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Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph....

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Drosophila – 2 lectures (½ – 1- ½ ) • Cleavage • View -gastrulation, organogen. frame metamorph. • Once we know the embryo, meet the molecules • Because this is a largely ‘solved’ system • Because these genes have key roles in all metazoans • EVERY one of 5000 cleavage state cell has a D/V and A/P ‘molecular address’, and is therefore specified .
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Page 1: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Drosophila – 2 lectures (½ – 1- ½ )

• Cleavage

• View -gastrulation, organogen. frame metamorph.

• Once we know the embryo, meet the molecules• Because this is a largely ‘solved’ system

• Because these genes have key roles in all metazoans

• EVERY one of 5000 cleavage state cell has a D/V and A/P ‘molecular address’, and is therefore specified.

Page 2: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Both axes definedin Drosophila

First to Anterior-Posterior Axis (A-P)

Page 3: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 4: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 5: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 6: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 7: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 8: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 9: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 10: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 11: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 12: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Bicoid mRNA 1. Bicoid RNA ‘caught’ at the ‘entrance’

2. Unanchored Bicoid RNA returned to the anterior side by dynein on MTs

Page 13: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Show:Bcd-gastrulation

Gastrulation-dorsal

Page 14: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 15: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

In syncitium

For control of Hunchback protein – Bicoid is a transcription factor, but Nanos . . .

Page 16: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Nanos is an RNA binding protein that PREVENTS Hunchback Translation

Page 17: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gap genes are turned on in broad stripes by maternal genes, each other. ALL TFs.

Hunchback

Gt

Kr

kn

hb (later)

Page 18: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gt

Kr

kn

hb (later)

Page 19: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gap genes are turned on in broad stripes by maternal genes, each other

Pair rule genes are turned on in 7 stripes each, harder to conceptualize

Page 20: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Each stripe of theP-R gene has its Own enhancer.

Even-skippedgene – 7 stripes.

Page 21: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Each stripe has its own enhancer, responding to a different combinatorial of Gap and Maternal proteins

Page 22: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 23: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gap genes are turned on in broad stripes by maternal genes, each other

Pair rule genes are all Trascription Factors too – turn on Segment Polarity gene expression

Page 24: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 25: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 26: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 27: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

hh hh hh hh Two morphogens/ligands/organizers in adjacent cells

Page 28: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 29: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 30: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 31: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 32: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

No

Active

Page 33: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

The embryoNow has twoAdjacent organizersWhich release a

Morphogen

From syncitium withGradient of 1 (or 2)Morphogens, to seriesOf segments, each

With 2 morphogens

Page 34: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 35: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 36: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Both axes definedin Drosophila,

every cell of 5000.Now to D/V

Page 37: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 38: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 39: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 40: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Figure 23.14 Homologous Pathways Specifying Neural Ectoderm in Protostomes (Drosophila) and Deuterostomes (Xenopus) D/V

Page 41: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 42: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gastrulation - Drosophila

http://www.flybase.org/data/images/Animation/

AND Course Site (Movies)

Page 43: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 44: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

I. RTK pathway Sets follicle cell D/V state

II. Proteolytic cascade Sets embryos’ cell D/V state

III. Toll/Cactus/Doral Sets nuclear D/V state

IV. Dorsal TF thresholds Diff. pathway per D/V address

4 STAGES OF ESTABLISHING DORSAL/VENTRAL – 4 SEQUENTIAL PATHWAYS +

STAGE PATHWAY PATHWAY OUTCOME

Page 45: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

I. RTK pathway Sets follicle cell D/V state

II. Proteolytic cascade Sets embryos’ cell D/V state

III. Toll/Cactus/Doral Sets nuclear D/V state

IV. Dorsal TF thresholds Diff. pathway per D/V address

4 STAGES OF ESTABLISHING DORSAL/VENTRAL – 4 SEQUENTIAL PATHWAYS +

STAGE PATHWAY PATHWAY OUTCOME

Page 46: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Dorsal fate determined in oocyte, through signaling between oocyte and somatic follicle cells

Page 47: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gurken protein on future dorsal side of oocyte, facing cells which become dorsal

Page 48: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 49: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Human blood clotting cascade– Also a series of

(extracellular )proteolytic cleavages

Page 50: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 51: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 52: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Dorsalized Ventralized

Ventral fates dictated by NUCLEAR presence of the protein Dorsal

Page 53: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Gradient of Nuclear Dorsal protein imparts D-V IDs to cells

Page 54: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Twist Protein specifies mesoderm

Page 55: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Lateral inhibition in neurectoderm to specify neruogenesis: Notch mediated

All Rhomboid expressing cells express Notch, then undergo a stochastic process for ¼ cells to become neuronal

Page 56: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Lateral inhibition in neurectoderm to specify neruogenesis: Notch mediated

Page 57: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 58: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Key factor for Dorsal identities inDrosophila

Key factor for D-V identities inVertebrates

TGF-Beta family

Page 59: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 60: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Figure 23.14 Homologous Pathways Specifying Neural Ectoderm in Protostomes (Drosophila) and Deuterostomes (Xenopus) D/V

Page 61: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 62: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 63: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 64: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 65: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

All animals have related developmental histories

Page 66: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 67: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 68: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 69: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

out inevert

Page 70: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 71: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 72: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 73: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Figure 6.16 Scanning Electron Micrograph of a Compound Eye in Drosophila

Eye disc patterning controlled by ‘reuse’ of the pathways seen in general axis specification

Page 74: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Figure 6.17 Differentiation of Photoreceptors in the Drosophila Compound Eye

Page 75: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

Figure 6.18 Major Genes Known to be Involved in the Induction of Drosophila Photoreceptors

Page 76: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.
Page 77: Drosophila – 2 lectures (½ – 1- ½ ) Cleavage View -gastrulation, organogen. frame metamorph. Once we know the embryo, meet the molecules Because this is.

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