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Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

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the how and the why of caring about open science Phill Jones, PhD Head of Publisher Outreach Digital Science @digitalsci @phillbjones [email protected]
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Page 1: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

the how and the why of caring about open science

Phill Jones, PhDHead of Publisher Outreach

Digital Science

@digitalsci@phillbjones

[email protected]

Page 2: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

“The publisher’s new job is to support researchers at every stage of the research cycle” Annette Thomas

Page 3: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Utopia-Thomas Moore1516

Page 4: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Data and as research output

Citable and engaged with

Web of contextual references

Narrative as supplement to data

Page 5: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Open Science ≠ Open Access

A body of work begins with an idea and ends when the impact of that idea has been maximized.

Institutional/funding needs

Research management software, reporting

Personal ImpactAltmetrics, Author profiles

Documentation of findingsPublications, Open data

Doing the ResearchDigital Notebooks, Lab Management Software

Getting an IdeaReference Managers, Social Reading

Page 6: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Barend Mons talking about the ‘European Open Science Cloud’ at APE in January 2016

http://river-valley.zeeba.tv/media/conferences/ape-2016/0101-Barend-Mons/

Page 7: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones
Page 8: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones
Page 9: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

The internet is transforming research and collaboration

Page 10: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones
Page 11: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Science is Increasingly International

Source: ‘The Fourth Age of Research’ by Jonathan Adams, Nature 497, 557-560

Page 12: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Source: Nature News, 19th December 2013http://www.nature.com/news/scientists-losing-data-at-a-rapid-rate-1.14416

Page 13: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

“Investigators are expected to share with other researchers, at no more than incremental cost and within a reasonable time, the primary data, samples, physical collections and other supporting materials created or gathered in the course of work under NSF grants”

http://www.nsf.gov/pubs/policydocs/pappguide/nsf11001/aag_6.jsp#VID4

“NEH is committed to timely and rapid data distribution”

http://www.neh.gov/files/grants/data_management_plans_2012.pdf

Publicly funded research data are a public good, produced in the public interest, which should be made openly available with as few restrictions as possible in a timely and responsible manner.

http://www.rcuk.ac.uk/research/DataPolicy/

Page 14: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Valen, Dan; Blanchat, Kelly (2015): Overview of OSTP Responses. figshare.https://dx.doi.org/10.6084/m9.figshare.1367165.v7

January 2015 - according to Sherpa Juliet, 34 funders required data archiving, 16 encourage it

UK funder data archiving policies

US Governmental funders mandating data deposits

Everybody needs a place to put their data (and the means to organize it)

Page 15: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Two approaches to data repositories

Structured• Data is curated and standards are enforced• Data is gathered with the aim of creating a

super-data set• Easily machine readable• Examples: Genbank, HEASARC

Unstructured• All data types can be stored• Varying degrees of curation• Institutional, publisher, non-profit and private

offerings• Not necessarily machine readable• Examples: Figshare, Dryad, zenodo, Pure

Page 16: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

}Traditional Point of

Contact

Original Idea

Perform Research

Write Article

Submit

Reviews and Revisions

Point of Publication

Maximize Impact

Share Information

Upstream Engagement• Collaborative Authorship• Community Services• Predictive data

Downstream Engagement• COUNTER / usage stats• Altmetrics• Data publishing

Symplectic

Page 17: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

From the bench compliance

Data TypeFundrefGRIDORCID

Digital Lab Notebook

Repository Aggregator

Integrated into workflowIntuitive

Page 18: Biodiversity—A Healthy Ecosystem Thrives on Fresh Ideas (Part 1 of 3), Phil Jones

Thanks.Anyquestions?

@[email protected]


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