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R EVISED ABSTRACT Background The dissemination of broad-spectrum ß-lactamases (ESBLs) such as CTX-Ms among Enterobacteriaceae is a matter of great concern given the major role of these pathogens as causes of nosocomial infections and of community-acquired infections. Detection of those multidrug resistant clones is primarily based on indirect detection of antimicrobial resistances. The strategies involve fast identification of the resistance mechanisms, followed by strict hygiene and contact precautions of the patients. Here, we evaluate a Lateral Flow ImmunoAssay (LFIA) to detect CTX-Ms producers from agar plates, urine or blood cultures. Results are interpretable within 15 minutes. Methods A manufactured LFIA for detection of group 1 (G1) CTX-Ms (CTX-Ms G1 LFIA) has been validated with 175 enterobacterial isolates with PCR characterized ß-lactamase content. A colony from agar culture was suspended in extraction buffer (lysis step) and added to the device. Prospectively, 100 clinical isolates with decreased susceptibility to broad spectrum cephalosporinases were also tested. In order to evaluate the CTX-Ms G1 LFIA direct use in urine and blood cultures, both types of samples were spiked with CTX-Ms producing or non- producing strains. Before testing, extraction buffer was added to those samples. In each case, the result was eye read 15 minutes after the sample deposition. A homemade CTX-Ms G1-2-9 was also evaluated in the same conditions. Results CTX-Ms G1 LFIA is able to detect the variants CTX-M-1-3- 15-55-82-101 and-182. During validation, no false positive or false negative were observed considering the CTX-Ms G1 detection. Concerning the spiking in urine and blood culture, a positive result was observed only when a CTX-M G1 was expressed. The homemade CTX-Ms G1-2-9 LFIA showed similar performances with an extended specificity to G2 and G9 CTX-Ms In this evaluation no matrix effects were observed. Conclusions Our CTX-Ms G1 LFIA showed 100% sensibility and specificity on agar media grown strains with a limit of detection closed to 10 6 cfu/ml. Its performances are similar in urine and blood culture. The homemade CTX-Ms G1-2-9 LFIA targets enzymes from 4 CTX-M groups and could provide the detection of 99% CTX-M expressing strains worldwide. The promising results will allow us to start an evaluation study with clinical samples from hospitalized patients. CTX - M - 15 D ETECTION IN C LINICAL S AMPLES : E VALUATION OF AN I MMUNO C HROMATOGRAPHIC T EST Saturday - 428 Hervé Boutal 1 , Anaïs Vogel 1 , Sandrine Bernabeu 2 , Karine Devilliers 1 , Marc Plaisance 1 , Quentin Baratte 1 , Saoussen Oueslati 2 , Thierry Naas 2,3 , Stéphanie Simon 1 , Hervé Volland 1 1 Service de Pharmacologie et Immuno-analyse (SPI), JOLIOT, CEA, INRA, Université Paris-Saclay, F-91191, Gif sur Yvette, FRANCE 2 EA7361, UPSUD, Hôpital de Bicêtre, APHP. Le Kremlin Bicêtre France 3- Associated French National Reference Centre for antibiotic resistance. Le Kremlin Bicêtre, France Contact: [email protected] Phone: +33 1 69 08 64 73 R ETROSPECTIVE EVALUATION 175 strains with PCR characterized ß-lactamase content (from the french National Reference Center (NRC) for antibiotic resistance) 70 CTX-Ms group 1 producers gave positive results 105 non CTX-Ms G1 producers gave negative results R OUTINE USE 100 isolates (from urine, blood culture, bile…) 82% CTX-Ms Group 1 gave positive results 16% CTX-Ms Group 2 and 9 gave negative results 2% Other ESBLs gave negative results 100% sensititvity and specificity for CTX - Ms G1 LFIA Variants detected : CTX - M 1/3/15/32/37/55/57/71/101/182 L IMIT OF DETECTION (LOD) IN URINE AND BLOOD CULTURE Recombinant CTX-M-15 was serially diluted either in 1X extraction buffer, negative urine or blood culture and each dilution treated as detailed above (lysis step and migration) CTX-Ms G1 LFIA validation: manufactured tests from NG Biotech CTX-Ms G1 LFIA evaluation in urine and blood culture P ROTOCOLE RESULTS ILLUSTRATION L IMIT OF DETECTION IN URINE AND BLOOD CULTURE With CTX-Ms G1 expressing strains E. coli expressing CTX-M-1 E. coli expressing CTX-M-15 K. pneum. expressing CTX-M-15 CTX-Ms G1 non-expressing E. coli, K. pneum. and P. mirabilis were also tested LOD in urine ( 3 H culture ) E. coli CTX-M-1 8.10 5 cfu/ml E. coli CTX-M-15 1.10 6 cfu/ml K. pneum. CTX-M-15 2.10 6 cfu/ml LOD in « blood » ( 1 H culture ) E. coli CTX-M-15 4.10 6 cfu/ml K. pneum. CTX-M-15 2.10 6 cfu/ml Urine and blood cultures did not influence the background on the membrane Non - expressing strains gave negative results in both sample types T he CTX - Ms G 1 LFIA could also detect CTX - M - 32 - 37 - 57 ( E . coli ) and CTX - M - 71 ( P . mirabilis ) expressing strains in urine and blood culture (data not shown ) Homemade CTX-Ms G1-2-9 LFIA Antibodies recognizing labelled antibodies (control line) Absorption pad Sample Antibody pairs recognizing the G1 G2 and G9 CTX-Ms. One antibody of the pair labelled with colloidal gold, the other immobilized on nitrocellulose (test lines) Sample pad Nitrocellulose Structure of the strip Immunological detection Sample flow : capillarity Result profiles One colony from agar plate was suspended in 150μl of extraction buffer (lysis step). After vortexing 100μl were loaded on the cassette. Migration 15’ before naked eye reading Species variability: E. coli, K. pneumoniae, K. ozoenae, E. asburiae, P. mirabilis, E. aerogenes, M. morganii, C. koseri, P. stuartii, P. rettgeri, S. enterica, E. cloacae, C. freundii, S. marscesens M ONOCLONAL ANTIBODIES ( m A BS ) , PRODUCTION AND SELECTION Mice were immunized with purified recombinant CTX-M-15 (group 1), CTX-M-2 (group 2) or CTX-M-14 (group 9) 20 mAbs were selected and purified per enzyme One pair selected per enzyme I MMUNOCHROMATOGRAPHIC ASSAY PRINCIPLE mAbs from groupe 9 immunized mice mAbs from groupe 2 immunized mice mAbs from groupe 1 immunized mice Evaluation of the CTX-Ms G1-2-9 LFIA in urine and blood culture P ROTOCOLE Culture, dilution, lysis step were performed as previously described For the migration, 100μl of each dilution were added to 10μl of gold-labelled mAbs (mix of the 3 labeled mAbs) in a microtitration plate well. Then the strips were dropped into the well and results eye read after 30’ Upright migration R ESULTS AFTER CULTURE IN URINE AND BLOOD CULTURE CTX-Ms expressing strains were grown as previously described 1 – No bacteria 2– E. coli CTX-M-1 (G1) 3– E. coli CTX-M-15 (G1) 4– K. pneu. CTX-M-15 (G1) 5– E. coli CTX-M-2 (G2) 6– E. coli CTX-M-8 (G8) 7– K. oxytoca CTX-M-14 (G9) 8– E. coli CTX-M-27 (G9) One hour blood culture All strains detected with result profiles correponding to the CTX-M group Results after culture in urine (3H) were very similar (not shown) CTX-M non-expressing strains (E. coli, K. pneum., P. mirabilis, C. freundii) gave negative results (not shown) This homemade CTX - Ms G 1 - 2 - 9 LFIA also recognized CTX - M - 8 (G 8 ) LODs for CTX - Ms G 1 were similar whatever the test format ( manufactured or homemade ) LODs for CTX - Ms G 2 - 8 - 9 were between 1 . 10 6 and 1 . 10 7 cfu /ml Conclusions and perspectives The CTX-Ms G1 LFIA will soon be commercially available Its validation for direct detection in urine and blood culture is still in progress The CTX-Ms G1-2-8-9 LFIA will soon be validated with the NRC collection and will follow the commercialization process Those two LFIAs could directly be used with samples such as urine and blood culture using the described protocol Four CTX - M groups out of five could be detected including : CTX - M - 1 - 15 - 32 - 37 - 55 - 57 - 71 - 101 - 182 (group 1), CTX - M - 2 (group 2), CTX - M - 8 (group 8) and CTX - M - 14 - 18 - 19 - 27 (group 9) Results have to be confirmed with significant number of clinical samples: blood cultures just after they flagged positive in several commercial media urine from patients and not only spiked urine from healthy donor swabs should also be tested
Transcript
Page 1: CTX-M-15 DETECTION IN CLINICAL SAMPLES Saturday …ngbiotech.com/wp-content/uploads/2017/06/ASM-Poster-MDR-AMR-… · Conclusions Our CTX-Ms G1 LFIA showed 100% sensibility and specificity

REVISED ABSTRACT

Background The dissemination of broad-spectrum ß-lactamases(ESBLs) such as CTX-Ms among Enterobacteriaceae is a matter ofgreat concern given the major role of these pathogens as causesof nosocomial infections and of community-acquired infections.Detection of those multidrug resistant clones is primarily basedon indirect detection of antimicrobial resistances. The strategiesinvolve fast identification of the resistance mechanisms,followed by strict hygiene and contact precautions of thepatients. Here, we evaluate a Lateral Flow ImmunoAssay (LFIA)to detect CTX-Ms producers from agar plates, urine or bloodcultures. Results are interpretable within 15 minutes.

Methods A manufactured LFIA for detection of group 1 (G1)CTX-Ms (CTX-Ms G1 LFIA) has been validated with 175enterobacterial isolates with PCR characterized ß-lactamasecontent. A colony from agar culture was suspended in extractionbuffer (lysis step) and added to the device. Prospectively, 100clinical isolates with decreased susceptibility to broad spectrumcephalosporinases were also tested. In order to evaluate theCTX-Ms G1 LFIA direct use in urine and blood cultures, bothtypes of samples were spiked with CTX-Ms producing or non-producing strains. Before testing, extraction buffer was added tothose samples. In each case, the result was eye read 15 minutesafter the sample deposition. A homemade CTX-Ms G1-2-9 wasalso evaluated in the same conditions.

Results CTX-Ms G1 LFIA is able to detect the variants CTX-M-1-3-15-55-82-101 and-182. During validation, no false positive orfalse negative were observed considering the CTX-Ms G1detection. Concerning the spiking in urine and blood culture, apositive result was observed only when a CTX-M G1 wasexpressed. The homemade CTX-Ms G1-2-9 LFIA showed similarperformances with an extended specificity to G2 and G9 CTX-MsIn this evaluation no matrix effects were observed.

Conclusions Our CTX-Ms G1 LFIA showed 100% sensibility andspecificity on agar media grown strains with a limit of detectionclosed to 106 cfu/ml. Its performances are similar in urine andblood culture. The homemade CTX-Ms G1-2-9 LFIA targetsenzymes from 4 CTX-M groups and could provide the detectionof 99% CTX-M expressing strains worldwide. The promisingresults will allow us to start an evaluation study with clinicalsamples from hospitalized patients.

CTX-M-15 DETECTION IN CLINICAL SAMPLES:EVALUATION OF AN IMMUNOCHROMATOGRAPHIC TEST

Saturday- 428 Hervé Boutal1, Anaïs Vogel1, Sandrine Bernabeu2, Karine Devilliers1, Marc Plaisance1, Quentin Baratte1, Saoussen Oueslati2, Thierry Naas2,3, Stéphanie Simon1, Hervé Volland1

1 Service de Pharmacologie et Immuno-analyse (SPI), JOLIOT, CEA, INRA, Université Paris-Saclay, F-91191, Gif sur Yvette, FRANCE2 EA7361, UPSUD, Hôpital de Bicêtre, APHP. Le Kremlin Bicêtre France3- Associated French National Reference Centre for antibiotic resistance. Le Kremlin Bicêtre, France

Contact: [email protected]: +33 1 69 08 64 73

RETROSPECTIVE EVALUATION

175 strains with PCR characterized ß-lactamase content (from the french National Reference Center (NRC) for antibiotic resistance) 70 CTX-Ms group 1 producers gave positive results 105 non CTX-Ms G1 producers gave negative results

ROUTINE USE

100 isolates (from urine, blood culture, bile…) 82% CTX-Ms Group 1 gave positive results 16% CTX-Ms Group 2 and 9 gave negative results 2% Other ESBLs gave negative results

100% sensititvity and specificity for CTX-Ms G1 LFIA Variants detected: CTX-M 1/3/15/32/37/55/57/71/101/182

LIMIT OF DETECTION (LOD) IN URINE AND BLOOD CULTURE

Recombinant CTX-M-15 was serially diluted either in 1Xextraction buffer, negative urine or blood culture and eachdilution treated as detailed above (lysis step and migration)

CTX-Ms G1 LFIA validation: manufactured tests from NG Biotech

CTX-Ms G1 LFIA evaluation in urine and blood culture

PROTOCOLE

RESULTS ILLUSTRATION

LIMIT OF DETECTION IN URINE AND BLOOD CULTURE

With CTX-Ms G1 expressing strains E. coli expressing CTX-M-1 E. coli expressing CTX-M-15 K. pneum. expressing CTX-M-15

CTX-Ms G1 non-expressing E. coli, K. pneum. and P.mirabilis were also tested

LOD in urine (3H culture) E. coli CTX-M-1 ≈ 8.105 cfu/ml

E. coli CTX-M-15 ≈ 1.106 cfu/ml

K. pneum. CTX-M-15 ≈ 2.106 cfu/ml

LOD in « blood » (1H culture) E. coli CTX-M-15 ≈ 4.106 cfu/ml

K. pneum. CTX-M-15 ≈ 2.106 cfu/ml

Urine and blood cultures did not influence the background on themembrane

Non-expressing strains gave negative results in both sample types

The CTX-Ms G1 LFIA could also detect CTX-M-32-37-57 (E. coli) andCTX-M-71 (P. mirabilis) expressing strains in urine andblood culture (data not shown)

Homemade CTX-Ms G1-2-9 LFIA

Antibodiesrecognizing labelledantibodies (control line)

Absorption pad

Sample

Antibody pairs recognizing theG1 G2 and G9 CTX-Ms. Oneantibody of the pair labelledwith colloidal gold, the otherimmobilized on nitrocellulose(test lines)

Sample pad Nitrocellulose

Structure of the strip Immunological detection

Sample flow : capillarity

Result profiles

One colony from agar plate was suspended in 150µl of extraction buffer (lysis step). After vortexing 100µl were loaded on the cassette. Migration 15’ before naked eye reading

Species variability: E. coli, K. pneumoniae, K. ozoenae, E. asburiae, P. mirabilis, E. aerogenes, M. morganii, C. koseri, P. stuartii, P. rettgeri, S. enterica, E. cloacae, C. freundii, S. marscesens

MONOCLONAL ANTIBODIES (mABS) , PRODUCTION AND SELECTION

Mice were immunized with purified recombinant CTX-M-15 (group 1), CTX-M-2 (group 2) or CTX-M-14 (group 9)20 mAbs were selected and purified per enzymeOne pair selected per enzyme

IMMUNOCHROMATOGRAPHIC ASSAY PRINCIPLE

mAbs from groupe 9 immunized mice

mAbs from groupe 2 immunized mice

mAbs from groupe 1 immunized mice

Evaluation of the CTX-Ms G1-2-9 LFIA in urine and blood culture

PROTOCOLE

Culture, dilution, lysis step were performed as previously describedFor the migration, 100µl of each dilution were added to 10µl of gold-labelled mAbs (mix of the 3 labeledmAbs) in a microtitration plate well. Then the strips were dropped into the well and results eye read after 30’

Up

right

migratio

n

RESULTS AFTER CULTURE IN URINE AND BLOOD CULTURE

CTX-Ms expressing strains were grown as previously described

1 – No bacteria2 – E. coli CTX-M-1 (G1)3 – E. coli CTX-M-15 (G1)4 – K. pneu. CTX-M-15 (G1)

5 – E. coli CTX-M-2 (G2)6 – E. coli CTX-M-8 (G8)7 – K. oxytoca CTX-M-14 (G9)8 – E. coli CTX-M-27 (G9)

One hour blood culture All strains detected with result profiles correponding to the CTX-M group Results after culture in urine (3H) were very similar (not shown) CTX-M non-expressing strains (E. coli, K. pneum., P. mirabilis, C. freundii) gave negative

results (not shown) This homemade CTX-Ms G1-2-9 LFIA also recognized CTX-M-8 (G8) LODs for CTX-Ms G1 were similar whatever the test format (manufactured or homemade) LODs for CTX-Ms G2-8-9 were between 1.106 and 1.107 cfu/ml

Conclusions and perspectives

The CTX-Ms G1 LFIA will soon be commercially available Its validation for direct detection in urine and blood culture is still in progress The CTX-Ms G1-2-8-9 LFIA will soon be validated with the NRC collection and will follow the commercialization process Those two LFIAs could directly be used with samples such as urine and blood culture using the described protocol Four CTX-M groups out of five could be detected including:

CTX-M-1-15-32-37-55-57-71-101-182 (group 1), CTX-M-2 (group 2), CTX-M-8 (group 8) and CTX-M-14-18-19-27 (group 9)

Results have to be confirmed with significant number of clinical samples: blood cultures just after they flagged positive in several commercial media urine from patients and not only spiked urine from healthy donor swabs should also be tested

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