NAMD, CUDA, and Clusters: Taking GPU Molecular Dynamics ... · NAMD: Scalable Molecular Dynamics 40,000 Users, 1700 Citations Blue Waters Target Application 2002 Gordon Bell Award
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Scalability and interoperable libraries in NAMD
The Charm++ Programming Model and NAMD
NAMD Algorithms and HPC Functionality
qmflows-namd Documentation
Biomolecular modeling using NAMD on TeraGrid …charm.cs.illinois.edu/newPapers/10-31/talk.pdfBiomolecular modeling using NAMD on TeraGrid machines ... 14 [1] Castelmur et al., PNAS,
COLLECTIVE VARIABLES MODULE Reference manual for NAMD · COLLECTIVE VARIABLES MODULE Reference manual for NAMD Code version: 2020-05-07 Alejandro Bernardin, Haochuan Chen, Jeffrey
NAMD Fall Conference: Leadership in Times of Changemedicaiddirectors.org/wp-content/uploads/2015/11/navigating_choppy... · NAMD Fall Conference: Leadership in Times of ... » Damn
Experience with NAMD on GPU-Accelerated ClustersNIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute, UIUC Experience with NAMD on GPU-Accelerated Clusters
Application of free-energy methods in NAMD to complex ...cermics.enpc.fr/~lelievre/CECAM/J_Gumbart.pdf · Application of free-energy methods in NAMD to complex biological systems
Demonstration: Using NAMD
NAMD User’s Guide - University Of Illinois · The NAMD User’s Guide describes how to run and use ... NAMD Version Git-2018-03-21 Authors: R ... 5.2.6 Full direct parameters ...
Temperature (5.6-300K) Dependence Comparison of Carrier ...
$300k @ 26 (Book Excerpt) Jones-300k... · $300k @ 26 (Book Excerpt) By Josh Jones. Foreword by Ben Gay III. 20660 Stevens Creek Blvd., Suite 210 Cupertino, CA 95014
Scalable Molecular Dynamics with NAMD - UNT …/67531/metadc866153/...Scalable Molecular Dynamics with NAMD 67 4.4.1 Force Calculations Molecular dynamics simulations involve calculating
Scaling Challenges in NAMD: Past and Future
NAMD: Biomolecular Simulation on Thousands of Processors
Short-range (Non- bonded) Interactions in NAMD