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Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos Luce, Amboise generalized entropy model Osamu Komori Atsumi Ohara
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Page 1: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Duality in a maximum

Shinto Eguchi

MaxEnt, 201421-26 September 2014Chateau Clos Luce, Amboise

generalized entropy model

Osamu KomoriAtsumi Ohara

Page 2: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

MaxEnt in ecology

Presence data obtained by an ecological study

Log-entropy (Boltzmann-Gibbs-Shannon)

Equal mean space

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Page 3: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Maximum entropy distribution

Problem : find a distribution f to maximize H( f under the constraints:

Solution is Gibbs distribution

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Page 4: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

MAP estimator

Loss function

Cf. adaptive Lasso, Zou (2006, JASA)

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Sequential L1-regularization (Phillip, Anderson, Schapire 2006)

GIS (Geographic Information System)

GBIF (Global Biodiversity Inventory Facility) in R

Page 5: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

5http://www.seascapemodeling.org/

Habitat map of right whales

Page 6: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Area Under ROC Curve

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Page 7: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Problems in MaxEnt

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The duality between the model and estimation is not robust(model misspecification, over-fitting to data, cf. Bayes robust)

MaxEnt jointly suggests the statistical model and estimation,(exponential model and maximum likelihood)

MaxEnt is useful in presence-only-data in ecological studies

U-entropy leads to extension from MaxEnt to MaxU-Ent(The duality is extended in functional degree of freedom)

Model selection and model validation have simple forms

Page 8: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Hill’s diversity numbers(effective number of species) (1973)

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richness Rare species are highly weighted

exp (log-entropy) All species are fairly weighted

Simpson index Dominant species are highly weighted

Page 9: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Several measures of entropy

Tsallis entropy (1988)

Hill’s diversity (1973)

Simpson (1949)

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U-entropy (Eguchi, 2006)

Page 10: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Generalized entropy

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Generator

U-entropy

Example

Convex conjugate

log entropy

Renyi-Tsallis entropy

Page 11: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Generalized divergence

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U-cross entropy

U-divergence

Page 12: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

MaxU-Ent

Problem : find a distribution f to maximize HU ( f under the constraints:

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Page 13: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

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Minimum divergence geometry

Riemannian metric

Linear connections

Page 14: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

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Dually flat

Riemann metric

Linear connections

Conjugate convexity:

U-model

Page 15: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

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Pythagorean theorem for U-divergence

Theorem

m-geodesicU-geodesic

Page 16: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Max-Entropy model

MaxEnt and MinDiv

Page 17: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Duality of totally geodesic

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Page 18: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

MaxU-Ent= MaxU-model + MinU-divergence

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Page 19: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Project

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Which -MaxEnt is the best ?

Can we select the best based on presence data?

Test AUC comparison may suggest better Max -Ent.

Hill’s diversity numbers associate with

one parameter family of MaxEnt methods, { Max -Ent : in R }

Can the family improve the classical Maxent?

Page 20: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Folivora( Three-toed sloth )

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Page 21: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Max-Ent

21MaxEnt)

Page 22: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

22MaxEnt)

Max-Ent

Page 23: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

U-MaxEnt

U-entropy

U-Gibbs distribution

U-estimator

U-divergence

U-MaxEnt

U-entropy

U-Gibbs distribution

U-estimator

U-divergence

A class of MaxU-Ent

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MaxEnt

Log-entropy

Gibbs distribution

KL-divergence

MLE

U-MaxEnt

U-entropy

U-Gibbs distribution

U-estimator

U-divergence

MaxU-Ent

U-entropy

U-Gibbs distribution

U-divergence

MinU-estimator

Page 24: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Thank you!

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Page 25: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Model validation

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A brief tutorial on Maxent(Phillips, 2006)

Page 26: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

model

loss function

U-loss

exp-model U-model

( U-estimator , U-model)

- log-likelihoodMLE

Robust estimator

Robust model

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U-estimate

Page 27: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

MaxU-Ent

Problem : find a distribution f to maximize HU ( f under the constraints:

27

Page 28: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Related problems

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Maxent is equivalent to Poisson point process model

( Renner-Warton, 2013, Loyle et all. 2012,

Aarts et al. 2012, Fithian-Hastie, 2012)

-Maxent is equivalent to -Poisson point process model?

Page 29: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

-Poisson distribution

5 10 15 20

0.05

0.10

0.15

0.20

0.25

0.30

0.35

5 10 15 20

0.05

0.10

0.15

0.20

0.25

0.30

0.35

5 10 15 20

0.05

0.10

0.15

0.20

0.25

0.30

0.35

5 10 15 20

0.05

0.10

0.15

0.20

0.25

0.30

0.35

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Page 30: Duality in a maximum generalized entropy modeldjafari.free.fr/MaxEnt2014/slides/42_slides.pdf · Duality in a maximum Shinto Eguchi MaxEnt, 2014 21-26 September 2014 Chateau Clos

Habitat map

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= 0 = 0.5


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