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COMPLEX ADAPTIVE TRAITS )*+!''!%$#"(,& & Newsletter Vol. 4 No. S1 2013
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COMPLEX ADAPTIVE TRAITS
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1
The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the
turtle-specific body plan
Nature Genetics 45: 701-706 (2013) | doi:10.1038/ng.2615 http://www.nature.com/ng/journal/v45/n6/full/ng.2615.html
Zhuo Wang, Juan Pascual-Anaya, Amonida Zadissa, Wenqi Li, Yoshihito Niimura,
Zhiyong Huang, Chunyi Li, Simon White, Zhiqiang Xiong, Dongming Fang, Bo Wang, Yao Ming, Yan Chen, Yuan Zheng, Shigehiro Kuraku, Miguel Pignatelli,
Javier Herrero, Kathryn Beal, Masafumi Nozawa, Juan Wang, Hongyan Zhang, Lili Yu, Shuji Shigenobu, Junyi Wang, Jiannan Liu, Paul Flicek, Steve Searle, Jun Wang,
Shigeru Kuratani, Ye Yin, Bronwen Aken*, Guojie Zhang*, Naoki Irie* ([email protected])
The unique anatomical features of turtles have raised unanswered questions about the
origin of their unique body plan. We generated and analyzed draft genomes of the soft-shell turtle (Pelodiscus sinensis) and the green sea turtle (Chelonia mydas); our results
indicated the close relationship of the turtles to the bird-crocodilian lineage, from which they split ~267.9–248.3 million years ago (Upper Permian to Triassic). We also found
extensive expansion of olfactory receptor genes in these turtles. Embryonic gene expression analysis identified an hourglass-like divergence of turtle and chicken
embryogenesis, with maximal conservation around the vertebrate phylotypic period, rather than at later stages that show the amniote-common pattern. Wnt5a expression was found in
the growth zone of the dorsal shell, supporting the possible co-option of limb-associated Wnt signaling in the acquisition of this turtle-specific novelty. Our results suggest that
turtle evolution was accompanied by an unexpectedly conservative vertebrate phylotypic period, followed by turtle-specific repatterning of development to yield the novel structure
of the shell.
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Nature Genetics 45: 701-706 (2013) | doi:10.1038/ng.2615 http://www.nature.com/ng/journal/v45/n6/full/ng.2615.html
Zhuo Wang, Juan Pascual-Anaya, Amonida Zadissa, Wenqi Li, ŕţ Ǜ¸ , Zhiyong Huang, Chunyi Li, Simon White, Zhiqiang Xiong, Dongming Fang, Bo Wang, Yao Ming, Yan Chen, Yuan Zheng, ĭŮ ůƀ , Miguel
Pignatelli, Javier Herrero, Kathryn Beal, ȘƆ Řœ , Juan Wang, Hongyan Zhang, Lili Yu, ȗÌ ƪŻ , Junyi Wang, Jiannan Liu, Paul
Flicek, Steve Searle, Jun Wang, Íǹ Ƅ , Ye Yin, Bronwen Aken*, Guojie Zhang*, ÕŹ ơů*([email protected])
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2013 ı 4 Ŝ 28 ŗ Science Daily (Science News Aggregator) http://www.sciencedaily.com/releases/2013/04/130428144848.htm 2013 ı 4 Ŝ 28 ŗ Bioscholar (Website) http://news.bioscholar.com/2013/04/reseachers-sequenced-turtle-genome-shed-light-turtle-ancestry-shell-evolution.html 2013 ı 4 Ŝ 28 ŗ BGI (Academic Trend) http://www.genomics.cn/en/news/show_news?nid=99520 2013 ı 4 Ŝ 28 ŗ Science World Report (Science magazine online) http://www.scienceworldreport.com/articles/6520/20130429/turtles-primitive-reptiles-genome-analysis-reveals-evolut-origin-shells.htm 2013 ı 4 Ŝ 29 ŗ jm©£z�¢©�y�©�£'o�Mu��ǬǴȼȌëǬřLşĶ—ƑƥKJĊȥ�©�( http://jp.wsj.com/article/JJ12701818855487113679319742081704269412853.html#printMode 2013 ı 4 Ŝ 29 ŗ Ś¶���v� 'o�Mu��ǬǴȼȌëǬřLşĶ—ƑƥKJĊȥ�©�( http://www.jiji.com/jc/c?g=soc_30&k=2013042900021 2013 ı 4 Ŝ 29 ŗ Red Orbit (Online science magazine) http://www.redorbit.com/news/science/1112833091/turtle-genome-shed-light-on-evolution-shell-042913/ 2013 ı 4 Ŝ 29 ŗ Nature World News (Science magazine online) http://www.natureworldnews.com/articles/1640/20130429/turtles-share-evolutionary-origins-birds-crocodiles-study-finds.htm
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2013 ı 4 Ŝ 29 ŗ Blog on Discover Magazine website http://blogs.discovermagazine.com/gnxp/2013/04/turtles-all-the-way-down/#.UX8XSisd61A 2013 ı 4 Ŝ 29 ŗ EMBL-EBI Press Release “Where do turtles ‘fit’?” http://www.ebi.ac.uk/about/news/press-releases/turtle-genome 2013 ı 4 Ŝ 29 ŗ Ƒƥ�¤z¢¢©z 'u��ǬǴ]_ř^0LKDAo�MƜƒIȌë( http://www.riken.go.jp/pr/press/2013/20130429_1/ 2013 ı 4 Ŝ 29 ŗ ŗƽŕǍ� ŞÝ 30 Ȫ'o�$��]_¦�ÃȽu��ǬǴ ȌëMȎƭŌ`( 2013 ı 4 Ŝ 29 ŗ ƓƽŕǍ ŞÝ 21 Ȫ 'o�Mu��( 2013 ı 4 Ŝ 29 ŗ ƓƽŕǍ(ęȠ) ŞÝ 20 Ȫ 'o� ľƳM!Ǫņ"� Ƒƥ1u��ǬǴ( 2013 ı 4 Ŝ 29 ŗ ŞŗŕǍ� ŞÝ 38 Ȫ 'o�N�ou]_ZľƳLȄ0DA( 2013 ı 4 Ŝ 29 ŗ Ť·ŕǍ 'o� ǀƃşLƍǗȌëȽ( 2013 ı 4 Ŝ 29 ŗ ŷŗŕǍ� ŞÝȸȪ� 'o�Mu��ǬǴ� �ou]_¦�LȄ4ƒƊęșǀƃşLDzƒ( 2013 ı 4 Ŝ 29 ŗ 47NEWS o�ȸÒȹî«ıãLƏċMĝL ƒƊǀƃşLȌëMªų http://www.47news.jp/CN/201304/CN2013042801001803.html 2013 ı 4 Ŝ 30 ŗ ǴĔŕǍ(ęȠ)� ŞÝ 26 Ȫ� 'z��§ăǩ� i�]_=8,!?( 2013 ı 4 Ŝ 30 ŗ ŷŗŕǍ� ŞÝ 26 Ȫ� 'o� ªƗMǪȯN¦�BDA(
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2013 ı 4 Ŝ 30 ŗ Asian Scientist “Turtle Shells Evolved By Recruiting Genes Involved In Limb Development” http://www.asianscientist.com/in-the-lab/turtle-genome-shell-limb-development-2013/ 2013 ı 5 Ŝ 1 ŗ ǴĔŕǍ ĖÝ 'z��§Mȴ ƌ]_DžƻȽ( 2013 ı 5 Ŝ 3 ŗ Nature Middle East http://www.nature.com/nmiddleeast/2013/130502/full/nmiddleeast.2013.65.html 2013 ı 5 Ŝ 8 ŗ CDB ��©z� 'u��ǬǴ0^ř^0LKDAo�MƜƒIȌë( http://www.cdb.riken.go.jp/jp/04_news/articles/13/130508_draftgenomes.html 2013 ı 5 Ŝ 4 ŗ http://www.galileonet.it/articles/5183c80da5717a100a00001c Galileo (Italian magazine) 2013 ı 5 Ŝ 15 ŗ Medill reports (Graduate University website) http://news.medill.northwestern.edu/chicago/news.aspx?id=221301 2013 ı 8 Ŝõ ŗƽwil§z� ĊÙ��©zjm�� 'o�MǽƂĂȮ1źƢ( ��aW�i�sĆĜę��
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