RESEARCH ARTICLE
Evaluation of multimeric siRNA conjugates for efficientprotamine-based delivery into breast cancer cells
Hyundong Yoo • Hyejung Mok
Received: 10 December 2013 / Accepted: 16 February 2014
� The Pharmaceutical Society of Korea 2014
Abstract Despite the preferable properties of well-defined
cationic peptides for small interfering RNA (siRNA) deliv-
ery, their application as siRNA carriers remains limited due
to their poor binding affinity with short-chain RNAs. In this
study, we investigated the feasibility of a novel strategy for
circumventing this limitation, by assessing the utility of
multimeric conjugates of siRNA for improving the binding
affinity of siRNAs with cationic peptides and the extent of
intracellular delivery. Protamine, a natural and arginine-rich
peptide, was used to produce stably condensed polyelectro-
lyte complexes (PECs) with multimeric siRNAs (multi-
siRNA) with a size of 120 nm while conventional siRNA/
protamine particles are over 500 nm. The formulated multi-
siRNA/protamine PECs showed greatly enhanced stability,
intracellular uptake, and biocompatibility compared to
conventional, monomeric (mono)-siRNA/protamine parti-
cles. With the addition of chloroquine, multi-siRNA/prot-
amine PECs successfully inhibited target gene expression in
MDA-MB-435 cells, a breast cancer cell line, even in the
presence of serum protein. This study demonstrates that
multi-siRNA conjugates greatly facilitate the formulation of
nano-sized protamine-based carriers and significantly
improve intracellular delivery in vitro compared to common
siRNAs, and therefore may provide a platform for the design
of peptide-based siRNA delivery systems for in vivo
applications.
Keywords Functional peptide � Protamine � Multimeric
siRNA � Charge density � Gene silencing
Introduction
Peptide-based carriers have received attention as promising
candidate materials for the delivery of therapeutic genes,
drugs, and proteins due to their favorable characteristics,
e.g., well-defined structure, ease of synthesis, reproduc-
ibility, and biocompatibility (Huang et al. 2013; Yewale
et al. 2013). Thus, diverse functional peptides, such as
fusogenic peptides and cell-penetrating peptides, have been
intensively studied as potential carriers for therapeutic
genes such as small interfering RNAs (siRNAs) (Kumar
et al. 2008; Meade and Dowdy 2007; Scholz and Wagner
2012). Peptide carriers allow enhanced delivery of nucleic
acids by forming nano-sized particles via noncovalent
interactions (mainly electrostatic interactions) as well as
attaching to nucleotides via direct chemical conjugation
(Kim and Kim 2009; Meade and Dowdy 2007). Negatively
charged nucleic acids can form nano-sized polyelectrolyte
complexes (PECs) with cationic peptides, which is popular
formulation method due to its simple processes and the
favorable translocation of PECs into the cytoplasm. The
biological performances of formulated PECs, e.g. intra-
cellular uptake, transfection efficiency, and cytotoxicity,
depend on their physicochemical properties including size,
compactness, and stability, which are closely associated
with the intensity of the electrostatic interactions between
the electrolytes (Fischer et al. 2004, 2003). The strong
electrostatic interactions of molecules with high charge
density and molecular weight usually generate densely
packed PECs, allowing successful intracellular delivery.
For example, plasmid DNA can form PECs with insuffi-
ciently charged cations such as low molecular weight linear
polyethyleneimine, while antisense ODN and siRNAs
cannot form nanoparticles under the same conditions.
Accordingly, one of the major challenges in the design of
H. Yoo � H. Mok (&)
Department of Bioscience and Biotechnology, Konkuk
University, Seoul 143-701, Republic of Korea
e-mail: [email protected]
123
Arch. Pharm. Res.
DOI 10.1007/s12272-014-0359-8
peptide-based carriers is caused by their lower molecular
weight and poorer spatial charge density compared to those
of high molecular synthetic/natural polymers and lipids,
which hinders firmly compacted complexation with nucleic
acids. Loosely fabricated PECs can be easily dissociated by
competitive molecules, limiting their intracellular delivery
and potential in vivo applications. Thus, the development
of novel strategies for the design of peptide-based stable
PECs that do not elicit cytotoxicity is highly desirable.
Recently, functional peptides have been linked via chem-
ical bonds to generate oligomeric peptides with reducible
linkages. This approach appears efficient, as the peptides
were found to provide efficient delivery of genes into cells
and facilitate appropriate biological activity in vitro and
in vivo without noticeable cytotoxicity, compared to
common peptides (Kiselev et al. 2013; Mok and Park 2008;
Won et al. 2011). It is conceivable that oligomeric peptides
might interact and be complexed with genes via strong
ionic interactions in the extracellular space, while allowing
easy release of incorporated genes for biological process-
ing in the reductive cytoplasm, due to the dissociation of
reducible linkages.
As an alternative approach, the structure of nucleic acids
can be modified to facilitate optimal ionic interactions with
peptide carriers. In our previous study, siRNAs were
multimerized via chemical conjugation, which has the
potential to significantly improve their binding affinity to
cationic polymers and the extent of intracellular delivery
(Lee et al. 2012; Mok et al. 2010). Here, we present a
comparative evaluation of multi-siRNA conjugates and
common monomeric siRNAs for use as peptide-based
carrier systems, in terms of particle formulation, intracel-
lular delivery, and gene suppression of siRNAs. In this
study, a natural and arginine-rich peptide, a protamine, was
selected for the condensation of siRNAs. Protamine-based
siRNA complexes were characterized by gel electropho-
resis and dynamic light scattering (DLS). The extent of
intracellular delivery of siRNAs/protamine complexes was
visualized using confocal microscopy. In addition, bio-
logical activities, including target gene suppression and
cell viability of peptide-based particles, were assessed
quantitatively using anti-green fluorescence protein (GFP)
siRNAs for stably GFP-expressing MDA-MB-435 cells.
Materials and methods
Materials
Conventional siRNAs and modified siRNAs with a thiol-
group at the distal 30 end were purchased from Bioneer Co.
(Daejeon, Republic of Korea). The siRNA sequences were as
follows: GFP sense strand siRNA, 50-GCAAGCUGACC
CUGAAGUUdTdT-30; antisense strand siRNA, 50-AACUUCAGGGUCAGCUUGCdTdT-30 (Mok et al. 2010).
Protamine, diethylpyrocarbonate (DEPC), heparin (MW:
12 kDa), and chloroquine were purchased from Sigma (St.
Louis, MO). KALA peptide (WEAKLAKALAKALAKHL
AKALAKALKACEA) was purchased from Peptron Inc.
(Daejeon, South Korea). POPOTM-3 iodide was purchased
from Invitrogen (Carlsbad, CA). Dulbecco’s Modified Eagle
Medium (DMEM) medium, penicillin/streptomycin (P/S),
and fetal bovine serum (FBS) were obtained from Gibco
BRL (Grand Island, NY). Cell Counting Kit-8 (CCK-8) was
purchased from Dojindo Laboratories (Kumamoto, Japan).
All other chemicals and reagents were of analytical grade.
Preparation of multi-siRNA
Multi-siRNAs were prepared as described in our previous
study, with slight modifications (Mok et al. 2010). Briefly,
free thiol groups were generated at the 30 end of sense and
antisense single strand siRNAs (25 nmol) by overnight
incubation with a reducing agent, 2 M dithiothreitol (DTT)
solution, at pH 8.0. Following the deprotection process, the
reactant was purified three times with a desalting column
(MWCO 7 k) to remove excess DTT and then dried using a
speed-vac. The resulting sense and antisense single-strand
siRNAs with free thiol groups were dissolved in 25 lL of
PBS solution and reacted with dithiobismaleimidoethane
(DTME, 50 nmol) overnight at room temperature with stir-
ring (850 rpm). The resulting dimeric sense and antisense
single strands were hybridized together via hydrogen bond-
ing, resulting in multi-siRNAs. The multi-siRNAs and
common mono-siRNAs (1 lg) were loaded onto 1 % aga-
rose gels and 15 % polyacrylamide gels for 45 min of gel
electrophoresis at 180 V. The siRNAs in the gels were
stained with ethidium bromide (EtBr) and visualized using a
UV-trans-illuminator. The resulting gel images were used
for quantitative analysis of multi-siRNAs using Image J
software (National Institute of Health, USA; http://rsb.info.
nih.gov/ij/) according to previous study (Mok et al. 2010).
Preparation of siRNA/protamine complexes
To prepare PECs, 1 lg of mono- and multi-siRNAs in
DEPC-treated deionized water (DEPC-DW) was mixed
with predetermined amounts of protamine and KALA
peptides by pipetting at weight ratios of 0, 0.1, 0.5, 1, and 2
at room temperature and incubated for 25 min. The PECs
prepared were loaded onto 15 % acrylamide gels and gel
electrophoresis was performed for 45 min. Migration of
each RNA was visualized using a UV trans-illuminator
after EtBr staining.
H. Yoo, H. Mok
123
For the competition assay, varying amounts of heparin
(MW: 17,000–19,000) were added to each PEC (prot-
amine/siRNA weight ratio = 2) at heparin/RNA weight
ratios of 0, 1, 2, 5, and 10 for 30 min. The free siRNAs
released from PECs into the solutions were examined by
polyacrylamide gel electrophoresis.
To prepare PECs, each RNA (10 lg) in DEPC-DW was
complexed with protamine (20 lg) for 25 min at room
temperature. The hydrodynamic sizes of the PECs con-
taining mono- and multi-siRNAs were determined by DLS
(ZEN 3690, Malvern Instruments Ltd., Malvern, UK).
Intracellular uptake of siRNA/protamine complexes
Donated human breast cancer MDA-MB-435 cells stably
expressing GFP (MDA-MB-GFP) were maintained in
DMEM supplemented with 10 % FBS, 100 units/mL
penicillin, and 100 lg/mL streptomycin at 37 �C in a
humidified atmosphere of 5 % CO2. Cells were plated on
4-well chamber slides at a density of 2 9 105 cells/well for
24 h prior to transfection. To stain RNA, 3 lL of POPOTM-
3 iodide dyes (1 mM) was incubated with the RNA (10 lg)
for 1 h at room temperature. After intercalation, POPO-3-
labeled siRNAs were purified by ethanol precipitation.
After dissolving POPO-3-labeled siRNA in DEPC-DW, the
concentration of siRNA in solution was measured using a
Nanodrop spectrophotometer (Thermo Scientific, Wil-
mington, DE). Labeled mono- and multi- siRNAs (1 lg)
were mixed with protamine (12 lg) for 25 min and then
added to each well of a chamber slide. After 4 h of incu-
bation, cells were washed three times with fresh PBS
solution at room temperature and fixed with 3.7 % form-
aldehyde solution in PBS at 48C. Cells were visualized
using confocal microscopy (FV-1000 spectral, Olympus,
Japan).
Cell viability assay
MDA-MB-GFP cells were plated on 96-well plates at a
density of 5 9 103 cells/well for 24 h prior to transfection.
Branched PEI (MW 25 k), linear PEI (MW 25 k), and
protamine were administered at predetermined polymer
concentrations in 10 % serum-containing medium for 5 h.
After replacing the medium with fresh 10 % serum media,
cells were incubated for a further 24 h before cell viability
was assessed by CCK-8 assay, according to the manufac-
turers’ instructions.
To assess the cytotoxicity of the siRNA/protamine
complexes, two types of siRNAs were mixed with prot-
amine at weight ratios of 0, 3, 6, and 12 for 25 min. The
formulated siRNA/protamine PECs were added to the cells
at an siRNA concentration of 290 nM in 6 % serum-con-
taining medium and the mixtures were incubated for 5 h.
Next, the medium was replaced and cells were incubated
for a further 24 h. Cell viability was assessed using the
CCK-8 assay according to manufacturer’s protocol.
Gene inhibition assay
Cells were seeded on 24-well plates at a density of 5 9 104
cells/well for 24 h prior to transfection. The siRNA/prot-
amine complexes were administered to cells at an siRNA
concentration of 290 nM in 6 % serum-containing medium
with and without chloroquine (50 lM) and incubated for
5 h. The medium was replaced with fresh 10 % serum-
containing medium and cells were incubated for a further
2 days. To obtain cell lysates, cells were treated with PBS
solution with 1 % Triton X-100 and centrifuged to remove
cell debris. The amount of GFP expression was measured
using a spectrofluorophotometer (Molecular Devices,
Sunnyvale, CA) at excitation and emission wavelengths of
480 and 520 nm, respectively. To observe GFP gene
expression level, cells were seeded on 4-well chamber slide
at a density of 5 9 104 cells/well. Next day, The multi-
siRNA/protamine PECs were transfected to cells (siRNA
concentration of 290 nM) in 6 % serum-containing med-
ium with and without chloroquine (50 lM) and incubated
for 5 h. The medium was replaced with fresh 10 % serum-
containing medium and cells were incubated for a further
2 days. Cells were washed with PBS two times and treated
with 3.7 % formaldehyde solution in PBS for fixation. The
cells were visualized using confocal microscopy.
Results
Formulation of protamine/multi-siRNA PECs
siRNAs that had been thiol-functionalized at both 30-ends
were chemically conjugated alone to form multimeric cross-
linked siRNAs conjugates via disulfide bonds, using similar
methods published in a previous study (Mok et al. 2010). The
prepared multi-siRNAs were examined by gel electropho-
resis using both agarose and acrylamide gels, as shown in
Fig. 1a. As expected, the multi-siRNAs showed obviously
retarded mobility in both agarose and acrylamide gels
because their molecular weight was higher than that of
mono-siRNAs. However, the decreased mobility could be
fully recovered in the presence of the reducing agent, DTT,
because of cleavage of internal disulfide linkages in multi-
meric siRNAs, as shown in our previous study (Mok et al.
2010). The difference in gel mobility for common siRNAs
and multimeric siRNAs was much greater in polyacrylamide
Evaluation of multimeric siRNA conjugates for breast cancer cells
123
gels than in agarose gels. It is well known that the pore size is
larger in 1 % agarose gels ([360 nm) than acrylamide gels
(*70–130 nm), which may result in a difference in resolu-
tion between the two gel types (Heuer et al. 2003; Pernodet
et al. 1997). Using gel images, the conjugation yield of
multimeric siRNAs was quantitatively analyzed using the
Image J program. Approximately 80 % of thiol-modified
siRNAs were successfully connected via disulfide bonds.
As potential peptide carriers, two types of peptides
were assessed in terms of complexation properties with
RNAs via ionic interactions. Protamine, a natural cationic
peptide with a molecular weight of *4 kDa, is a well-
known DNA-condensing peptide with membrane-translo-
cating ability (Brewer et al. 1999; Reynolds et al. 2005).
In addition, protamine is also clinically available peptide
as a heparin-neutralizing agent (Makris et al. 2000).
KALA peptide (MW: 3130) is a cationic fusogenic pep-
tide that allows pH-dependent membrane destabilization
for efficient intracellular gene delivery (Mok and Park
2008; Wyman et al. 1997). Using two kinds of functional
peptides, the affinity of peptides to siRNAs was com-
paratively evaluated via a gel retardation assay after
incubation of KALA and protamine with two types of
siRNAs, as shown in Fig. 1b, c. Interestingly, despite the
similarity in molecular weight, protamine’s binding
capacity with both mono- and multi-siRNAs was superior
to that of KALA. More than half of the common siRNAs
remained free at a KALA/siRNA weight ratio of 2, which
indicates that PECs were not produced under those con-
ditions. However, siRNAs successfully interacted and
condensed with protamine peptides at a protamine/siRNA
weight ratio of 2, and no free siRNA was observed in the
gel. It should be noted that more than 60 % of protamine
is composed of arginine, while 23.3 % of KALA peptides
are cationic lysines (of the total 30 amino acids, 7 are
lysines). This suggests that the relatively small portion of
cationic amino acids in KALA peptides could provide
different affinity with siRNAs to protamine. Thus, in this
study, protamine was selected as a carrier peptide due to
its high density of cationic amino acids per single peptide
and favorable condensing capability with siRNAs. In
addition, two types of siRNAs, mono- and multi-siRNA,
were comparatively evaluated for complexation with
carrier peptides. Figure 1c shows that multi-siRNAs were
completely complexed with protamine and no free multi-
siRNAs remained at a protamine/siRNA weight ratio of 1,
while mono- siRNAs remained free under the same con-
ditions. This result indicates that multi-siRNA structures
allow much more improved condensation with cationic
peptides than conventional siRNA structures, probably
because of their high spatial charge density and flexible
internal spacer (Lee et al. 2012).
Characterization of protamine/multi-siRNA PECs
To assess whether multi-siRNAs can form PECs with
protamines firmly, particle size and stability were exam-
ined, as shown in Fig. 2. Particle sizes of protamine/siRNA
PECs were measured using DLS (Fig. 2a). The sizes of the
PECs that common mono- and multi-siRNA formed with
protamines were 511.2 ± 313.2 and 119.3 ± 66.8 nm,
respectively. The multi-siRNA PECs were much smaller in
diameter (*4.3-fold) than those formed with mono-siR-
NAs, probably due to strong ionic interaction and com-
paction with protamine. Particle stability was investigated
by performing gel electrophoresis after incubation of the
competitive anionic polymer, heparin, with protamine
PECs (Fig. 2b). After completion of interactions between
siRNAs and protamine at a weight ratio of 2, different
amounts of heparin were administered to determine the
minimum amounts of heparin required for dissociation of
siRNA/protamine complexes. The release of free siRNAs
from siRNA/protamine complexes was observed with an
increasing ratio of heparin to siRNA. Figure 2b shows that
a fivefold greater concentration of heparin was needed for
decomplexation of multi-siRNA/protamine particles than
for that of mono-siRNA/protamine particles.
a b c
Fig. 1 a Gel electrophoresis of common and multimeric siRNAs
using (left panel) 1 % agarose gel and (right panel) 15 % acrylamide
gel. b–c Gel retardation assays after incubation of two kinds of
siRNAs (common siRNA and multimeric siRNA) with peptide
carriers at various peptide/siRNA weight ratios using b KALA and
c protamine
H. Yoo, H. Mok
123
Intracellular uptake of protamine/multi-siRNA PECs
To compare the extent of intracellular delivery of fabri-
cated PECs, two types of siRNAs with protamine were
administered to MDA-MB-GFP cells after fluorescence
labeling of siRNAs with POPO-3 and were visualized by
confocal microscopy (Fig. 3). Because free POPO-3 was
completely removed during the ethanol precipitation pro-
cess, background fluorescence signal was negligible when
cells were treated with dye-labeled siRNAs alone. How-
ever, strong red fluorescence was observed in cells treated
with multi-siRNA/protamine PECs due to the excellent
intracellular uptake, while cells incubated with mono-siR-
NA PECs had much weaker fluorescence intensity, as
shown in Fig. 3. This result indicates that mono-/protamine
complexes were taken up less efficiently than multi-/prot-
amine complexes, which may be attributed to their large
size and relative instability.
Biocompatibility of protamine/multi-siRNA PECs
To determine whether protamines are biocompatible in cells,
MDA-MB-GFP cells were treated with various concentra-
tions of protamines and cell viability was evaluated using a
CCK-8 assay (Fig. 4a). In this experiment, two well-known
cationic polymers for gene delivery, branched PEI (bPEI)
and liner PEI (LPEI), were also administered to cells for
comparative evaluation of their biocompatibility. The rela-
tive cell viabilities after treatment with bPEI and LPEI at a
concentration of 80 lg/mL were 8.6 ± 0.2 and
14.7 ± 0.1 %, respectively, indicating severe cytotoxicity.
However, treatment with protamine produced a significantly
lower cytotoxic effect. In addition, cell viability was exam-
ined using protamine PECs with two types of siRNAs using
mono- and multi-PECs at various protamine/siRNA weight
ratios (Fig. 4b). Interestingly, only mono-siRNA based
PECs showed obvious cytotoxicity at a protamine/siRNA
weight ratio of 12. The relative cell viabilities of cells treated
with common siRNA PECs were 78.2 ± 7.3 %. Consider-
ing that protamine/siRNA complexes prepared using the
conventional formulation process, with a size of over
500 nm, resulted in*80 % of the cell viability observed in a
a bFig. 2 a Diameter of
protamine/siRNA PECs at a
peptide/siRNA weight ratio of 2
in DW. b Competition assay for
protamine/siRNA PECs in the
presence of varying amounts of
heparin
Fig. 3 Confocal microscopic images of intracellular siRNAs after
complexation with protamine in MDA-MB-435 cells. siRNAs were
stained with the red fluorescence dye POPO-3
Evaluation of multimeric siRNA conjugates for breast cancer cells
123
previous study, this result appears consistent (Kundu et al.
2012). The observed pattern may be attributed to the fact that
free protamines that could not participate in complexation
with siRNAs elicit cell toxicity because of the poor binding
affinity between common siRNAs and protamines.
Gene silencing in GFP expressing MDA-MB-435 cells
Using multi-siRNA/protamine PECs with more improved
biocompatibility, the extent of gene suppression after
treatment was quantitatively evaluated in Fig. 5. Unex-
pectedly, multi-siRNA/protamine PECs showed negligible
GFP gene inhibition under serum conditions, despite their
excellent intracellular delivery. In previous studies, endo-
somal escape and intracellular uptake have been considered
crucial determinants for successful biological activity of
siRNAs after transfection (Nguyen and Szoka 2012; Tseng
et al. 2009). Thus, chloroquine (CQ), a chemical agent that
enables endosomal escape, was added to the media with
siRNA/protamine complexes, and gene suppression was
examined. The extent of GFP gene expression after treat-
ment with multi-siRNA/protamine complexes at a prot-
amine/siRNA weight ratio of 12 was 97.8 ± 9.3 and
67.1 ± 6.3 % in the absence and presence of 50 lM of
CQ, respectively, for 5 h. This result shows that addition of
the endosomal escape moiety resulted in successful deliv-
ery of protamine/multi-siRNA complexes and induction of
notable gene inhibition without cytotoxicity to the MDA-
MB-435 cells. However, incubation of PECs with CQ for
12 h was too toxic to evaluate gene suppression. The GFP
gene suppression by multi-siRNA/protamine complexes
was also observed by confocal microscopy. Figure 5b
shows that multi-siRNA/protamine complexes successfully
inhibited target GFP gene expression in the presence of
CQ.
50
60
70
80
90
100
110
120
Weight ratios (protamine/siRNA)
Cel
l via
bili
ty (
%)
0 20 40 60 80 100 120 140 1600
20
40
60
80
100
Carrier conc. (µg/mL)
Cel
l via
bili
ty (
%)
a
b
Multi
Mono
bPEILPEIprotamine
0 3 6 12
n.s.
Fig. 4 Cell viability after incubation with a varying amounts of
cationic polymers and b protamine/siRNA complexes for MDA-MB-
435 cells (*p \ 0.05)
a
b
Fig. 5 a The extent of GFP gene suppression by multi-siRNA/
protamine PECs with and without CQ (50 lM) in 10 % serum-
containing medium for GFP-expressing MDA-MB-435 cells. b Con-
focal microscopy images of GFP-expressing MDA-MB-435 cells
after treatment of multi-siRNA/protamine PECs with and without CQ
(50 lM)
H. Yoo, H. Mok
123
Discussion
Currently, protamine has received attention as a promising
material for formulation of nucleic acid-based drugs
in vitro and in vivo because of a relatively low price
compared to synthetic functional peptides, clinical avail-
ability, efficient translocation through cellular membranes,
and high affinity to nucleic acids (Choi et al. 2010; Kundu
et al. 2012). In this study, we evaluated multi-siRNA-based
ionic complexes with protamine as a new carrier for ther-
apeutic siRNAs. Our results exhibited that multi-siRNA
structures are superior to common siRNA structures for the
formulation and efficient intracellular uptake of protamine-
based PECs. Figure 2a shows that biocompatible prot-
amine formed small compact nanoparticles with multi-
siRNAs, with a size of 120 nm. Considering that particles
smaller than 200 nm possess great advantages in terms of
intracellular endocytosis in vitro and passively targeted
delivery in vivo via the enhanced permeability and reten-
tion (EPR) effect, peptide formulation using multimeric
siRNAs appears to be a promising strategy for efficient
siRNA delivery (Decuzzi et al. 2009). In addition, Fig. 2b
shows that multi-siRNA-based ionic complexes with
protamine were stable against exterior competitive poly-
electrolytes, while mono-siRNA/protamine complexes
were only loosely formed. Multi-siRNAs/protamine PECs
were not easily dissociated by anionic molecules probably
due to their strong ionic interactions. In addition, it was
also demonstrated that protamine-based multi-siRNA PECs
with a narrow size distribution and firm compaction pro-
vide high intracellular uptake as well as excellent target
gene inhibition using anti-GFP siRNAs. Notably, multi-
siRNA/protamine PECs showed excellent gene suppression
without cycotoxicity, which may be favorable for in vivo
applications. It should be also noticed that all transfections
were performed in the presence of serum proteins to con-
sider nonspecific interference of intracellular delivery by
serum proteins in vivo. In our previous study, multi-siR-
NAs showed superior condensation and delivery efficiency
with synthetic polymeric carriers, LPEIs, which had a low
charge. This study clearly demonstrated that clinically
available natural peptide protamine that pose less safety
concerns could replace high molecular weight cationic
polymers like LPEIs (25 k). However, for applying the
current protamine-based multi-siRNA delivery system
in vivo, further studies will be necessary to optimize
protamine carriers with endosomal escape moieties.
Conclusion
In conclusion, to our knowledge, this is the first study to
report that multi-siRNAs are favorable for incorporation in
peptide carriers and subsequent intracellular delivery
in vitro. Fabricated multi-siRNA/protamine PECs with a
size of 120 nm showed greatly improved intracellular
uptake and biocompatibility, compared to conventional
siRNA/protamine particles. In addition, the multi-siRNA/
protamine particles effectively suppressed target gene
expression in the presence of serum proteins and CQ
without cytotoxicity for the MDA-MB-435 breast cancer
cells. Thus, a serious issue in peptide-siRNA particle for-
mulation, that is, the poor binding affinity of siRNAs to
cationic peptides, could be overcome by using multi-siR-
NA conjugates, thereby providing a potential platform
technology for the design of peptide-based siRNA delivery
systems for in vivo applications.
Acknowledgments This study was supported by a grant from the
National R&D Program for Cancer Control, Ministry for Health and
Welfare, Republic of Korea (1220050).
References
Brewer, L.R., M. Corzett, and R. Balhorn. 1999. Protamine-induced
condensation and decondensation of the same DNA molecule.
Science 286: 120–123.
Choi, Y.S., et al. 2010. The systemic delivery of siRNAs by a cell
penetrating peptide, low molecular weight protamine. Biomate-
rials 31: 1429–1443.
Decuzzi, P., et al. 2009. Intravascular delivery of particulate systems:
does geometry really matter? Pharmaceutical Research 26:
235–243.
Fischer, D., et al. 2004. Poly(diallyldimethylammonium chlorides)
and their N-methyl-N-vinylacetamide copolymer-based DNA-
polyplexes: role of molecular weight and charge density in
complex formation, stability, and in vitro activity. International
Journal of Pharmaceutics 280: 253–269.
Fischer, D., et al. 2003. In vitro cytotoxicity testing of polycations:
influence of polymer structure on cell viability and hemolysis.
Biomaterials 24: 1121–1131.
Heuer, D.M., S. Saha, and L.A. Archer. 2003. Topological effects on
the electrophoretic mobility of rigid rodlike DNA in polyacryl-
amide gels. Biopolymers 70: 471–481.
Huang, Y., et al. 2013. Curb challenges of the ‘‘Trojan Horse’’
approach: smart strategies in achieving effective yet safe cell-
penetrating peptide-based drug delivery. Advanced drug delivery
reviews 65: 1299–1315.
Kim, W.J., and S.W. Kim. 2009. Efficient siRNA delivery with non-
viral polymeric vehicles. Pharmaceutical Research 26: 657–666.
Kiselev, A., et al. 2013. Characterization of reducible peptide
oligomers as carriers for gene delivery. International Journal
of Pharmaceutics 441: 736–747.
Kumar, P., et al. 2008. T cell-specific siRNA delivery suppresses
HIV-1 infection in humanized mice. Cell 134: 577–586.
Kundu, A.K., et al. 2012. Stability of lyophilized siRNA nanosome
formulations. International Journal of Pharmaceutics 423: 525–534.
Lee, S.H., et al. 2012. Small-interfering RNA (siRNA)-based
functional micro- and nanostructures for efficient and selective
gene silencing. Accounts of Chemical Research 45: 1014–1025.
Makris, M., R.E. Hough, and S. Kitchen. 2000. Poor reversal of low
molecular weight heparin by protamine. British Journal of
Haematology 108: 884–885.
Evaluation of multimeric siRNA conjugates for breast cancer cells
123
Meade, B.R., and S.F. Dowdy. 2007. Exogenous siRNA delivery
using peptide transduction domains/cell penetrating peptides.
Advanced Drug Delivery Reviews 59: 134–140.
Mok, H., et al. 2010. Multimeric small interfering ribonucleic acid for
highly efficient sequence-specific gene silencing. Nature Mate-
rials 9: 272–278.
Mok, H., and T.G. Park. 2008. Self-crosslinked and reducible
fusogenic peptides for intracellular delivery of siRNA. Biopoly-
mers 89: 881–888.
Nguyen, J., and F.C. Szoka. 2012. Nucleic acid delivery: the missing
pieces of the puzzle? Accounts of Chemical Research 45:
1153–1162.
Pernodet, N., M. Maaloum, and B. Tinland. 1997. Pore size of agarose
gels by atomic force microscopy. Electrophoresis 18: 55–58.
Reynolds, F., R. Weissleder, and L. Josephson. 2005. Protamine as an
efficient membrane-translocating peptide. Bioconjugate Chem-
istry 16: 1240–1245.
Scholz, C., and E. Wagner. 2012. Therapeutic plasmid DNA versus
siRNA delivery: common and different tasks for synthetic
carriers. Journal of Controlled Release 161: 554–565.
Tseng, Y.C., S. Mozumdar, and L. Huang. 2009. Lipid-based
systemic delivery of siRNA. Advanced Drug Delivery Reviews
61: 721–731.
Won, Y.W., et al. 2011. Poly(oligo-D-arginine) With Internal
Disulfide Linkages as a Cytoplasm-sensitive Carrier for siRNA
Delivery. Molecular Therapy 19: 372–380.
Wyman, T.B., et al. 1997. Design, synthesis, and characterization of a
cationic peptide that binds to nucleic acids and permeabilizes
bilayers. Biochemistry 36: 3008–3017.
Yewale, C., et al. 2013. Proteins: emerging carrier for delivery of
cancer therapeutics. Expert Opinion on Drug Delivery 10:
1429–1448.
H. Yoo, H. Mok
123