Electronic Supporting Information (ESI)
Unraveling the Protonation Site of Oxazole and Solvation with Hydrophobic
Ligands by Infrared Photodissociation Spectroscopy
Kuntal Chatterjee and Otto Dopfer* Institut für Optik und Atomare Physik, TU Berlin, Hardenbergstr. 36, 10623 Berlin, Germany.
* Corresponding author: [email protected]
Figure S1. Optimized structures of various H+Ox isomers calculated at the B3LYP-D3/aug-cc-pVTZ
level. Relative energies and free energies (E0, G0) and bond lengths are given in kJ mol-1 and Å,
respectively.
Figure S2. Linear IR absorption spectra of neutral Ox and various H+Ox isomers obtained at the
B3LYP-D3/aug-cc-pVTZ level.
Figure S3. NBO atomic charge distributions (in e) of Ox, H+Ox, and H+Ox-L(H) dimers with L=Ar and
N2 obtained at the B3LYP-D3/aug-cc-pVTZ level.
Figure S4. Orbital interaction between the σ* orbital of the N-H bond and the lone pair of L involved in
the NH…L H-bond in the H+Ox-L1,2 clusters (L=Ar and N2) obtained from the NBO analysis at the
B3LYP-D3/aug-cc-pVTZ level. The numbers are E(2) values in kJ mol-1.
Figure S5. Visualization of the NCI analysis of the NH…L H-bond in the H+Ox-L(H) dimers (L=Ar and
N2) calculated at the B3LYP-D3/aug-cc-pVTZ level. The numbers are ρ* values in a.u.
Figure S6. Optimized structures of H+Ox and various H+Ox-N2 isomers calculated at the B3LYP-
D3/aug-cc-pVTZ level. Binding energies (D0) and bond lengths are given in cm-1 and Å, respectively.
Numbers in parentheses correspond to relative energies and free energies in cm-1 (E0, G0).
Figure S7. Comparison of linear IR absorption spectra of various H+Ox-N2 isomers obtained at the
B3LYP-D3/aug-cc-pVTZ level to the measured IRPD spectrum.
Figure S8. Comparison of linear IR absorption spectra of Ar/N2-bound O- and C-protmers calculated
at the B3LYP-D3/aug-cc-pVTZ level to the measured IRPD spectra.
Figure S9. Optimized structures of two H+Ox-(N2)3 isomers calculated at the B3LYP-D3/aug-cc-pVTZ
level. Binding energies (D0) and bond lengths are given in cm-1 and Å, respectively. Numbers in
parentheses correspond to relative energies and free energies in cm-1 (E0, G0).
Figure S10. Optimized structure of the H+Ox-(N2)4(2H/2π) isomer along with its linear IR absorption
spectrum calculated at the B3LYP-D3/aug-cc-pVTZ level. The total binding energy (D0) and bond
lengths are given in cm-1 and Å, respectively.
Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics.This journal is © the Owner Societies 2019
Figure S1
Figure S2
Figure S3
Figure S4
17.3 42.2
41.1
2.7
29.8
Figure S5
-ρ* = 0.01278 -ρ* = 0.02205
Figure S6
Figure S7
Figure S8
Figure S9
Figure S10
Table S1. Experimental and theoretical (B3LYP-D3/aug-cc-pVTZ) structural parameters of neutral Ox
and respective changes upon N-protonation.
a A. Kumar, J. Sheridan and O. L. Stiefvater, Z. Naturforsch. A, 1978, 33, 145–152.
structural parameters Ox H+Ox
calc expa Calc
rO1C2 1.3556 1.357 1.3056
rC2N3 1.2879 1.291 1.3134
rN3C4 1.3899 1.395 1.3921
rC4C5 1.3497 1.352 1.3439
rC5O1 1.3693 1.369 1.3777
rC2H2 1.0763 1.075 1.0778
rC4H4 1.0737 1.075 1.0748
rC5H5 1.0754 1.073 1.0745
rN3H3 1.0125
< (C5O1C2) 104.2 103.9 107.9
< (O1C2N3) 114.5 114.9 109.8
< (C2N3C4) 104.4 103.9 108.8
< (N3C4C5) 109.0 109.0 105.3
< (C4C5O1) 107.9 108.1 108.2
< (O1C2H2) 116.9 117.0 121.6
< (N3C4H4) 122.0 121.8 122.9
< (O1C5H5) 117.0 116.8 117.1
Cartesian coordinates of relevant optimized structures
Ox
C 0.00000000 1.10171400 0.00000000 C -0.75239200 -0.87674700 0.00000000 C 0.59443600 -0.96493500 0.00000000 H 0.16665200 2.16500200 0.00000000 H -1.48218800 -1.66666300 0.00000000 H 1.30418100 -1.77054800 0.00000000 O 1.09895700 0.30802400 0.00000000 N -1.11893800 0.46397500 0.00000000
H+Ox(N)
C -1.06446800 0.33785000 0.00000000 C 1.13523900 0.30147600 0.00000000 C 0.67439900 -0.96092300 0.00000000 H -2.10313100 0.62547400 0.00000000 H 2.13331500 0.70022400 0.00000000 H 1.13309000 -1.93257100 0.00000000 O -0.70261500 -0.91663000 0.00000000 N 0.00000000 1.10713900 0.00000000 H -0.01337700 2.11952200 0.00000000
H+Ox(C2)
C 0.63544400 0.96535400 0.00000000 C -1.16534700 -0.27721900 0.00000000 C 0.00000000 -1.15407400 0.00000000 H 1.06460100 1.41452200 0.90006100 H -2.20181100 -0.58252800 0.00000000 H 0.07023400 -2.23684900 0.00000000 O 1.06468500 -0.47650900 0.00000000 N -0.76224100 0.94257700 0.00000000 H 1.06460100 1.41452200 -0.90006100
H+Ox(C4)
C 0.68472500 0.96108300 0.00000000 C -1.15404800 -0.21628400 0.00000000 C 0.00000000 -1.13599200 0.00000000 H 1.53179100 1.62927600 0.00000000 H -1.80156900 -0.37215100 0.87431100 H 0.02924000 -2.22116300 0.00000000 O 1.08456200 -0.49986500 0.00000000 N -0.54549300 1.09746800 0.00000000 H -1.80156900 -0.37215100 -0.87431100
H+Ox(C5)
C 0.00000000 -1.11853300 0.00000000 C 0.82205900 0.81773600 0.00000000 C -0.64676900 0.97513500 0.00000000 H -0.08693000 -2.19905700 0.00000000 H 1.54508800 1.62464800 0.00000000 H -1.05432800 1.46279800 0.89106600 O -1.07461900 -0.41555000 0.00000000 N 1.17081500 -0.43897400 0.00000000 H -1.05432800 1.46279800 -0.89106600
H+Ox(O)
C 1.18136400 -0.12553100 0.00379800 C -0.88998300 -0.79895100 0.00944600 C -1.05268300 0.52247900 0.00123900 H 2.23068100 0.11938100 -0.01518000 H -1.65267400 -1.55843700 0.01056300 H -1.87192800 1.21898600 -0.01373600 O 0.26050700 1.08254000 -0.05544800 N 0.47432600 -1.14180800 0.00815300 H 0.45739400 1.96442500 0.31797600
H+Ox-Ar(H)
C 1.08941700 1.11118400 0.00000000 C -1.10532800 1.22455200 0.00000000 C -0.60165100 2.47064400 0.00000000 H 2.11712800 0.78731700 0.00000000 H -2.11649600 0.86064700 0.00000000 H -1.02644000 3.45747500 0.00000000 O 0.77282800 2.37892200 0.00000000 N 0.00000000 0.37955900 0.00000000 H -0.02229400 -0.63607000 0.00000000 Ar -0.07939700 -3.05533000 0.00000000
H+Ox-Ar(π)
C -0.89530900 -0.91024400 -0.69174400 C -1.30180700 0.36602800 1.05246700 C -1.24362100 1.13266800 -0.04962000 H -0.69442900 -1.73295000 -1.35779400 H -1.47505700 0.60778100 2.08512700 H -1.34766900 2.18400700 -0.24454200 O -0.99156300 0.31581400 -1.12950100 N -1.07791300 -0.93340500 0.60832600 H -1.04719900 -1.76434900 1.18544400 Ar 2.26037100 0.06567300 0.06904900
H+Ox-Ar2(2H)
C 0.02393700 -1.82081300 0.00000000 C 1.92267400 -0.71412800 0.00000000 C 2.18375200 -2.03265200 0.00000000 H -1.01425200 -2.10758800 0.00000000 H 2.56718500 0.14558200 0.00000000 H 3.07938800 -2.62589900 0.00000000 O 0.98314600 -2.70875600 0.00000000 N 0.53588000 -0.61315900 0.00000000 H 0.00000000 0.24799700 0.00000000 Ar 0.41741100 2.78954100 0.00000000 Ar -2.69690200 0.41643800 0.00000000
H+Ox-Ar2(H/π)
C 0.53269900 -0.87033000 1.08612500 C 0.48909100 -1.27165100 -1.07337100 C 1.70372000 -1.58767100 -0.59282000 H 0.29747600 -0.59221800 2.09988300 H 0.07600600 -1.32073800 -2.06409600 H 2.60926700 -1.97374900 -1.02278400 O 1.71058900 -1.33223300 0.76039200 N -0.23562100 -0.81926000 0.02390000 H -1.19586000 -0.48921900 0.01289200 Ar -3.47009500 0.34751900 -0.00854700 Ar 1.79368900 2.04951000 -0.09122700
H+Ox-Ar2(2π)
C -0.87999000 -0.05863000 0.00000000 C 1.13263200 0.82584400 0.00000000 C 1.24064100 -0.51347900 0.00000000 H -1.94338000 -0.22990700 0.00000000 H 1.87340400 1.60418700 0.00000000 H 2.06298300 -1.20452000 0.00000000 O -0.02834400 -1.04770400 0.00000000 N -0.23389400 1.08407400 0.00000000 H -0.66850600 1.99785300 0.00000000 Ar -0.23389400 -0.08047000 3.33161100 Ar -0.23389400 -0.08047000 -3.33161100
H+Ox-N2(H)
C 1.06135700 -0.95359700 0.00000000 C -1.13319500 -0.98989300 0.00000000 C -0.67482600 -2.25344200 0.00000000 H 2.10000000 -0.66729900 0.00000000 H -2.13122100 -0.59158300 0.00000000 H -1.13454600 -3.22442000 0.00000000 O 0.70165400 -2.21074100 0.00000000 N 0.00000000 -0.18303500 0.00000000 H 0.01248300 0.83771400 0.00000000 N 0.00740800 2.86890300 0.00000000 N -0.00454600 3.95886200 0.00000000
H+Ox-N2(π)
C -0.84563200 -0.97172600 -0.57768700 C -1.17080300 0.52897900 0.99522500 C -1.03282700 1.15291300 -0.18697300 H -0.70425400 -1.88080200 -1.13805800 H -1.33966200 0.90436800 1.98784600 H -1.04807600 2.17884700 -0.50508600 O -0.83531800 0.19720600 -1.15786800 N -1.05044000 -0.82702100 0.71092500 H -1.09736000 -1.58382200 1.38107300 N 2.07257400 -0.07404800 0.06169100 N 3.14464800 0.12146400 0.10649600
H+Ox-(N2)2(2H)
C -0.61364800 1.48807300 0.00000000 C -2.11549600 -0.11233500 0.00000000 C -2.74381900 1.07579600 0.00000000 H 0.29817200 2.05951000 0.00000000 H -2.49014500 -1.11932000 0.00000000 H -3.77178500 1.38756000 0.00000000 O -1.78708100 2.06651400 0.00000000 N -0.75717200 0.18510000 0.00000000 H 0.00000000 -0.49582400 0.00000000 N 2.47353600 0.46366500 0.00000000 N 3.56267200 0.40824500 0.00000000 N 0.89548000 -2.41059600 0.00000000 N 1.41093800 -3.37116200 0.00000000
H+Ox-(N2)2(H/π)
C 0.38742100 -0.79879200 1.08033900 C 0.33600900 -1.12119000 -1.08843100 C 1.54315800 -1.48229800 -0.62049900 H 0.15866000 -0.55255200 2.10343900 H -0.07651400 -1.12676100 -2.08045400 H 2.43882700 -1.87482000 -1.06474600 O 1.55495300 -1.27775000 0.74022600 N -0.38024300 -0.69270600 0.02282100 H -1.33761800 -0.34116100 0.02312200 N 1.75483800 1.80068200 0.00798600 N 2.27094700 2.74638900 -0.16183500 N -3.25447300 0.35497200 -0.00385000 N -4.27999800 0.72365900 -0.02678300
H+Ox-N2(2π)
C -0.85933700 0.44145800 0.00000000 C 1.33267900 0.30263800 0.00000000 C 0.81249300 -0.93641700 0.00000000 H -1.88192600 0.77869100 0.00000000 H 2.34851500 0.65253600 0.00000000 H 1.22600100 -1.92762700 0.00000000 O -0.55872500 -0.82787600 0.00000000 N 0.23897400 1.15951800 0.00000000 H 0.27260900 2.17042400 0.00000000 N -0.24583000 0.01586600 3.03932500 N -0.24583000 -0.15970300 4.11577500 N -0.24583000 0.01586600 -3.03932500 N -0.24583000 -0.15970300 -4.11577500
H+Ox-(N2)3(2H/π)
C -0.78083200 0.10903100 -1.23470700 C -1.08665100 -1.68713300 -0.01411300 C -2.22759100 -1.40135000 -0.66450800 H -0.37732000 0.97820700 -1.72323900 H -0.83287100 -2.47408900 0.67167600 H -3.20422100 -1.84605800 -0.70776800 O -2.01552900 -0.27594200 -1.42770100 N -0.18213400 -0.70683200 -0.40230800 H 0.78072700 -0.62720100 -0.08337300 N 2.17582300 1.44149600 -0.96023400 N 3.04480600 2.09431300 -1.04951800 N 2.52936200 -1.17518700 0.99035600 N 3.45573300 -1.40952000 1.51506300 N -2.11438700 1.29649500 1.32796100 N -2.57658100 1.89543300 2.11357600
H+Ox-(N2)3(H/2π)
C -0.95395700 -0.35021600 0.00000000 C 1.22201100 -0.61185600 0.00000000 C 0.63502300 -1.82097500 0.00000000 H -1.95609200 0.04282800 0.00000000 H 2.25584700 -0.32001200 0.00000000 H 0.99293000 -2.83344900 0.00000000 O -0.72759700 -1.63681700 0.00000000 N 0.18033900 0.30625500 0.00000000 H 0.27250400 1.32108700 0.00000000 N -0.35944100 -0.81404600 3.04406300 N -0.35944100 -0.98213700 4.12170600 N -0.35944100 -0.81404600 -3.04406300 N -0.35944100 -0.98213700 -4.12170600 N 0.48474900 3.35734200 0.00000000 N 0.60655200 4.44053600 0.00000000
H+Ox-(N2)4(2H/2π)
C -0.75417300 -0.82214100 0.00000000 C 1.42690200 -1.03574600 0.00000000 C 0.86765800 -2.25790900 0.00000000 H -1.76190500 -0.44725800 0.00000000 H 2.45353200 -0.71995100 0.00000000 H 1.24811400 -3.26203700 0.00000000 O -0.49889500 -2.10399700 0.00000000 N 0.36514800 -0.14190900 0.00000000 H 0.44199600 0.87177800 0.00000000 N -1.79529500 2.26431200 0.00000000 N -2.41740800 3.15998100 0.00000000 N 1.45524400 2.74961700 0.00000000 N 1.91770200 3.73679600 0.00000000 N -0.15395100 -1.25545200 3.04407000 N -0.15395100 -1.25545200 -3.04407000 N -0.15395100 -1.40864400 4.12392000 N -0.15395100 -1.40864400 -4.12392000