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EDSP webinar 2: In vitro assays for the EDSP

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This webinar discusses the in vitro studies required for the EPA’s Endocrine Disruptor Screening Program; we will take a closer look at each of studies, their challenges, their endpoints, their acceptance criteria and discuss our experience of the validation of the assays. We will also look at some ways in which you can ensure that your studies run smoothly and efficiently. We will close out by discussing the EDSP’s Data Evaluation Record (DER) and the Standard Evaluation Procedures (SEP). More info at http://www.huntingdon.com/Chemical/Endocrinedisruptorscreeningprogram/Webinars
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www.huntingdon.com Endocrine Disruptor Screening Program Webinar week 20-23 January 2014
Transcript
Page 1: EDSP webinar 2: In vitro assays for the EDSP

www.huntingdon.com

Endocrine Disruptor

Screening Program

Webinar week

20-23 January 2014

Page 2: EDSP webinar 2: In vitro assays for the EDSP

www.huntingdon.com

In vitro tests for endocrine

disruption

Leslie Akhurst MSc, BSc (Hons)

Head of In vitro Safety Assessment

Yen-Ling Cheung PhD, MSc

Scientific Manager, Metabolism

Page 3: EDSP webinar 2: In vitro assays for the EDSP

www.huntingdon.com

Leslie Akhurst & Yen-Ling Cheung

IN VITRO TESTS FOR

ENDOCRINE DISRUPTION

3

Page 4: EDSP webinar 2: In vitro assays for the EDSP

www.huntingdon.com

IN VITRO TESTS FOR ENDOCRINE

DISRUPTION

Leslie

ER transcriptional activation assay

Steroidogenesis assay

Yen

Aromatase

ER & AR binding assays

Leslie

Summary

4

Page 5: EDSP webinar 2: In vitro assays for the EDSP

www.huntingdon.com

EPA Tier 1 EDSP Tests

5

Assays

HPG HPT

E Anti-E A Anti-A T E

In vitro

ERα Transcriptional Activation X

ER Binding X X

AR Binding X X

Steroidogenesis X X

Aromatase X

In vivo

Uterotrophic X

Hershberger X X

Pubertal Male X X X X X

Pubertal Female X X X X X

Fish short tem reproduction X X X X X X X

Amphibian metamorphosis X

Modes of Action Covered by Assay

Receptor binding Steroidogenesis

Page 6: EDSP webinar 2: In vitro assays for the EDSP

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IN VITRO ED ASSAYS

Tier 1 in vitro assays are intended to provide

some mechanistic data for single known

pathways, whereas in vivo assays capture

multiple modes of action

6

Page 7: EDSP webinar 2: In vitro assays for the EDSP

www.huntingdon.com

ER Transcriptional Activation

Assay

OCSPP 890.1300 (Oct 2009)

OECD 455 (7 September 2009, revised 2 October 2012)

hERα-HeLa-9903 cell line

Expresses human estrogen receptor α

Contains firefly luciferase reporter gene

Validated by the Japanese Chemicals Evaluation and

Research Institute (CERI)

Assay designed to investigate agonist interactions, not

antagonist. Therefore ER binding assay is also needed

before concluding that the chemical does not bind to the

receptor

7

Page 8: EDSP webinar 2: In vitro assays for the EDSP

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ER Transcriptional Activation Assay

96 well plate assay

Expose cells to 8 conc of test/ref substance in triplicate. Test up to 1 mM

or solubility limit of test substance.

Cytotoxicity of test materials assessed using MTT/MTS. Wells with <80%

viability not included in data analysis

A reference chemical plate is run alongside each test to monitor stability of

cell line response

17β-estradiol (strong estrogen)

17α-estradiol (weak estrogen)

17α-methyltestosterone (very weak agonist)

Corticosterone (negative)

Ligand binds to hERα → activates reporter gene → luciferase expression

measured using luminometer

The test must be conducted on at least two occasions

8

Page 9: EDSP webinar 2: In vitro assays for the EDSP

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ER Transcriptional Activation Assay

Acceptability Criteria

EC50, PC50, PC10 and Hill slopes measured for each reference

chemical and should fall within the acceptability range

The mean luciferase activity of the PC should be ≥ 4-fold VC

The fold-induction corresponding to the PC10 of the PC should

be > 1±2 SD of the VC

Consistent responses must be observed on two assay

occasions

Solubility should not be exceeded and cytotoxicity should not

be ≤80% of VC

Test substance is positive if the maximum response (RPCmax)

≥ 10% of response of PC in two runs

9

Page 10: EDSP webinar 2: In vitro assays for the EDSP

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ER Transcriptional Activation Assay

Acceptance Criteria

10

Name logPC50 logPC10 logEC50 Hill slope Test range

17β-Estradiol (E2) -11.4 to -10.1 <-11 -11.3 to -10.1 0.7 to 1.5 10-14 to 10-8 M

17α-Estradiol -9.6 to -8.1 -10.7 to -9.3 -9.6 to -8.4 0.9 to 2.0 10-12 to 10-6 M

Corticosterone - - - - 10-10 to 10-4 M

17α-

Methyltestosterone -6.0 to -5.1 -8.0 to -6.2 - - 10-11 to 10-5 M

Page 11: EDSP webinar 2: In vitro assays for the EDSP

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OECD Validated Spreadsheet Lab name: Date: Worker name: Plate name: Performance standard

ID1 1.00E-05 M ID2 1.00E-04 M ID3 1.00E-06 M ID4 1.00E-08 M fold-induction (FI) 4.7 Pass

FI VC_Mean + 2SD 1.3

RawData 1 2 3 4 5 6 7 8 9 10 11 12 FI PC10 1.4

A 1312 1854 1308 315 326 389 2176 1925 2085 2397 1825 1974

B 654 665 551 327 252 213 2333 2166 2162 2113 2299 2078

C 515 606 467 400 336 261 2021 1908 1626 1933 1732 1807

D 523 462 498 364 273 242 841 988 802 659 1310 749

E 515 530 518 363 342 244 524 486 516 494 538 620

F 385 426 441 454 364 416 380 400 306 377 509 514

G 401 377 452 408 373 405 334 441 375 413 340 348

H 396 477 438 391 588 388 2280 1875 1835 1970 2311 2195

VC_mean→ 446.3 (PC (1 nM E2) + VC)_mean→ 2077.7

fold-induction→ 4.7

Raw - VC_mean→ 865.9 1407.5 862.0 -131.1 -120.5 -56.9 1729.2 1479.0 1639.2 1950.3 1378.3 1528.0

207.9 218.5 104.6 -119.2 -194.6 -233.0 1886.8 1720.0 1716.0 1667.0 1852.4 1631.2

68.9 160.2 21.2 -46.3 -109.9 -185.4 1574.3 1461.8 1179.7 1486.9 1285.7 1361.1

76.8 15.9 51.6 -82.1 -173.5 -203.9 394.6 541.5 356.2 213.2 863.3 303.2

68.9 83.4 71.5 -83.4 -104.6 -202.6 78.1 39.7 70.2 47.7 91.4 173.5

-60.9 -19.9 -5.3 7.9 -82.1 -30.5 -66.2 -46.3 -140.4 -68.9 62.2 67.5

-45.0 -68.9 5.3 -38.4 -72.8 -41.0 -112.5 -5.3 -71.5 -33.1 -105.9 -98.0

-50.3 30.5 -7.9 -55.6 141.7 -58.3 1833.8 1428.7 1388.9 1524.0 1864.3 1749.1

PC (1 nM E2)_mean→ 1631.5

(Raw - VC_mean) / PC_mean→ 53.1% 86.3% 52.8% -8.0% -7.4% -3.5% 106.0% 90.7% 100.5% 119.5% 84.5% 93.7%

12.7% 13.4% 6.4% -7.3% -11.9% -14.3% 115.6% 105.4% 105.2% 102.2% 113.5% 100.0%

4.2% 9.8% 1.3% -2.8% -6.7% -11.4% 96.5% 89.6% 72.3% 91.1% 78.8% 83.4%

4.7% 1.0% 3.2% -5.0% -10.6% -12.5% 24.2% 33.2% 21.8% 13.1% 52.9% 18.6%

4.2% 5.1% 4.4% -5.1% -6.4% -12.4% 4.8% 2.4% 4.3% 2.9% 5.6% 10.6%

-3.7% -1.2% -0.3% 0.5% -5.0% -1.9% -4.1% -2.8% -8.6% -4.2% 3.8% 4.1%

-2.8% -4.2% 0.3% -2.4% -4.5% -2.5% -6.9% -0.3% -4.4% -2.0% -6.5% -6.0%

-3.1% 1.9% -0.5% -3.4% 8.7% -3.6% 112.4% 87.6% 85.1% 93.4% 114.3% 107.2%

ID1 ID2 ID3 ID4

log [(M)] mean SD log [(M)] mean SD log [(M)] mean SD log [(M)] mean SD

-5 64.1% 19.2% -4 -6.3% 2.5% -6 99.0% 7.8% -8 99.2% 18.2%

-6 10.8% 3.9% -5 -11.2% 3.6% -7 108.8% 6.0% -9 105.2% 7.3%

-7 5.1% 4.3% -6 -7.0% 4.3% -8 86.1% 12.5% -10 84.5% 6.2%

-8 2.9% 1.9% -7 -9.4% 3.9% -9 26.4% 6.0% -11 28.2% 21.6%

-9 4.6% 0.5% -8 -8.0% 3.9% -10 3.8% 1.2% -12 6.4% 3.9%

-10 -1.8% 1.8% -9 -2.1% 2.8% -11 -5.2% 3.0% -13 1.2% 4.7%

-11 -2.2% 2.3% -10 -3.1% 1.2% -12 -3.9% 3.3% -14 -4.8% 2.4%

log[PCMax (M)], RPCMax, PCMax (M) -5 64.1% 1.00E-05 -9 -2.1% 1.00E-09 -7 108.8% 1.00E-07 -9 105.2% 1.00E-09

log[PC50 (M)], PC50 (M) -5.26 5.44E-06 - - -8.60 2.48E-09 -10.61 2.44E-11

log[PC10 (M)], PC10 (M) -6.15 7.11E-07 - - -9.73 1.87E-10 -11.83 1.46E-12

Testosterone Corticosterone 17α estradiol 17βestradiol

Pass

HLS 14/09/2010 Leslie Akhurst 570 nm

17βestradiol17α estradiolCorticosteroneTestosterone

0%20%40%60%80%

100%120%140%160%180%200%

-14 -12 -10 -8 -6 -4

log[(M)]ID1

0%20%40%60%80%

100%120%140%160%180%200%

-14 -12 -10 -8 -6 -4

log[(M)]ID2

0%20%40%60%80%

100%120%140%160%180%200%

-14 -12 -10 -8 -6 -4

log[(M)]ID3

0%20%40%60%80%

100%120%140%160%180%200%

-14 -12 -10 -8 -6 -4

log[(M)]ID4

11

Page 12: EDSP webinar 2: In vitro assays for the EDSP

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OECD Validated Spreadsheet

12

For PC50 calculation ID1 ID2 ID3 ID4

0.5

log [(M)] log [(M)] log [(M)] log [(M)]

-5 119.0% 1.70E-06 -4 -9.7% x -6 93.5% x -8 123.1% x

-6 29.3% x -5 -10.9% x -7 84.8% x -9 101.1% x

-7 6.8% x -6 -9.4% x -8 89.1% 1.46E-09 -10 92.4% 1.63E-11

-8 1.9% x -7 -9.5% x -9 42.4% x -11 38.7% x

-9 -0.9% x -8 -3.9% x -10 6.1% x -12 3.0% x

-10 -0.2% x -9 -6.4% x -11 -3.0% x -13 -3.3% x

-11 5.5% x -10 -0.2% x -12 -6.2% x -14 -5.1% x

1.70E-06 0.00E+00 1.46E-09 1.63E-11

For PC10 calculation ID1 ID2 ID3 ID4

0.1

log [(M)] log [(M)] log [(M)] log [(M)]

-5 119.0% x -4 -9.7% x -6 93.5% x -8 123.1% x

-6 29.3% 1.39E-07 -5 -10.9% x -7 84.8% x -9 101.1% x

-7 6.8% x -6 -9.4% x -8 89.1% x -10 92.4% x

-8 1.9% x -7 -9.5% x -9 42.4% 1.28E-10 -11 38.7% 1.57E-12

-9 -0.9% x -8 -3.9% x -10 6.1% x -12 3.0% x

-10 -0.2% x -9 -6.4% x -11 -3.0% x -13 -3.3% x

-11 5.5% x -10 -0.2% x -12 -6.2% x -14 -5.1% x

1.39E-07 0.00E+00 1.28E-10 1.57E-12

Raw / VC_mean→ 5.45 7.68 4.67 0.82 0.52 0.45 4.82 4.47 5.34 7.13 5.28 5.90

(fold-induction) 2.20 2.42 2.02 0.39 0.66 0.60 4.96 4.46 4.13 4.90 5.45 5.23

1.51 1.11 1.23 0.57 0.68 0.58 4.86 4.60 4.62 4.43 4.80 5.25

1.19 0.99 1.06 0.58 0.84 0.41 2.90 2.70 2.67 2.67 2.66 2.47

1.08 1.02 0.80 1.18 0.85 0.49 1.12 1.23 1.40 1.21 1.01 1.15

1.00 1.09 0.89 0.81 0.77 0.63 0.90 0.84 0.89 0.80 0.80 1.00

1.29 1.43 0.97 0.60 1.53 0.85 0.74 0.69 0.81 0.80 0.69 0.87

0.99 1.01 0.87 1.18 0.88 1.08 5.13 4.89 5.72 5.47 4.94 4.72

fold-induction of VC_mean→ 1.00 fold-induction of PC_mean→ 5.15

fold-induction of VC_SD→ 0.12 fold-induction of PC_SD→ 0.38

fold-induction of VC_mean + 2SD→ 1.23 fold-induction of corresponding to the PC10→ 1.41

ID1 ID2 ID3 ID4

log [(M)] mean SD log [(M)] mean SD log [(M)] mean SD log [(M)] mean SD

-5 5.94 1.56 -4 0.60 0.20 -6 4.88 0.44 -8 6.10 0.94

-6 2.21 0.20 -5 0.55 0.14 -7 4.52 0.42 -9 5.19 0.27

-7 1.28 0.21 -6 0.61 0.06 -8 4.69 0.15 -10 4.83 0.41

-8 1.08 0.10 -7 0.61 0.22 -9 2.76 0.13 -11 2.60 0.11

-9 0.96 0.15 -8 0.84 0.35 -10 1.25 0.14 -12 1.13 0.10

-10 0.99 0.10 -9 0.73 0.10 -11 0.88 0.03 -13 0.86 0.11

-11 1.23 0.24 -10 0.99 0.48 -12 0.74 0.06 -14 0.79 0.09

17α estradiol 17βestradiol

Testosterone Corticosterone 17α estradiol 17βestradiol

Testosterone Corticosterone 17α estradiol 17βestradiol

Testosterone Corticosterone

0.0

1.0

2.0

3.0

4.0

5.0

6.0

-12 -11 -10 -9 -8 -7 -6

log[(M)]

VC ID3 PC

0.01.02.03.04.05.06.07.08.0

-11 -10 -9 -8 -7 -6 -5

log[(M)]

VC ID1 PC

0.0

1.0

2.0

3.0

4.0

5.0

6.0

-10 -9 -8 -7 -6 -5 -4

log[(M)]

VC ID2 PC

0.01.02.03.04.05.06.07.08.0

-14 -13 -12 -11 -10 -9 -8

log[(M)]

VC ID4 PC

Page 13: EDSP webinar 2: In vitro assays for the EDSP

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ER Transcriptional Activation Assay –

our experience

All 10 proficiency chemicals listed in 2009 guideline tested (2012

guideline now lists 14 chemicals – only 4 from 2009 guideline)

7 positive chemicals all confirmed as positive

Corticosterone and atrazine confirmed as negative

Dibutyl phthalate was negative in 2 tests and weakly positive in 2

tests. Other labs have also experienced this. On examination of the

CERI draft validation report, a positive response was observed for

DBT based on logPC10 but not logPC50 values, which is what we

also observed.

Use of an antagonist (4-hydroxytamoxifen) eliminated the response

shown by dibutyl phthalate - therefore true ER binding

13

Page 14: EDSP webinar 2: In vitro assays for the EDSP

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ER Transcriptional Activation

Assay – our experience

Edge effects - if suspected the plate layout should be altered.

Overall we concluded that there were no edge effects but we

did observe row and column effects for untreated plates.

However, the levels of statistical significance using Tukey’s

test were lower than observed in the CERI validation report

No test substances found positive to date, but when we do,

should we also test using an ERα antagonist to confirm that

the response is ERα-specific?

14

Page 15: EDSP webinar 2: In vitro assays for the EDSP

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ER Transcriptional Activation Assay –

Challenges

Acceptance criteria for reference chemicals are not met on

every occasion. Often values (PC10, EC50 etc) lie just outside

the ranges. Gary Timm at the EPA e-mailed me: “we regard

the performance criteria as "acceptance" criteria, not

"rejection" criteria, so missing one by a small margin will not

invalidate your results during EPA review”.

CVs are sometimes >20% for triplicate cultures. However,

data sent to me by CERI has shown their CVs to be >20% as

well! No mention of CV in validation report.

15

Page 16: EDSP webinar 2: In vitro assays for the EDSP

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SAP Review The EPA’s 2013 SAP review of the Tier 1 tests included 19

chemicals for the ER TA assay (one from HLS):

All response curve parameters for the strong estrogen agonist (17β-

estradiol) were met for 10 of the 19 chemicals. Nevertheless, out-of-

range values were mostly very close to the test guideline ranges

Response curve parameters for the weak estrogen agonist (17α-

estradiol) were met for only 5 of the 19 chemicals. Nevertheless, out-

of-range values were mostly very close to the guideline ranges

All of the test facilities had difficulties meeting the Guideline ranges for

the very weak estrogen agonist, 17α-methyltestosterone

Conclusion: while performance criteria were generally not met for the

majority of the chemicals, out-of-range values were often close to the

Guideline ranges. All but one chemical were classified as either

negative or positive in the assay, however inability to fulfil the

performance criteria may affect the interpretation of at least 8 of 19

chemicals.

16

Page 17: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Assay

OCSPP 890.1550 (Oct 2009)

OECD 456 (July 2011)

Human H295R adreno-carcinoma cell line

Expresses genes that encode all key enzymes in

steroidogenesis pathway

Cells produce all steroid hormones found in adult adrenal

cortex and gonads

Assay validated by Hecker et al for detection of testosterone

and 17β-estradiol (E2) - for agonists and antagonists

17

Page 18: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Assay

Establish cells in 24 well plate for 24 h

Use only cells between 4 and 10 passages from frozen

Expose cells to 6 conc. of test chemical in triplicate.

Concentrations should not exceed solubility limit; 100 µM is

max concentration.

Cell viability assessed using MTT; wells with <80% viability

not included in data analysis

Include known inhibitor (prochloraz) and inducer (forskolin) on

a separate QC plate

48 h incubation then remove supernatants for hormone

analysis

We use ELISA (mass spec is an alternative)

Test conducted on three independent occasions

18

Page 19: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Pathways

19

Page 20: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Assay – Acceptance

Criteria

All measurements given as fold

increase/decrease relative to solvent control

QC plate must meet acceptability ranges for

induction and inhibition

Chemical positive if fold induction/inhibition is

statistically significant at two adjacent

concentrations in at least 2 of the 3 tests

Within plate CVs should be ≤ 30%

20

Page 21: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Assay – QC Plate

Acceptance Criteria

Testosterone Estradiol

Minimal basal production 500 pg/mL 40 pg/mL

Basal production ≥ 5 times MDL ≥ 2.5 times MDL

Induction (10 µM

forskolin)

≥ 2 times SC (amended to ≥ 1.5 times in

OECD guideline and SEP

document)

≥ 7.5 times SC

Inhibition (1 µM

prochloraz) ≤ 0.5 times SC ≤ 0.5 times SC

21

Page 22: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Assay- Challenges Narrow window for passage number, but should wait for results

from 1st test in order to set concentrations for 2nd and 3rd tests, so

not always possible to use one frozen vial of cells for all 3 tests

Need to measure potential interference of test chemical with ELISA

QC plate - not always possible to achieve a 2 fold induction in

testosterone over negative control for forskolin (often values around

1.7-1.8 fold). Communication with EPA reassured us that their lab

also experienced this. EPA stated that these were acceptance

criteria not rejection criteria, so the report will not automatically be

disqualified if acceptance criteria are not met. SEP document and

OECD TG has since lowered acceptance limit to 1.5 fold.

Occasionally other criteria not met but usually very close to

acceptance range

Interplate CV (between tests) for solvent controls sometimes >30%

22

Page 23: EDSP webinar 2: In vitro assays for the EDSP

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Steroidogenesis Assay – SAP Review

Four of the five performing laboratories (16 of 18 compounds) did not

provide data and results for the laboratory proficiency test which is

recommended to demonstrate laboratory proficiency with running the

assay (HLS provided summary data).

All intraplate coefficients of variation (CVs) were within acceptable limits

(≤30%), but interplate CVs for some studies were ≥30%.

Conclusion: the laboratories performance of the assay was generally

consistent across all 18 test compounds, and the performance criteria

were generally met for all compounds. In most cases where the

performance criteria were not met, the values only slightly exceeded the

expected values and did not impact the interpretation or reliability of the

study. The results demonstrate that the Steroidogenesis Assay as

performed by the testing laboratories can distinguish between chemicals

that alter or do not alter testosterone and/or estrogen levels in vitro.

23

Page 24: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) Assay

US-EPA OCSPP 890.1200

Human recombinant microsomes

Human CYP19 and human P450 reductase

24

Page 25: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) Assay

Measures conversion of [3H]androstendione

(ASDN) to estrone by release of 3H2O

25

Page 26: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) assay

Assay

Conducted in polypropylene test tubes

Buffer

[3H]androstendione

NADPH

Propylene glycol

Test article (or controls)

Microsomal protein

Incubation time – 15 minutes

Stop – methylene chloride (DCM)

26

Page 27: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) assay

8 concentrations of test article

Ideally log M -3 to log M -10 in triplicate

8 concentrations of positive control

log M -5 to log M -10 in duplicate

Full activity control - quadruplicate

Background control - quadruplicate

27

Page 28: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) Assay

Controls:

Positive control – formestane

Full activity control – solvent instead of test article

Background activity controls – solvent with buffer

instead of NADPH

28

Page 29: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19 assay)

Analysts best friend

29

Page 30: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19 assay)

Analyst specific – full proficiency assessment is

required for each analyst

Proficency chemicals:

Formestane, econazole, fenarimol, nitrofen and

atrazine

30

Page 31: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19 assay)

Our experience

Generally straight forward

Improved full control activities by using a smaller

volume of chilled recombinant microsomes

Improved reproducibility using the Hamilton Robot

for liquid handling steps

31

Page 32: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) Assay –

guideline criteria

32

Performance Criteria for Aromatase

Assay Parameter

Recommended Values

Minimum Aromatase Activity 0.1 nmol/mg-protein/min

Mean Background Control

Activity

≤ 10% of Full Activity

Coefficient of Variation (CV) for

replicates within each sample type

and concentration of 4-OH ASDN

<15%

Criteria for Positive Control Response Curves

Parameter Lower

Limit

Upper Limit

Slope -1.2 -0.8

Top (%) 90 110

Bottom (%) -5 +6

Log IC50 -7.3 -7.0

Page 33: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) Assay

Performance criteria from positive control (n=12)

33

Parameter Lower limit

criteria

Upper limit

criteria

Actual lower

limit

Actual upper

limit

Slope -1.2 -0.8 -1.010 -0.812

Top (%) 90 110 90.1 107.2

Bottom (%) -5 +6 0.1 1.1

Log IC50 (M) -7.3 -7.0 -7.74 -7.30

Page 34: EDSP webinar 2: In vitro assays for the EDSP

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Aromatase (CYP19) Assay – SAP

review

SAP – review of 18 compounds • Performance criteria was generally met in each study

• Some studies lacked mid-log concentrations

• Deviations from performance criteria were minor

• Overall the assays from the labs were able to distinguish

between inhibitors and non-inhibitors of this activity

34

Page 35: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen receptor (ER) binding

assay

US-EPA OCSPP 890.1250

Rat uterine cytosol preparation

Saturation binding experiments

Competitive binding experiments

35

Page 36: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Saturation binding

Optimal protein concentration determination for saturation

binding

(0.03 nM [3H]-17-estradiol ; 25-35% binding)

Saturation binding: estradiol (8 conc)

Competitive binding

Optimal protein concentration determination for

competitive binding

(1.0 nM [3H]-17-estradiol ; 10-15% binding)

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Page 37: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Saturation assay:

Day 1

TEDG + PMSF buffer

[3H]-17-estradiol (8 conc: 0.3 nM – 3 nM)

Cold 17 -estradiol (100 label)

Uterine cytosol

Incubation (4ºC for 16 – 20 hours)

37

Page 38: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Saturation assay:

Day 2

60% (v/v) Hydroxyapatite (HAP) in TEDG + PMSF

added to assay tubes

Incubated at 4ºC for 5 minutes with 10 sec vortex in

between (3 times)

After 3rd vortex 2 ml cold TEDG + PMSF buffer

added then vortex

Centrifuge at 1000 g for 10 min @ 4ºC. SNT

decanted.

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Page 39: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Saturation assay continued:

Day 2

Repeated twice more

After 3rd centrifugation, drain tube, 1.5 mL ethanol

added, incubate with ethanol and 3 vortex at 5 min

intervals, centrifuged again

Supernatant (1 mL) added to 14 mL scintillation

fluid for liquid scintillation counting

39

Page 40: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Saturation binding requirements:

3 Runs

Specific binding curve

Linear Scatchard plot

Kd = 0.03 to 1.5 nM

Bmax = 10 to 150 fmol ER/100 µg protein

40

Page 41: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Competitive binding assay • Solvents: absolute ethanol (max 3%), water and DMSO (max 10%)

• Solubility test undertaken to ascertain whether final concentration of

1 mM is achievable

• If required lower concentration is prepared at log = -3.5 M then by half-

log molar decrease until solubility can be achieved

• Not soluble at 1 µM or above in ETOH, DMSO or H2O and is not

interactive at 1 µM, the chemical is classified as “equivocal” or

“equivocal” up to conc tested rather than “not interactive”

41

Page 42: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Competitive binding assay continued

Negative control: Octyltriethoxysilane

(8 concentrations between: log Molar -3 to -10)

Weak positive control: 19-Norethindone (or

norethynodrel)

(8 concentrations between: log Molar -4 to -8.5)

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Page 43: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Competitive binding assay continued

Reference chemical: 17-Estradiol

(7 concentrations between: log Molar -8 to -11)

Test chemical:

(8 concentrations between : log Molar -3 to -10)

43

Page 44: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay

Analyst specific – full proficiency assessment is

required for each analyst

44

Page 45: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay – guideline criteria and our

experience Competitive Binding Assay Performance Criteria

Criterion Tolerance Limit(s)

Radioinert 17β-estradiol fitted curve parameters

Loge(residual Std. Dev.) ≤2.35 (0.93 to 2.17)

Top (% binding) 94 to 111 (81 to 141)

Bottom (% binding) -4 to 1 (-3.6 to 2.2)

(Hill) Slope (log10(M)-1) -1.1 to -0.7 (-1.1 to -0.6)

Weak Positive control (norethynodrel) fitted curve parameters (19-norethindrone)

Loge(residual Std. Dev.) ≤2.60 (1.46 to 2.21)

Top (% binding) 90 to 110 (87 to 128)

Bottom (% binding) -5 to 1 (-15.4 to 2.7)

(Hill) Slope (log10(M)-1) -1.1 to -0.7 (-1.2 to -0.6)

Solvent concentration

Ethanol ≤3%

DMSO ≤10%

Negative control (octyltriethoxysilane)

does not displace more than 25% of

[3H]-17β-estradiol from the ER on

average across all concentrations

≤25%

45

Page 46: EDSP webinar 2: In vitro assays for the EDSP

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Estrogen (ER) receptor binding

assay – SAP review

SAP – review of 18 compounds • Performance was generally consistent across the compounds

• Not all assays met the performance criteria

• Overall the laboratories performance was generally acceptable

46

Page 47: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

US-EPA OCSPP 890.1150

Rat ventral prostate cytosol preparation

Saturation binding experiments

Competitive binding experiments

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Page 48: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Saturation binding

Optimal protein concentration determination for saturation

binding

(0.25 nM [3H]-R1881 ; 25-35% binding)

Saturation binding: [3H]-R1881 (8 conc)

Competitive binding

Optimal protein concentration determination for

competitive binding

(1.0 nM [3H]-R1881 ; 10-15% binding)

48

Page 49: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Saturation assay:

Day 1

Low salt TEDG buffer

[3H]-R1881 (8 conc: 0.25 nM – 10 nM)

Triamcinolone acetonide

Cold R1881 (100 label)

Rat prostate cytosol

Incubation (4ºC for 20 hours)

49

Page 50: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Saturation assay:

Day 2

60% (v/v) Hydroxyapatite (BIO-RAD HT-GEL) in

50 mM Tris buffer

Added 100 µl of incubation mixture to HAP assay

tubes

Incubated at 4ºC for 20 minutes with vortex-mixing

every 5 minutes for 10 sec

Centrifuge for 3 minutes at 4ºC at 600 g

50

Page 51: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Saturation assay:

Day 2 continued

Wash pellet with 50 mM Tris, pH 7.4 (4ºC); 4 times

in all with centrifugation in between

After 4th wash add 2 mL ethanol, incubate for 10

mins, vortex at 5 min intervals, centrifuge for 10 min

Supernatant (1 mL) added to 14 mL scintillation

fluid for liquid scintillation counting

51

Page 52: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Saturation binding requirements:

3 Runs

Specific binding curve

Linear Scatchard plot

Kd = 0.685 to 1.57 nM

Bmax = 10 to 150 fmol AR/100 µg protein

52

Page 53: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Competitive binding assay

Receptor conc optimised for protein which binds 10

to 15% at 1 nM [3H]-R1881

Weak positive control: Dexamethasone

(8 concentrations between : log Molar -3 to -10)

Reference chemical: R-1881

(5 concentrations between: log Molar -7 to -11)

Test chemical

(8 concentrations between: log Molar -3 to -10)

53

Page 54: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay

Analyst specific – full proficiency assessment is

required for each analyst

54

Page 55: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay – guideline criteria and our

experience

Parameter Unit R1881 Dexamethasone

Lower limit Upper Limit Lower limit Upper Limit

Bottom

plateau

level

% binding -2.0

(1.104)

2.0

(1.794)

-12

(7.369)

12

(15.65)

Top plateau

level

% binding 82

(99.1)

114

(105.9)

87

(97.3)

106

(101.9)

Hill Slope Log10 (M)-1 -1.2

(-1.174)

-0.8

(-0.890)

-1.4

(-8.947)

-0.6

(-1.179)

55

Page 56: EDSP webinar 2: In vitro assays for the EDSP

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Androgen (AR) receptor binding

assay – SAP review

SAP review of 18 compounds

Saturation binding performance criteria were not

meet for all cytosol preparations

Competitive binding

cytosol still could identify test chemicals which were

“ AR binders”

Control chemicals either met or slightly exceeded

the performance criteria

Assays submitted were generally acceptable and

the data was considered reliable.

56

Page 57: EDSP webinar 2: In vitro assays for the EDSP

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SEP

Standard Evaluation Protocol

Issued by EPA in September 2011 for each study

type

Provides guidance to EPA staff reviewing data

SEP and DER documents make it clear that EPA

expects to see data from lab proficiency tests

57

Page 58: EDSP webinar 2: In vitro assays for the EDSP

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DER

Data Evaluation Record

To help EPA review of data, the DER

standardises how the data are reported for each

study type

Lists deviations from protocol or information

missing from report

Additional to CROs own report

HLS has completed many DERs which have

been submitted and reviewed by the EPA. No

comments received on the DERs to date

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Page 59: EDSP webinar 2: In vitro assays for the EDSP

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Challenges to labs performing ED tests

Time consuming to set up

Many proficiency chemicals to test, on at least one occasion

Proficiency chemicals should be tested for each person

conducting test, and should be repeated if lab personnel

change

Acceptability criteria not always met - if close to range you

must judge whether EPA will accept study

EPA expect to see proficiency data in the study report (but

proficiency is a separate study……)

DER document adds to time taken to report data

HLS has experienced and overcome all these challenges!

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Page 60: EDSP webinar 2: In vitro assays for the EDSP

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How You Can Help Your Studies Run

Smoothly

These tests can be lengthy to conduct, especially as

they have to be conducted on 2 or 3 occasions, and

may be repeated if acceptance criteria are not met.

Allow sufficient months for testing to be conducted in

advance of your deadline

Provide relevant data on the test substance e.g.

solubility in organic (DMSO, ethanol) and aqueous

solvents

Instruct CRO in advance whether you need them to

prepare your DER

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Page 61: EDSP webinar 2: In vitro assays for the EDSP

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Summary

HLS offers all 5 in vitro assays (and all 6 in vivo)

Experience gained since 2009

When setting up assays, HLS had contact with

EPA for advice

Many studies completed

Thorough understanding of EDSP program

Experienced at preparing DER documents in

addition to study reports

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Page 62: EDSP webinar 2: In vitro assays for the EDSP

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In Vitro Endocrine Disruptor Assays

Thank you for listening!

62

Page 63: EDSP webinar 2: In vitro assays for the EDSP

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Other webinars this week

Wednesday 22nd

EDSP Tier 1 In Vivo Mammalian Assays

Bob Parker

Thursday 23rd

Amphibian metamorphosis assay for the

EPA’s EDSP

Carole Jenkins

Page 64: EDSP webinar 2: In vitro assays for the EDSP

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HLS EDSP expert team

Ephi Gur – Team lead and Regulatory

Bob Parker – Toxicology

Will Davies – Toxicology

John Carter – In vitro technologies

Carole Jenkins – Aquatic toxicology

Contact via me

[email protected]

+44 (0) 1480 892031


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