ia ia e e ia hage est e es er er? hage?? ? t? er

Collect Environmental Sample

Collect Lysate from Plate with Highest Plaque Density

Spot Titer

Full Plate Titer

Prepare Webbed Plates

Plaque Assay

Pick a Plaque & Resuspend

Serially Dilute Sample with Phage

Extract Phage with SMALL

Volume of Media

Spin & Filter to Remove

Particulate & Bacteria

Test for Phage by Plaque Assay

Extract Phage with LARGE

Volume of Media

Spin & Filter to Remove

Particulate & Bacteria

Add Host Bacteria& Incubate

Spin to Remove Host Bacteria

Test for Phage by Spot Test

Collect Lysate from Webbed Plates

Spot Titer

Full Plate Titer

?Sample Contains Phage?

? Plaque Morphologies Consistent?

? Titer > 10 pfu/ml?9

ISOLATION PURIFICATION

Image by Electron Microscopy

MICROSCOPY

AMPLIFICATION

Compare Phages by Restriction Digest of DNA & Gel Electrophoresis

Extract Phage DNA

EXTRACTION

CHARACTERIZATION

Archive & Create phagesDB Entry

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