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Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies are composed, the laws that regulate the combination of these elements in the formation of compound bodies, and the phenomena that accompany their exposure to diverse physical conditions”. How does it interact with others or react with its surroundings ? Composition Preparation Reaction What is it made of ? How is it made?
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Page 1: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Chapter 2 – Atoms and Elements

What is chemistry?

“A branch of science which deals with the elementary substances or forms of matter, of which all bodies are composed, the laws that regulate the combination of these elements in the formation of compound bodies, and the phenomena that accompany their exposure to diverse physical conditions”.

How does it interact with others or react with its surroundings ?

Composition

Preparation

Reaction

What is it made of ?

How is it made?

Page 2: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Ex) COFFEE

Composition:

i) Organic Compounds: ii) Inorganic Compounds:

Proteins

Acids

Esters

Sugars

Caffeine

Pesticides

Dissolved Salts

Dissolved minerals

Water

Page 3: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Preparation

Grown

• Biochemical processes make the organic & biological compounds

Roasted

• Heat combined with air burns off undesired compounds & converts some to those that give flavor

• Caffeine is burned off if roasted too long

• Decaffeination

Page 4: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

• Hot water poured over powder, where all water soluble compounds dissolve. The liquid is separated from the bean residue by a filtration.

Preparation

• Pulverization of the bean to increase the surface are to aid extraction process

Ground

Extraction

• Makes it more vulnerable to oxidation affecting taste & shelf life

Page 5: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

• When it sits the element exposed to the air the organic compounds oxidizes causing a bitter taste.

Reaction with Surroundings

• Stimulant – increases heart rate by promoting adrenaline production

Caffeine

Burns

• Diuretic – stimulates urine production

Page 6: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Where does chemistry fit?

What is the purpose of modern chemistry?

1) Physical chemistry/chemical physics

Thermodynamics

Kinetics

Spectroscopy

Quantum Mechanics

Page 7: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

2) Analytical/Environmental Chemistry

Quantification and identification techniques

Separation Methods

Development of New instrumentation

Forensic/Environmental Chemistry

Page 8: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

3) Preparative Chemistry

Synthesis of new organic compounds

Material Science

Pharmaceutical Chemistry

Synthesis of new inorganic compounds

Page 9: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

4) Biochemistry/Molecular Biology

Chemical processes of Life

Exploration of DNA

Rational Drug Design

Structure and function of proteins

Page 10: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Atomic Theory

Greeks

Aristotle

Plato

Atom ( A – not, tomos – to cut)

- Revelation of truth through logic

- Cosmic order - Hierarchy of being

Page 11: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Atomic Theory

Greeks

Five perfect shapes

TetrahedronCubeOctahedronDodecahedronIcosahedron

Five elements

FireWaterWindEarthEther Technology

Steam Engines Organs Jewelry Reinforced Concrete

Page 12: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Medieval Times

Alchemy

Transmutation of lead into gold.

“Understanding God’s Creation”“Moral Teachings From Nature”

Religious Society

Communal

Static

God Centered , Hierarchical

No Individual Identity

Cycles of Life and NaturePreordained unchangeable OrderNo Change

Page 13: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Chemical knowledge of the timeCoal/Peat Fuel

Beer/Wine

Fragrances/Extracts

Glass/Ceramics

Metal work: - steel - pewter - quicksilver - jewelry

Poisons/Medicines

Pigments/Dyes

Salt Production

Distillation

Page 14: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Enlightenment

Scientific Method

Determinism

Times of Change/Discovery

“ Mechanistic Understanding of the Universe”

- French and American Revolution.

- Industrial Revolution

Mechanistic Thinking

Materialism Earth Centered

Individualism Career Scientist

- Rapid exploration of chemistry began: New Elements Natural Products Synthetic Methods

Page 15: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Lavoisier 1785 “Conservation of mass”

Joseph Proust 1794 “Law of Definite Proportions”

John Dalton 1808 “Atomic Theory of Matter”

1. All matter consists of solid and indivisible atoms.

2. All of the atoms of a given chemical element are identical in mass and in all other properties.

3. Different elements have different kinds of atoms; these atoms differ in mass from element to element.

4. Atoms are indestructible & retain their identity in all chemical reactions.

5. The formation of a compound from its elements occurs through the combination of atoms of unlike elements in small whole-number ratios.

Page 16: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Modifications Required to Daltons Theory

1. Atoms can be further divided into subatomic particles.

2. Different isotopes of an element have different masses

3. Valid, However some have very similar masses.

4. In nuclear reactions, atoms do not retain their identity.

5. Valid, however, Dalton was unaware that not all elements are made up of single atoms.

Ex) Radium-226 → Radon-222 + a-4

Ex) Protons, neutrons, electrons

Ex) Carbon-12 12.000 u Carbon-13 13.003 u Carbon-14 14.003 u

Ex) Nitrogen-14 14.003 u. Carbon-14 14.003 u.

Page 17: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Ex) Chlorine is a gas composed of diatomic molecules Cl2.

Ex) Bromine is a liquid composed of diatomic molecules Br2.

Elemental Forms

Molecular Gas

Molecular Liquid

H2, N2, O2, F2, and Cl2.

Page 18: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Elemental Forms

Molecular Solids

Atomic Liquids

Ex) I2, P4, and S8.

Atomic Gases

Ex) He, Ne, Ar, Kr, Xe, and Rn .

Ex) Hg, Ga

Infinite Networks

Ex) Metals Diamond Graphite

Page 19: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Graphite (2-D) Diamond (3-D)

Page 20: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Compounds

Molecular

Infinite networks – SiO2 Sand, Glass

Page 21: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Ionic

Complex ions are also possible such as:

SO32-, NO3

-, PO4-

NH4+, H3O+

Page 22: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Properties

Chemical Physical

Is observed without changing a compound/element into another compound/element

Is observed by changing a compound/element into another compound/element.

Melting point

Freezing Point

Density

Chemical Reactions

Energy of Reaction

Combustion

Page 23: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Modern Atomic Theory

In the late 19-th and early 20-th century the basic principles of modern atomic theory were laid down

Radioactivity

Electron

Proton/Nucleus

J.J. Thomson 1896

R. A. Millikan 1909

Henri Becquerel 1896

Marie and Paul Currie 1899

Ernest Rutherford 1919

Neutron J. Chadwick 1932

Page 24: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Electrons

Anode: positive electrode

Cathode Ray Tube

Current flows when tube is evacuated

Hole drilled in tube. Gass entering tube glows

Cathode: negative electrode

Cathode Rays

Page 25: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Electron charge-to-mass ratioJ.J. Thomson – 1897 - cathode rays are negatively

charged particles

CRT with electric and magnetic fields applied at right angles

Beam deflects to positively charged plate

Magnetic field applied to deflected beam

Changes in the deflection behaviour allowed the mass to charge ratio of the electron to be determined at 1.7588202 C/kg

Page 26: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Oil Drop ExperimentR Millikan and H A Fletcher (1909)

Accurate measurement of the electron charge.

Balanced the force of gravity with an opposing electric force

The balancing force between droplets had common factor

He surmised that the charge of a single electrone = 1.60217646 10-19 C

Applying the charge/mass ratio,mass of e = 9.1093819 10-31 kg

Page 27: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

“Canal Rays” and Protons

+Anode

-Cathodee-

e-

e-

++

+

E Goldstein (1850-1930) discovered canal rays in 1886using a “reverse cathode ray” tube

Electrons emitted from the cathode hit gas molecules causing ionization into (more) electrons and leaving positively charged “ions” which travel to the cathodeThose that pass through

the hole (“canal”) can be analyzed for charge-mass ratio, which are much smaller than electron, but largest for hydrogen

E. Rutherford determined that the hydrogen cation is a fundamental particle, and named it the proton

Page 28: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Radioactivity

Three fundamental types of nuclear radiation were identified by how they respond to electric fields by E. Rutherford.

Paul and Marie Currie isolated the radioactive elements Radium and Polonium. They postulated that their spontaneously emitted radiation was the result of nuclear disintegration.

Three types of radiation:

alpha, , beta, , and gamma, .

Page 29: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Radioactivity: propertiesFrom their charge-mass ratios and other experiments of these rays were characterized and identifiedAlpha particles: He2+ nuclei m = 4 amu q =+2)

Beta particles: electron (e-) (identical to cathode rays)

Gamma rays: high-energy light, with wavelengths shorter than X-rays

Page 30: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Rutherford experimentUsing alpha particles, he bombarded a very thin foil of gold and observed deflections using a circular fluorescent screen

Page 31: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

The nuclear atom

Rutherford said of the alpha particles deflected almost straight back.

He tried to prove the plum pudding model of the atom propose by Thomson, which is composed of electrons imbedded in a sphere of uniform positive charge.

Deflection angle and frequency were carefully measured, which led to the conclusions:

1. Most of gold foil is empty space2. There are small centers of highly-positive charge3. Centers have high mass to resist displacement4. Size of atom estimated from distance between centers to be ~10-10 m diameter.5. Size of centers estimated to be ~10-15 m diameter

Centers were called the nucleus.

Electrons occupy the volume of the atom outside the nucleus

Page 32: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Constituents of the atomIn 1920 Rutherford predicted the existence of the neutralparticle with mass equal to that of a proton and electron.

In 1932 Chadwick verified experimentally the existence of the neutron

Relative mass of carbon defined t be 12 u

Page 33: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

The mass spectrometerMass spectrometer is a variation on the CRT, developed by J.J. Thomson, which allows the determination of m/z ratios of cations.

Cations of differing m/z ratio’s can be selected by adjusting the magnetic field strength

Page 34: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Average atomic mass

35Cl has 17 protons and 18 neutrons

37Cl has 17 protons and 20 neutrons

Isotopes are atoms of the same element that differ in mass due to differences in the number of neutrons

The atomic mass of Chlorine is a weighted average between the two isotopes as:

Atomic Mass = Mass(Cl-35) *frac.(Cl-35) + Mass(Cl-37) *frac.(Cl-37) = (34.968)*(0.7537) + (36.956)*(0.2463) = 35.46 u

Page 35: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Defining an Element The atomic mass unit (u) is defined as one twelfth of the mass of a carbon atom containing six protons, six neutrons and six electrons: 1 u = 1.661 × 10-24 g

The mass of an atom in u will be approximately equal to the combined number of protons and neutrons it contains.

C12

6

mass numbersymbol

atomic numberAtomic number (Z) = # protons

Mass number (A) = # protons + # neutrons

The atomic # determines the identity of the element (optional).

If # p’s = #e’s neutral

If # p’s > # e’s cation

If # p’s < # e’s anion

Page 36: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

e.g. Gallium has two naturally occurring isotopes and an average atomic mass of 69.723 u:

Calculate the percent abundance of each isotope of gallium.

69G 71G68.926 u 70.925 u

Exercise

At. Mass = M(69G)*frac(69G) + M(71G)*frac(71G)

frac(69G) + frac(71G) =1 frac(69G) =1- frac(71G) =1-x

At. Mass = M(69G)*(1-x) + M(71G)*x

69.723 = (68.926)*(1-x) + (70.925)*x= 68.926+1.999*x

x =(69.723-68.926)/1.999 = 0.3987 = 39.87 %

Page 37: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

The MoleIt is not practical to work on the scale of individual atoms. It is necessary to work on the macroscopic scale.

It was found that for 6.0221*1023 atoms for any element the mass corresponds to the atomic mass in grams.

Ex) 12.00 g of carbon corresponds to 6.02221*1023 carbon atoms

The same is true for molecules.

Ex) CO2 weighs 12.000 + 2*15.999 = 43.998 u 6.02221*1023 molecules of CO2 weighs 43.998 g

“1 mole = 6.0221 × 1023”

This number, 6.0221*1023, was named after Amedeo

Avogadro who initialyl proposed the idea.

Page 38: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Molar MassThe molar mass of a particle is the mass in grams of one mole, 6.0221*1023, particles

Ex) CO2 has molecular mass of 43.998 u therefore, it has a molar mass of 43.998 g/mol

Exercise: How many moles of Cl2 are there in 105.7g.

The atomic mass of Cl is 35.46 u

# moles Cl2 = mass Cl2/molar mass Cl2 =105.7g/70.92 g/mol = 1.490 moles

The molecular mass of Cl2 is 2*35.46 u = 70.92 u

Its molar mass is 70.92 g/mol.

Ex ) One mole of protons weighs

(6.0221*1023)*(1.67*10-24 g) = 1.01 g

Page 39: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Exercise: What is the mass of carbon dioxide containing 2.57*1021 atoms of oxygen

CO2 contains two O atoms for every CO2 molecule

# CO2 = (# of O)/2 = 2.57*1021/2 = 1.29*1021

# moles CO2 = (# CO2 molecules )/( 6.0221*1023 molecules/mol)

# moles CO2 = (1.29*1021 molecules)/( 6.0221*1023 molecules/mol)

# moles CO2 = 0.00214 mol

How much does this weigh?

mass CO2 = (# moles CO2)*(molar mass of CO2)

mass CO2 = (0.00214 mol)*(43.998 g/mol) = 0.0916 g

Page 40: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Law of Periodicity “The properties of the elements areperiodic functions of atomic number.”

Metals – Conducting, Ductile

Metalloids - Semiconductors Ductile ?

Nonmetals – insulatorsnot ductile

Group Period

Repetition of properties

Similar chemical properties

Page 41: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Overview of the Elements by GroupHydrogen (H)

Has properties of groups 1 and 17 but doesn’t belong to either.Diatomic gas (H2)

Group 1: Alkali Metals (Li, Na, K, Rb, Cs, Fr)

Soft metals that react strongly with Water and oxygen. (reactivity increases with atomic mass)

Do not exist in pure form in nature dueto high reactivity

Readily lose 1 electron to make cations with +1 charge

Unreactive

Page 42: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Group 2: Alkaline Earth Metals (Be, Mg, Ca, Sr, Ba, Ra )

Most are metals that react with water to give X(OH)2 and with oxygen to give XO.

Reactivity increases withatomic mass.

Beryllium does not react with water (Highly toxic)

Do not exist in pure form in nature due to high reactivity

Readily lose 2 electrons to make cations with +2 charge

Page 43: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Groups 3-12: Transition Metals

Group 3 metals lose 3 e- to make +3 cations otherwise act like Group 2 metals

Groups 4-11 are the ‘true’ transition metals in that they lose e- to form coloured compounds in which the metal atom has a positive charge

Groups 11 and 12 mimic the behaviour of Groups 1 and 2 respectively but are less reactive

Page 44: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Copper and gold are the only coloured metals

Silver is the best conductor

Gold is the most malleable metal

Readily lose electrons to make cations

Mercury is the only liquid metal;the rest are solids

The metals in the middle of thetransition groups are hardest Ex) group 6 Cr, Mo, W

The metals at the edges arethe softest (Groups 3 and 12)Ex) Zn and Ga

Page 45: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Group 13 (B, Al, Ga, In, Tl)

Most are metals; Boron is a metalloid

All are solids, Gallium -low m.pt.

Aluminum - industrially important- third most abundant- produces its own protective layer

Lose 3 electrons to make cations with +3 charge

Form compounds in a 1:3 ratio with halogens (e.g. BCl3)

Page 46: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

C is a nonmetal; Si and Ge are metalloids;Sn and Pb are metals

Si is the 2-nd most abundant Element which does occur in pure form but as silicates(compounds made of siliconand oxygen) which form rocks,sand, glass, etc.

Form compounds in a 1:4 ratio with halogens (e.g. CCl4)

Group 14 (C, Si, Ge, Sn, Pb)

Page 47: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Carbon exists in several different Allotropes: 1) graphite2) diamonds3) fullerenes – Many types

Carbon is the backbone atom of organic and biological molecules

CARBON

Page 48: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Group 15: Pnictogens (N, P, As, Sb, Bi)

N and P are nonmetalsAs and Sb are metalloidsBi is somewhat metallic

N is a highly stable diatomic gas (N2)and the most abundant element in the atmosphere

P in three allotropes White, P4 – Fire BombsRed and black, polymers - used in match heads)

Form compounds in a 1:3 ratio with hydrogen (e.g. NH3)

Page 49: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Group 16: Chalcogens (O, S, Se, Te, Po)O, S & Se are nonmetalsTe is a metalloid Po is a metal

O is the most abundant in the earth’s crust & the second most in the atm.

O exists in two allotropes : O2 and O3 both are very reactive gases

S exists in many allotropes: S2, S6, S8, etc.

Form compounds in a 1:2 ratio with hydrogen (e.g. H2O)

Gain 2 electrons to make anions with -2 charge

Page 50: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Group 17: Halogens (F, Cl, Br, I, At)Nonmetals that exist as diatomic molecules (except for astatine which is too unstable to study)

F & Cl are gasesBr is a liquidIodine is a solid

colourful F2 is yellowCl2 is yellow-greenBr2 is red-brownI2 is dark purple

Form compounds in a 1:1 ratio with hydrogen (e.g. HF)

Gain 1 electron to make anions with -1 charge

F most reactive known

Cl2

Br2l2

Page 51: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Group 18: Noble Gases (He, Ne, Ar, Kr, Xe, Rn)

Inert- unreactive gaseous nonmetals

Exist primarily in elemental from

Compounds have beenmade containing Xe Ex) XeF2

Helium low density – BalloonsLow BP - Coolant

XenonUsed as a probe to study structure in porous material

Glow when a current passes

through them:

Ex) Neon Lights

Page 52: Chapter 2 – Atoms and Elements What is chemistry? “A branch of science which deals with the elementary substances or forms of matter, of which all bodies.

Concepts

Chemical & physical properties

Dalton’s atomic theory of matter

Models of the atom

Subatomic particles (protons, neutrons, electrons)

Elemental Forms

Periodic table (groups and periods)

Elements (names and symbols)

Atomic number and mass number

Isotopes, calculating average atomic mass and percent abundance

Avogadro’s number and the mole


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