+ All Categories
Home > Health & Medicine > Cies 2010 literature searching pubmed

Cies 2010 literature searching pubmed

Date post: 27-Jan-2015
Category:
Upload: patrice-chalon
View: 111 times
Download: 3 times
Share this document with a friend
Description:
 
Popular Tags:
29
Tips to search the literature Example with PubMed Patrice CHALON, Msc Knowledge manager, Centre fédéral d'expertise des soins de santé (KCE) 2010-09-10 1 Patrice X. Chalon
Transcript
Page 1: Cies 2010 literature searching pubmed

Tips to search the literatureExample with PubMed

Patrice CHALON, MscKnowledge manager, Centre fédéral d'expertise des soins de santé (KCE)

2010-09-10 1Patrice X. Chalon

Page 2: Cies 2010 literature searching pubmed

Approach

1. Identify your problem

2. Define a structured question

3. Find the best evidence

4. How valid is the study?

5. What are the results?

6. How should I apply the results to patient care?

Source: Guyatt G, Evidence-Based Medicine Working Group. Users' guides to the medical literature : a manual for evidence-based clinical practice. 2nd ed. New York: McGraw-Hill Medical; 2008.

2010-09-10 2Patrice X. Chalon

Page 3: Cies 2010 literature searching pubmed

1. IDENTIFY YOUR PROBLEM

Image source : http://www.flickr.com/photos/crystaljingsr/3914729343/2010-09-10 3Patrice X. Chalon

Page 4: Cies 2010 literature searching pubmed

Example

2010-09-10 4Patrice X. Chalon

Page 5: Cies 2010 literature searching pubmed

2. DEFINE A STRUCTURED QUESTION

Image source : http://www.flickr.com/photos/crystaljingsr/39155140142010-09-10 5Patrice X. Chalon

Page 6: Cies 2010 literature searching pubmed

Example

Source : Horsmans Y, Thiry N, le Polain M, Adler M, Colle I, Delwaide J, Michielsen P, Orlent H, Van Damme P, Hulstaert F. Rapport coût-efficacité du traitement antiviral de l’hépatite B chronique en Belgique. Partie 1: Examen de la littérature et résultats d’une étude nationale. Health Technology

Assessment (HTA). Bruxelles: Centre fédéral d’expertise des soins de santé (KCE). 2010. KCE Reports 127B. D/2010/10.2738/23.

2010-09-10 6Patrice X. Chalon

Page 7: Cies 2010 literature searching pubmed

Example (cont.)

(CHB OR (Hepatitis B ADJ2 Chronic*))

AND

(NA OR (Nuclo?ide ADJ2 analogue) OR (Interferon ADJ3 therap*))

2010-09-10 7Patrice X. Chalon

Page 8: Cies 2010 literature searching pubmed

3. FIND THE BEST EVIDENCE

Image source : http://www.flickr.com/photos/crystaljingsr/39155147242010-09-10 8Patrice X. Chalon

Page 9: Cies 2010 literature searching pubmed

Databases for economic evaluations

Image source : http://www.flickr.com/photos/infomofo/4494714180/

2010-09-10 9Patrice X. Chalon

Page 10: Cies 2010 literature searching pubmed

MEDLINE (PUBMED)http://www.pubmed.gov

2010-09-10 10Patrice X. Chalon

Page 11: Cies 2010 literature searching pubmed

MedLine fact sheet

Producer National Library of Medicine (NLM, USA)

Time coverage

1947-

Source 5400 worldwide journals currently in 30 languages

Topics Basic biomedical research and the clinical sciences, including nursing, dentistry, veterinary medicine, pharmacy, allied health, and pre-clinical sciences, life sciences including some aspects of biology, environmental science, marine biology, plant and animal science as well as biophysics and chemistry.

Content Journal articles

Indexation Medical Subject headings (MeSH), updated annually manual indexation based on full text reading

Abstracts Author-written English abstractsSource : http://www.nlm.nih.gov/pubs/factsheets/medline.html

2010-09-10 11Patrice X. Chalon

Page 12: Cies 2010 literature searching pubmed

PubMed additional content

The out-of-scope citations (e.g., articles on plate tectonics or astrophysics) from certain MEDLINE journals, primarily general science and chemistry journals, for which the life sciences articles are indexed for MEDLINE.

Citations that precede the date that a journal was selected for MEDLINE indexing

Some additional life science journals that submit full text to PubMedCentral and receive a qualitative review by NLM.

2010-09-10 12Patrice X. Chalon

Page 13: Cies 2010 literature searching pubmed

Example

Source : Horsmans Y, Thiry N, le Polain M, Adler M, Colle I, Delwaide J, Michielsen P, Orlent H, Van Damme P, Hulstaert F. Rapport coût-efficacité du traitement antiviral de l’hépatite B chronique en Belgique. Partie 1: Examen de la littérature et résultats d’une étude nationale. Health Technology

Assessment (HTA). Bruxelles: Centre fédéral d’expertise des soins de santé (KCE). 2010. KCE Reports 127B. D/2010/10.2738/23.

2010-09-10 13Patrice X. Chalon

Page 14: Cies 2010 literature searching pubmed

Search 1st concept (patient / pathology)

MeSH database, available from : http://www.ncbi.nlm.nih.gov/sites/entrez?db=MeSH2010-09-10 14Patrice X. Chalon

Page 15: Cies 2010 literature searching pubmed

Check MeSH term

2010-09-10 15Patrice X. Chalon

Page 16: Cies 2010 literature searching pubmed

Major Heading? Explode?

Major Heading Major topics of the article are

usually obtained from the title and/or statement of purpose

Explode Explode option retains all

narrower terms

PubMed explodes by default

Source : http://www.nlm.nih.gov/bsd/disted/mesh/index.html2010-09-10 16Patrice X. Chalon

Page 17: Cies 2010 literature searching pubmed

2010-09-10 17Patrice X. Chalon

Page 18: Cies 2010 literature searching pubmed

PubMed : results

2010-09-10 18Patrice X. Chalon

Page 19: Cies 2010 literature searching pubmed

PubMed : Advanced search

2010-09-10 19Patrice X. Chalon

Page 20: Cies 2010 literature searching pubmed

Search : 2nd concept (therapy)

2010-09-10 20Patrice X. Chalon

Page 21: Cies 2010 literature searching pubmed

Search : 2nd concept (therapy) (cont.)

2010-09-10 21Patrice X. Chalon

Page 22: Cies 2010 literature searching pubmed

PubMed search algorithm

PubMed uses an algorithm to broaden your search, the algorithm associates different terms The algorithm tries to find

adequate MeSH term(s)

The algorithm uses truncation at the end

The search history only retains your query (!!!)

2010-09-10 22Patrice X. Chalon

Page 23: Cies 2010 literature searching pubmed

Search : 2nd concept, term 2

2010-09-10 23Patrice X. Chalon

Page 24: Cies 2010 literature searching pubmed

Combine searches (OR)

2010-09-10 24Patrice X. Chalon

Page 25: Cies 2010 literature searching pubmed

Combine searches (AND)

2010-09-10 25Patrice X. Chalon

Page 26: Cies 2010 literature searching pubmed

2010-09-10 26Patrice X. Chalon

Page 27: Cies 2010 literature searching pubmed

Search 3rd concept (design)

Source : Horsmans Y, Thiry N, le Polain M, Adler M, Colle I, Delwaide J, Michielsen P, Orlent H, Van Damme P, Hulstaert F. Rapport coût-efficacité du traitement antiviral de l’hépatite B chronique en Belgique. Partie 1: Examen de la littérature et résultats d’une étude nationale. Health Technology

Assessment (HTA). Bruxelles: Centre fédéral d’expertise des soins de santé (KCE). 2010. KCE Reports 127B. D/2010/10.2738/23.

2010-09-10 27Patrice X. Chalon

Page 28: Cies 2010 literature searching pubmed

Alternatives

2010-09-10 28Patrice X. Chalon

Page 29: Cies 2010 literature searching pubmed

Thank you!

Copyrights: This work is released under Creative Commons License

2010-09-10 Patrice X. Chalon 29


Recommended