CANCERDISCOVERY CONTENTS
ii | CANCER DISCOVERY�MARCH 2015 www.aacrjournals.org
MARCH 2015 ≠ VOLUME 5 ≠ NUMBER 3
A Coding Single-Nucleotide Polymorphism in Lysine Demethylase KDM4A Associates with Increased Sensitivity to mTOR Inhibitors . . . 245
C. Van Rechem, J.C. Black, P. Greninger, Y. Zhao, C. Donado, P.d. Burrowes, B. Ladd,D.C. Christiani, C.H. Benes, and J.R. Whetstine
Précis: A germline coding SNP in the
chromatin-modifying enzyme gene
KDM4A increases its protein turnover
and enhances mTOR inhibitor sensitivity,
suggesting this SNP as a potential
candidate biomarker in NSCLC.
See commentary, p. 228
See article, p. 255
Lysine Demethylase KDM4A Associates with Translation Machinery and Regulates Protein Synthesis . . . . . . . . . . . . . .255
C. Van Rechem, J.C. Black, M. Boukhali, M.J. Aryee, S. Gräslund, W. Haas, C.H. Benes, and J.R. Whetstine
Précis: Cytoplasmic KDM4A modulates
protein synthesis via interaction with
the translation initiation complex, and
inhibition of KDM4A/KDM5A enhances
mTOR inhibitor sensitivity.
See commentary, p. 228
See article, p. 245
Ligand-Independent EPHA2 Signaling Drives the Adoption of a Targeted Therapy–Mediated Metastatic Melanoma Phenotype. . . . . . . . . . 264
K.H.T. Paraiso, M.D. Thakur, B. Fang, J.M. Koomen, I.V. Fedorenko, J.K. John,H. Tsao, K.T. Flaherty, V.K. Sondak, J.L. Messina, E.B. Pasquale, A. Villagra, U.N. Rao, J.M. Kirkwood, F. Meier, S. Sloot, G.T. Gibney, D. Stuart, H. Tawbi, and K.S.M. Smalley
Précis: Chronic BRAF inhibition leads
to AKT–EPHA2-induced melanoma cell
invasion and is associated with metastatic
spread in patients treated with BRAF
inhibitors.
See article, p. 274
RESEARCHBRIEFS
Highlighted research articles . . . . . . . . . . . . . . . . . . . . . . . . . 213
Important news stories affecting the community . . . . . . . . . . . . . . . . . . . . . 218
Next Steps for Cancer Immune Therapy . . . . . . . . . . . . . . .221
Selected highlights of recent articles of exceptional signifi cance from the cancer literature . . . . . . . . . . . . . . 223
For more News and Research Watch, visit Cancer Discovery online at http://CDnews.aacrjournals.org.
In The Spotlight
From Histones to Ribosomes: A Chromatin Regulator Tangoes with Translation . . . . . . 228
S.B. Rothbart, B.M. Dickson, and B.D. Strahl
See article, p. 245
See article, p. 255
Targeting ETV1 in Gastrointestinal Stromal Tumors: Tripping the Circuit Breaker in GIST? . . . . . . . 231
A. Duensing
See article, p. 304
Aberrant Cytokine Production by Nonmalignant Cells in the Pathogenesis of Myeloproliferative Tumors and Response to JAK Inhibitor Therapies . . . . . . . . . . . . .234
L. Belver and A.A. Ferrando
See article, p. 316
Predicting Cancer Drug Response: Advancing the DREAM . . . . . . . . . 237
R.B. Altman
Prospective
Therapeutic Insights from Genomic Studies of Head and Neck Squamous Cell Carcinomas . . . . .239
P.S. Hammerman, D.N. Hayes, and J.R. Grandis
IN THIS ISSUE
NEWSIN BRIEF
NEWSIN DEPTH
RESEARCH WATCH
ONLINE
VIEWS
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MARCH 2015�CANCER DISCOVERY | iii
EPHA2 Is a Mediator of Vemurafenib Resistance and a Novel Therapeutic Target in Melanoma . . . . . . . . . . . . . . . . . . . 274
B. Miao, Z. Ji, L. Tan, M. Taylor, J. Zhang, H.G. Choi, D.T. Frederick, R. Kumar, J.A. Wargo, K.T. Flaherty, N.S. Gray, and H. Tsao
Précis: EPHA2 upregulation confers BRAF inhibitor resistance in melanoma, which can be overcome by treatment with small-molecule inhibitors targeting EPHA2.
See article, p. 264
PRMT5 Is Required for Lymphomagenesis Triggered by Multiple Oncogenic Drivers . . .288
Y. Li, N. Chitnis, H. Nakagawa, Y. Kita, S. Natsugoe,Y. Yang, Z. Li, M. Wasik, A.J.P. Klein-Szanto, A.K. Rustgi, and J.A. Diehl
Précis: PRMT5 cooperates with oncogenic drivers such as cyclin D1 to promote lymphomagenesis via p53 methylation, which alters p53 chromatin occupancy and inhibits proapoptotic p53 target genes.
Combined Inhibition of MAP Kinase and KIT Signaling Synergistically Destabilizes ETV1 and Suppresses GIST Tumor Growth . . . .304
L. Ran, I. Sirota, Z. Cao, D. Murphy, Y. Chen, S. Shukla, Y. Xie, M.C. Kaufmann, D. Gao, S. Zhu, F. Rossi, J. Wongvipat, T. Taguchi, W.D. Tap, I.K. Mellinghoff, P. Besmer, C.R. Antonescu, Y. Chen, and P. Chi
Précis: Targeted destabilization of the lineage-specifi c transcription factor ETV1 via dual KIT/MEK inhibition disrupts an ETV1–KIT positive feedback loop and potently inhibits GIST tumor growth.
See commentary, p. 231
RESEARCHARTICLES
JAK–STAT Pathway Activation in Malignant and Nonmalignant Cells Contributes to MPN Pathogenesis and Therapeutic Response. . . . . . . . . . . . 316
M. Kleppe, M. Kwak, P. Koppikar, M. Riester, M. Keller, L. Bastian, T. Hricik, N. Bhagwat, A.S. McKenney, E. Papalexi, O. Abdel-Wahab, R. Rampal, S. Marubayashi, J.J. Chen, V. Romanet, J.S. Fridman, J. Bromberg, J. Teruya-Feldstein, M. Murakami, T. Radimerski, F. Michor, R. Fan, and R.L. Levine
Précis: Single-cell secretomic profi ling reveals
that JAK–STAT pathway inhibition normalizes
aberrant cytokine production by both malignant
and nonmalignant bone marrow cells in
myeloproliferative neoplasms (MPN).
See commentary, p. 234
Correction
Correction: Comprehensive Genomic Profi ling of Pancreatic Acinar Cell Carcinomas Identifi es Recurrent RAF Fusions and Frequent Inactivation of DNA Repair Genes . . . . . . . . . . . . . . . . . 332
Chromatin-modifying enzymes such as lysine (K)-specific demethylases (KDM)
have been implicated in tumorigenesis. Van Rechem and colleagues identified a
nonsynonymous coding SNP in KDM4A, which increased its protein turnover
and was associated with worse outcome in non–small cell lung cancer. Reduced
KDM4A expression or homozygosity for this SNP increased the sensitivity of
lung cancer cells to mTOR inhibitors. In a second article, Van Rechem and col-
leagues found that KDM4A regulated protein synthesis by interacting with and modulat-
ing the distribution of translation initiation factors in polysome fractions. In addition,
KDM4A depletion or treatment with a JmjC demethylase inhibitor enhanced the sup-
pressive effects of mTOR inhibition on translation initiation. Together, these studies
implicate KDM4A as a potential therapeutic target and a possible biomarker for mTOR
inhibitor therapy. For details, please see the articles by Van Rechem and colleagues on
pages 245 and 255. Cover photo by Johnathan R. Whetstine, of the sculpture Dancing
Peptides by Mara Haseltine.
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2015;5:OF6-332. Cancer Discovery 5 (3)
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