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BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie [email protected]
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Page 1: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

BIODIVERSITY IBIOL 1051

What are Eukaryotic Microorganisms?

Professor Marc C Lavoie

[email protected]

Page 2: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 3: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 4: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 5: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

1. Eukaryotic Microorganisms are eukaryotic cells

Page 6: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 7: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

2. Eukaryotic Microorganisms are microscopic

Page 8: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 9: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

3. Eukaryotic Microorganisms could be unicellular or

pluricellular

Page 10: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 11: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

4. Size and shape of Eukaryotic Microorganisms

Page 12: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 13: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5. Eukaryotic Microorganisms structures  

Characteristic Prokaryote

 Eukaryote

 a. Chromosome Single circular Paired linear

 b. Chromosome location Nucleoid (no membrane)

  Nucleus (membrane present)

 c. Nucleolus  Absent  Present

 d. Extra chromosomal DNA

 Plasmid

 Mitochondria and Chloroplast

 e. Site of Cellular Respiration

  Cell membrane  Mitochondria

 f. Ribosomes  30S & 50S /70 S 40S & 60S /80 S in cytoplasm (70 S in organelles)

 g. Locomotion Rotating flagella and gliding

Undulating flagella and cilia , and also amoeboid movement

 h. Pili  Sex or attachment pili

 Absent

Page 14: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.1 Cytoplasmic membrane

Page 15: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.2 Cell wall

Page 16: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.3 Chromosomes

Page 17: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.4 Ribosomes

40S

60S

80S

Page 18: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.4 Ribosomes

Page 19: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.5 Nucleus

Page 20: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.6 RNA-polymerase

Eukaryotes more complex than Prokaryotes

Page 21: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Bacteria Archaea Eukarya

Page 22: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.7 Cilia and flagella

Page 23: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.8 Mitochondria

Page 24: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.8 Mitochondria

Flat Tubular Discoid

Page 25: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

5.8 Chloroplast

Page 26: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 27: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

6. Eukaryotic Microorganisms multiplication

Page 28: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

6. Eukaryotic Microorganisms multiplication

Page 29: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

6. Eukaryotic Microorganisms multiplication

Budding

Page 30: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

6. Eukaryotic Microorganisms life cycles

Page 31: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 32: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

7. Diversity of Eukaryotic Microorganisms metabolism ENERGY SOURCE ELECTRON DONNOR CARBON

SOURCE

ORGANISMS

      PROKARYOTES

    AUTO- ALGAE

    (CO2) CERTAIN PROTISTS

  LITHO-   Plants

PHOTO-(Light)

(Inorganic compounds and C1)HETERO-(CH2O)n

None

  ORGANO- AUTO- None

  (Organic compounds) HETERO- Prokaryotes

       

    AUTO- Prokaryotes

   LITHO- HETERO- Prokaryotes

CHEMO-    

(Chemical compounds)   AUTO- Prokaryotes

   ORGANO-

  Prokaryotes

      MOST PROTISTS

  HETERO- FUNGI

      Plants (non-chlorophyllic)

      Animals

       

Page 33: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

What are Eukaryotic Microorganisms?

• 1. Eukaryotic Microorganisms are eukaryotic cells

• 2. Eukaryotic Microorganisms are microscopic • 3. Eukaryotic Microorganisms are unicellular or

pluricellular • 4. Size and shape of Eukaryotic Microorganisms • 5. Eukaryotic Microorganisms structures • 6. Eukaryotic Microorganisms multiplication • 7. Diversity of Eukaryotic Microorganisms

metabolism • 8. Eukaryotic Microorganisms diversity

Page 34: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.
Page 35: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Adl et al 2005

TubulinaeFlabellineaStereomyxidaAcanthamoebidae

AMOEBOZOA Entamoebida

MastigomoebidaPelomyxaEumycetozoaIncertae sedisSpongomonadida

FungiOPISTOKONTA Mesomycetozoa

ChoanomonadaMetazoa

CercozoaHaplosporidia

RHIZARIA Foraminifera

GromiaRadiolaria

GlaucophytaARCHAEPLASTIDA Rhodophyceae

Chloroplastida

CryptophyceaeEUKARYOTA CHROMALVEOLATA Haptophyta

StramenopilesAlveolata

FornicataMalawimonasParabasalia

EXCAVATA Preaxostyla

JakobidaHeteroloboseaEuglenozoa

AncyromonasAposomonadidaeCentrhelida

Incertae sedis Collodictyonidae

EbriaceaSpironemidaeKathablepharidaeStephanopogon

Page 36: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Embley & Martin 2006

Page 37: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 38: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

• Amoeboid locomotion generally with non-eruptive morphologically variable pseudopodia (lobopodia)

AMOEBOZOA

Page 39: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 40: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

OPISTOKONTA

Single posterior cilium without mastigonemes

FUNGI, CHOANOZOA, AND ANIMALS

Page 41: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

OPISTOKONTA

FUNGI

CHOANOZOA

ANIMALS

Page 42: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 43: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

RHIZARIA

• With fine pseudopodia (filopodia) varying as simple, branching, anastomosing, or supported by microtubules (axopodia).

Page 44: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 45: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

ARCHAEPLASTIDA• Photosynthetic plastid with chlorophyll a from an

ancestral primary endosymbiosis with a cyanobacterium– plastid secondarily lost or reduced in some– usually with cellulose cell wall– flat cristae– storage product: starch

• GREEN ALGAE AND PLANTS

Page 46: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

ALGAE

Page 47: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

• GREEN ALGAE AND PLANTS

ARCHAEPLASTIDA

Page 48: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 49: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

CHROMALVEOLATA

Plastid from secondary endosymbiosis with an ancestral archaeplastida

Page 50: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

ALVEOLATES

Page 51: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

CHROMALVEOLATA

Dinoflagellates Apicomplexa Ciliates

Page 52: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

A typical ciliateParamecium

Page 53: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

A flagellate: Trypanosoma

Page 54: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

CHROMISTA

Diatoms

Brown algae

Oomycetes

Page 55: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

MICRO-ORGANISMS

PROKARYOTES EUKARYOTES

BACTERIA ARCHAEA AMOEBOZOA ARCHAEPLASTIDA CHROMALVEOLATA EXCAVATA

VIRUSES

RHIZARIAOPISTOKONTA

Page 56: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

EXCAVATA

• Typically with suspension-feeding groove (cytostome) of the ‘‘excavate’’ type (i.e. homologous to that in Jakoba libera), presumed to be secondarily lost in many taxa

Page 57: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Lecture 3: What are Eukaryotic Microorganisms?

• REFERENCE: MADIGAN, MT, MARTINKO, JM, & PARKER, J. Brock Biology of Microorganisms, 10th ed, 2003, PRENTICE HALL, p.472-498.

• PURVES, WK, SADAVA, D, ORIANS, GH, HELLER, HC. Life, The Science of Biology, 6th ed, 2001, Sinauer Assiciates Inc., p. 476-499.

Page 58: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Lecture 3: What are Eukaryotic Microorganisms?

• WEB Sites:

• http://sciences.aum.edu/bi/BI2033/thomson/binaryfission.html

• http://cwx.prenhall.com/bookbind/pubbooks/brock2/chapter17/deluxe.html

• http://www.slic2.wsu.edu:82/hurlbert/micro101/pages/101lab1.html

• http://www.liunet.edu/cwis/bklyn/acadres/facdev/FacultyProjects/WebClass/micro-web/html-files/chapterA-1.html

Page 59: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Lecture 3: What are Eukaryotic Microorganisms?

• WEB Sites:• http://www.biosci.uga.edu/almanac/bio_103/notes/

may_15.html• www.DennisKunkel.com • http://gened.emc.maricopa.edu/bio/BIO181/BIOBK/

Plantcell.gif • http://gened.emc.maricopa.edu/bio/BIO181/BIOBK/

BioBookCELL2.html#The nucleus • http://mbclserver.rutgers.edu/~sofer/genetics/

Transcription/Transcription7.html • www.sinauer.com

Page 60: BIODIVERSITY I BIOL 1051 What are Eukaryotic Microorganisms? Professor Marc C Lavoie mlavoie@uwichill.edu.bb.

Lecture 3: What are Eukaryotic Microorganisms?

• WEB Sites:

• www.whfreeman.com

• http://tolweb.org/tree/phylogeny.html

• http://ag.arizona.edu/tree/life.html

• http://pearl.spatial.maine.edu/pictures/glossary/ALGAE.jpg


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