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CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

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CPSC 601 Geometric Algorithms in Biometrics Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova Dr. Marina L. Gavrilova
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Page 1: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

CPSC 601

Geometric Algorithms in BiometricsGeometric Algorithms in Biometrics

Dr. Marina L. GavrilovaDr. Marina L. Gavrilova

Page 2: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Biometric goals

Verify users Identify users Synthesis - recently

Page 3: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Classification of identifiers Physiological biometric identifiers: fingerprints,

hand geometry, eye patterns (iris and retina), facial features and other physical characteristics.

Behavioral identifiers: voice, Signature typing patterns other.

Analyzers based on behavioral identifiers are often less conclusive because they are subject to limitations and can exhibit complex patterns.

Page 4: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Long-Term Goals

Establish acceptable error rates Decrease possibility of error Improve methodology (new

biometrics, combination) Make implementation more robust

Page 5: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Geometric proximity and topology Methods based on concepts of proximity of

geometric sets and extracting and utilizing topological information on the data are:

Techniques for computing the medial axis transform Distance distribution computation using weighted

metric functions Use of Voronoi diagram and Delaunay triangulation

for data processing and matching Topology-based approach for feature extractions

along the boundary Computational geometry methods for pre-processing

and pattern matching Topology-based approach for generation of biometric

information

Page 6: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Outline Distance Distribution Computation Pattern matching Methods for identification and synthesis Feature extraction

Page 7: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Data source

Sensors

Data source

Sensors

Pattern matching

Feature extraction

Data source

Sensors

Identification/Verification

Reporting

Data Collection Decision

Transmission Storage

Compression module Data Base

Processing

Biometric System

Page 8: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Data source

Sensors

Data source

Sensors

Feature extraction

Data pre-processing

Data source

Sensors

Pattern matching

Reporting

Data Collection

Decision

Transmission Storage

Compression module

Data Base

Processing

CG methods

Computational Geometry in Biometrics

Page 9: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Threshold distance

A threshold distance: declare distances less than the threshold as a "match" and those greater to indicate "non-match".

Genuine distribution Inter-template distribution Imposter distribution

Page 10: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Use of metrics Regularity of metric allows to measure

the distances from some distinct features of the template more precisely, and ignore minor discrepancies originated from noise and imprecise measurement while obtaining the data.

We presume that the behavioral identifiers, such as typing pattern, voice and handwriting styles will be less susceptible to improvement using the proposed weighted distance methodology than the physiological identifiers.

Page 11: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Pattern Matching Aside from a problem of measuring the

distance, pattern matching between the template and the measured biometric characteristic is a very serious problem on its own.

Some preliminary research, mainly in the area of image processing, should be utilized in order to approach the problem from the right angle.

Page 12: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Template comparison The most common methods are based on

bit-map comparison techniques, scaling, rotating and modifying image to fit the template through the use of linear operators, and extracting template boundaries or skeleton (also called medial axis) for the comparison purposes.

In addition, template comparison methods also differ, being based on either pixel to pixel, important features (such as minutae) positions, or boundary/skeleton comparison.

Page 13: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Template Matching approach to Symbol Recognition

Compare an image with each template and see which one gives the best mach (courtesy of Prof. Jim Parker, U of C)

Page 14: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Good Match

Image

Template

Most of the pixels overlap means a good match (courtesy of Prof. Jim Parker, U of C)

Page 15: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Distance transform Definition 1. Given an n x m binary image I of white

and black pixels, the distance transform of I is a map that assigns to each pixel the distance to the nearest black pixel (a feature).

The distance transform method introduced in [Gavrilova and Alsuwayel] is based on fast scans of image in the top-bottom and left-right directions using a fast polygonal chain maintenance algorithm.

After the distance transform is build, it can be used to visualize proximity information in a form of temperature map.

As the distance from the black pixels (features) increases, the color intensity changes.

Page 16: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Distance TransformGiven an n x m binary image I of white and black pixels,

the distance transform of I is a map that assigns to each pixel the distance to the nearest black pixel (a feature).

Page 17: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Thermogram vs. distance transform

Thermogram of an ear (Brent Griffith, Infrared Thermography Laboratory, Lawrence Berkeley National Laboratory )

Page 18: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

What is a Distance Transform?

Given an n x m binary image I of white and black pixels, the distance transform of I is a map that assigns to each pixel the distance to the nearest black pixel (a feature).

Page 19: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

What is a Feature Transform?

The feature transform of I is a map that assigns to each pixel the feature that is nearest to it.

Page 20: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

L1 Distance Transform Algorithm

Page 21: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

L Distance Transform Algorithm

Page 22: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

A Fast Algorithm for Computing Euclidean Distance Transform

Works in Euclidean Metric Optimal – linear in the number of pixels Proceed in two passes over the image,

top down and bottom up For each row

Maintain a polygonal chain - a set of pixels in which the nearest feature may lies

Updates the chain for next row by pruning - it becomes the minimal set of pixels

Prune Endpoints and Internal Vertices

Page 23: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

What is a Chain? One Chain for the row Contains at most one pixel per column Contains the lowest pixel in the column After pruning, it contains only those

points that will be nearest features to some points in the row

Dynamically updated from row to row

Page 24: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Example of a a Chain

Page 25: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Pruning Endpoints

Identifying superfluous endpoints

Page 26: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Pruning Internal Points

Point q is removed

Page 27: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Point q remains

Pruning Internal Points

Page 28: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Algorithm Walkthrough

Page 29: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

0

500

1000

1500

2000

2500

3000

3500

4000

0 100000 200000 300000

Algm2 5%Algm1 5%Algm2 30%Algm1 30%

Experimental results

Algm 1 – pruning

Algm 2 – no pruning

Graph shows running time in sec. (OY axis) vs. number of pixels in image (OX axis)

Results:

Significant improvement in running time

Linear function grows slowly

Page 30: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

0

50

100

150

200

250

300

350

400

0 200000 400000 600000 800000 1000000

5%15%30%

Algm 1 with pruning was tested

Saturation levels: 5%, 15%, 30%

Results:

Linear Running Time, Regardless of Saturation (% of black pixels in image)

Experimental results

Page 31: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Experimental results

Page 32: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Generalized Voronoi diagram

A generalized Voronoi diagram for a set of objects in the space is

the set of generalized Voronoi regions according to some proximity rule.

A generalized Delaunay triangulation is the dual of the generalized Voronoi diagram obtained by joining all pairs of sites whose Voronoi regions share a common Voronoi edge.

Page 33: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Example: VD and DT in power metric

Page 34: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Voronoi methods in biometrics The methodology is making its way to the core

methods of biometrics, such as fingerprint identification, iris and retina matching, face analysis, ear geometry and others (see recent works by [Xiao, Zhang, Burge].

The methods are using Voronoi diagram to partition the area of a studies image and compute some important features (such as areas of Voronoi region, boundary simplification etc.) and compare with similarly obtained characteristics of other biometric data.

Page 35: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Medial axis transform

Definition 2. The medial axis, or skeleton of the set D, denoted M(D), is defined as the locus of points inside D which lie at the centers of all closed discs (or spheres) which are maximal in D, together with the limit points of this locus.

Page 36: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Medial axis transform

Page 37: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Singular-point detection In mane biometric problems, such as detecting singular

points in fingerprint images, the quality of the result and false detection rates depend directly on the quality of the data (image, print, recording etc).

To improve the result, pre-processing can be used. In some cases, it is not enough to simply enhance the image properties.

Many cases of false detection happen at the boundary of an image or at place where lines are of irregular shape.

A method based on extending the lines of the image beyond the boundary in the projected direction so that the singular point can be computed more precisely. For the second case, topology-based method are traditionally used to smooth the irregularity (including the interpolation techniques) [Maltony, Jain, Zhan]

Page 38: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Singular point detection

Singular point detection (top to bottom): singular point close to boundary (lower); regular pattern.

Page 39: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

(a) Thinned Image (b) Minutia Extracted

DT for minutiae point extraction

Page 40: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

DT for minutiae point extraction

(a) Purified minutia (b) DT constructed based (a)

Page 41: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

DT for matchingDT for matching

Delaunay Triangulation can be used for MatchingDelaunay Triangulation can be used for Matching For each Delaunay triangle, the length of three edges, the For each Delaunay triangle, the length of three edges, the three angles and the ridge numbers between each edge are three angles and the ridge numbers between each edge are recorded to construct a 9 dimensional local vector to find recorded to construct a 9 dimensional local vector to find the best-matched local structure in two fingerprints.the best-matched local structure in two fingerprints.

Page 42: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Triangle edge comparison in minutiae matching

θ2

B

θ1

A

θ’ 2

B’

θ' 1

A’

Page 43: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Geometry in facial synthesis

Face recognition, as well as facial emotion simulation and face morphing, often rely on Geometric relations among facial features (symmetry, size/positions, wrinkle locations, etc).

Page 44: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Image MorphingTwo steps:1) Establish feature correspondences: manually2) Mapping function: define spatial relationship

between all points in both images

+ =

Examples from the “facial attractiveness” project: www.beautycheck.de

500 corresponding points

Page 45: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Geometric areas and topology for facial expression synthesis

Page 46: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Portrait Generator: edge detection for wrinkles

Page 47: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Starting Frame Ending Frame

Page 48: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

PhotoFit of FaceGen

Page 49: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Topology-based solution to generating biometric information Finally, one of the most challenging areas is a recently

emerged problem of generating biometric information, or so-called inverse problem in biometrics.

In order to verify the validity of algorithms being developed, and to ensure that the methods work efficiently and with low error rates in real-life applications, a number of biometric data can be artificially created, resembling samples taken from live subjects.

In order to perform this procedure, a variety of methods should be used, but the idea that we explore is based on the extraction of important topological information from the relatively small set of samples (such as boundary, skeleton, important features etc), applying variety of computational geometry methods, and then using these geometric samples to generate the adequate set of test data.

Page 50: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Courtesy of: Michal Dobes and Libor Machala, Iris Database, http://www.inf.upol.cz/iris/

Iris Synthesis: Original Set

Page 51: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Combinations

Page 52: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Output Irises

Courtesy of: Michal Dobes and Libor Machala, Iris Database, http://www.inf.upol.cz/iris/

Page 53: CPSC 601 Geometric Algorithms in Biometrics Dr. Marina L. Gavrilova.

Conclusions Geometric data structures and

methodology based on proximity and topology prove to be useful for emerging field of biometric technologies.

The overview discussed existing computational geometry methods and their recently developed applications in biometrics

We suggest a number of new approaches for investigation of specific biometric problems, including those of synthesis of biometric information.


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