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BioAcknowledgement• BioScientists and BioStudents who do
science as it is fun and for the sake of it.
• People who support science
• Korean MOST for funding
• Korean MIC for funding (KADO project)
• KRIBB for supporting KOBIC
• KOBIC colleagues
• Dr. Tan Tin Wee and INCOB2007 organizers
Evaluation: 3rd BioWiki contest
Jong Bhak
Korean Bioinformation Center
KRIBB
Korea
http://www.kobic.kr/
BioDisclaimer 3/3
•Everything here is under
(B) BioLicense
http://biolicense.org/
Keyword change in bioinformatics:
• Structure• Sequence
• Large scale• Internet• Interaction & Network• Omics
• Sharing and Communication: – information and project sharing– Collaboration, integration (Bio- projects)– GRID, E-Science, Cyber-infrastructure
• Entrepreneursihp & Industrialization
The tide of time 2/2
–Bioinformation and Bioknowledge must openfree
for maximum creativity and entrepreneurship
Web 2.0Bio 2.0
Introducing BioCC• BioCC: Bio Community Cluster
• Building a virtual community of bioknowledge.
– Making and providing bioknowledge chart that are openfree, comprehensive, and easy to access.
Philosophy of BioCC
• Openfreely
Sharing
data, information, knowledge
Collaboration through infrastructure
Attitude
• “If I’m not the first author, I’m gonna take all my marbles and go home.”
BioWiki• A method of constructing UCC
bioinformation universe.
• BioWiki is a web site name
• BioWiki is also a program based on
Mediawiki Biowiki-2.5 (2007)
• http://biowiki.net/
BioPortal using BioWiki - BioMatrix Biopipeline, BioEngine BioPortal.NET BioPortal using BioWiki - BioMatrix Biopipeline, BioEngine BioPortal.NET
BBiiooPortal.NETPortal.NET
Biowiki contest
1st BioCC BioWiki contest
• 2007 January -> • 2007 February
KOBICBioCC System
도메인 분 야
http://biome.info 생명공학 대중화를 위한 컨텐츠
http://bioprograms.net 생명과학에 필요한 프로그램 스크립트 제공서비스
http://proteinfunction.net 단백질 기능예측
http://biolive.org 생명기원에 대한 가설정리 및 문제 해결방안
http://biopicture.net 생명과학 분야 형광이미지
http://evolomics.net 해조류의 생태 및 계통 ( 진화 )
http://biovideo.org 생명과학 교육 동영상 서비스 (UCC)
http://contactome.org 감염질환 관련 지표물질의 생물학적인 정보구축
http://pharmanome.org 바이오 의약에 관한 국내 /외 동향
http://diseasepedia.net 심혈관 및 동맥경화에 관련된 논문 , 뉴스 공유
http://biozine.org 분자생물학 , 조직학 , 면역학 관련 컨텐츠
http://biocafe.net 생물학적 난제가 무엇이 있는지 그리고 이를 해결하기 위한 공유의 장
http://expressome.org 생물통계관련 분석절차 , 마이크로어레이
http://networkbiology.org Biology Network 들의 개념 및 참고문헌 , 연구자 , 연구기관분류
http://primatome.org 영장류 분류 , 형태 , 행동 및 생태자료
http://koreansnp.org 질환관련 SNP 정의 , 분석방법
http://stemcellbiology.net 줄기세포 연구방법
ResultsResultsResultsResults
참가자 대표 : 안용열
소 속 : KAIST
연락처 : 016-423-4278 / [email protected]
팀원이름 : 이상훈 , 손승우
주제 : Biology network 들의 개념및 참고문헌
연구자 , 연구기관분류
Wiki URL : http://networkbiology.org
1st : http://networkbiology.org Network Biology
2nd : http://expressome.org 생물통계관련 분석절차 , 마이크로어레이
http://pharmanome.org 바이오 의약에 관한 국내 /외 동향
3rd : http://proteinfunction.net Protein Structure and function
http://biozine.org 분자생물학 , 조직학 ,
면역학 관련 Contents
http://stemcellbiology.net Stem Cell Biology
http://biome.info 생명공학 대중화를 위한 컨텐츠 http://contactome.org 감염질환 지표물질의 생물학적인
정보구축
Total 8 teams
Winner
2nd International Biowiki contest
•17 teams participated in it.•Winner: http://biodatabase.org/– Dan Bolser at MPI Berlin
3rd International BioWiki contest
• July 20th to Aug 24th
• Now Open to everyone(teams)• Tools: Biowiki program or Mediawiki• Contestants can pick subject/title and
we provide them with wiki servers.– E.g.: http://biowiki.net/Studentomics
• 1st winner: $500• 2nd place : $300• 3rd places: $200
General Rules of BioWiki • 1. All the information is openfree (copyLefted) and shared
Under BioLicense (http://biolicense.org)
• 2. Good biowiki is the one that
acquires much amount of information and number of users
• 3. Biowiki sites must be easy to use
Biowiki Evaluation
Aug 27th: International experts will evaluate the submitted openhypertext(wiki) sites during the 6th InCoB at Hong Kong.
Aug 27th: Popularity evaluation Anyone who attends Incob2007 can cast a popularity
vote by typing(signing) in their names in Biowiki.net
http://biowiki.net/
BioPipeline Popular Evaluation
•http://biopipe.net/