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Fatty acid metabolism in barramundi ( Lates calcarifer) By Mr Michael J. Salini BSc (Hons) Submitted in fulfilment of the requirements for the degree of Doctor of Philosophy Deakin University April, 2016
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Fatty acid metabolism in barramundi (Lates calcarifer)

By

Mr Michael J. Salini

BSc (Hons)

Submitted in fulfilment of the requirements for the degree of

Doctor of Philosophy

Deakin University

April, 2016

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parisr
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parisr
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Acknowledgements I’m going to keep this short because there are another ~200 pages after this one.

However, there are a few people that I need to mention for their support and

encouragement along the way. Firstly, I need to say that the most important person

that has supported and put up with me throughout this process is my wife Gaëlle. Je

ne sais pas comment tu as fait. Merci pour tout ton soutien pendant ces années très

difficiles et parfois compliquées. Je ne l’oublierai jamais Also, many thanks to my

family and Gaelle’s family for supporting both of us during my candidature.

During my PhD experience I enjoyed supervision by arguably two of the world’s

best fish nutritionists. This is something that I am proud of and constantly grateful

for. Their knowledge, expertise and professionalism have helped me to develop the

set of skills I wanted and worked hard for. I don’t need to say anything else about

Brett and Gio as their reputation precedes them everywhere in every aspect of their

lives. Thanks guys. I would like to thank the CSIRO Agriculture for supporting this

PhD both in-kind and through the PhD Top up scholarship award.

I would like to acknowledge all of my friends, family, colleagues and peers at the

CSIRO labs (formally at Cleveland then Ecoscience precinct and hopefully finally at

the Queensland Biosciences Precinct). These include among others: Bruno Araújo

(Brazil), Nick Bourne, Susan Cheers, Mat Cook, Jake Goodall, Nigel Preston and

Nick Wade.

Additionally, I would also like to acknowledge all of my friends, colleagues and

peers at the shared CSIRO and DAF research centre on Bribie Island (BIRC). These

people have helped me along in my aquaculture journey since 2003 and their

contributions are as varied as they are valued. These names are only a short list and

apologies for those who I have missed: Stuart Arnold, David Blyth, Natalie Habilay,

Simon Irvin, Nick Polymeris, Dylan Rylatt, Kinam Salee, Hazra Thaggard, Richard

Thaggard, Trevor Borchert, Leanda Maunder and David Poppi.

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Publications

Salini, M.J., Irvin, S.J., Bourne, N., Blyth, D., Cheers, S., Habilay, N., Glencross, B.D., 2015. Marginal efficiencies of long chain-polyunsaturated fatty acid use by barramundi (Lates calcarifer) when fed diets with varying blends of fish oil and poultry fat. Aquaculture. 449, 48-57.

Salini, M.J., Turchini, G.M., Glencross, B.G., 2015. Effect of dietary saturated and

monounsaturated fatty acids in juvenile barramundi Lates calcarifer. Aquac. Nutr. DOI:10.1111/anu.12389.

Salini, M.J., Wade, N.M., Bourne, N., Turchini, G.M., Glencross, B.D., 2016. The

effect of marine and non-marine phospholipid rich oils when fed to juvenile barramundi (Lates calcarifer). Aquaculture. 455, 125-135.

Salini, M.J., Turchini, G.M., Wade, N., Glencross, B.D., 2015. Rapid effects of

essential fatty acid deficiency on growth and development parameters and transcription of key fatty acid metabolism genes in juvenile barramundi Lates calcarifer. Br. J. Nutr. 114, 1784-1796.

Salini, M.J., Wade, N.M., Araújo, B.C., Turchini, G.M., Glencross, B.D., 2016. Eicosapentaenoic acid, arachidonic acid and eicosanoid metabolism in juvenile barramundi Lates calcarifer. Lipids. 51(8), 973-988

Salini, M.J., Poppi, D.A., Turchini, G.M., Glencross, B.D., 2016. Defining the

allometric relationship between size and nutrient turnover in barramundi Lates calcarifer. Comp. Biochem. Physiol. Part A Mol. Integr. Physiol. 201, 79-86.

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Abstract The thesis presented herein is an adaptation of a series of published manuscripts. The

manuscripts have been peer reviewed and published in high standing journals

relevant to the field of aquaculture nutrition. The aims of the research were designed

to generate a thorough understanding of lipid metabolism in the barramundi (Lates

calcarifer); extending from a more general applied approach through to a complex

understanding of molecular mechanisms and lipid bioenergetics.

In the first experiment, a series of five diets with blends of fish (anchovy) oil and

poultry fat (F100:P0, F60:P40, F30:P70, F15:P85, F0:P100) were fed to 208 ± 4.1 g

barramundi over a 12-week period. The replacement of fish oil (FO) with poultry fat

had no impact on growth performance (average final weight of 548.3 ± 10.2 g) or

feed conversion (mean = 1.14 ± 0.02). Analysis of the whole body composition

showed that the fatty acid profile reflected that of the fed diet. However, it was also

shown that there was a disproportional retention of some fatty acids relative to others

(notably 18:2n-6 and 18:3n-3). By examining the body mass independent retention of

different fatty acids with differential levels of intake of each, the marginal

efficiencies were able to be determined. The differential retention of fatty acids in the

meat was also examined allowing the determination of oil blending strategies to

optimise meat n-3 long chain – polyunsaturated fatty acid (LC-PUFA) levels.

In the second experiment, the response of juvenile barramundi (47.0 g/fish initial

weight) fed isolipidic and isoenergetic diets with 8.2% added oil was tested. The

experimental test diets were a 2:1 or 1:2 ratio of saturated to monounsaturated fatty

acids (SFA-D and MUFA-D respectively) compared to a control diet (CTRL-D) fed

for eight weeks. The diets containing mostly olive oil (diet MUFA-D) and mostly

refined palm oil (diet SFA-D) did not impact the growth performance or feed

utilisation parameters of the barramundi. The in vivo beta-oxidation activity was

consistent with the diet fatty acid composition with the most dominant fatty acids

being heavily beta-oxidised. Together, the in vivo whole body mass-balance of fatty

acids showed that n-3 long chain polyunsaturated fatty acids (LC-PUFA) were most

efficiently utilised in the SFA-D and MUFA-D fed fish. This study provides

evidence that additional dietary MUFA and SFA are suitable fatty acid classes for

juvenile barramundi and they are both equally efficient at sparing LC-PUFA from an

oxidative fate.

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In the third experiment, the response of juvenile barramundi to four diets containing

either marine- or non-marine derived neutral lipid (NL) or polar lipid (PL) sources

was assessed for eight weeks in a 2x2 factorial design. The four diets contained 8.2%

added lipid composed of a 1% fish oil base with 7.2 % test lipid (n-3 NL: Fish oil, n-

3 PL: Krill oil, n-6 NL: Soybean oil, n-6 PL: Soybean lecithin). The results

demonstrated that the different lipid sources (either n-3 or n-6 omega series from

either NL or PL class) had significant effects on growth performance and feed

utilisation with some interaction terms noted. Growth was negatively affected in the

n-6 NL fish and the feed conversion ratio was highest in the n-6 PL fish. Digestibility

of total lipid and some specific fatty acids (notably 18:2n-6 and 18:3n-3) were also

negatively affected in the n-6 PL fish. Analysis of the whole body NL fatty acid

composition showed that these mirrored those of the diets and significant interaction

terms were noted. However, the whole body PL fatty acids appeared to be more

tightly regulated in comparison. The blood plasma biochemistry and hepatic

transcription of several fatty acid metabolism genes in the n-6 PL fed and to a lesser

extent in the n-6 NL fed fish demonstrated a pattern consistent with modified

metabolic function. These results support that there are potential advantages in using

phospholipid-rich oils, however, there are clear differences in terms of their origin.

In the fourth experiment, the essential fatty acid requirement (EFA) of juvenile

barramundi (47.0 g/fish initial weight) fed isolipidic and isoenergetic diets with 8.2%

added oil was tested. The experimental test diets were either devoid of FO, and thus

with no n-3 LC-PUFA (FO FREE diet) or with a low inclusion of FO (FO LOW

diet). These were compared against a control diet containing only FO (FO CTRL

diet) as the added lipid source, over an eight week period. Interim samples and

measurements were taken fortnightly during the trial in order to define the aetiology

of the onset and progression of EFA deficiency. After two weeks, the fish fed the FO

FREE and FO LOW diets had significantly lower live-weights and after eight weeks

significant differences were detected for all performance parameters. The fish fed the

FO FREE diet also had a significantly higher incidence of external abnormalities.

The transcription of several genes involved in fatty acid metabolism was affected

after two weeks of feeding, showing a rapid nutritional regulation. This experiment

documents the aetiology of the onset and the progression of EFA deficiency in

juvenile barramundi and demonstrates that such deficiencies can be detected within

two weeks.

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In the fifth experiment, barramundi (initial weight = 10.3 ± 0.03 g; mean ± S.D.) fed

one of five diets with graded levels of EPA (1, 5, 10, 15 and 20 g/kg) or one of four

diets with graded levels of ARA (1, 6, 12 and 18 g/kg) were compared against a

control diet containing fish oil. A six-week feeding trial demonstrated that the

addition of EPA or ARA did not impact growth performance or feed utilisation.

Analysis of the whole body fatty acids showed that these reflected those of the diets.

The ARA retention demonstrated an inversely related curvilinear response to either

EPA or ARA. The marginal utilisation efficiencies of EPA and ARA were higher

than expected (62.1 and 91.9% respectively) and a dietary ARA requirement was

defined (0.012 g/kg0.796/d) in juvenile barramundi. The partial cDNA sequences of

genes regulating eicosanoid biosynthesis were identified in barramundi tissues,

namely cyclooxygenase 1 (Lc COX1a, Lc COX1b), cyclooxygenase 2 (Lc COX2) and

lipoxygenase (Lc ALOX-5). Both Lc COX2 and Lc ALOX-5 expression in the liver

tissue were elevated in response to increasing dietary ARA, meanwhile expression

levels of Lc COX2 and the mitochondrial fatty acid oxidation gene Lc CPT1a were

elevated in the kidney. A low level of EPA increased the expression of Lc COX1b in

the liver. Consideration should be given to the EPA to ARA balance for juvenile

barramundi in light of the nutritionally inducible nature of the cyclooxygenase and

lipoxygenase enzymes.

A sixth and final experiment was conducted with barramundi to examine the

allometric scaling effect of individual fatty acids. Six treatment size classes of fish

were deprived of food for 21 days (Treatment A, 10.5 ± 0.13 g; Treatment B, 19.2 ±

0.11 g; Treatment C, 28.3 ± 0.05 g; Treatment D, 122.4 ± 0.10 g; Treatment E, 217.6

± 0.36 g; Treatment F, 443.7 ± 1.48 g; mean ± SD) with each treatment comprising

fifteen fish, in triplicate. The assessment of somatic losses of energy and lipid were

consistent with previous studies, validating the methodology to be extended to

individual fatty acids. Live-weight (LW) exponent values were determined to be

0.817 ± 0.010 for energy and 0.895 ± 0.007 for lipid. There were significant

differences among the fatty acids ranging from 0.687 ± 0.005 for 20:5n-3 and 0.954

± 0.008 for 18:1n-9. The LW exponent values were applied to existing fatty acid

intake and deposition data of barramundi fed with either 100% fish oil or 100%

poultry oil. From this the maintenance requirement for each fatty acid was

determined by extrapolation of the linear regression. The metabolic demands for

maintenance and growth were then iteratively determined for fish over a range of

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size classes. Application of these exponent values to varying levels of fatty acid

intake demonstrated that the biggest driver in the utilisation of fatty acids in this

species is deposition demand and despite their reputed importance, the long-chain

polyunsaturated fatty acids had nominal to no maintenance requirement.

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Contents

Acknowledgements ...................................................................................................... 3

Publications .................................................................................................................. 4

Abstract ........................................................................................................................ 5

List of tables ............................................................................................................... 13

List of figures ............................................................................................................. 17

List of acronyms ......................................................................................................... 20

General Introduction ................................................................................................... 21

1.1 Introduction ....................................................................................................... 21

1.2 The role of lipids in fish nutrition ..................................................................... 25

1.2.1 Lipid classes in fish tissues ........................................................................ 25

1.2.2 Fatty acid biochemical structure ................................................................ 25

1.2.3 Minimum and optimum lipid nutrition ...................................................... 26

1.2.4 Alternative oils ........................................................................................... 29

1.3 Barramundi aquaculture nutrition ..................................................................... 32

1.3.1 Macro nutrient requirements of barramundi .............................................. 32

1.3.2 Alternative oils for barramundi .................................................................. 33

1.3.3 Different fatty acid class use by barramundi ............................................. 34

1.3.4 Different lipid class use by barramundi ..................................................... 36

1.3.5 Essential fatty acids in barramundi ............................................................ 37

1.3.6 EPA, ARA and eicosanoid metabolism in barramundi .............................. 39

1.3.7 Allometric scaling effects of LC-PUFA .................................................... 40

1.4 Thesis structure ................................................................................................. 41

General methodology ................................................................................................. 42

2.1 Diet production ................................................................................................. 42

2.1.1 Ingredient preparation ................................................................................ 42

2.1.2 Diet preparation by screw press technology .............................................. 42

2.1.3 Diet preparation by extrusion technology .................................................. 42

2.1.4 Vacuum infusion of lipid ........................................................................... 43

2.2 Experimental methodology ............................................................................... 43

2.2 Ethical statement ........................................................................................... 43

2.3 Barramundi husbandry .................................................................................. 43

2.4 Sample collection techniques ........................................................................ 44

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2.5 Abnormalities and behaviour assessment ..................................................... 45

2.6.1 Digestibility analysis – settlement ............................................................. 45

2.6.2 Digestibility analysis - abdominal stripping .............................................. 46

2.7 Experimental analyses ...................................................................................... 46

2.7.1 Chemical analysis ...................................................................................... 46

2.8.1 Biochemical analysis – Lipid transesterification ....................................... 46

2.8.2 Biochemical analysis – Plasma chemistry ................................................. 47

2.9.1 Molecular analysis - Cloning of putative prostaglandin G/H synthase (COX) and arachidonate 5-lipoxygenase (LOX) genes ...................................... 48

2.9.2 Molecular analysis - Sequencing analysis ................................................. 48

2.9.3 Molecular analysis - RNA extraction and normalisation ........................... 49

2.9.4 Molecular analysis - Quantitative real time reverse transcription polymerase chain reaction (qRT-PCR) ............................................................... 49

2.10 Calculations ................................................................................................. 50

2.11 Statistical interpretation .............................................................................. 51

Experimental Chapters ............................................................................................... 53

3.0 Marginal efficiencies of long chain-polyunsaturated fatty acid use by

barramundi (Lates calcarifer) when fed diets with varying blends of fish oil and

poultry fat ................................................................................................................ 53

3.1 Aims .............................................................................................................. 56

3.2 Materials and Methods .................................................................................. 56

3.3 Results ........................................................................................................... 59

3.3.1. Growth performance and feed utilisation .................................................. 59

3.3.2. Nutrient marginal efficiencies ................................................................... 64

3.3.3. Fillet quality assessment ........................................................................... 64

3.4 Discussion ..................................................................................................... 68

4.0 Effect of dietary saturated and monounsaturated fatty acids in juvenile

barramundi Lates calcarifer ................................................................................... 74

4.1 Aims .............................................................................................................. 77

4.2 Materials and methods .................................................................................. 77

4.3 Results ........................................................................................................... 81

4.3.1 Growth and feed utilisation ........................................................................ 81

4.3.2 Biochemical analysis .................................................................................. 84

4.3.3 Mass-balance computations ....................................................................... 87

4.4 Discussion ..................................................................................................... 90

5.0 The effect of marine and non-marine phospholipid rich oils when fed to

juvenile barramundi (Lates calcarifer) ................................................................... 94

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5.1 Aims .............................................................................................................. 97

5.2 Materials and methods .................................................................................. 97

5.3 Results ......................................................................................................... 103

5.3.1 Growth and feed utilisation ...................................................................... 103

5.3.2 Biochemical analysis ................................................................................ 106

5.3.3 Gene expression ....................................................................................... 110

5.4 Discussion ................................................................................................... 113

6.0 Rapid effects of essential fatty acid deficiency on growth and development

parameters and transcription of key fatty acid metabolism genes in juvenile

barramundi Lates calcarifer ................................................................................. 118

6.1 Aims ............................................................................................................ 121

6.2 Materials and methods ................................................................................ 121

6.3 Results ......................................................................................................... 126

6.3.1 Growth and feed utilisation ...................................................................... 126

6.3.2 Biochemical analysis ................................................................................ 130

6.3.3 Clinical observations ................................................................................ 133

6.3.4 Sub-clinical parameters ............................................................................ 133

6.4 Discussion ................................................................................................... 137

7.0 Eicosapentaenoic acid, arachidonic acid and eicosanoid metabolism in juvenile

barramundi Lates calcarifer ................................................................................. 141

7.1 Aims ............................................................................................................ 144

7.2 Materials and methods ................................................................................ 144

7.3 Results ......................................................................................................... 150

7.3.1 Growth performance and feed utilisation ................................................. 150

7.3.2 Digestibility analysis of the diets ............................................................. 153

7.3.3 Whole-body composition. ........................................................................ 153

7.3.4 Fatty acid retention efficiency .................................................................. 157

7.3.5 Marginal utilisation efficiencies ............................................................... 157

7.3.6 Gene identification and quantitative expression ...................................... 162

7.4 Discussion ................................................................................................... 165

8.0 Defining the allometric relationship between size and nutrient turnover in

barramundi Lates calcarifer ................................................................................. 169

8.1 Aims ............................................................................................................ 172

8.2 Materials and methods ................................................................................ 172

8.3 Results ......................................................................................................... 172

8.3.1 Fish compositional changes ..................................................................... 172

8.3.2 Determination of metabolic live-weight exponents ................................. 179

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8.3.3 Metabolic demands for fatty acids ........................................................... 181

8.4 Discussion ................................................................................................... 186

Conclusions .............................................................................................................. 190

General conclusions ................................................................................................. 193

References ................................................................................................................ 195

Appendix - Supplementary figures ........................................................................... 212

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List of tables Table 1. 1 Current world production (MMT) and value (USD/tonne) data of major

and emerging food grade oils. .................................................................................... 29

Table 3. 1 Chemical composition of key ingredients. All data are g/kg DM unless

otherwise stated. Fatty acid data are expressed as a percentage of total fatty acids

(%). ............................................................................................................................. 57

Table 3. 2 Experimental diet formulation and composition. All data are g/kg DM

unless otherwise stated. Fatty acid data are expressed as a percentage of total fatty

acids (%). .................................................................................................................... 58

Table 3. 3 Growth, feed utilisation and nutrient deposition parameters. ................... 60

Table 3. 4 Whole body chemical composition of the experimental fish on a live-

weight basis. All data are g/kg unless otherwise stated. Fatty acid data are expressed

as a percentage of total fatty acids (%). ...................................................................... 62

Table 3. 5 Summary of marginal efficiencies of specific fatty acids by juvenile

barramundi when fed diets with varying blends of fish oil and poultry fat. .............. 65

Table 3. 6 Fillet (NQC) composition on a live-weight basis. All data are g/kg unless

otherwise stated. Fatty acid profiles of NQC samples from each treatment are

expressed as mg/100g meat. ....................................................................................... 66

Table 4. 1 Chemical composition of key ingredients, all values are presented as g/kg

DM unless otherwise stated. ....................................................................................... 78

Table 4. 2 Formulation and composition of experimental diets. All values are g/kg

DM unless otherwise stated. ....................................................................................... 79

Table 4. 3 Growth performance and feed utilisation of juvenile barramundi fed

experimental diets for eight weeks. All data (n=3 per treatment) are presented as

mean ± SEM. .............................................................................................................. 82

Table 4. 4 Apparent digestibility coefficients of macro nutrients and specific fatty

acids of experimental diets fed to juvenile barramundi. All data (n=3 per treatment)

are reported as apparent digestibility percentage (%) ................................................ 83

Table 4. 5 Whole body composition (n=3 per treatment, g/kg live basis). Whole body

and liver fatty acid data (n=3 per treatment, % total). ................................................ 85

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Table 4. 6 Whole-body fatty acid mass balance computations of β-oxidation,

elongation and desaturation activity of juvenile barramundi fed experimental diets

for eight weeks. All data (n=3 per treatment) are reported on a nmol/g fish/d basis. 88

Table 4. 7 Calculated summary of LC-PUFA flux in juvenile barramundi. All data

are (n=3) reported as a percentage based on the total intake of each fatty acid (nmol/g

fish/d). ......................................................................................................................... 89

Table 5. 1 Chemical composition of ingredients used in experimental diets, all values

are g/kg DM unless otherwise stated .......................................................................... 98

Table 5. 2 Formulation and composition (as analysed) of experimental diets, all

values are g/kg DM unless otherwise stated. ........................................................... 100

Table 5. 3 Neutral and polar lipid composition of experimental diets, all values are

mg/g lipid unless otherwise stated. ........................................................................... 101

Table 5. 4 Real time quantitative PCR primer pairs for fatty acid metabolism and

control genes ............................................................................................................. 102

Table 5. 5 Growth and feed utilisation parameters of juvenile barramundi fed

experimental diets for eight weeks. Data (n=3) are presented as mean ± SEM. ...... 104

Table 5. 6 Apparent digestibility (%) parameters of the diets fed to juvenile

barramundi. Data (n=3) are presented as mean ± SEM. .......................................... 105

Table 5. 7 Neutral and polar lipid composition in the whole body of juvenile

barramundi fed experimental diets. All values are mg/g lipid unless otherwise

stated. Data (n=3) are presented as mean ± SEM ..................................................... 107

Table 5. 8 Whole body fatty acid balance calculations of β-oxidation, elongation and

desaturation of juvenile barramundi fed experimental diets for eight weeks. All

values are presented as nmol/g fish/d. Data (n=3) are presented as mean ± SEM. .. 109

Table 5. 9 Plasma chemistry of barramundi fed experimental diets for eight weeks.

Data (n=3) are presented as mean ± SEM. ............................................................... 111

Table 6. 1 Chemical composition of ingredients used in experimental diets, all values

are g/kg unless otherwise stated. .............................................................................. 122

Table 6. 2 Formulation and composition of experimental diets, all values are g/kg

DM unless stated. ..................................................................................................... 124

Table 6. 3 Real-time qPCR primer pairs for target genes involved in fatty acid

metabolism. .............................................................................................................. 125

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Table 6. 4 Growth performance and feed utilisation of barramundi fed experimental

diets for eight weeks. ................................................................................................ 127

Table 6. 5 Split-plot analysis of variance for repeated measures design of growth

performance and feed utilisation parameters in juvenile barramundi. ..................... 128

Table 6. 6 Apparent digestibility of macro nutrients and fatty acids present in the

experimental diets. .................................................................................................... 129

Table 6. 7 Initial and final fatty acid composition of whole-body and liver tissue from

juvenile barramundi. All fatty acid data are presented as percentage of total fatty

acids (%) unless otherwise stated. ............................................................................ 131

Table 6. 8 Plasma chemistry parameters in juvenile barramundi fed experimental

diets, sampled fortnightly for eight weeks. .............................................................. 134

Table 6. 9 Split-plot analysis of variance for repeated measures design of plasma

chemistry parameters in juvenile barramundi. ......................................................... 135

Table 7. 1 Composition of key ingredients used in diet formulations (g/kg DM). Fatty

acids are presented as mole percentage (mole%). .................................................... 145

Table 7. 2 Formulation and composition of experimental diets (g/kg DM). Fatty acids

are presented as mole percentages (mole%). ............................................................ 146

Table 7. 3 Forward and reverse primer pairs (5ʹ – 3ʹ) used in the cloning of

eicosanoid metabolism genes in barramundi and real-time qPCR gene expression

analysis. .................................................................................................................... 148

Table 7. 4 Growth performance and feed utilisation of barramundi fed increasing

EPA analysed using polynomial contrasts. .............................................................. 151

Table 7. 5 Growth performance and feed utilisation of barramundi fed increasing

ARA analysed using polynomial contrasts. ............................................................. 152

Table 7. 6 Apparent digestibility (%) of nutrients and fatty acids in diets analysed by

one-way ANOVA. .................................................................................................... 155

Table 7. 7 Whole body and fatty acid composition of barramundi analysed by one-

way ANOVA (g/kg live-basis). Fatty acids are presented as mole percentages

(mole%). ................................................................................................................... 156

Table 7. 8 Retention efficiency of selected fatty acids in barramundi fed either

increasing EPA or ARA analysed by polynomial contrasts. .................................... 159

Table 7. 9 Summary of maintenance demand and utilisation efficiencies by

barramundi fed either increasing EPA or ARA. ....................................................... 161

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Table 8. 1. Performance parameters and chemical composition for initial and final

barramundi of varying sizes. Data are presented as mean ± SEM and composition

data are presented on a wet-weight basis. ................................................................ 174

Table 8. 2 Fatty acid density in the fish (mg/g/fish) after 21 days of fasting. Data

were fitted to logarithmic functions and presented as mean ± SEM. ....................... 175

Table 8. 3 Coefficient and exponent values derived from the power function (y=aXb)

of fatty acid loss over a wide range of fish sizes from ~10 g to ~440 g. Replication

was derived by manually bootstrapping each individual value and presented as mean

± SEM (n=18). .......................................................................................................... 180

Table 8. 4 Re-evaluation of the marginal efficiency of fatty acid utilisation in

barramundi. Data were transformed to LW exponent values determined from the

present study. Maintenance requirements and intake to gain ratio for each fatty acid

are presented ............................................................................................................. 182

Table 8. 5 Fatty acid demands in growing barramundi fed either 100% fish oil (FO)

or 100% poultry oil (PO) diets maintained at 30 °C. Calculations are based on the

predictive growth models and utilisation efficiencies from published studies for this

species ...................................................................................................................... 184

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List of figures Figure 1.1 Fish oil use over the past four decades. Major growth of the aquaculture

and the nutraceutical sectors in recent years has changed the supply and demand

dynamics of FO. Its use in industrial or non-human consumption application is now

limited (data adapted from http://www.IFFO.org). .................................................... 22

Figure 1.2 Chemical structure of long-chain polyunsaturated fatty acids (LC-PUFA)

n-3 (EPA, left) and n-6 (ARA, right) with twenty carbon chain length. The five

double (ethylenic) bonds of EPA are in the 5, 8, 11, 14 and 17 positions and the four

double bonds of ARA are in the 5, 8, 11 and 14 positions relative to the carboxyl

group (adapted from http://www.IUPAC.org). .......................................................... 26

Figure 1.3 The pathways of LC-PUFA biosynthesis. The Δ12 and Δ15 desaturase

enzymes are only found in photosynthetic plants, hence the essentiality of 18 carbon

precursors in vertebrates for LC-PUFA biosynthesis (Tocher, 2010). The grey

pathway is an alternative proposed by Tu et al. (2012) for barramundi that bypasses

the initial Δ6 desaturation rate limiting step. The fatty acids in red font are the

biologically important end products for vertebrates. Δ, desaturase enzymes; Elovl,

Elongation of very long carbon chains enzymes; CS, chain shortening by β-

oxidation. .................................................................................................................... 28

Figure 1.4. Typical fatty acid profiles of oils used in aquaculture and other terrestrial

animal nutrition. Data are adapted from Belcher et al. (2011); Glencross (2009);

Glencross and Rutherford (2011) and NUTTAB 2010 www.foodstandards.com.au. 31

Figure 3. 1 Whole-body retention of polyunsaturated fatty acids a) 18:2n-6 (y =

0.03x + 0.49, R2 = 0.13, P = 0.55) and b) 18:3n-3 (y = 0.65x + 0.10, R2 = 0.60, P =

0.13) and whole-body retention of long-chain polyunsaturated fatty acids c) ARA (y

= -1.08x + 1.03, R2 = 0.81, P < 0.05) , d) EPA (-0.04x + 0.52, R2 = 0.90, P < 0.05)

and e) DHA (y = 0.72x-0.44, R2 = 0.97, P < 0.05). ................................................... 63

Figure 3. 2 The linear relationship between the mass-independent intake relative to

mass-independent gain (marginal efficiency) of specific fatty acids by juvenile

barramundi. For comparative purposes the dotted line indicates the slope of 1.0 (y =

x). a) 18:2n-6 (y = 0.82x - 0.03, R2 = 0.75) b) 18:3n-3 (y = 1.04x - 0.01, R2 = 0.88)

c) ARA (y = 0.19x + 0.005, R2 = 0.43) d) EPA (y = 0.30x + 0.007, R2 = 0.95) e)

DHA (y = 0.27x + 0.01, R2 = 0.95). .......................................................................... 67

Figure 3. 3 Fillet (NQC) LC-PUFA deposition in juvenile barramundi expressed

relative to intake (y = -1.54x2 + 56.33x + 75.23, R2 = 0.99) as mg/100 g meat. By

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extrapolation the dotted line indicates that a formulation of ~11% total LC-PUFA

(EPA and DHA combined) would achieve a fillet composition of 500 mg/100 g. .... 68

Figure 5. 1 Hepatic gene expression of selected lipid metabolism genes in juvenile

barramundi (Lates calcarifer) after eight weeks of feeding. Relative expression is

calculated for each gene using cycle threshold values, normalised to control genes

(Elongation factor 1a and Luciferase). Values are shown as log-2 fold change relative

to the initial fish. Letters above error bars indicate significant differences between the

treatments. Analysed by two-way factorial ANOVA, df 1,1,1,8, post-hoc Tukey's

HSD. ......................................................................................................................... 112

Figure 6. 1 (A-D) Mass-balance computations of fatty acid retention and β-oxidation

in juvenile barramundi, mean (±SEM) n=3. Saturated fatty acid (a; SFA) retention

F=82.5***, β-oxidation F=5.2*; Monounsaturated fatty acid (b; MUFA) retention

F=44.5***, β-oxidation F=7.0*; Polyunsaturated fatty acid (c; PUFA) retention

F=10.8*, β-oxidation F=1.4, P=0.32; Long-chain polyunsaturated fatty acid (d; LC-

PUFA) retention F=6.1*, β-oxidation F=241.5***. Significant differences are

indicated by letters (*, P<0.05; **, P<0.01; ***, P<0.001), one - way ANOVA df

2,6., post-hoc Tukey’s HSD. .................................................................................... 132

Figure 6. 2 (A-F) Expression of lipid metabolism genes in the liver of juvenile

barramundi. All data are normalised to EF1α and Luc reference genes, log 2

transformed and expressed relative to the initial fish (WK 0), mean (±SEM) n=6. The

FO CTRL (control) groups are indicated by light bars and the FO FREE groups are

indicated by dark bars. Two-way repeated measures ANOVA, df of residuals 10,30.

Lc ACYL, Diet F=15.5**, Week F=2.3, P=0.09, Diet:Week F=1.0, P=0.39; Lc

CPT1a, Diet F=0.2, P=0.69, Week F=0.6, P=0.65, Diet:Week F=06, P=0.62; Lc

FAS, Diet F=48.5***, Week F=1.4, P=0.28, Diet:Week F=0.8, P=0.50; Lc SCD,

Diet F=126.6***, Week F=0.6, P=0.62, Diet:Week F=0.6, P=0.62; Lc ELOVL5,

Diet F=0.2, P=0.66, Week F=0.4, P=0.78, Diet:Week F=0.2, P=0.92; Lc FADS2,

Diet F=75.4***, Week F=0.7, P=0.59, Diet:Week F=0.2, P=0.91. Please refer to

Table 6.3 for individual gene details. ....................................................................... 136

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Figure 7. 1 Specific fatty acid retention efficiency by barramundi fed increasing EPA

(a-e) or ARA (f-j). The control (FO CTRL) fed fish are represented in each Figure

with a triangle (∆). Bars indicate standard error means (n=3). ................................ 158

Figure 7. 2 Marginal utilisation efficiency assessments of 20:5n-3 (a) and 20:4n-6 (b)

gain with varying intake by juvenile barramundi. Efficiency functions are described

by the linear regression for 20:5n-3 gain y = 0.621x + 0.0003, R2 = 0.975 and 20:4n-6

gain y = 0.919x - 0.011, R2 = 0.965). ........................................................................ 160

Figure 7. 3 Eicosanoid pathway and mitochondrial fatty acid oxidation gene

expression in the liver (a) and kidney (b) of juvenile barramundi fed increasing EPA.

Gene expression is normalised to the EF1α and Luc reference genes and expressed

relative to the control fish. Data were analysed by students t-test with significant

differences defined as P<0.05. ................................................................................. 163

Figure 7. 4 Eicosanoid pathway and mitochondrial fatty acid oxidation gene

expression in the liver (a) and kidney (b) of juvenile barramundi fed increasing ARA.

Gene expression is normalised to the EF1α and Luc reference genes and expressed

relative to the control fish. Data were analysed by students t-test with significant

differences defined as P<0.05. ................................................................................. 164

Figure 8. 1 Energy density of barramundi of varying live-weight before

(●=4.221(±0.010)x0.088(±0.001), R2 = 0.845) and after

(○=3.359(±0.011)x0.118(±0.001), R2 = 0.844) fasting for 21 days. ........................ 176

Figure 8. 2 Lipid density of the barramundi of varying live-weight before

(●=0.807(±0.019)ln(x) + 2.312(±0.002), R2 = 0.711) and after (○=0.981(±0.014)ln(x)

– 0.083(±0.003), R2 = 0.744) fasting for 21 days. .................................................... 177

Figure 8. 3 Fatty acid density (mg/g lipid) in barramundi of varying live-weight after

fasting for 21 days. Values were fitted to a logarithmic curve and equations are

presented in Table 8.2. ............................................................................................. 178

Figure 8. 4 Fatty acid (A and B) loss in fasted barramundi of varying live-weight.

Data are (n=3) mean ± SEM. Values were fitted to a power function and equations

are presented in Table 8.3. ........................................................................................ 183

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List of acronyms ADC Apparent digestibility coefficient ANF Anti-nutritional factor ANOVA Analysis of variance ARA Arachidonic acid cDNA Complementary deoxyribonucleic acid COX Cyclooxygenase (prostaglandin G/H synthase) DHA Docosahexaenoic acid DNA Deoxyribonucleic acid DPA Docosapentaenoic acid DP:DE Digestible protein to digestible energy ratio EFA Essential fatty acid EPA Eicosapentaenoic acid FAO Food and agricultural organisation FI:FO Fish in : Fish out ratio FM Fish meal FO Fish oil IUPAC International Union of Physical and Applied Chemists KO Krill oil LC-PUFA Long chain - polyunsaturated fatty acid LOX Lipoxygenase (arachidonate 5-lipoxygenase) MUFA Monounsaturated fatty acid NL Neutral lipid OLA Oleic acid PCR Polymerase chain reaction PF Poultry fat PL Polar lipid PO Palm oil PtdCho Phosphatidylcholine PtdEtn Phosphatidylethanolamine PtdIns Phosphatidylinositol PtdSer Phosphatidylserine PUFA Polyunsaturated fatty acid qRT-PCR Quantitative real time reverse transcription - polymerase chain reaction RNA Ribonucleic acid SEM Standard error of the mean SFA Saturated fatty acid SGR Specific growth rate SL Soybean lecithin SO Soybean oil STA Stearidonic acid TAG Triacylglycerol TGC Thermal growth coefficient WBFABM Whole-body fatty acid balance method

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General Introduction

1.1 Introduction

The world supply of wild capture seafood is unable to meet the needs of the growing

human population. Aquaculture continues to be a rapidly expanding industry

potentially able to address this problem. However, aquaculture in itself is only part of

the solution. Over the last three decades world aquaculture production has grown at

an average rate of 8.8% per annum and for the first time in 2010 exceeded 60 million

tonnes of edible product (FAO, 2012). Commercially produced diets are feeding this

rapid expansion which ironically has an insatiable appetite for wild fishery resources

already stretched to their limits. This resource is primarily based on small pelagic

forage fish (eg. sardines, herrings, anchoveta, mackerel) targeted specifically for

rendering into fish meal (FM) and fish oil (FO) which can be used in dietary

formulations for compound feeds. There is strong debate over the fish-in to fish-out

ratio (FI:FO) of aquaculture (Naylor et al., 2009; Tacon and Metian, 2008) and also

the transformation of directly edible fishery products into higher value species

(Naylor et al., 2000), hence the urgency to find and use alternative ingredients for

aquaculture.

Fish and crustaceans grown on commercially produced feeds consume a large

proportion of the world’s available FM and FO resources. It has become clear that if

aquaculture is to continue to grow at such levels then alternative plant and animal

resources must be utilised as feed ingredients. Each year the world supply of FO is

mostly consumed by the aquaculture industry while the nutraceutical industry

acquires more FO than ever before compounding the issue (Figure 1.1). As FM and

FO are finite resources their price and availability relative to alternative ingredients

will influence their eventual use in aquafeeds. However, for the use of alternative

ingredients to be a success, a clear understanding of the farmed species nutritional

requirements must be known (Hardy, 2010). The changing supply and demand

dynamics for FM and FO resources have led to record high prices putting further

emphasis on feed companies to reduce costs and become more sustainable.

Replacement of FM and FO in aquafeeds has been a research priority for

several decades. The use of many terrestrial plant and animal by-products is now

widely accepted as nutritionally important cost effective ingredients, however,

precaution is necessary in dietary formulation for a range of reasons including but

not limited to:

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The health effects on certain farmed aquatic animals caused by anti-

nutritional factors (ANF) present in plant ingredients (Gatlin et al.,

2007).

Maintaining high levels of feed utilisation and production efficiencies

of farmed aquatic animals (Naylor et al., 2009)

The functionality of alternative ingredients in terms of their storage

and processing characteristics (Glencross et al., 2007)

Cost benefit, economic viability and supply risks associated with

transport and availability of ingredients to feed producers compared to

FM and FO (Gatlin et al., 2007)

Maintaining appropriate n-3/n-6 ratios for specific species to maintain

metabolic homeostasis (Brown and Hart, 2011)

Figure 1.1 Fish oil use over the past four decades. Major growth of the

aquaculture and the nutraceutical sectors in recent years has changed the

supply and demand dynamics of FO. Its use in industrial or non-human

consumption application is now limited (data adapted from

http://www.IFFO.org).

The quality of the diets provided to aquatic animals can contribute to

improved production efficiency leading to shorter grow out periods and potentially

reduced environmental effects, critical to the aquaculture industry (Turchini et al.,

2009). However, the quality of the diets is defined by their ingredients and

0

200

400

600

800

1000

1200

1400

1600

1800

1970 1975 1980 1985 1990 1995 2000 2005 2010

Nutraceutical

Industrial

Aquaculture

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alternatives such as those derived from the sources mentioned above are generally

considered to be inferior to FM and FO and for a range of reasons (Glencross et al.,

2007). Certain nutrients present in FM and FO support ideal growth and health of

most fish and crustaceans and some of these are considered essential for normal

metabolic processes to occur (Gatlin et al., 2007).

The essentiality of a nutrient is often difficult to determine in any animal and

this is particularly true of fish. However, many research groups have demonstrated to

varying degrees how essential certain nutrients are to a range of different species

under different biotic and abiotic conditions. This information is of critical

importance to the aquafeed industry as they increase the use of non-marine based

ingredients. For example, most plant protein lacks an amino acid profile similar to

that of FM, often being deficient in the first limiting amino acids (eg. lysine and

methionine). If used in complete replacement to FM an obvious deficiency would

soon manifest in most fish culture systems. Despite these limitations,

supplementation with crystalline amino acids and blending different plant proteins

has allowed a gradual decrease in the total FM used for many species (Gatlin et al.,

2007).

Similarly, the lipid component of the diet is composed of essential fatty acids

(EFA) and non-essential fatty acids necessary for normal metabolic processes. For

example the complete replacement of FO with alternative oils from plant or animal

sources could lead to a deficiency as the essential fatty acids for that species may be

missing or in a disproportionate combination. Many researchers have investigated the

options for FO replacement in a range of species for two main reasons, the first being

the clearly limited supply of FO discussed earlier and secondly the fact that the lipids

remain the least well understood of all nutrients due to their complexity (Sargent et

al., 2002). More recently, research groups have approached the question of FM and

FO replacement simultaneously in an effort to gain an understanding of the

interactions of both ingredients (Glencross et al., 2016; Panserat et al., 2009; Refstie

et al., 2001; Torstensen et al., 2011).

The barramundi (Asian seabass: Lates calcarifer) is typically cultured in the

Indo-pacific region in relatively small tonnages compared to other species, however,

it is a culturally important and profitable industry that has potential to expand. In

light of the perceived image of global aquaculture as a net consumer of seafood

products, it is important that research continues into the search for and use of

alternative ingredients. As overall fish consumption increases, the demand on our

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oceans will be far exceeded by what it can produce and the sustainable production of

fish for human consumption is expected to meet that need. Research in this area will

continue to improve dietary formulations and efficient use of available ingredients.

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1.2 The role of lipids in fish nutrition

1.2.1 Lipid classes in fish tissues

With increasing efforts to replace FO from fish diets there is added emphasis on

understanding the fate of ingested lipid sources as this dietary nutrient is not only an

important energy source but it also has a bioactive role in many physiological

functions. Neutral lipid principally in the form of triacylglycerides (TAG) is the most

abundant form of ‘energy’ lipid in fish tissues. Its chemical structure is represented

by three fatty acids esterified to different positions on a glycerol backbone with

saturated (SFA) and monounsaturated fatty acids (MUFA) generally esterified to the

stereospecific numbering position one and three (sn-1,3) and polyunsaturated fatty

acids (PUFA) esterified to the sn-2 position (Tocher, 2003). Phosphoglycerides are

important polar lipids forming the bilayer of cell membranes. Structurally they have

two fatty acids esterified to phosphatidic acid (L-glycerol 3-phosphate). The major

phosphoglycerides of animal, including fish, tissues are phosphatidylcholine

(PtdCho), phosphatidylethanolamine (PtdEtn), phosphatidylserine (PtdSer), and

phosphatidylinositol (PtdIns) formed by esterification of the phosphatidic acid group

to different bases such as choline, ethanolamine, serine, and inositol respectively

(Tocher, 2003).

The relative proportion of each major fatty acid is generally related to its

origins in the environment. Northern hemisphere forage fish typically contain higher

levels of 20:1n-9 and 20:1n-11 long-chain monounsaturated fatty acids, directly

related to their diet of marine zooplankton rich in wax esters whereas Southern

hemisphere forage fish contain typically higher levels of long-chain polyunsaturated

fatty acids (LC-PUFA) (Sargent and Henderson, 1995). There are other lipid classes

such as wax esters (neutral lipid; NL), sphingolipids (polar lipid; PL) and sterols that

are important in vertebrate physiology, however, discussion about these is beyond

the scope of this review. In the context of feeding fish increasing amounts of

vegetable oils it has been demonstrated that different fatty acids have markedly

different fates. In Atlantic salmon (Salmo salar) the shorter chain SFA such as 10:0

is rapidly catabolised for energetic requirements, whereas the longer chain MUFA

18:1n-9 is deposited as TAG (Denstadli et al., 2011).

1.2.2 Fatty acid biochemical structure

Fatty acids are defined by the International Union of Physical and Applied Chemists

(IUPAC) as aliphatic monocarboxylic acids that can be hydrolysed from naturally

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occurring lipids (http://www.IUPAC.org). Systematic chemical names are given to

each fatty acid and these can be symbolically delta (Δ) classified as X:YΔa, b, c

where X is the number of carbons in the chain, Y is the level of double (or ethylenic)

bonds and Δ a, b, c represent the position of each double bond relative to the

carboxyl group of the fatty acid (Rigaudy and Klesney, 1979). A different lipid

numbering system is widely used and accepted whereby the number of carbon atoms

and double bonds are separated by a colon followed by the position of the first

double bond relative to the methyl terminus represented as n minus x (Glencross,

2009; Tocher, 2003; Turchini et al., 2009). Trivial common names are also applied to

fatty acids and they can be further abbreviated. Therefore in the order summarised

above 5,8,11,14-Icosatetraenoic acid is known also as 20:4Δ5,8,11,14, 20:4n-6,

arachidonic acid or ARA (Figure 1.2).

Figure 1.2 Chemical structure of long-chain polyunsaturated fatty acids (LC-PUFA) n-3 (EPA, left) and n-6 (ARA, right) with twenty carbon chain length. The five double (ethylenic) bonds of EPA are in the 5, 8, 11, 14 and 17 positions and the four double bonds of ARA are in the 5, 8, 11 and 14 positions relative to the carboxyl group (adapted from http://www.IUPAC.org).

1.2.3 Minimum and optimum lipid nutrition

Defining the role of lipids is a challenging area of research because of the complex

interaction between cellular function and various lipid types (Dowhan et al., 2008).

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Dietary lipids are well known to affect the performance and overall nutritional

quality of fish and this can easily be demonstrated in vivo (Sargent et al., 2002). The

lipid requirements in fish differs among species and life stages, whereby faster

growing juvenile fish have higher essential fatty acid (EFA) demands for neural

tissue development and other physiological processes (Glencross, 2009), while in

some species the requirement for EFA appears to be proportional to the total dietary

lipid (Glencross et al., 2002).

A recent study by Turchini et al. (2011a) demonstrated that the minimum and

optimum supply of EFA in salmonid fish is very different. These authors

demonstrated that in fact salmonid fish can satisfy their EFA requirement provided

the appropriate amount of precursor fatty acid is present, in this case 18:3n-3

(linolenic acid; Fig. 1.3). In their study the fish fed on a linseed oil based diet grew at

the same rate as those fed FO, highlighting the moral dilemma between providing a

sustainably cultured product with the increasing consumer demand for the

consumption of LC-PUFA. On the other hand, many studies have shown that marine

fish are not able to meet their EFA requirements through endogenous biosynthesis

from dietary precursors as they lack at least one of the enzymes required (Sargent et

al., 2002). There are few exceptions to this fact; however, marine species of the

Siganidae family are almost exclusively herbivorous and are able to desaturate and

elongate dietary precursors to meet their EFA needs (Monroig et al., 2012). Some

research groups now argue that trophic level is more important in defining a fishes

capacity to synthesise polyunsaturated fatty acids (PUFA) (Li et al., 2010).

The physiological role of lipids in fish becomes increasingly apparent when

the minimum or maximum limits are approached for an individual species. A range

of studies on cultured marine species including Atlantic cod (Gadus morhua)

(Morais et al., 2001), barramundi (Williams et al., 2003), white seabass (Atractoscion

nobilis) (Lopez et al., 2009), Japanese seabass (Lateolabrax japonicas) (Ai et al.,

2004), European seabass (Dicentrarchus labrax) (Peres and Oliva-Teles, 1999) and

gilthead seabream (Sparus aurata L.) (Santinha et al., 1999) have shown that optimal

lipid levels are between 10-20% and growth is energy dependant. In addition, there is

little or no evidence of a protein sparing effect by lipids in marine species, differing

markedly from salmonids (Hillestad and Johnsen, 1994). Studies have also drawn

attention to increased body fat as a result of increased dietary lipid in fish as

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Figure 1.3 The pathways of LC-PUFA biosynthesis. The Δ12 and Δ15

desaturase enzymes are only found in photosynthetic plants, hence the

essentiality of 18 carbon precursors in vertebrates for LC-PUFA biosynthesis

(Tocher, 2010). The grey pathway is an alternative proposed by Tu et al. (2012)

for barramundi that bypasses the initial Δ6 desaturation rate limiting step. The

fatty acids in red font are the biologically important end products for

vertebrates. Δ, desaturase enzymes; Elovl, Elongation of very long carbon

chains enzymes; CS, chain shortening by β-oxidation.

having downstream consequences for seafood processors and human health benefits

(Hillestad and Johnsen, 1994; Peres and Oliva-Teles, 1999; Williams et al., 2003).

Therefore, the significance of dietary lipids cannot be overlooked particularly

when dietary formulations are encroaching on the limits for each species. In

barramundi, it has been well documented that the digestible protein to digestible

energy ratio (DP:DE) decreases as the fish grow; however, they are not capable of

Elovl5 Δ5

Δ6 Δ12

Δ9

18:0

18:1n-9 18:2n-9

20:2n-9 20:3n-9

22:6n-3

CS Δ6 Elovl5

Δ5 Elovl5/2

Elovl2 Δ6

18:3n-3 18:4n-3

20:4n-3 20:5n-3

22:5n-3 24:5n-3

24:6n-3

20:3n-3

Elovl5

Δ6/8

Δ15

22:5n-6

CS Δ6 Elovl5

Δ5 Elovl5/2

Elovl2 Δ6

18:2n-6 18:3n-6

20:3n-6 20:4n-6

22:4n-6 24:4n-6

24:5n-6

20:2n-6

Elovl5

Δ6/8

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utilising high dietary lipid as a primary energy source when protein is not adequately

provided (Williams et al., 2003). Likewise, when levels of lipid are too low

barramundi begin to exhibit symptoms of a nutrient deficiency (Catacutan and

Coloso, 1995).

1.2.4 Alternative oils

Along with the many advantages of using alternative lipid sources in aquafeeds there

are some important issues that arise. Most notable are the direct health impacts on the

cultured species when an imbalance or deficiency exists and then on the final product

quality for human consumption. For further information on the final product quality

aspects of fish nutrition refer to Turchini et al. (2009).

The range of lipids being explored for potential use in animal nutrition is

expanding. Traditionally, terrestrial oils with abundant n-3 and n-6 PUFA derived

from oil seeds have been extensively researched in a wide range of vertebrate models

largely due to their availability and price (Table 1.1).

Table 1. 1 Current world production (MMT) and value (USD/tonne) data of major and emerging food grade oils.

Major lipid sources Production Value

Fish oil1 1 2650

Soybean oil 43179 1076

Canola oil2 23798 1160

Olive oil3 2869 3960

Palm oil 53827 770

Rice bran oil ~0.5 N/A

Sunflower oil 13748 1460

Linseed oil 0.5 1671

Data are from USDA 2013; www.indexmundi.com; NUTTAB 2010 www.foodstandards.com.au. 1Crude fish oil, production data 2009, value based on FOB vessel in drums 2Also rapeseed oil 3Extra virgin

Generally, the plant oils contain a mix of SFA, MUFA and PUFA as either

16:0 (palmitic acid), 18:0 (stearic acid), 18:1n-9 (oleic acid; OLA), 18:2n-6 (linoleic

acid) and 18:3n-3 (linolenic acid) and they are characteristically devoid of any LC-

PUFA (Fig. 1.4). In addition to these, less common are plant oils that contain high

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levels of 18:4n-3 (stearidonic acid; STA). STA in the human diet allows the

bypassing of the first rate limiting step of eicosapentaenoic acid (EPA) biosynthesis,

however, its commercial availability is limited (James et al., 2003) and its use in fish

diets has so far proven to be of limited value (Alhazzaa et al., 2011a; Tocher et al.,

2006b). More recently other products rich in LC-PUFA, including single cell

heterotrophs such as Schizochytrium sp. (Miller et al., 2007), Crypthecodinium sp

(Harel et al., 2002), Phaeodactylum tricornutum (Atalah et al., 2007) have been used

in FO replacement studies in fish. Furthermore, DuPont Applied Biosciences have

genetically modified a yeast species (Yarrowia lipolytica) to contain high levels of

EPA in its lipid content (Fig. 1.4) that is yet to be evaluated in fish (Belcher et al.,

2011; Gillies et al., 2012).

In addition to these existing alternatives, genetically modified oil seeds are a

promising alternative to meet the growing LC-PUFA demands and several plant

varieties now exist or are under development (Alonso and Maroto, 2000; Nichols et

al., 2010; Robert, 2006). Researchers have been able to develop high- EPA and high-

docosahexaenoic acid (DHA) producing cultivars of model species such as Nicotiana

benthemiana (Petrie and Singh, 2011) and Arabidopsis thaliana (Petrie et al., 2012)

by gene transfer from algae, effectively extending the natural biosynthetic pathways

found in plants. Commercially relevant production of LC-PUFA rich oil from

transgenic Camelina sativa was recently made available (Mansour et al., 2014; Ruiz-

Lopez et al., 2014) and evaluated in mice and fish without detrimental effects on

performance (Betancor et al., 2015; Tejera et al., 2016). These evolving technologies

are set to greatly improve the sustainability of aquaculture yet many challenges still

exist including approvals and consumer acceptance.

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Figure 1.4. Typical fatty acid profiles of oils used in aquaculture and other terrestrial animal nutrition. Data are adapted from Belcher et al. (2011); Glencross (2009); Glencross and Rutherford (2011) and NUTTAB 2010 www.foodstandards.com.au.

0%

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

Anch

ovy

Cod

Live

r

Squi

d

Krill

ARA

Aqua

gro

EPA

yeas

t

DHA

Aqua

gro

Bovi

ne

Ovi

ne

Avia

n

Porc

ine

Cano

la

Lins

eed

Oliv

e

Palm

Rice

bra

n

Soyb

ean

Sunf

low

er

OLA LOA LNA ARA EPA DHA OTHER

Marine oils Algal & yeast oils

Animal oils Plant oils

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1.3 Barramundi aquaculture nutrition

1.3.1 Macro nutrient requirements of barramundi

Macro nutrient requirements in barramundi have been determined over a range of

size classes and environmental conditions. Past studies have reached different

conclusions about the dietary strategies to improve production efficiency of

barramundi. Williams et al. (2003) reported that there was a tendency to spare

protein for growth particularly in juvenile barramundi whereas Catacutan and Coloso

(1995) found no protein sparing effect. In agreement, these authors also reported that

the most appropriate protein to energy ratio was in the range of 25 -27 mg/kJ.

However, they reported vastly different optimal nutrient specifications with 42.5%

and 10% (Catacutan and Coloso, 1995) and 60.3% and 18% (Williams et al., 2003)

protein and lipid respectively. In addition, Glencross and Bermudes (2012)

demonstrated that optimal DP:DE ratio decreased with increasing size of juvenile

barramundi. They also demonstrated an increased DP:DE requirement at higher

temperatures caused by decreased utilisation efficiency highlighting the importance

of different dietary strategies to improve production.

An early study into the use of dietary carbohydrate in barramundi found that

provided that dietary lipid was high then a high level of carbohydrate supported the

best performance (Catacutan and Coloso, 1997). However, in this study the diets

were not isoenergetic, nutrient dense nor were they formulated on a digestible basis.

Moreover, the pellets were produced using cold-screw press technology that would

not permit the complete gelatinisation of starch therefore reducing the energy

digestibility of the diets (Glencross et al., 2011a). Recent studies have shown that

barramundi actually have a poor ability to digest starch (Glencross et al., 2012).

These authors found that among a range of cereals commonly used in aquafeed,

wheat starch is one of the least digestible with a digestible value of only 9.6 kJ/g.

Studies in other carnivorous fish such as rainbow trout have demonstrated that the

value of carbohydrate is limited as a growth nutrient; however, it does have value as

an energy source (Saravanan et al., 2012). A similar response was seen in

barramundi, suggesting that they have a preference for metabolizable energy in the

form of protein or lipid and they derive little value from carbohydrate in terms of

growth (Glencross et al., 2014a).

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1.3.2 Alternative oils for barramundi

The replacement of FO with alternative oil sources continues to be a high priority for

aquafeed production worldwide. The barramundi is an obligate carnivorous fish

central to an expanding aquaculture industry in the Indo-Pacific region with a

reported LC-PUFA requirement in juvenile fish of around 1.2% (Williams et al.,

2006). However, variable responses of barramundi to FO replacement studies have

led to questions being raised about the upper limits of FO substitution in this species

(Glencross and Rutherford, 2011; Morton et al., 2014; Raso and Anderson, 2003; Tu

et al., 2013). Poultry fat (PF) is produced as a by-product of the chicken processing

industry and is characterised by its high 18:1n-9 and 18:2n-6 content (Turchini et al.,

2009). Poultry fat is commonly used to replace FO in fish diets providing an

excellent source of energy, however, it is characterised by a lack of n-3 LC-PUFA

(Turchini et al., 2009).

Depletion of LC-PUFA in the diet of barramundi can potentially lead to

reduced productivity and the onset of essential fatty acid deficiency symptoms

(Catacutan and Coloso, 1995; Glencross and Rutherford, 2011; Williams et al.,

2006). Moreover, a lack of dietary LC-PUFA will also likely be reflected in the flesh,

diminishing the human nutritional value of the product (Turchini et al., 2009). It is

well established that the regular consumption of food rich in n-3 LC-PUFA is a

fundamental part of a balanced diet and the Food and Agricultural Organisation

(FAO) recommend the consumption of 250 to 2000 mg/d (EPA and DHA) for adults

(FAO, 2010).

Highly variable or disproportionate retention of lipid or indeed specific fatty

acids may indicate metabolic changes as a direct result of the fed diet. Thomassen et

al. (2012) found that Atlantic salmon consuming a diet containing rapeseed oil with

supplemental EPA (20:5n-3) oil had significantly higher DPA (22:5n-3) retention via

elongation pathways. Moreover, these fish selectively retained DHA (22:6n-3)

efficiently and in absolute terms the proportion of DHA was significantly improved

when compared to those fish fed only rapeseed oil with no supplemental EPA.

Similarly, a dramatic reduction of LC-PUFA retention was demonstrated in both

barramundi and Atlantic salmon as dietary LC-PUFA increased (Glencross and

Rutherford, 2011; Glencross et al., 2014b). In contrast, Atlantic cod retained more

LC-PUFA as intake increased (Hansen et al., 2008).

Efficient feed utilisation has a determinant effect on costs and outputs in

aquaculture systems. In economics, a future return on an investment is estimated

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based on financial inputs and is termed the marginal efficiency of capital (Kalecki,

1937). Similarly, this concept can be applied in aquaculture nutrition in order to

better understand the relationship between dietary inputs and fish outputs over time.

It differs from deposition or retention in that it is not just a mass-balance model but

rather is a bioenergetic approach based on the weight independent relationships

between the intake and gain of a specific nutrient. The exact fate of ingested nutrients

is difficult to measure, however, calculation of the marginal (partial) efficiency can

provide a clearer understanding of the discrete contributions of a dietary nutrient.

The slope coefficient of the linear relationship is termed the efficiency of utilisation

for production (kpf), protein (kp) and lipid (kf) and this can be used to estimate the

response over a range of nutrient intake levels independent of mass (NRC, 2011).

Moreover, the slope of the regression can be further extrapolated until recovered

energy for growth is equal to zero thus providing an estimate of nutrient maintenance

requirements (NRC, 2011).

A number of studies have used this bioenergetic approach in determining the

marginal efficiencies and estimating maintenance requirements of energy, lipid and

protein in a variety of fish species. The marginal efficiencies of protein (kp) and lipid

(kf) of a range of species including Atlantic salmon, rainbow trout (Oncorhynchus

mykiss), European seabass, gilthead sea bream, white grouper (Epinephelus aeneus)

and yellow-tail kingfish (Seriola lalandi) generally range between kp 0.53 - 0.64 and

kf 0.72 - 0.91 (Booth et al., 2010; Bureau et al., 2006; Helland et al., 2010; Lupatsch

et al., 2003). In barramundi, Glencross and Bermudes (2010) showed that over a

range of temperatures from 25 to 32 °C the partial efficiency of energy (kpf) was

relatively consistent at 0.56 and protein (kp) was relatively consistent at 0.51. Despite

the apparent importance of EFA the energetic efficiencies and maintenance

requirements of these nutrients do not appear to have been investigated in fish using

a bioenergetics approach.

1.3.3 Different fatty acid class use by barramundi

In the context of feeding fish alternative oils, many studies have focused on the

essential fatty acids and their bioactive long-chain derivatives, EPA and DHA.

However, it is suggested that SFA and MUFA are preferred substrates for β-

oxidation in fish, sparing the more essential fatty acids for their functional and

biological roles (review by Henderson 1996). As alternative oils are being

increasingly used in aquafeeds it is important to understand the effect of increasing

dietary levels of SFA and MUFA, which are generally abundant in such oils, on lipid

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metabolism in fish. Carnivorous fish such as barramundi, rely heavily on β-oxidation

of lipid for their energetic requirements. Past studies have consistently shown

positive responses to the replacement of FO with a range of alternative oils such as

soybean, canola, rapeseed, Echium, usually included as blends (Alhazzaa et al.,

2011a; Raso and Anderson, 2003; Williams et al., 2006).

Atlantic salmon also performed well when fed diets with either low n-3

PUFA and high MUFA and in addition MUFA were found to be good substrates for

β-oxidation (Menoyo et al., 2003). In the same species, β-oxidation was found to be

dependent on energy demand and that when fatty acids were provided in excess to

synthetic demands they were increasingly β-oxidised for energy production

(Stubhaug et al., 2007; Torstensen et al., 2004). Denstadli et al. (2011) found that the

medium chain length decanoic acid (10:0) was rapidly oxidised for energy

production whereas OLA was primarily deposited in the intramuscular fat in Atlantic

salmon. In other species such as Atlantic cod reduced lipid deposition in the liver

was likely caused by selective β-oxidation of 16:0 and 18:0 SFA present in PO and

rapeseed oil (Jobling et al., 2008). In agreement, polka dot grouper (Cromileptes

altivelis) more readily oxidised lipid in diets containing SFA (coconut fat) for energy

rather than MUFA (olive oil); however, this was at the expense of efficient growth

(Smith et al., 2005). Further to this, the authors of a recent study on European sea

bass speculated that a single fatty acid (eg. OLA) might be more efficient at sparing

LC-PUFA from β-oxidation than oil blends (Eroldogan et al., 2013).

Using an in-vivo whole-body fatty acid balance approach for determining

fatty acid metabolism in rainbow trout, Turchini and Francis (2009) found that the

most heavily oxidised fatty acids were also the most dominant. However, in the fish

oil fed trout the most predominant dietary fatty acid (16:0) was not readily oxidised

for energy production, but rather was preferentially elongated to 18:0 or desaturated

to 16:1n-7. The same research group also found that the rate of β-oxidation of LC-

PUFA was reduced when Murray cod (Maccullochella peelii peelii) were fed diets

containing MUFA and SFA, which are generally abundant in alternative oils

(Turchini et al., 2011b). Moreover, a recent study on hybrid striped bass (White Bass

Morone chrysops × Striped Bass M. Saxatilis) concluded that diets containing SFA-

rich lipid and to a lesser extent MUFA-rich lipid were able to conserve tissue fatty

acid profiles possibly due to preferential β-oxidation (Trushenski et al., 2015).

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1.3.4 Different lipid class use by barramundi

The phospholipids form the structural bilayer of cell membranes providing integrity

and fluidity (Hazel and Williams, 1990; Tocher et al., 2008). Also central to their

biological importance is their association with apoproteins (forming lipoproteins)

that assist in the extracellular transport of lipids thus improving parameters such as

growth, survival and health throughout the organism (Tocher et al., 2008). However,

the total lipid content in fish is mostly composed of neutral lipid in the form of TAG

(Glencross, 2009).

There is evidence to suggest that most larval and early juvenile fish have a

dietary requirement for intact phospholipids as endogenous biosynthesis is not

sufficient (Coutteau et al., 1997). Coutteau et al. (1997) reported that the

phospholipid requirement of fish and crustaceans varied depending on the life stage

and history. Freshwater fish generally have lower dietary requirements, of around 2%

whereas marine fish generally have higher requirements up to 7%. Early studies

found that in both rainbow trout and Atlantic salmon the phospholipid requirement of

first swim-up sized fish (<0.2 g) was 4% supplied in the form of soybean lecithin

(Poston, 1990a; b). However, larger salmon (~7.5 g initial) showed no improvement

in terms of growth suggesting that endogenous synthesis of phospholipid is sufficient

to support the requirement of the fish and that high dietary levels had a negative

effect on survival (Poston, 1990a). It should also be noted that the latter study, and

possibly others, refer to a requirements based on the use of phospholipid containing

ingredients rather than the precise phospholipid content which is often unclear.

There are very few studies on the effect of dietary phospholipids in juvenile

fish greater than 5 g as it is generally accepted that they don’t have a requirement

based on the historical evidence presented for Atlantic salmon (Poston, 1990a).

Recently, the influence of dietary phospholipid from either krill oil or soybean

lecithin was investigated in Atlantic salmon from first feeding up to smolt (0 to 70 g

range) (Taylor et al., 2015). These authors demonstrated a range of improvements

among the parameters tested and concluded that Atlantic salmon have a dietary

requirement for intact phospholipid particularly in early development. Therefore,

with the continual reduction of FM and FO in commercial feeds and the complex

biochemistry of the phospholipids particularly in juvenile fish, further investigation

is warranted.

In barramundi, some notable effects on the phospholipid composition of

tissues have been identified, which may suggest that juvenile barramundi have a

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requirement for intact phospholipids (Alhazzaa et al., 2011b; Tu et al., 2013). It

appears that when dietary PL are not sufficient then very selective retention of tissue

phospholipids occurs in barramundi and other species, until depletion, this being a

mechanism to prevent the onset of phospholipid deficiency and secondary

pathologies as a result (Skalli and Robin, 2004; Tocher et al., 2008; Tu et al., 2013).

1.3.5 Essential fatty acids in barramundi

Nutrient deficiency in any species can be difficult to determine accurately due to the

difficulties in feeding a deficient diet. Early studies have specifically looked at fatty

acid deficiency in fish (Castell et al., 1972) while others studying nutrient

requirements have reached conclusions about deficiency signs and symptoms

(Catacutan and Coloso, 1995). There is a vast amount of literature on lipids and their

constituent fatty acids in fish diets and a focal point has been on their complexity,

uniqueness and biological importance (Sargent et al., 2002). The barramundi are

reported to have limited de novo capability to synthesise LC-PUFA (Alhazzaa et al.,

2011a; Mohd-Yusof et al., 2010; Tu et al., 2013). Moreover, the requirement of total

lipid and LC-PUFA is thought to be low based on the compositional status of wild

caught specimens compared to that of cultured barramundi (Nichols et al., 1998;

Nichols et al., 2014).

Clinical signs of nutrient deficiency become an important indicator of fish

health and productivity. If fish are fed a diet that is deficient in a particular nutrient

that cannot be synthesised endogenously, then their physical condition will begin

deteriorating once all body reserves become depleted. Further, secondary

pathological conditions may take hold as the animal becomes compromised and

without treatment premature death often follows. To avoid this situation arising,

commercially produced feeds need to ensure an adequate supply of all essential

nutrients, often achieved by the addition of FM and FO. However, global supply of

these resources is under increasing environmental and economic pressure. Therefore

it is important to determine critical inclusion levels of all essential nutrients in dietary

formulations for cultured species.

Several studies have induced EFA deficiency in a range of fish species. One

of the earliest was that of Castell et al. (1972) who documented the feeding of

rainbow trout over a prolonged time-course. These authors described a range of

deficiency symptoms such as; poor growth, fin erosion, changing pigmentation,

swollen livers and hearts and fainting or shock syndrome. A later study by Ruyter et

al. (2000) observed that Atlantic salmon exhibited poor growth, increased mortality

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and altered blood chemistry and liver condition after one month of feeding an EFA

deficient diet. In other species such as channel catfish (Ictalurus punctatus) (Satoh et

al., 1989), red drum (Sciaenops ocellatus) (Lochmann and Gatlin, 1993), turbot

(Psetta maxima) (Bell et al., 1985) and gilthead sea bream (Ibeas et al., 1996), signs

of EFA deficiency include a consistent range of symptoms, with the most prominent

being reduced growth performance and survival.

The precursors to LC-PUFA, 18:2n-6 and 18:3n-3 are considered essential or

at least conditionally essential in all vertebrates, including fish, as they lack the

desaturase enzymes required for their synthesis (Cunnane, 2003; Tocher, 2003).

Typically, freshwater and some diadromous species, are able to synthesise sufficient

LC-PUFA from these precursor fatty acids while in most marine fish species the

pathway of fatty acid biosynthesis is incomplete (Tocher, 2003). However, there are

distinct differences that exist between the marine fish in their capacity to

biosynthesise fatty acids. Recently, the presence of an alternative delta-4 pathway to

LC-PUFA was identified in the herbivorous marine fish Siganus canaliculatus (Li et

al., 2010). Cell lines of the marine fish turbot were used to demonstrate that

elongation activity was limiting whereas in gilthead sea bream delta-5 desaturase

activity was limiting the conversion of precursor fatty acids to LC-PUFA (Ghioni et

al., 1999; Tocher and Ghioni, 1999). The barramundi also lacks delta-5 desaturase

activity and is known to have a desaturase with delta -6/delta-8 dual activity in vitro

(Mohd-Yusof et al., 2010; Tu et al., 2013). Therefore, this evidence supports that in

vivo this species should succumb to EFA deficiency due to this inability to produce

the reputedly required LC-PUFA including EPA, DHA and ARA.

The lipid, and to a lesser degree the fatty acid requirements were examined in

barramundi by a number of studies, yet there is still no clear documentation of the

onset and progression of deficiency symptoms. Early studies demonstrated that

performance of larval barramundi was improved by incorporating preformed LC-

PUFA into enriched live prey (Dhert et al., 1990; Rimmer et al., 1994). Other

juvenile barramundi studies have reported signs of EFA deficiency such as abnormal

reddening of the fins and reduced growth performance associated with low levels of

n-3 LC-PUFA (Buranapanidgit and Boonyaratpalin, 1988; Catacutan and Coloso,

1995). More recently, Williams et al. (2006) demonstrated improvements in

barramundi productivity with increasing n-3 LC-PUFA at either 20 or 29 °C.

Williams et al. (2006) described a ‘fainting attack’ from a small number of their fish

and this effect has also previously been observed in rainbow trout fed EFA deficient

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diets (Castell et al., 1972). Glencross and Rutherford (2011) showed for the first time

that barramundi performance was clearly affected by the presence or absence of

certain EFA. These authors also reported symptoms such as reddening of the fins and

the opercular region, however, this was attributed to increasing DHA in the absence

of an equivalent increase of EPA.

1.3.6 EPA, ARA and eicosanoid metabolism in barramundi

Eicosapentaenoic acid (EPA; 20:5n-3) and arachidonic acid (ARA; 20:4n-6) are

important for many metabolic and physiological functions, and are precursor

molecules for the production of eicosanoid hormones that play a role in the

inflammatory response, immune function and regulation as well as ionic regulation

and reproduction in fish and mammals (Rowley et al., 1995). In humans, the

incidence of diseases involving inflammatory processes can be related to the

production of these eicosanoids, for example prostaglandin E2 (PGE2) and

leukotriene B4 (LTB4) that are derived from high cellular concentrations of ARA

(Wall et al., 2010). The cyclooxygenase (COX; prostaglandin G/H synthase) and

lipoxygenase (LOX; arachidonate 5-lipoxygenase) enzymes interact and compete for

the EPA and ARA substrates and as such the eicosanoids produced are determined

by their availability (Calder, 2012; Tocher, 2003).

The COX enzyme catalyses 20-carbon chain fatty acids (ARA or EPA)

through bis-dioxygenation and subsequent reduction to produce 2 - and 3 - series

prostaglandins (PGG2/3 and PGH2/3) that are substrates for the synthesis of

biologically active prostaglandins, prostacyclins and thromboxanes (Calder, 2012;

Rouzer and Marnett, 2009; Rowley et al., 1995). While the LOX enzyme catalyses

the same substrates to yield biologically active metabolites of hydroperoxy-

eicosatetraenoic acid (HPETE), such as leukotrienes and lipoxins (Matsumoto et al.,

1988; Rowley et al., 1995). Unlike most vertebrates, the COX enzyme system in

teleost fish is complicated by an evolutionary duplication event that led to alternative

chromosomal regions of COX genes, often identified as ‘a and b’ isoforms of either

the COX-1 or -2 series, but rarely both (Ishikawa and Herschman, 2007; Ishikawa et

al., 2007). There is also an accepted paradigm that COX-1 is constitutively expressed

whereas COX-2 is inducible, however, this is now widely viewed as an

oversimplified view (Breder et al., 1995; Olsen et al., 2012; Rouzer and Marnett,

2009).

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In many fish species, EPA and ARA are required for important metabolic and

physiological functions, and the dietary requirements are well understood (Bell and

Sargent, 2003; Izquierdo, 1996; Tocher, 2015). The consumption of diets rich in oils

that contain eicosanoid inhibiting or regulating substrates (Eg. EPA, 20:4n-3, 18:4n-

3) can have significant downstream modulatory effects on the fish (Ghioni et al.,

2002). However, without discounting the importance of ARA, there is great potential

for this fatty acid to affect growth, stress response, immune response and survival,

particularly at early life stages (Atalah et al., 2011; Bell and Sargent, 2003; Castell et

al., 1994; Montero et al., 2015b; Yuan et al., 2015).

Information on the EPA and ARA requirements in the barramundi or Asian

seabass are scarce In the only study available thus far, a single diet with a higher

inclusion of ARA in the absence of EPA showed negative effects on fish health,

including disproportionate tissue LC-PUFA retention and pathophysiological effects

such as subcutaneous haemorrhaging and disrupted ionic regulation (Glencross and

Rutherford, 2011). There is evidence to suggest that wild barramundi (either from

fresh or salt water) can contain ARA levels more than 5-fold higher than EPA in

their muscle tissue (Nichols et al., 2014). The increasing use of alternative oils in

farmed fish, often containing high levels of omega 6 fatty acids which can act as

ARA precursors (e.g. soybean oil, sunflower oil), and simultaneous reduction of

dietary fish oil, may impact the final ARA/EPA ratio in fish tissues, with possible

resulting issues associated with modified lipid metabolism (Brown and Hart, 2011).

1.3.7 Allometric scaling effects of LC-PUFA

A range of different approaches have been used to predict or determine growth as

well as feed requirements based on the dynamic flow of nutrients in aquatic systems

(Bar et al., 2007; Cho and Bureau, 1998; Glencross, 2008; Lupatsch and Kissil,

1998; Machiels and Henken, 1986). Predictive models started out as relatively simple

approaches such as the ubiquitous specific growth rate and thermal growth

coefficient calculations; however, progressive extensions of these models now exist

that consider the many biological properties of fish (Birkett and Lange, 2007; Dumas

et al., 2010). In addition, mass-balance models have also been developed and used in

understanding specific nutrient and metabolite flows in a range of model species

(Cunnane and Anderson, 1997; Turchini et al., 2006; Turchini et al., 2007) as well as

a whole ecosystem approach (Sawyer et al., 2016).

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There is a growing body of evidence regarding the essential fatty acid requirements

of many species generally determined by various forms of in vivo feeding

assessments (NRC, 2011). The efficient utilisation of fatty acids within an organism

depends on a number of factors and there are many complex interactions among

specific fatty acids potentially affecting their utilisation efficiency (Glencross, 2009;

Tocher, 2015). Despite the numerous studies to date, relatively little is known about

the maintenance requirements and utilisation efficiencies associated with specific

fatty acids and how these may be used in nutrient modelling. An obvious step in the

further development of these models is the incorporation of empirically derived

utilisation efficiency values. Maintenance requirements of protein, lipid and energy

typically described by linear equations of intake to gain ratios can give an insight

into the partitioning of production and maintenance costs (Bureau et al., 2006; NRC,

2011; Pirozzi et al., 2010). Similarly, it should be possible to determine estimates of

productivity for specific fatty acids using derived body weight scaling exponent

values to provide a size independent response (Bar et al., 2007; Glencross and

Bermudes, 2011; White, 2011).

1.4 Thesis structure

The thesis presented herein is an adaptation of a series of published manuscripts. The

manuscripts have been peer reviewed and published in high standing journals

relevant to the field of aquaculture nutrition. The following (second) chapter

summarises the materials and methodology utilised during experimentation. This

section is divided to cover key areas including experimental diet production,

experimental methodologies and experimental analyses. The second chapter also

includes an ethical statement encompassing all research chapters using live animals.

Chapter three to chapter eight are the six experimental research chapters that have

been adapted from published and submitted manuscripts. Each provides the reader

with a concise aims and methods section followed by detailed results and discussion.

The ninth chapter is a general summary followed by a general conclusion.

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General methodology

2.1 Diet production

The following methods were used during the experiments conducted as part of this

thesis.

2.1.1 Ingredient preparation

This method applies to all of the experiments with the exception of Chapter 8 as

there were no diets produced. The dry ingredients were passed separately through a

hammermill (Mikro Pulverizer, type 1 SH, New Jersey, USA) such that the

maximum particle size was less than 750 μm. All ingredients were then thoroughly

mixed using an upright commercial mixer (Bakermix, Model 60 A-G, NSW,

Australia). Fish meal was defatted prior to use in experimental Chapter 4, Chapter 5,

Chapter 6 and Chapter 7. This was achieved by manually mixing hexane and fish

meal (2:1) in a large drum. The mix was left to soak for 3h before draining the excess

hexane and repeating the process a second time. The fish meal was then oven dried

overnight at 60 °C to a constant dry matter.

2.1.2 Diet preparation by screw press technology

This method applies to Chapter 4, Chapter 5 and Chapter 6. A single basal diet was

formulated and prepared without the addition of dietary lipids. The basal diet was

then separated into smaller batches and aliquots of lipid (8.2% diet) were added to

form the treatment diets. Fresh water was added at approximately 30% of dry mash

weight and mixed to form a consistent dough, then the dough was subsequently

screw pressed through a 4 mm die Dolly Pasta Extruder (La-Monferrina,

Sant’Ambrogio di Torino, Italy). The pellets were dried overnight at 60 °C to a

constant dry matter. Pellets were then stored at -20 °C until required.

2.1.3 Diet preparation by extrusion technology

This method applies to Chapter 3 and Chapter 7. The pellets were produced using a

laboratory-scale twin-screw extruder with intermeshing, co-rotating screws (MPF24,

Baker Perkins, Peterborough, United Kingdom). The following parameters were

used, however, these are only examples and vary depending on the formulation

across experiments.

The dry mash was delivered into the barrel at a feed rate of around 400 g/min.

Barrel temperatures were set for each of the four zones from drive to die at 60, 80,

100 and 110 °C respectively. The following methodology was based on Glencross et

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al. (2016). The extruder barrel was a smooth-walled, open clam design with twin

screws measuring 24 x 600 mm (diameter x length). The screws were configured

with a series of feed screws (FS), forward paddles (FP) and lead screws (LS)

arranged to defined barrel diameters (D). The configuration was 16D FS, 2D FP, 1D

FS, 2D FP, 1D LS, 1D FP, 2D LS: to the die. Feeds were extruded through a 2 mm Ø

die with the machine running at c. 326 rpm. Water was peristaltically pumped

(Baoding Longer Precision Pump Co., Ltd, Hebei, China) into the barrel at 24

mL/min. Pellets obtained a 1.5-fold increase in diameter by expansion were cut off at

lengths of ~4 mm using a variable speed 4-blade cutter and dried overnight at 60 °C

to a constant dry matter.

2.1.4 Vacuum infusion of lipid

Prior to vacuum infusion the lipid sources were warmed at 60 °C to ensure a

homogeneous blend of the lipids as liquefied oils before the prescribed allocation of

dried pellets was placed into a large mixing bowl and oil slowly added while mixing

to ensure even coating. A perspex lid was then placed on the bowl with a rubber seal

and vacuum pump was then connected through a small fitting. Suction was applied to

achieve a maximum of 100 kPa pressure or until all visible signs of air escaping the

pellets had ceased at which point the suction was released and the oil infused as the

chamber re-equilibrated to atmospheric pressure. Pellets were then stored at -20 °C

until required.

2.2 Experimental methodology

2.2 Ethical statement

Ethical clearance was approved for each of the experimental procedures by the

CSIRO Animal Ethics Committee (Chapter 3.0 A09/2011; Chapter 4.0 A12/2013;

Chapter 5.0 A11/2013; Chapter 6.0 A10/2013; Chapter 7.0 A05/2014; Chapter 8.0

A3/2015). All manipulations with animals were conducted in adherence of the

ethical conditions. Wherever possible the use of animals was minimised and those

remaining after experimentation were returned to a stock holding facility.

2.3 Barramundi husbandry

For each experiment, juvenile barramundi (Lates calcarifer) were sourced from the

Betta Barra fish hatchery (Atherton, QLD, Australia), on-grown in a 10,000L tank

and fed a commercial diet (Marine Float; Ridley Aquafeed, Narangba, QLD,

Australia). Prior to commencement of the experiment the selected fish were

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transferred to a series of experimental tanks with flow-through heated seawater at a

flow rate of about 3 L/min being supplied to each of the tanks. There were 20

individually weighed fish per tank used in Chapter 3, 26 individually weighed fish

per tank used in Chapter 4, Chapter 5 and Chapter 6, 30 individually weighed fish

per tank used in Chapter 7 and 15 individually weighed fish per tank used in Chapter

8. Photoperiod was constant at 12L:12D. Three experimental systems were used

during experimentation; 300 L aquaria were used for Chapter 4, Chapter 5 and

Chapter 6; 600 L aquaria were used for Chapter 3, and Chapter 8; and 1000 L aquaria

were used for Chapter 7. In each case, the experimental diets were randomly

distributed amongst the tanks with each treatment having three replicate tanks.

Depending on the experimental design, the fish were managed according to one of

the following protocols.

1) The diets were fed once daily to apparent satiety as determined over three separate

feeding events, for eight weeks. Any uneaten feed was collected shortly after and a

correction factor was applied (Helland et al., 1996). Briefly, the correction factor was

calculated as the proportion of soluble losses after immersion in water for 1 h

(Chapter 3, Chapter 4, Chapter 5 and Chapter 6).

2) The fish were restrictively fed, once daily, a sub-satietal (approximately 80%)

pair-feeding regime in order to avoid the potentially confounding issue of

unregulated feed intake (Chapter 7) (Glencross et al., 2003a).

3) At the beginning of the experiment the tanks held six treatment size classes of

fish, which were randomly distributed among the tanks with each treatment having

three replicate tanks. The fish were then starved for 21 days (Chapter 8).

2.4 Sample collection techniques

For each experiment six fish of similar size from the original stock were euthanized

by an overdose of AQUI-S™ (Lower Hutt, New Zealand) at the beginning of the

experiment and stored at -20 ºC until analysis. Upon termination of the experiment, a

further six fish were sampled from each tank. A sample of whole blood was removed

from the caudal vein of three fish using 1 mL pre-heparinised syringes and an 18 G

needle. Blood from the three fish was pooled in a single Vacutainer™ tube and then

centrifuged at 10,000 rpm for 5 min to settle the erythrocytes. The plasma was then

drawn off and transferred to a 1.5 mL Eppendorf™ tube and frozen at -80 °C before

being sent for chemical analysis at the West Australian Animal Health Laboratories

(South Perth, Western Australia). From the same three fish and three from the initial

stock, a sample of liver tissue for molecular analysis was removed upon termination

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or at each fortnightly sampling event. We anticipated relatively minor changes in

gene expression and therefore we only included the control and extreme dietary

treatments for analysis. Samples were placed into 1.5 mL screw-top vials and kept on

dry ice before being transferred to a -80 °C freezer until analysis. All sampling

procedures occurred 24 h after feeding in the post absorptive phase (Wade et al.,

2014). If interim samples were required individual fish (n=3 per tank) were collected

in the same fashion after each fortnightly period and upon termination of the

experiment. Any remaining fish returned to their respective tank after a short

recovery.

2.5 Abnormalities and behaviour assessment

This method only applies to Chapter 6. The physical condition of all the individual

fish was recorded at each fortnightly sampling event. Any fish that had symptoms

such as erosion of the fins, reddening of the fins and extremities, gross lesions and

physical deformities were recorded. For the assessment, fish were considered either

normal or abnormal based on the presence or absence of at least one symptom. A

percentage score was given to each tank and each tank was used as a replicate within

each treatment. The behaviour of each tank of fish was assessed by an operator

holding a hand over the corner of a tank to simulate commencement of a feeding

event. Fish activity was scored as being either cryptic (0), ambivalent to the hand (1)

or actively searching for food (2). This assessment was carried out prior to feeding

on the same day of each week by the same operator to maintain consistency and the

results were averaged across time to give a repeated measures response to each tank.

Each tank was used as a replicate within each treatment (Glencross and Rutherford,

2011).

2.6.1 Digestibility analysis – settlement

Yttrium oxide was used in each diet formulation at 1g/kg as an inert marker for

digestibility analysis. Two different methods of faecal collection were used during

experimentation. The settlement method applies to Chapter 4, Chapter 5 and Chapter

6. Prior to the termination of the growth assay, faeces were collected using the

established settlement protocol described below (Blyth et al., 2014). Briefly, a

collection chamber was filled with water and frozen then attached to the evacuation

line of a swirl separator and left overnight. The following morning, the collection

chamber was removed and the chilled faeces were captured in a plastic sample

container and stored at -20 °C until analysis.

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2.6.2 Digestibility analysis - abdominal stripping

This method applies to Chapter 7. Upon termination of the growth assay, faeces were

collected using established abdominal stripping protocols (Blyth et al., 2014).

Briefly, the fish were netted from their tanks and anesthetised, then gentle abdominal

pressure was applied to the distal intestine to extract the faeces. Care was taken by

the operator to avoid contamination of the sample with foreign material and hands

were rinsed after each stripping. The faecal sample was placed into a small plastic

vial on ice before being stored in a freezer -20 °C until analysis.

2.7 Experimental analyses

2.7.1 Chemical analysis

These methods apply to all experiments. Prior to analysis the diets were each ground

to a fine powder using a bench grinder (KnifeTec™ 1095, FOSS, Denmark). The

initial and final fish were processed using the following method. The whole fish were

passed through a commercial meat mincer (MGT – 012, Taiwan) twice to obtain a

homogeneous mixture. A sample was taken for dry matter analysis and another

sample was freeze-dried along with the faecal samples until no further loss of

moisture was observed (Alpha 1-4, Martin Christ, Germany). Dry matter was

calculated by gravimetric analysis following oven drying at 105ºC for 24 h. Crude

protein was calculated after the determination of total nitrogen by organic elemental

analysis (CHNS-O Flash 2000, Thermo Scientific, USA), based on N x 6.25. Total

lipid content was determined gravimetrically following extraction of the lipids using

chloroform:methanol (2:1) following Folch et al. (1957). Gross ash content was

determined gravimetrically following loss of mass after combustion of a sample in a

muffle furnace at 550 °C for 24 h. Gross energy was determined by adiabatic bomb

calorimetry (Parr 6200 Calorimeter, USA). Total yttrium concentration in the diets

and faeces was determined after nitric acid digestion in a laboratory microwave

digester (Ethos One, Milestone, Italy) using inductively coupled plasma-mass

spectrophotometry (ICP-MS) (ELAN DRC II, Perkin Elmer, USA).

2.8.1 Biochemical analysis – Lipid transesterification

These methods apply to all experiments. Fatty acid composition was determined

following the methods of Christie (2003). Lipids were esterified by an acid-catalysed

methylation and 0.3 mg of an internal standard was added to each sample (21:0

Supelco, PA, USA). The fatty acids were identified relative to the internal standard

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following separation by gas chromatography (GC). An Agilent Technologies 6890N

GC system (Agilent Technologies, California, USA) fitted with a DB-23 (60 m x

0.25 mm x 0.15 μm, cat 122-2361 Agilent Technologies, California) capillary

column and flame ionisation detection was used. The temperature program was 50–

175 ºC at 25 ºC /min then 175–230 ºC at 2.5 ºC /min. The injector and detector

temperatures were set at 250 ºC and 320 ºC, respectively. The column head pressure

was set to constant pressure mode at 170 kPa using hydrogen as the carrier gas. The

peaks were identified by comparing retention times to the internal standard and

further referenced against known standards (37 Comp. FAME mix, Supelco, PA,

USA). The resulting peaks were then corrected by the theoretical relative FID

response factors (Ackman, 2002) and quantified relative to the internal standard.

Lipid extracts were applied to silica Sep-Pak® (Waters, Massachusetts, USA)

columns and separated into neutral (non-phosphorus) lipid and polar (phosphorus)

lipid following (Juaneda and Rocquelin, 1985). Briefly, Sep-Pak® columns were

pre-conditioned with 4 mL of hexane before a 30 mg sample of lipid dissolved in

chloroform was applied to each column. The neutral lipid was first eluted with 20

mL of chloroform and followed by 5 mL of chloroform:methanol (49:1). The polar

lipid was then eluted with 30 mL of methanol. The proportion of either neutral or

polar lipid was quantified gravimetrically and then an aliquot was further esterified

and separated into fatty acids following the protocol above.

2.8.2 Biochemical analysis – Plasma chemistry

These methods only apply to Chapter 5 and Chapter 6. Plasma samples were sent to

the West Australian Animal Health Laboratories (South Perth, Western Australia) for

enzyme and chemistry assessment. The assays were run on an Olympus AU400

automated chemistry analyser (Olympus Optical Co. Ltd). Each of the assays used

was a standard kit developed for the auto-analyser. The tests performed included

alanine aminotransferase (ALT, EC 2.6.1.2) (Olympus kit Cat. No. OSR6107),

creatine kinase (CK, EC 2.7.3.2) (Olympus kit Cat. No. OSR6179), glutamate

dehydrogenase (GLDH, EC 1.4.1.2) (Randox kit Cat. No. GL441), total protein

(Olympus kit Cat. No. OSR6132), creatinine (Olympus kit Cat. No. OSR6178),

alkaline phosphatase (Olympus kit Cat. No. OSR6004), glucose (Olympus kit Cat.

No. OSR6121), haemoglobin (Randox kit Cat. No. HG1539) and haptoglobin

(Randox kit Cat. No. HP3886). Trace elements were determined after mixed acid

digestion using inductively coupled plasma mass spectrometry (ICP-MS).

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2.9.1 Molecular analysis - Cloning of putative prostaglandin G/H synthase

(COX) and arachidonate 5-lipoxygenase (LOX) genes

These methods only apply to Chapter 7. Sequences of the prostaglandin G/H

synthase and arachidonate 5-lipoxygenase (COX1a, COX1b, COX2 and ALOX-5)

genes from several teleost species were identified in the Genbank database. Highly

conserved regions from protein alignments across species were used to design pairs

of degenerate primers that were subsequently synthesised by Sigma-Aldrich (Table

3). PCR primers specific to each target gene were designed using PerlPrimer v.1.1.17

(Marshall, 2004). Pooled barramundi liver cDNA (1000 ng) was amplified in

reactions, with each degenerate primer pair (F and R; 10 μM) using platinum TAQ

mix (Thermofisher). Polymerase chain reaction (PCR) conditions including an initial

denaturation step at 90 °C for 2 min followed by 35 cycles of 94 °C/10 s, 50 °C/30 s

(50% ramp speed) and 72 °C/30 s with a final extension step of 72 °C/5 min were

used. The amplification products were separated by size using electrophoresis on a

1% agarose gel and then excised and extracted using the QIA quick gel extraction kit

(QIAGEN). The target was then ligated using the pGEM-T Easy vector system

(Promega). Ligation reactions were then transformed onto One Shot TOP10

chemically competent Escherichia coli cells (Thermofisher) which were then

cultured overnight on LB ampicillin plates (100 μg/mL). Positive clones were

selected by PCR amplification with primers flanking the multiple cloning site (M13F

and M13R), using an initial denaturation step at 94 °C/5 min followed by 35 cycles

of 94 °C/20 s, 55 °C/30 S, 72 °C/1.5 min with a final extension step of 72 °C/5 min.

Randomly selected positive clones were prepared for sequencing with a QIAprep

Miniprep kit (QIAGEN) and then the plasmid insert was sequenced using the

BigDye® Terminator V3.1 sequencing kit (Applied Biosystems) with an ABI 3130

Automated Capillary DNA Sequencer (Applied Biosystems).

2.9.2 Molecular analysis - Sequencing analysis

These methods only apply to Chapter 7. Multiple alignments of the target genes (Lc

COX-1a, Lc COX-1b, Lc COX-2 and Lc ALOX-5) were made using the CLC

Genomics Workbench software (CLC Bio, Aarhus, Denmark). The ORF and amino

sequence alignment and analysis were conducted using the Create Alignment tool,

and confirmed as the target gene sequence using the BLASTX algorithm

(http://blast.ncbi.nlm.nih.gov/Blast.cgi). Sequence analysis of the previously

unreported Lates calcarifer COX and LOX genes identified expressed sequence tags

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(EST) of between 752 and 999 base pairs, open reading frame protein alignments

showing similarity with other teleost fish are presented in Appendix -Supplementary

Figures 1 a-d.

2.9.3 Molecular analysis - RNA extraction and normalisation

These methods apply to Chapter 5, Chapter 6 and Chapter 7. Total RNA was

extracted from the liver samples using TRIzol reagent (Invitrogen) according to the

manufacturer’s instructions. RNA was precipitated using equal volumes of

precipitation solution (1.2 M sodium chloride and 0.8 M disodium citrate) and

isopropyl alcohol (Green and Sambrook, 2012). To eliminate any residual traces of

DNA, total RNA was DNase digested with the Turbo DNA free kit (Applied

Biosystems). To verify that RNA was not contaminated, an aliquot of DNase

digested RNA from each sample was pooled and later PCR amplified as a negative

control. A NanoDrop spectrophotometer (NanoDrop Technologies) was used to asses

RNA quantity and a Bioanalyser (Agilent Technologies) using RNA nanochips

(Agilent #5067-1511) was used to asses RNA quality. All RNA samples were

normalised to 200 ng/μl.

2.9.4 Molecular analysis - Quantitative real time reverse transcription

polymerase chain reaction (qRT-PCR)

These methods apply to Chapter 5, Chapter 6 and Chapter 7. Reverse transcription

was performed on 1 μg of total RNA using Superscript III (Invitrogen) with 25 μM

oligo (dT)20 and 25 μM random hexamers (Resuehr and Spiess, 2003). Expression of

a range of genes involved in fatty acid metabolism was analysed by real-time PCR as

described below. Real-time PCR primers specific to each target gene were designed

using PerlPrimer v.1.1.17 (Marshall, 2004). Real-time PCR amplification reactions

were carried out using 2X SYBR Green PCR Master Mix (Applied Biosystems), 0.2

μM of Real-Time PCR primers specific to each gene and the equivalent of 7.5 ng of

reverse-transcribed RNA. Of the genes examined in Chapter 5 and Chapter 6, fatty

acid elongation 5, fatty acid desaturation 6 and elongation factor 1α (GQ214180.1,

GQ214179.1, GU188685) are contained within the public nucleotide database. The

remaining genes were previously identified and reported following next generation

sequencing of barramundi liver tissue and BLAST similarity searches (Wade et al.,

2014). The raw sequence read data are made available online through the CSIRO

Data Access Portal (http://doi.org/10.4225/08/55E799BA0F73E). Amplification

cycle conditions were 2 min at 50 °C, 10 min at 95 °C followed by 40 cycles of 15 s

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at 95 °C and 40 s at 60 °C. After amplification, a melt curve analysis was routinely

performed to verify the specificity of the target gene. Reactions were setup using the

epMotion 5070 robot (Eppendorf) and run in triplicate on a Viia7 real-time PCR

system (Applied Biosystems). Changes in expression levels of each gene were

determined by normalising the cycle threshold values for each gene to elongation

factor 1 alpha (EF1α) and Luciferase reference genes. The EF1α and Luciferase

genes are routinely used as a reference in this species (De Santis et al., 2011; Wade

et al., 2014).

2.10 Calculations

The following equations have been used for the calculation of results during

experimentation.

1) Differences in the ratio of dry matter, protein, lipid and energy to yttrium in the

diet and faeces were calculated to determine the apparent digestibility coefficients

(ADC) using the formula:

Where Y diet and Y faeces represent the yttrium content in both the diet and faeces,

respectively and Parameter diet and Parameter faeces represent the nutritional parameter

(dry matter, protein, lipid and energy) in the diet and faeces, respectively (Maynard

and Loosli, 1979).

2) Nutrient deposition efficiencies were calculated as the ratio of the nutrient or

specific fatty acid gained relative to their respective consumption during the study

period using the formula:

Where Nf and Ni are the final and initial nutrient composition (g/fish) of the fish on a

wet basis, respectively, and Nc is the amount of the nutrient consumed (g/fish) during

the study period (Maynard and Loosli, 1979).

3) Maintenance demands and utilisation efficiencies were then determined from the

regression of marginal fatty acid intake against marginal fatty acid gain on a

transformed live-weight basis following (Glencross, 2008) using the formula:

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Where Intake FA or Gain FA is the specific fatty acid consumed or gained (g/fish) on a

weight specific (geometric mean live-weight g/fish) basis then transformed to a fatty

acid specific exponent. The duration of the study period in days is defined as d.

4) The assessment of somatic losses was based on the formula previously reported by

Glencross and Bermudes (2011):

Where the Wi and Wf are the initial and final weights of the fish respectively. Ei and

Ef are the initial and final energy content of the whole fish on a live-weight basis

respectively. The time of the assessment is denoted as t. The determination of lipid

and fatty acid loss was calculated in the same way by substituting the appropriate Ei

and Ef values with the corresponding values for either lipid or fatty acids.

5) The computation of apparent in vivo fatty acid elongation, desaturation and β-

oxidation was performed using the whole-body fatty acid balance method

(WBFABM) following Turchini et al. (2007). Briefly, this involved determination of

the appearance/disappearance of specific fatty acids by mass balance. The resulting

values of net appearance/disappearance were then transformed to a molecular weight

basis per gram of body weight per day (nmol/g fish/d). Subsequent back calculations

along the known fatty acid bioconversion pathways were used to determine the fate

of specific fatty acids

2.11 Statistical interpretation

All data are expressed as mean ± standard error of the mean (SEM) or mean with

pooled standard error mean unless otherwise specified. All data were checked for

normal distribution and homogeneity of variance by qualitative assessment of

residual and normal Q-Q plots. Growth performance data were analysed using a

range of statistical tests including polynomial contrasts, repeated-measures analysis,

linear regression, two-way factorial ANOVA, one-way ANOVA, or paired t-test,

Holm adjusted. Levels of significance were compared using Tukey’s HSD a

posteriori test.

Energy, lipid and fatty acid losses were examined relative to the geometric

mean weight in grams of the initial and final fish from each treatment size class. All

relationships were examined using a power function (y=aXb) or a logarithmic

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function (y=b ln(x)+a). Microsoft Excel (Microsoft Office 2007) was used to

generate the equations and figures. A bootstrapping approach was used to generate

replications of coefficient and exponent values of energy, lipid and fatty acid loss in

order to analyse the data statistically.

The RStudio package v.0.98.501was used for all statistical analyses (R Core Team,

2012). Any percentage data were arcsine transformed prior to analysis. Significance

among the treatments defined as P < 0.05.

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Experimental Chapters

3.0 Marginal efficiencies of long chain-polyunsaturated fatty acid

use by barramundi (Lates calcarifer) when fed diets with varying

blends of fish oil and poultry fat

Adapted from

Salini, M.J., Irvin, S.J., Bourne, N., Blyth, D., Cheers, S., Habilay, N., Glencross,

B.D., 2015. Marginal efficiencies of long chain-polyunsaturated fatty acid use by

barramundi (Lates calcarifer) when fed diets with varying blends of fish oil and

poultry fat. Aquaculture. 449, 48-57

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3.1 Aims

It was hypothesised that barramundi would reach a critical limit of FO substitution

when absolute levels of dietary LC-PUFA dropped below estimated requirement of

around 1.2% (Williams et al., 2006). Therefore a series of diets were developed to

examine the effects of diluting fish oil with poultry fat on the growth and feed

utilisation performance of juvenile barramundi and to determine the consequences of

this on the fillet fatty acid profiles. This study also aimed to develop a strategy for

fish oil replacement with defined impacts on meat n-3 LC-PUFA levels.

3.2 Materials and Methods

The methodology used in the present experiment are detailed in the section 2.0

General methodology. Ethical clearance was approved for the experimental

procedures by the CSIRO Animal Ethics Committee (Application A09/2011). The

chemical composition of the main dietary ingredients is presented in Table 3.1. The

formulation and chemical composition of the five diets are presented in Table 3.2.

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Table 3. 1 Chemical composition of key ingredients. All data are g/kg DM unless otherwise stated. Fatty acid data are expressed as a percentage of total fatty acids (%). FM WF LM WG PM FO PF Dry matter 933 868 903 921 953 998 997 Crude protein 706 112 432 816 671 9 7 Lipid 101 18 76 97 164 949 996 Ash 139 6 28 4 137 1 0 Gross energy (MJ/kg) 20.0 16.5 18.9 21.3 21.0 39.2 38.7 14:0 5.2 0.2 0.2 0.1 1.5 8.3 1.1 16:0 24.1 20.3 12.1 20.2 27.3 19.0 23.0 18:0 7.2 1.5 5.5 1.2 8.6 3.7 6.1 16:1n-7 5.3 0.4 0.1 0.1 6.4 10.3 5.6 18:1n-9 13.2 14.4 0.0 12.4 41.3 10.1 42.8 18:2n-6 1.5 56.5 41.3 59.4 8.9 1.6 16.2 18:3n-3 0.8 3.5 4.9 2.8 0.7 0.7 2.0 20:4n-6 0.1 0.0 0.0 0.0 0.0 1.1 0.0 20:5n-3 9.0 0.4 1.5 0.6 0.0 17.3 0.6 22:5n-3 0.0 0.0 0.0 0.0 0.0 0.0 0.0 22:6n-3 17.3 0.0 0.0 0.0 0.0 13.6 0.0 SFA 39.1 22.4 18.5 22.1 37.8 33.3 30.1 MUFA 24.2 16.6 33.5 14.7 51.3 24.9 51.0 PUFA 3.5 60.0 46.3 62.2 9.5 5.2 18.2 LC-PUFA 30.3 0.4 1.5 0.6 0.2 32.0 0.6 n-3 28.7 4.0 6.4 3.4 0.7 35.3 2.6 n-6 5.2 56.5 41.3 59.4 9.1 2.7 16.2

FM fish meal, WF wheat flour, LM lupin meal, WG wheat gluten, PM poultry meal, FO fish oil, PF poultry fat

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Table 3. 2 Experimental diet formulation and composition. All data are g/kg DM unless otherwise stated. Fatty acid data are expressed as a percentage of total fatty acids (%).

F100:

P0 F60: P40

F30: P70

F15: P85

F0: P100

Formulation Fish meal a 150 150 150 150 150 Fish oil b 85 51 25 12 0 Wheat flour c 119 119 119 119 119 Wheat gluten d 85 85 85 85 85 Lupin meal e 100 100 100 100 100 Poultry meal f 455 455 455 455 455 Poultry fat g 0 34 59 72 85 Premix h 5 5 5 5 5 Yttrium oxide i 1 1 1 1 1 Composition Dry matter 908.2 921.7 977.6 977.6 981.3 Crude protein 518.8 536.9 543.8 531.3 539.5 Crude lipid 149.7 151.2 157.0 159.4 161.9 Ash 92.9 90.3 91.3 94.9 93.8 Gross energy (MJ/kg) 21.9 22.4 22.6 22.7 22.6 14:0 4.7 3.4 2.4 1.9 1.4 16:0 21.1 22.0 22.7 22.8 22.9 18:0 5.6 6.1 6.5 6.6 6.7 16:1n-7 7.7 6.8 6.0 5.7 5.4 18:1n-9 24.0 30.0 34.8 36.7 38.9 18:2n-6 8.9 11.6 13.9 14.8 15.6 18:3n-3 1.1 1.4 1.5 1.6 1.7 20:4n-6 0.9 0.8 0.7 0.6 0.5 20:5n-3 8.8 5.9 3.3 2.3 1.2 22:5n-3 1.2 0.9 0.0 0.0 0.0 22:6n-3 7.6 5.4 3.5 2.7 1.8 SFA 33.7 27.1 25.6 25.4 24.9 MUFA 36.9 46.8 50.8 52.3 54.3 PUFA 11.7 14.0 16.0 16.8 17.4 LC-PUFA 17.3 12.1 7.5 5.5 3.5 n-3 19.4 13.7 9.0 7.0 4.7 n-6 10.0 12.4 14.5 15.3 16.2

a Fish meal; Ridley aquafeeds, Narangba, QLD, Australia b Fish (anchovy) oil; Ridley aquafeeds, Narangba, QLD, Australia c Plain wheat flour; Manildra Group, Rocklea, QLD, Australia d Wheat gluten; Manildra Group, Rocklea, QLD, Australia e Lupinus angustifolius cv. Coromup; Coorow Seeds, WA, Australia. f Poultry meal; Ridley aquafeeds, Narangba, QLD, Australia g Poultry fat; Ridley aquafeeds, Narangba, QLD, Australia h Vitamin and mineral premix includes (IU kg-1 or g/kg of premix): vitamin A, 2.5MIU; vitamin D3, 0.25 MIU; vitamin E, 16.7 g; vitamin K3, 1.7 g; vitamin B1, 2.5 g; vitamin B2, 4.2 g; vitamin B3, 25 g; vitamin B5, 8.3; vitamin B6, 2.0 g; vitamin B9, 0.8; vitamin B12, 0.005 g; biotin, 0.17 g; vitamin C, 75 g; choline, 166.7 g; inositol, 58.3 g; ethoxyquin, 20.8 g; copper, 2.5 g; ferrous iron, 10.0 g; magnesium, 16.6 g; manganese, 15.0 g; zinc, 25.0 g i Yttrium oxide; Stanford Materials, Aliso Viejo, California, United States

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3.3 Results

3.3.1. Growth performance and feed utilisation

During the 82 d growth period, the fish responded to the experimental diets, growing

consistent with the predicted model growth (Glencross and Bermudes, 2012).

Survival was 100% in all treatments. No significant differences were observed

among the treatment diets in terms of growth performance (Table 3.3). During the

growing period, there was greater than 2.5-fold increase in weight among the groups

of fish with final fish weights ranging between 545 to 553 g. Similarly, there were no

significant differences in feeding parameters with FCR values ranging from 1.12 to

1.15 (Table 3.3). The diet dry matter, protein, lipid and energy digestibility were also

unaffected by the modified lipid profile of the treatment diets (Table 3.3). The

digestibility of individual fatty acids was not significantly affected by treatment

(Table 3.3).

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Table 3. 3 Growth, feed utilisation and nutrient deposition parameters.

F100:

P0 F60: P40

F30: P70

F15: P85

F0: P100

P SEM

Regression R2, P#

Fish performance Initial (g/fish) 208.8 211.2 208.6 207.1 207.5 1.13 0.04, 0.48 Week-12 (g/fish) 545.0 546.4 553.6 546.6 549.7 4.20 0.01, 0.70 Gain (g/fish) 336.2 335.1 345.0 339.5 342.2 4.08 0.03, 0.57 Growth rate (g/d) 4.1 4.0 4.2 4.1 4.1 0.05 0.03, 0.55 Feed Intake (g/fish) 384.4 386.0 394.6 380.6 382.6 4.54 0.00, 0.93 FCR (feed/gain) 1.14 1.15 1.14 1.12 1.12 0.01 0.11, 0.22 Survival (%) 100.0 100.0 100.0 100.0 100.0 0.00 0.50, 0.10 Diet digestibility (%) Dry matter 57.5 55.3 53.9 56.7 59.1 4.00 0.00, 0.94 Protein 76.2 74.2 74.5 76.2 77.6 2.20 0.00, 0.84 Lipid 93.7 91.7 93.5 92.9 92.4 0.65 0.02, 0.67 Energy 71.7 69.4 68.4 70.6 70.4 2.41 0.00, 0.85 16:0 88.6 86.8 91.1 91.6 89.7 1.17 0.06, 0.45 18:0 81.7 80.4 86.6 88.1 84.5 1.74 0.11, 0.30 18:1n-9 95.0 94.4 96.3 96.4 96.7 0.48 0.22, 0.12 18:2n-6 93.6 93.4 95.5 95.9 97.2 0.78 0.29, 0.07 18:3n-3 96.5 95.3 96.4 97.4 97.8 0.66 0.07, 0.42 20:4n-6 95.0 100.0 97.4 100.0 93.2 1.32 0.00, 0.91 20:5n-3 99.2 98.5 99.4 95.3 97.0 0.82 0.13, 0.25 22:5n-3 100.0 100.0 100.0 100.0 100.0 0.00 0.45, 0.14 22:6n-3 98.0 96.1 96.0 94.9 94.8 0.99 0.14, 0.23 SFA 90.9 89.7 93.0 92.0 90.9 0.86 0.01, 0.72 MUFA 91.5 90.7 93.9 93.1 93.2 0.69 0.14, 0.23 PUFA 94.8 94.1 95.7 96.2 97.2 0.67 0.18, 0.17 LC-PUFA 98.6 97.7 97.6 95.6 95.3 0.89 0.18, 0.17 n-3 98.6 97.3 97.6 95.9 96.4 0.74 0.13, 0.25 n-6 93.9 93.9 95.5 96.1 97.0 0.75 0.25, 0.10 Nutrient deposition (%) Protein 33.5 31.0 33.7 34.2 35.2 0.01 0.04, 0.47 Lipid 64.2 82.1 73.9 87.2 81.5 0.03 0.31, * Energy 36.7 42.1 40.6 42.3 40.1 0.01 0.12, 0.22

P SEM, Pooled standard error of the mean; # Linear regression of all replicates with 1,13 df P < 0.05 *

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When compared to the initial samples the dry matter, lipid and gross energy

content of the carcass of all treatments were numerically higher upon termination of

the experiment (Table 3.4). However, there were no significant differences in the

final whole body composition of the fish fed the treatment diets. In terms of the fatty

acid composition, some significant effects among the dietary treatments were

observed (Table 3.4). The fatty acid composition of the whole body was in most

cases a reflection of the dietary treatments and changed accordingly. DPA was the

only exception to this as it was not detected in the diets containing less than 30% FO,

while whole body DPA levels were maintained at levels similar to that of the initial

fish (R2 = 0.76, P < 0.001). There was a significant difference in whole body ARA

(R2 = 0.47, P < 0.05) and this fatty acid appears to be well conserved compared to the

initial fish. Both EPA and DHA whole body proportions were significantly reduced

by the dietary treatments (R2 = 0.90, P < 0.001 and R2 = 0.76, P < 0.001,

respectively).There was no significant difference in SFA composition despite the

altered dietary profiles.

There were no significant differences in protein or energy retention efficiency

in the whole body among the treatment groups (Table 3.3). However, there was a

slight increase in lipid retention efficiency values with increasing PF. Whole body

retention efficiency of linoleic acid was not significantly affected by increasing

intake and the values ranged between 55% to 86% (y = 0.03x – 0.49, R2 = 0.13, P =

0.55, Figure 3.1a). Similarly, the retention efficiency of 18:3n-3 was not significantly

affected by increasing intake with the retention efficiency values ranging between

45% and 69% (y = 0.65x – 0.10, R2 = 0.65, P = 0.13, Figure 3.1b). There was

disproportionate retention of LC-PUFA’s including arachidonic acid (ARA), EPA

and DHA which are presented in Figures 3.1c-e. The ARA retention efficiency in the

whole body decreased sharply from 74% to 47% with increasing intake while the

dietary intake values of ARA were very low (y = -1.08x + 1.03, R2 = 0.81, P < 0.05).

Similarly, the retention efficiency of EPA decreased from 49% at the lowest dietary

inclusion to 32% at the highest inclusion (y = -0.04x + 0.52, R2 = 0.90, P < 0.05).

The whole body retention efficiency of DHA was 73% at the lowest dietary inclusion

levels then showed a curvilinear decline to around 37% (y = 0.72x-0.44, R2 =0.97, P <

0.05).

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Table 3. 4 Whole body chemical composition of the experimental fish on a live-weight basis. All data are g/kg unless otherwise stated. Fatty acid data are expressed as a percentage of total fatty acids (%).

Initial F100:

P0 F60: P40

F30: P70

F15: P85

F0: P100

P SEM

Regression R2, P#

Dry matter 28.9 33.2 35.7 35.5 35.4 35.2 0.01 0.24, 0.06 Crude protein 20.9 20.3 22.1 21.0 20.6 21.1 0.01 0.58, 0.10 Crude lipid 5.3 9.1 10.6 10.1 11.5 11 0.01 0.58, 0.10 Gross energy (MJ/kg) 6.3 8.1 8.9 8.9 9.1 8.7 0.18 0.15, 0.16 14:0 2.7 4.3 3.6 2.4 2.0 1.6 0.29 0.94, *** 16:0 22.9 23.8 26.1 23.6 23.2 23.6 0.32 0.02, 0.65 18:0 7.3 7.0 7.9 7.3 7.3 7.4 0.10 0.08, 0.36 16:1n-7 5.7 7.5 6.0 4.2 5.7 3.0 0.76 0.01, 0.71 18:1n-9 37.6 32.6 39.6 39.3 40.2 42.5 1.05 0.77, *** 18:2n-6 10.9 8.2 10.1 11.7 12.1 13.2 0.52 0.96, *** 18:3n-3 1.1 0.8 0.9 1.2 1.2 1.4 0.06 0.71, *** 20:4n-6 0.6 0.7 0.5 0.6 0.5 0.5 0.03 0.47, * 20:5n-3 1.7 3.9 2.3 1.9 1.3 0.8 0.36 0.90, *** 22:5n-3 1.0 1.3 0.9 0.9 0.7 0.6 0.09 0.76, *** 22:6n-3 3.8 4.2 2.7 2.7 2.2 1.9 0.33 0.76, *** SFA 34.1 36.6 38.9 34.3 33.3 33.3 0.59 0.30, 0.06 MUFA 44.8 41.8 41.9 44.9 47.2 46.6 0.74 0.76, *** PUFA 13.0 10.2 11.7 13.7 13.9 15.2 0.53 0.91, *** LC-PUFA 7.8 10.7 7.0 6.8 5.4 4.6 0.80 0.80, *** n-3 8.2 11.3 7.7 7.5 6.0 5.2 0.81 0.82, *** n-6 12.5 9.6 11.0 13.1 13.2 14.7 0.53 0.91, ***

P SEM, Pooled standard error of the mean; # Linear regression of all replicates with 1,13 df P < 0.05 *; P < 0.01 **; P < 0.001 ***

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(a)

(c)

(e)

(d)

(b)

Figure 3. 1 Whole-body retention of polyunsaturated fatty acids a) 18:2n-6 (y = 0.03x + 0.49, R2 = 0.13, P = 0.55) and b) 18:3n-3 (y = 0.65x + 0.10, R2 = 0.60, P = 0.13) and whole-body retention of long-chain polyunsaturated fatty acids c) ARA (y = -1.08x + 1.03, R2 = 0.81, P < 0.05) , d) EPA (-0.04x + 0.52, R2 = 0.90, P < 0.05) and e) DHA (y = 0.72x-0.44, R2 = 0.97, P < 0.05).

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3.3.2. Nutrient marginal efficiencies

The marginal efficiencies of nutrient utilisation were calculated using a bioenergetic

approach to determine the discrete effects on nutrient utilisation and maintenance

requirements for juvenile barramundi (Figures 3.2 a-e). The marginal efficiency of

18:2n-6 (k18:2n-6) was determined as 82% (y = 0.82x – 0.03, R2 = 0.75) and the

maintenance requirement estimated at 0.068 g/kg0.9/d. Similarly, the marginal

efficiency of 18:3n-3 (k18:3n-3) was determined as 104% (y = 1.04x – 0.01, R2 = 0.88)

and the maintenance requirement was estimated at 0.012 g/kg0.9/d. The marginal

efficiencies of the LC-PUFA’s were contrasting to those of the PUFA’s. The

marginal efficiency of ARA (kARA) was low at 19% (y = 0.19x + 0.005, R2 = 0.43)

and the regression suggests there was no maintenance requirement for this fatty acid.

Similarly, the marginal efficiencies of EPA and DHA (kEPA and DHA) were also low at

30% (y = 0.30x + 0.0, R2 = 0.95) and 27% (y = 0.27x + 0.01, R2 = 0.95), respectively

and the regression model suggested that there was also no maintenance requirement

for these LC-PUFA’s. A summary of the marginal efficiencies and the intake to gain

ratio of key fatty acids are presented in Table 3.5.

3.3.3. Fillet quality assessment

The consequence of changing dietary lipids in juvenile barramundi was evaluated in

terms of fillet quality using a standard sample of flesh (NQC). There were no

significant differences in macro nutrient composition of the NQC samples (Table

3.6). Overall, the dietary fatty acid profiles were closely reflected in the flesh with

the exception of DPA which was barely present in the diets F100:P0 and F60:P40

and not detected in the other diets. Consequently, some significant differences in

NQC fatty acid composition were observed (Table 3.6). Myristic acid (14:0) was the

only saturate affected showing a reduced concentration with increasing FO

substitution (R2 = 0.80, P < 0.001). Oleic acid (OLA; 18:1n-9) was significantly

increased with FO substitution (R2 = 0.50, P < 0.01). Both 18:2n-6 and 18:3n-3

composition increased with increasing FO substitution (R2 = 0.65, P < 0.001 and R2

= 0.58, P < 0.01, respectively). ARA composition in the fillet did not change;

however, n-3 LC-PUFA (EPA and DHA combined) deposition in the flesh showed

an increasing curvilinear response relative with increasing intake (Figure 3.3).

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Table 3. 5 Summary of marginal efficiencies of specific fatty acids by juvenile barramundi when fed diets with varying blends of fish oil and poultry fat. Fatty acid Efficiency constant k R2 Intake:gain ratio 18:2n-6; Linoleic acid 0.82 0.75 1.2:1 18:3n-3; Linolenic acid 1.04 0.88 1.0:1 20:4n-6; Arachidonic acid 0.19 0.43 5.3:1 20:5n-3; Eicosapentaenoic acid 0.30 0.95 3.3:1 22:6n-3; Docosahexaenoic acid 0.27 0.95 3.7:1

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Table 3. 6 Fillet (NQC) composition on a live-weight basis. All data are g/kg unless otherwise stated. Fatty acid profiles of NQC samples from each treatment are expressed as mg/100g meat.

F100:

P0 F60: P40

F30: P70

F15: P85

F0: P100

P SEM

Regression R2, P#

Dry matter 33.2 35.7 35.5 35.4 35.2 0.01 0.20, 0.10 Crude protein 26.5 28.5 28.3 28.3 27.4 0.01 0.08, 0.30 Crude lipid 4.9 5.2 5.6 6.3 5.4 0.01 0.15, 0.16 Gross energy (MJ/kg) 8.2 8.8 8.9 9.1 8.8 0.13 0.24, 0.06 14:0 4.0 2.9 2.1 1.8 1.5 0.24 0.80, *** 16:0 22.9 23.0 22.4 22.8 23.1 0.13 0.11, 0.22 18:0 7.1 7.4 7.2 7.3 7.4 0.09 0.14, 0.17 16:1n-7 7.1 6.2 5.6 5.4 5.1 0.18 0.15, 0.15 18:1n-9 30.9 34.4 37.8 39.3 40.8 0.96 0.50, ** 18:2n-6 8.4 10.3 11.9 12.6 13.2 0.46 0.65, *** 18:3n-3 0.9 1.1 1.2 1.3 1.2 0.04 0.58, ** 20:4n-6 1.0 0.9 0.8 0.7 0.7 0.03 0.15, 0.15 20:5n-3 5.2 3.7 2.4 1.7 1.0 0.41 0.84, *** 22:5n-3 1.7 1.4 1.1 0.9 0.7 0.10 0.62, *** 22:6n-3 6.2 5.2 4.0 3.4 2.8 0.36 0.61, *** SFA 35.0 34.1 32.4 32.5 32.7 0.35 0.02, 0.57 MUFA 39.5 41.9 44.8 45.9 47.1 0.75 0.38, * PUFA 10.6 12.5 14.1 14.7 15.1 0.45 0.56, ** LC-PUFA 14.2 11.2 8.5 6.7 5.2 0.90 0.71, *** n-3 15.1 12.2 9.4 7.6 5.8 0.93 0.67, *** n-6 9.6 11.5 13.3 13.9 14.5 0.48 0.64, ***

P SEM, Pooled standard error of the mean; # Linear regression of all replicates with 1,13 df P < 0.05 *; P < 0.01 **; P < 0.001 ***

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Figure 3. 2 The linear relationship between the mass-independent intake relative to mass-independent gain (marginal efficiency) of specific fatty acids by juvenile barramundi. For comparative purposes the dotted line indicates the slope of 1.0 (y = x). a) 18:2n-6 (y = 0.82x - 0.03, R2 = 0.75) b) 18:3n-3 (y = 1.04x - 0.01, R2 = 0.88) c) ARA (y = 0.19x + 0.005, R2 = 0.43) d) EPA (y = 0.30x + 0.007, R2 = 0.95) e) DHA (y = 0.27x + 0.01, R2 = 0.95).

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Figure 3. 3 Fillet (NQC) LC-PUFA deposition in juvenile barramundi expressed relative to intake (y = -1.54x2 + 56.33x + 75.23, R2 = 0.99) as mg/100 g meat. By extrapolation the dotted line indicates that a formulation of ~11% total LC-PUFA (EPA and DHA combined) would achieve a fillet composition of 500 mg/100 g.

3.4 Discussion

The benefits of regular consumption of seafood rich in n-3 LC-PUFA are well

known. These fatty acids are implicated in a range of physiological and metabolic

processes and many studies have demonstrated their positive benefit in the

prevention and management of cardio-vascular disease and inflammation (Calder,

2012). The FAO’s guideline to consume a dose of 250 mg/d EPA and DHA is an

achievable yet rarely met target due to the production and subsequent consumption

of the predominant vegetable oils including soybean, palm and canola (FAO, 2010).

This study investigated the potential effects of fish oil substitution with poultry fat in

diets fed to juvenile barramundi and provides empirical support for the development

of a strategy to manage the LC-PUFA content in the fillet. However, in addition to

this objective the study also provides some unique insights into fatty acid metabolism

in this species based on understanding the marginal utilisation of these nutrients and

comparing that with what we know about similar parameters for utilisation of other

nutrients.

This study demonstrated that the growth and feed utilisation of barramundi

was not significantly affected by the complete replacement of fish oil with poultry

fat. Until recently, variable responses to fish oil replacement and fatty acid

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requirement studies have led to further questions being raised about lipid metabolism

in this species (Catacutan and Coloso, 1995; Glencross and Rutherford, 2011;

Morton et al., 2014; Raso and Anderson, 2003; Williams et al., 2006). The fish in

this study achieved a minimum 2.5-fold increase in weight over the twelve week

study period. Experimental duration is of particular interest in the realm of fatty acid

nutrition as the increasing use of alternative oils has a definitive influence on flesh

quality (Robin et al., 2003). The NRC (2011) suggest that 300% or a 3-fold increase

in weight should be respected and a range of other studies suggest different methods

of assessment (Glencross et al., 2003b; Jobling, 2004; Morton et al., 2014; Robin et

al., 2003). Clearly the fish in this study achieved sufficient biological turnover as

evidenced by the whole fish and flesh fatty acid profiles mirroring the diets similar to

that of other studies (Glencross et al., 2014b; Tu et al., 2013; Turchini et al., 2011b).

Moreover, past studies have demonstrated that fatty acid profiles of fish can be

manipulated in as little as two weeks (Castell et al., 1994; Skonberg et al., 1994).

Poultry fat (PF) is a commonly utilised alternative lipid source for aquafeeds

in Australia, having been widely used for over a decade, despite containing little or

no n-3 LC-PUFA. In this study, FO substitution with PF covered a range of LC-

PUFA inclusion from 22.0 to 4.8 g/kg, theoretically surpassing the reported

minimum requirement of 12 g/kg LC-PUFA (Williams et al., 2006). It is noteworthy

that this species is a catadromous, obligate carnivore and the reduced levels of LC-

PUFA fed in this study should probably have induced a range or EFA deficiency

symptoms similar to those previously reported (Catacutan and Coloso, 1995;

Glencross and Rutherford, 2011). Indeed, when other marine carnivorous fish were

fed diets with high levels of FO substitution, this led to growth retardation

(Glencross et al., 2003b; Izquierdo et al., 2005; Montero et al., 2005). We suggest

that the absence of problems seen in the present study may be reflective of the use of

larger fish which had previously been raised on high LC-PUFA diets and therefore

their underpinning n-3 LC-PUFA requirements in the demanding early juvenile

growth phase had already been met and that there was limited subsequent turnover.

Alternatively, it may also be that the actual requirement for EFA by this species is

much lower than previously thought. In this study, the digestibility of lipid and

individual fatty acids were not significantly affected. Further suggesting that despite

the contrasting differences in fatty acid profiles of PF and FO, the diets were digested

by barramundi equally efficiently.

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The LC-PUFA content of the F0:P100 diet was only 3.5% of the total lipid

(equivalent to 4.8 g/kg diet) with this residual LC-PUFA coming from the fish meal

appearing sufficient to maintain biological functions in the fish. The inclusion of

15% fish meal in the present study is based on the findings of Glencross et al.

(2011b) as the use of a fully purified diet containing no fish meal was shown to be a

risky approach and lacks practical application (Tu et al., 2013). In light of this, the

results of this study demonstrate that in terms of growth performance, 100% of the

FO can be effectively replaced by poultry fat in growing barramundi, however,

discrete effects on deposition and marginal efficiencies of specific fatty acids were

apparent.

Bioenergetic models have come a long way to understanding how different

nutrients are deposited in the body of an animal and that macro nutrients such as

protein and lipid have different energetic efficiencies (Bureau et al., 2006). The

individual fatty acids have vastly different metabolic fates and hence are likely to

have different energetic efficiencies. For example, the n-3 and n-6 series

eicosapolyenoic fatty acids are implicated in a competing nature for the synthesis of

the autocrine hormones (Tocher, 2003). Arguably they may also have different

allometric relationships, as do protein and lipid, and this remains to be explored

(Glencross and Bermudes, 2011). In the present study we have relied on the

determined exponent of total lipid utilisation of LW0.90 to define the energetic

relationships of the different fatty acids, though we acknowledge that this is still an

assumption.

The present study demonstrated that the marginal efficiencies of LC-PUFA

(kDHA, kEPA and kARA) were 0.27, 0.30 and 0.19, respectively and the PUFA (k18:3n-3

and k18:2n-6) were significantly higher at 1.04 and 0.82, respectively. At first glance,

the examination of the retention and marginal efficiencies of LC-PUFA in this study

gives further evidence to the hypothesis that barramundi are unable to elongate and

desaturate precursor FA to form essential LC-PUFA (Mohd-Yusof et al., 2010). This

is evidenced by the direct accumulation of those fatty acids (18:2n-6 and 18:3n-3) in

a manner directly reflective of their intake levels, indicating no loss of these nutrients

from what was consumed.

Clearly in the case of DHA, EPA and ARA, retention efficiency in the whole

body decreased as dietary intake of those nutrients increased (Figure 1c-e). In

agreement, the marginal efficiencies of these nutrients were low compared to other

the shorter-chain and more saturated FA. These responses are likely due to the

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physiological requirements of these nutrients in growing barramundi and suggest that

they were catabolised into other forms or used for energy. The strong conservation of

DHA in the whole body at low dietary intakes may be indicative of a priority for

retaining this nutrient (essentiality) as the organism attempts to retain what it has to

sustain necessary functions, but from our data it is implied that these necessary

functions require a transformation of the nutrient into another metabolite or energy

(Tocher, 2003). However, by extrapolating the marginal efficiency of the DHA

regression it appears as if there is no maintenance requirement for LC-PUFA in the

barramundi. This is contrasting to that identified for many other nutrients (and

energy), each of which have clear maintenance requirement levels.

This observation may be partly explained by the extrapolation method in

itself which has been found to slightly underestimate maintenance requirements

compared to a factorial approach (Bureau et al., 2006). However, it is also likely that

the dietary formulations in this study all supplied LC-PUFA in excess or at least

beyond the point of sensitivity for this species. Given that the barramundi is clearly

very effective at selective LC-PUFA retention it probably has a very low requirement

for these specific fatty acids. As discussed earlier, we are also assuming that the

relationships of the different fatty acids to animal live-weight is consistent with that

of total lipid (LW0.90), though this needs to be further validated and this, and other

further evidence may still be required to draw conclusions on the use of this method

to estimate baseline metabolic requirements of individual LC-PUFA.

Recent fatty acid studies have demonstrated similar metabolic responses for a

range of species. In Atlantic salmon (Glencross et al., 2014b; Torstensen et al.,

2004), barramundi (Glencross and Rutherford, 2011) and gilthead seabream

(Montero et al., 2001) there was a curvilinear decline in the retention efficiency of

DHA in response to increasing DHA level in the diet. In contrast, DHA and EPA

retention efficiency in the Atlantic cod (Gadus morhua) increased in response to

increasing dietary supply (Hansen et al., 2008) . In the latter example, the authors

argued that DHA was probably used as a substrate for energy production at lower

dietary intake. Many studies have demonstrated that despite up regulation of genes

involved in FA synthesis pathways, most fish species are unable to completely

compensate for a lack of dietary LC-PUFA (Alhazzaa et al., 2011b; Betancor et al.,

2014; Francis et al., 2007; Geay et al., 2010; Tu et al., 2013). Interestingly in this

study, the reduced retention of EPA may be attributable in part, to the apparent

concomitant appearance of DPA via elongation of C20 to C22. This is a likely

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scenario as the barramundi attempts to synthesise DHA from dietary precursor fatty

acids in response to the treatment diets. However, to achieve this goal it requires a

Δ5 desaturation enzyme that probably does not exist in the species hence the building

up of DPA (Mohd-Yusof et al., 2010). Another possible explanation for the

accumulation of DPA may be that the animal is β-oxidising available DHA to EPA

for eicosanoid production and DPA is an intermediate in this process.

Moreover, the high retention and low marginal efficiency of ARA and EPA

could be related to the requirement for eicosanoid production under inadequate or

stressful dietary conditions. The eicosanoids particularly the n-6 series are implicated

in a range of physiological roles such as ion transfer and osmoregulation (Castell et

al., 1994) and the n-3 series eicosanoids have an anti-inflammatory role (Wall et al.,

2010). In addition, the majority of eicosanoid products are derived from ARA in fish

adding to the idea that ARA may be implicated in a range of biological processes in

barramundi (Henderson, 1996; Tocher, 2003). Few studies have investigated ARA

metabolism in barramundi, however, current evidence suggests that ARA may be

implicated in reduced growth and increased sub-clinical signs of essential fatty acid

deficiency (Glencross and Rutherford, 2011). In agreement, the results of the present

study emphasized the relative importance of ARA and future work in this area is

warranted.

Much awareness is now placed on the consumption of seafood, rich in LC-

PUFA, in an attempt to ameliorate a range of largely preventable diseases (Calder,

2012; Wall et al., 2010). Many nutritional feeding studies have focused on the

replacement of FO with alternative oils and also how this translates to the flesh

(Sales and Glencross, 2011; Turchini et al., 2009). Past studies have demonstrated

that fish fillet adiposity can be altered by the use of common vegetable oils (Bell et

al., 2002); however, the same response in this study was not found with poultry fat.

Fillet lipid levels remained constant among the treatment groups and the fillet fatty

acid profiles were largely reflective of the diets. The fatty acids deposited in the flesh

of barramundi were clearly proportional to their respective diet with few exceptions

which is typical of most fish (Turchini et al., 2009).

Given the limited ability of barramundi to desaturate and elongate precursor

FA to EPA and then DHA it was not surprising that these FA were strongly related to

the dietary composition. However, the relationship was best described as curvilinear

and the fillet concentration of LC-PUFA plateaued as the dietary concentration

exceeded 6% (Figure 3). There was a linear decrease in the fillet EPA concentration

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with increasing replacement of the fish oil that appeared to be related to a slight

increase in DPA relative to the diet. The accumulation of DPA in the fillet is likely to

be a result of chain length modification in the liver followed by transport to the

adipose tissue for storage or eventual secondary processing, however, the effect was

minimal. Similarly, the fillet DHA concentration also decreased linearly with

increasing fish oil replacement, however, it was selectively retained in the meat at

levels higher than the dietary supply. Similarly, studies have shown that fillet DHA

levels in Atlantic salmon (Bell et al., 2001; Bell et al., 2002), European seabass

(Mourente and Bell, 2006), gilthead sea bream (Izquierdo et al., 2005) and Murray

cod (Turchini et al., 2011b) can be elevated relative to the diet. Possible mechanisms

underpinning this selective retention among species may be attributable to the high

specificity of fatty acyl transferases for DHA (Bell et al., 2001) and reduced

catabolism due to the complex peroxisomal β-oxidation required for the DHA

molecule (Tocher, 2003). Furthermore, this study showed that OLA and palmitic

acid (16:0) dominated within the flesh and these FA are known to be heavily

oxidised as energy substrates, potentially promoting more efficient accumulation of

other FA (Codabaccus et al., 2012; Turchini et al., 2011b).

By extrapolation, the results of this study allow the estimation of fillet FA

composition of barramundi (Figure 3). These observations are of practical use for

predicting the outcome of feeding diets with reduced levels of FO to barramundi and

promoting the most efficient use of the FO resource. It is estimated that feeding

barramundi with approximately 11% LC-PUFA would result in a fillet concentration

of 500 mg/100 g. The FAO recommend a minimum daily consumption of 250 mg of

n-3 LC-PUFA (FAO, 2010). In recognition of the FAO guideline, a 350 g fillet

portion would theoretically meet the weekly needs of adult consumers, aiming to

maintain a healthy and balanced diet.

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4.0 Effect of dietary saturated and monounsaturated fatty acids in

juvenile barramundi Lates calcarifer

Adapted from

Salini, M.J., Turchini, G.M., Glencross, B.G., 2015. Effect of dietary saturated and

monounsaturated fatty acids in juvenile barramundi Lates calcarifer. Aquac. Nutr.

doi: 10.1111/anu.12389

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4.1 Aims

Consistent responses of a range of fish species indicate that SFA and MUFA

provided in surplus are heavily oxidised as substrates for energy, effectively sparing

LC-PUFA for biological needs and deposition. Likewise, it is unfavourable to

provide excess n-3 LC-PUFA, typical of FO, as these FA can also be readily β-

oxidised (Torstensen et al., 2000; Turchini et al., 2013). Recent studies have shown

that barramundi are capable of utilising poultry oil, characterised by high MUFA

content, however, to what extent SFA are preferentially utilised or able to ‘spare’

LC-PUFA remains unclear (Salini et al., 2015a). The proposed experiment examined

the effect of diets containing a 2:1 or 1:2 ratio of SFA to MUFA in the lipid as it was

hypothesised that these fatty acid classes would be metabolised differently. The

digestibility of the diets was also measured and mass-balance computations used to

estimate the fatty acid metabolism in vivo.

4.2 Materials and methods

The methodology used in the present experiment is detailed in the section 2.0

General methodology. Ethical clearance was approved for the experimental

procedures by the CSIRO Animal Ethics Committee (Application A12/2013). The

chemical composition of the main dietary ingredients is presented in Table 4.1. The

formulation and chemical composition of the three diets are presented in Table 4.2.

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Pa

ge

Tab

le 4

. 1 C

hem

ical

com

posi

tion

of k

ey in

gred

ient

s, al

l val

ues a

re p

rese

nted

as g

/kg

DM

unl

ess o

ther

wis

e st

ated

.

DF

Fish

m

eal

Poul

try

mea

l So

y is

olat

e

Whe

at

glut

en

Whe

at

flour

C

asei

n

Whe

at

star

ch

Fish

oi

l O

live

oil

Palm

O

il

Palm

Fl

ake

Com

posi

tion

Dry

mat

ter (

g/kg

) 98

4 95

8 95

8 92

7 83

9 92

4 83

6 99

2 98

7 10

0 99

Prot

ein

789

641

895

823

112

870

5 4

4 3

4

Ash

16

3 13

8 46

1

6 11

3

1 N

D

ND

N

D

Li

pid

46

151

57

121

22

5 N

D

956

973

963

986

C

HO

# 1

70

2 55

86

0 11

3 99

2 39

23

34

10

Gro

ss e

nerg

y (M

J/kg

) 18

.9

20.4

21

.8

21.2

15

.3

21.9

14

.5

39.3

39

.5

39.5

39

.3

Fatty

aci

ds (%

) ^

16:0

25

.8

25.4

17

.8

- -

- -

22.9

9.

9 51

.9

46.2

18:0

8.

7 8.

6 4.

5 -

- -

- 5.

1 3.

0 4.

6 51

.3

18

:1

15.5

43

.8

25.1

-

- -

- 18

.6

73.8

34

.6

0.4

18

:2n-

6 1.

7 11

.0

46.5

-

- -

- 2.

0 11

.0

6.7

ND

18:3

n-3

0.8

1.0

5.1

- -

- -

1.0

1.0

ND

N

D

20

:4n-

6 2.

5 0.

6 N

D

- -

- -

1.5

ND

N

D

ND

20:5

n-3

9.0

0.5

ND

-

- -

- 11

.3

ND

N

D

ND

22:5

n-3

2.2

ND

N

D

- -

- -

2.1

ND

N

D

ND

22:6

n-3

19.9

N

D

ND

-

- -

- 14

.2

ND

N

D

ND

SFA

39

.8

36.1

22

.6

- -

- -

36.4

13

.4

58.6

99

.6

M

UFA

22

.2

50.8

25

.8

- -

- -

29.1

74

.6

34.7

0.

4

C18

PUFA

3.

4 12

.0

51.6

-

- -

- 4.

9 12

.0

6.7

ND

LC-P

UFA

34

.5

1.2

ND

-

- -

- 29

.7

ND

N

D

ND

n-3

32

.7

1.6

5.1

- -

- -

30.5

1.

0 N

D

ND

n-6

5.

2 11

.6

46.5

-

- -

- 4.

1 11

.0

6.7

ND

# C

HO

, car

bohy

drat

e ca

lcul

ated

by

diff

eren

ce (e

g. C

HO

= 1

000

– (p

rote

in +

lipi

d +

ash)

^

All

fatty

aci

ds a

re p

rese

nted

as a

per

cent

age

of th

e to

tal f

atty

aci

ds. Q

uant

itativ

e da

ta c

an b

e ob

tain

ed b

y m

ultip

lyin

g th

e to

tal F

A (m

g/g

lipid

) by

spec

ific

fatty

aci

ds (%

). 1

8:1,

sum

of 1

8:1n

-7, 1

8:1n

-9 c

is, 1

8:1n

-9 tr

ans;

satu

rate

d fa

tty a

cids

(SFA

), su

m o

f 12:

0, 1

4:0,

16:

0, 1

8:0,

20:

, 22:

0, 2

4:0;

m

onou

nsat

urat

ed fa

tty a

cids

(MU

FA),

sum

of1

4:1n

-5, 1

6:1n

-7, 1

8:1n

-7, 1

8:1n

-9 (c

is a

nd tr

ans)

, 20:

1n-7

, 20:

1n-9

, 22:

1n-9

, 24:

1n-9

; pol

yuns

atur

ated

fa

tty a

cids

(PU

FA),

sum

18:

2n-6

(cis

and

tran

s), 1

8:3n

-6, 1

8:3n

-3, 1

8:4n

-3; l

ong

chai

n po

lyun

satu

rate

d fa

tty a

cids

(LC

-PU

FA),

sum

20:

2n-6

, 20:

3n-

6, 2

0:4n

-6, 2

2:4n

-6, 2

-:3n-

3, 2

0:5n

-3, 2

2:5n

-3, 2

2:6n

-3; n

-3 a

nd n

-6, s

um o

f om

ega

3 an

d 6

PU

FA a

nd L

C-P

UFA

.

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Table 4. 2 Formulation and composition of experimental diets. All values are g/kg DM unless otherwise stated.

CTRL-D (Fish oil)

SFA-D (Palm oil)

MUFA-D (Olive oil)

Formulation DF Fish meal a 150 150 150 Poultry meal a 150 150 150 Soy protein isolate b 150 150 150 Wheat gluten b 150 150 150 Wheat flour b 109 109 109 Casein c 100 100 100 Pregelled wheat starch b 80 80 80 DL-Methionine c 10 10 10 Di-calcium phosphate 10 10 10 Pre-mix vitamins and minerals d 8 8 8 Yttrium oxide e 1 1 1 Fish oil a 82 41 41 Olive oil f 0 0 41 Palm Oil f 0 15 0 Palm Flake f 0 26 0 Composition as analysed Dry matter (g/kg) 940 952 979 Protein 598 601 585 Ash 64 63 60 Lipid 126 137 135 CHO # 204 192 217 Gross energy (MJ/kg DM) 21.5 21.6 22.2 Fatty acids (%) ^ Total FA (mg/g lipid) 801.7 734.7 717.4 16:0 22.9 32.0 18.4 18:0 5.5 16.1 4.8 18:1 22.7 20.6 42.6 18:2n-6 10.0 10.5 13.3 18:3n-3 1.3 1.0 1.3 20:4n-6 1.2 0.7 0.7 20:5n-3 8.1 4.1 4.0 22:5n-3 1.6 0.9 0.9 22:6n-3 10.6 5.4 5.4 SFA 34.5 51.8 26.4 MUFA 31.3 25.0 47.3 C18PUFA 12.7 12.1 15.3 LC-PUFA 21.5 11.0 10.9 n-3 22.9 12.0 12.2 n-6 11.3 11.1 14.0

# CHO, carbohydrate calculated by difference (eg. CHO = 1000 – (protein + lipid + ash). ^ refer to Table 4.1 for details. a Ridley aquafeeds, Narangba, QLD, Australia b Manildra Group, Rocklea, QLD, Australia c Bulk Powders, www.bulkpowders.com.au d Vitamin and mineral premix (IU kg-1 or g/kg of premix): vitamin A, 2.5MIU; vitamin D3, 0.25 MIU; vitamin E, 16.7 g; vitamin K3, 1.7 g; vitamin B1, 2.5 g;

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vitamin B2, 4.2 g; vitamin B3, 25 g; vitamin B5, 8.3; vitamin B6, 2.0 g; vitamin B9, 0.8; vitamin B12, 0.005 g; biotin, 0.17 g; vitamin C, 75 g; choline, 166.7 g; inositol, 58.3 g; ethoxyquin, 20.8 g; copper, 2.5 g; ferrous iron, 10.0 g; magnesium, 16.6 g; manganese, 15.0 g; zinc, 25.0 g e Yttrium oxide; Stanford Materials, Aliso Viejo, California, United States f Sydney Essential Oil Co. (Sydney, NSW, Australia)

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4.3 Results

4.3.1 Growth and feed utilisation

During the 56 d growth assay, the fish in all treatments responded readily to the

experimental diets and growth in the CTRL-D group was consistent with the

predicted model growth, achieving 106% of the modelled potential (Glencross and

Bermudes, 2012). Live-weight measurements were conducted after four weeks of

feeding and then again after eight weeks and although there was a tendency towards

lower growth in the SFA-D and MUFA-D fish at both time points, there were no

significant differences (Table 4.3). The same trend was observed in terms of daily

feed intake and growth rate with no significant differences and there was no

difference in FCR values (Table 4.3). There were no differences in terms of survival

with only one fish that died and was removed from the system over the term of the

experiment (Table 4.3).

The apparent digestibility of macro nutrients and specific fatty acids was

affected by the diets (Table 4.4). Both dry matter (DM) and lipid were significantly

less digestible in the SFA-D fed group of fish. There were no significant differences

in either protein or gross energy (GE) digestibility among the treatments (Table 4.4).

There were no significant differences in the digestibility of individual and total LC-

PUFA among the diets, each showing almost complete digestion in most cases.

Similarly, there were no significant differences in the digestibility of individual and

total PUFA and 18:1. However, the saturated fatty acids were significantly affected

with 18:0 and 16:0 being less digestible in the SFA-D fed fish compared to the other

treatments. The total SFA digestibility was also significantly reduced in the SFA-D

fed fish (Table 4.4).

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Table 4. 3 Growth performance and feed utilisation of juvenile barramundi fed experimental diets for eight weeks. All data (n=3 per treatment) are presented as mean ± SEM.

CTRL-D SFA-D MUFA-D TEST ^ Week 0 weight (g) 46.9 ± 0.1 47.3 ± 0.2 47.1 ± <0.1 F=2.2, P=0.20 Week 4 weight (g) 139.2 ± 1.5 135.3 ± 7.8 136.0 ± 3.0 F=0.9, P=0.45 Week 8 weight (g) 238.3 ± 1.2 231.2 ± 9.0 230.9 ± 6.2 F=0.4, P=0.66 Feed intake (g/fish) 209.6 ± 2.7 202.4 ± 5.0 200.7 ± 4.9 F=0.6, P=0.58 Growth rate (g/fish/d) 3.4 ± <0.1 3.3 ± 0.2 3.3 ± 0.1 F=0.5, P=0.65 FCR 1.10 ± <0.1 1.12 ± <0.1 1.09 ± <0.1 F=2.0, P=0.21 Survival (%) 98.0 ± 0.1 100.0 ± 0.0 100.0 ± 0.0 F=1.0, P=0.42 Protein retention (%) 34.1 ± 1.1 29.8 ± 1.9 32.5 ± 0.9 F=2.5, P=0.16 Lipid retention (%) 48.6 ± 4.5 40.2 ± 1.7 45.9 ± 0.7 F=2.4, P=0.17 Energy retention (%) 37.8 ± 0.6a 33.5 ± 1.0b 34.4 ± 0.3b F=10.1*

Values <0.1 are reported as <0.1. ^ One-way ANOVA, DF 2,6, post-hoc Tukey’s HSD. P<0.05 *. Superscript letters indicate different levels of significance between treatment diets, percentage data were arcsine transformed prior to analysis.

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Table 4. 4 Apparent digestibility coefficients of macro nutrients and specific fatty acids of experimental diets fed to juvenile barramundi. All data (n=3 per treatment) are reported as apparent digestibility percentage (%)

CTRL-D SFA-D MUFA-D TEST ^ Macro nutrient digestibility (%) Dry matter 64.3 ± 1.6ab 60.3 ± 1.5b 69.4 ± 0.2a F=9.6* Protein 91.1 ± 0.4 92.0 ± 1.2 92.1 ± 1.8 F=0.2, P=0.85 Lipid 91.0 ± 0.9a 73.7 ± 2.6b 92.9 ± 1.4a F=21.8** Gross energy 87.3 ± 0.4 82.4 ± 3.3 89.2 ± 2.0 F=1.6, P=0.31 Fatty acid digestibility (%) 16:0 82.1 ± 1.7a 59.2 ± 3.8b 86.6 ± 2.1a F=17.7* 18:0 77.5 ± 4.1a 42.4 ± 5.4b 82.1 ± 3.2a F=15.5* 18:1 92.4 ± 0.3 89.2 ± 1.5 94.3 ± 1.2 F=3.6, P=0.12 18:2n-6 96.0 ± 0.1 94.3 ± 0.8 96.3 ± 1.1 F=1.5, P=0.33 18:3n-3 98.6 ± 1.4 100.0 ± 0.0 97.7 ± 0.8 T=0.6, P=0.60 20:4n-6 100.0 ± 0.0 100.0 ± 0.0 100.0 ± 0.0 N/A 20:5n-3 99.1 ± <0.1 100.0 ± 0.0 98.6 ± 0.5 T=0.9, P=0.45 22:5n-3 100.0 ± 0.0 100.0 ± 0.0 100.0 ± 0.0 N/A 22:6n-3 98.5 ± 0.2 100.0 ± 0.0 97.3 ± 1.0 T=1.1, P=0.35 SFA 82.9 ± 2.0a 55.6 ± 4.2b 86.4 ± 2.2a F=18.3** MUFA 92.9 ± 0.5 90.0 ± 1.3 94.3 ± 1.2 F=2.9, P=0.17 C18PUFA 96.7 ± 0.1 95.0 ± 0.7 96.6 ± 1.0 F=1.2, P=0.38 LC-PUFA 98.9 ± 0.1 100.0 ± 0.0 98.1 ± 0.7 T=1.1, P=0.40 n-3 98.9 ± <0.1 100.0 ± 0.0 98.1 ± 0.7 T=1.2, P=0.36 n-6 96.4 ± 0.1 94.6 ± 0.8 96.5 ± 1.1 F=1.5, P=0.32

Values <0.1 are reported as <0.1. ^ P<0.05*, P<0.01**, P<0.001***; One-way ANOVA, DF 2,6, post-hoc Tukey’s HSD; T-test, DF 4, was used to test two variables; Superscript letters indicate different levels of significance between treatment diets, percentage data were arcsine transformed prior to analysis.

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4.3.2 Biochemical analysis

The whole-body DM, protein and lipid composition on a wet weight basis was not

significantly affected by the diets; however, the GE was significantly lower in the

SFA-D fed fish (Table 4.5). Whole-body total fatty acids were not significantly

different; however, there were some significant differences between the specific fatty

acids. Among the LC-PUFA the whole-body 22:6n-3 and 22:5n-3 was significantly

higher in the CTRL-D fish compared to the MUFA-D fish. The whole-body 18:2n-6

was significantly highest in the MUFA-D and lowest in the CTRL-D (Table 4.5).

The whole-body 18:1 was significantly highest in the MUFA-D fed fish whereas

18:0 and 16:0 were lowest in the MUFA-D fed (Table 4.5). The total LC-PUFA and

the total n-3 fatty acids were significantly lowest in the MUFA-D fed fish (Table

4.5).

The liver fatty acid composition was affected in a similar fashion to that of

the whole-body where 22:6n-3, 22:5n-3, 20:5n-3 and 20:4n-6 had significantly

higher composition in the CTRL-D fed fish. However, there were no significant

differences among the MUFA-D or SFA-d diets (Table 4.5). There was no

significant difference in PUFA composition of the liver. The total LC-PUFA and n-3

composition were significantly higher in the CTRL-D fish and there was no

significant difference in n-6 composition of the liver (Table 4.5).

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85 |

Pa

ge

Tab

le 4

. 5 W

hole

bod

y co

mpo

sitio

n (n

=3 p

er tr

eatm

ent,

g/kg

live

bas

is).

Who

le b

ody

and

liver

fatt

y ac

id d

ata

(n=3

per

trea

tmen

t, %

tota

l).

Initi

al

CTR

L-D

SF

A-D

M

UFA

-D

TEST

^

Who

le b

ody

com

posi

tion

Dry

mat

ter

265

± 0.

4 32

9 ±

0.5

318

± 0.

3 32

4 ±

0.3

F=2.

1, P

=0.2

1

Prot

ein

188

± 0.

5 20

6 ±

0.7

191

± 0.

8 20

0 ±

0.6

F=1.

2, P

=0.3

6

Lipi

d 51

± 0

.4

95 ±

0.6

91

± 0

.2

94 ±

0.2

F=

0.3,

P=0

.73

G

ross

ene

rgy

(MJ/

kg)

61 ±

0.2

84

± 0

.2a

77 ±

0.1

b 79

± <

0.1ab

F=

8.0*

W

hole

bod

y fa

tty a

cids

(%) #

Tota

l FA

(mg/

g lip

id)

681.

0 ±

35.1

61

6.6

± 19

.2

665.

7 ±

68.1

64

7.7

± 44

.7

F=0.

4, P

=0.6

9

16:0

26

.1 ±

0.2

26

.9 ±

0.5

a 28

.0 ±

0.2

a 22

.4 ±

0.1

b F

=74.

3***

18:0

7.

8 ±

0.2

7.4

± 0.

1b 9.

9 ±

0.2c

6.4

± <0

.1a

F=1

48.8

***

18

:1

37.9

± 0

.8

30.1

± 0

.5a

30.9

± 0

.2a

41.7

± 0

.1b

F=37

1.0*

**

18

:2n-

6 9.

7 ±

0.3

8.8

± 0.

2a 10

.2 ±

0.2

b 11

.0 ±

0.1

c F

=37.

4***

18:3

n-3

1.0

± 0.

1 1.

0 ±

<0.1

1.

0 ±

<0.1

1.

1 ±

<0.1

F

=3.3

, P=0

.11

20

:4n-

6 0.

4 ±

0.0

0.7

± <0

.1a

0.5

± <0

.1b

0.5

± <0

.1b

F=14

.7**

20:5

n-3

1.4

± 0.

1 3.

7 ±

0.3a

2.6

± 0.

1b 2.

2 ±

0.1b

F=1

3.1*

*

22:5

n-3

0.8

± 0.

0 1.

6 ±

0.1a

1.3

± 0.

1ab

1.2

± <0

.1b

F=5

.3*

22

:6n-

3 2.

1 ±

0.2

5.5

± 0.

6a 4.

3 ±

0.2ab

3.

8 ±

<0.1

b F

=6.1

*

SFA

38

.5 ±

0.2

39

.3 ±

0.7

a 41

.4 ±

0.4

a 31

.9 ±

<0.

1b F=

102.

4***

MU

FA

45.7

± 0

.5

37.7

± 0

.7a

36.6

± 0

.1a

46.6

± 0

.1b

F19

8.1*

**

C

18PU

FA

11.0

± 0

.1

11.7

± 0

.3a

13.2

± 0

.3b

13.9

± 0

.1b

F=26

.6**

LC-P

UFA

4.

7 ±

0.2

11.4

± 1

.1a

8.8

± 0.

4a 7.

6 ±

0.1b

F=7.

7*

n-

3

4.3

± 0.

0 11

.9 ±

1.2

a 9.

3 ±

0.4a

8.2

± 0.

1b F=

7.0*

n-6

11

.4 ±

0.1

11

.2 ±

0.2

a 12

.7 ±

0.2

b 13

.4 ±

0.1

b F

=38.

1***

Li

ver f

atty

aci

ds (%

) #

16

:0

27.8

± 0

.4

30.8

± 0

.4ab

33

.7 ±

0.7

b 27

.6 ±

1.3

a F=

12.9

**

18

:0

11.5

± 0

.2

10.6

± 0

.2a

13.9

± 0

.4b

9.8

± 0.

8a F

=17.

5**

18

:1

34.8

± 0

.3

31.1

± 0

.1a

33.3

± 0

.8a

39.8

± 0

.6b

F=5

9.3*

**

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86 |

Pa

ge

18

:2n-

6 6.

4 ±0

.2

4.8

± 0.

2 4.

3 ±

0.6

6.9

± 1.

2 F=

3.0,

P=0

.12

18:3

n-3

0.6

± 0.

0 0.

5 ±

<0.1

0.

4 ±

0.1

0.6

± 0.

2 F=

1.5,

P=0

.29

20:4

n-6

0.7

± 0.

0 0.

8 ±

<0.1

a 0.

5 ±

<0.1

b 0.

5 ±

<0.1

b F

=37.

4***

20:5

n-3

1.7

± 0.

1 2.

7 ±

0.1a

1.3

± 0.

1b 1.

5 ±

0.3b

F=1

8.0*

*

22:5

n-3

1.1

± 0.

1 1.

4 ±

0.1a

0.7

± 0.

1b 0.

9 ±

0.1b

F=1

4.4*

*

22:6

n-3

4.4

± 0.

1 4.

8 ±

0.1a

2.7

± 0.

2b 2.

8 ±

0.3b

F=1

5.0*

*

SFA

42

.9 ±

0.3

45

.5 ±

0.5

ab

50.5

± 0

.9b

40.5

± 1

.8a

F=17

.4**

MU

FA

40.0

± 0

.3

37.9

± 0

.3a

38.2

± 0

.7a

44.8

± 0

.6b

F=48

.9**

*

C

18PU

FA

8.5

± 0.

1 6.

2 ±

0.2

5.5

± 0.

7 8.

4 ±

1.2

F=3.

4, P

=0.1

0

LC

-PU

FA

8.6

± 0.

1 10

.4 ±

0.1

a 5.

7 ±

0.4b

6.3

± 0.

7b F

=29.

6***

n-3

8.

6 ±

0.1

9.7

± 0.

1a 5.

6 ±

0.5b

6.1

± 0.

9b F

=17.

6**

n-

6

8.5

± 0.

2 6.

8 ±

0.2

5.7

± 0.

7 8.

6 ±

1.0

F=3

.9, P

=0.0

8 V

alue

s <0.

1 ar

e re

porte

d as

<0.

1.

^ P<

0.05

*, P

<0.0

1**,

P<0

.001

***;

One

-way

AN

OV

A, D

F 2,

6, p

ost-h

oc T

ukey

’s H

SD; S

uper

scrip

t let

ters

indi

cate

diff

eren

t lev

els o

f sig

nific

ance

be

twee

n tre

atm

ent d

iets

, per

cent

age

data

wer

e ar

csin

e tra

nsfo

rmed

prio

r to

anal

ysis

.. # R

efer

to T

able

1 fo

r det

ails

.

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4.3.3 Mass-balance computations

There were no significant differences in protein or lipid retention, however, there

was significantly higher energy retention in the CTRL-D fish (Table 4.3). There was

significantly higher β-oxidation of specific n-3 series fatty acids (22:6n-3, 20:5n-3

and 18:4n-3) and n-6 series fatty acids (20:4n-6) in the CTRL-D diet compared to the

other treatment diets (Table 4.6). There was no recorded β-oxidation for any of the

dominant saturates (including 12:0, 14:0, 16:0 and 18:0); however, there was a

significant increase in β-oxidation of n-7 series FA (16:1n-7 and 18:1n-7) in the

CTRL-D diet compared to the other treatment diets (not shown). There was a

significant increase in the β-oxidation of 18:1 fatty acids in the MUFA-D diet

compared to the other treatment diets (Table 4.6).

There was significantly higher fatty acid de novo production of 12:0

(neogenesis) in the MUFA-D fed fish compared to the other treatment diets (Table

6). The recorded elongation activity of 14:0 was significantly higher in the CTRL-D

and MUFA-D fed fish while the elongation of 16:0 was highest in the CTRL-D and

SFA-D fed fish. Elongation of 20:5n-3 to 22:5n-3 was only recorded in the fish fed

the SFA-D and MUFA-D diets and there was no significant difference (Table 4.6).

The Δ-9 desaturation activity was significantly highest in the SFA-D fed fish

followed by the control fed fish and there was none recorded in the MUFA-D fed

fish (Table 4.6). There was no Δ-5 or Δ-6 desaturation activity detected in any of the

diet treatments (data not presented).

Relative to the total intake of specific fatty acids, there was a significantly

greater proportion of total LC-PUFA deposited in the SFA-D and MUFA-D fed fish;

however, there was no difference between these two groups (Table 4.7). Likewise,

there was proportionally less β-oxidation in the SFA-D and MUFA-D fish; however,

there was no difference between these two groups (Table 4.7). There was only a

minor proportion of the consumed LC-PUFA converted or excreted in the groups of

fish.

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Table 4. 6 Whole-body fatty acid mass balance computations of β-oxidation, elongation and desaturation activity of juvenile barramundi fed experimental diets for eight weeks. All data (n=3 per treatment) are reported on a nmol/g fish/d basis.

ND, not detected, N/A, not analysed, values <0.1 are reported as <0.1. # Computations following Turchini et al (2007). Refer to Table 4.1 for details. ^ P<0.05*, P<0.01**, P<0.001***; One-way ANOVA, DF 2,6, post-hoc Tukey’s HSD; T-test, DF 4, was used to test two variables. Superscript letters indicate different levels of significance between treatment diets, percentage data were arcsine transformed prior to analysis.

CTRL-D SFA-D MUFA-D TEST ^ β-oxidation # 16:0 ND ND ND N/A 18:0 ND ND ND N/A 18:1 54.0 ± 2.8a 7.7 ± 3.9a 580.4 ± 48.6b F=127.6*** 18:2n-6 298.3 ± 16.8 312.5 ± 27.4 240.5 ± 14.5 F=3.5, P=0.09 18:3n-3 ND ND ND N/A 20:4n-6 64.3 ± 3.3a 25.8 ± 1.3 b 27.6 ± 0.7b F=108.0*** 20:5n-3 482.9 ± 23.9a 183.7 ± 12.8b 167.7 ± 4.8b F=125.0*** 22:5n-3 25.7 ± 9.9 ND ND N/A 22:6n-3 631.3 ± 50.9a 220.5 ± 17.3b 187.9 ± 3.7b F=63.0*** SFA ND ND ND N/A MUFA 348.4 ± 12.9b 38.5 ±13.8c 639.9 ± 60.9a F=69.8*** C18PUFA 558.1 ± 32.0a 382.9 ± 44.0b 492.7 ± 19.8a F=7.3* LC-PUFA 1623.6 ± 115.5a 574.1 ± 37.9b 508.6 ± 15.4b F=78.4*** n-3 1616.3 ± 116.4a 560.1 ± 38.3b 494.7 ± 15.1b F=78.2*** n-6 565.4 ± 31.1a 396.9 ± 43.6b 506.6 ± 20.1a F=7.1* Neogenesis # 12:0 188.3 ± 31.6a 166.0 ± 29.8a 312.3 ± 22.6b F=7.7* Elongation # 12:0 202.6 ± 28.8 184.9 ± 29.9 285.5 ± 22.4 F=3.1, P=0.12 14:0 350.8 ± 30.0b 241.4 ± 30.2a 363.7 ± 20.0b F=6.1* 16:0 216.8 ± 17.7b 235.9 ± 15.6b 107.2 ± 3.6a F=25.4** 20:5n-3 ND 13.9 ± 4.8 12.9 ± 1.1 T=0.5, P=0.55 Δ-9 desaturation # 18:0 98.0 ± 22.7b 288.3 ± 28.6a ND T=5.2**

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Table 4. 7 Calculated summary of LC-PUFA flux in juvenile barramundi. All data are (n=3) reported as a percentage based on the total intake of each fatty acid (nmol/g fish/d).

CTRL-D SFA-D MUFA-D TEST ^ 22:6n-3# % Converted ND ND ND N/A % Oxidised 58.1 ± 5.1a 38.6 ± 3.5b 36.7 ± 0.4b F=10.9*

% Excreted 1.5 ± 0.1 ND 2.7 ± 0.6 T=2.0, P=0.11

% Deposited 40.4 ± 5.0 a 61.4 ± 3.5 b 60.6 ± 0.3 b F=11.4** 22:5n-3 % Converted ND ND ND N/A % Oxidised 20.5 ± 8.0 ND ND N/A % Excreted ND ND ND N/A % Deposited 79.5 ± 8.0 100 ± 0.0 100 ± 0.0 N/A

20:5n-3 % Converted ND 3.5 ± 1.2 3.6 ± 0.3 T=0.1, P=0.96

% Oxidised 63.4 ± 3.7 a 47.3 ± 3.9 b 47.3 ± 1.1 b F=8.7*

% Excreted 1.0 ± 0.1 ND 1.4 ± 0.2 T=1.5, P=0.21

% Deposited 35.6 ± 3.6 a 49.2 ± 2.7 b 47.6 ± 0.7 b F=7.8*

n-3 LC-PUFA % Converted ND 1.2 ± 0.4 1.2 ± 0.1 T=0.1, P=0.96

% Oxidised 47.3 ± 5.6 a 28.6 ± 2.5 b 28.0 ± 0.5 b F=9.7*

% Excreted 0.8 ± 0.1 ND 1.4 ± 0.3 T=1.8, P=0.14

% Deposited 51.8 ± 5.5 a 70.2 ± 2.1 b 69.4 ± 0.2 b F=9.2* ND, not detected, N/A, not analysed. ^ P<0.001*** P<0.01** P<0.05*; One-way ANOVA, DF 2,6, post-hoc Tukey’s HSD; T-test, DF 4, was used to test two variables; Superscript letters indicate different levels of significance between treatment diets, percentage data were arcsine transformed prior to analysis. #Assumed that no further conversion occurs (Turchini et al 2007).

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4.4 Discussion

The present study demonstrated that the inclusion of a 2:1 or 1:2 ratio of either SFA

or MUFA, did not affect the growth performance of juvenile barramundi. The

simultaneous reduction of dietary LC-PUFA (~11% LC-PUFA in SFA- and MUFA-

D vs 21.5% LC-PUFA in CTRL-D), provided that they were still above reported

requirements of 1.2% LC-PUFA, also had no effect on performance (Williams et al.,

2006). Moreover, the feed intake and FCR values were unaffected. This is consistent

with a range of species showing that substitution of FO with lipid rich in either SFA

or MUFA does not affect fish growth performance (Turchini et al., 2009). The fish in

the present study more than tripled in size suggesting that trial duration or nutrient

turnover was not a confounding issue. The fish in the SFA-D and MUFA-D

treatments did show a numerical reduction in growth; however, this was not

confirmed statistically. It is uncertain whether longer trial duration would have

resulted in significant differences as recent studies with barramundi have

demonstrated that changes to the lipid profile of the diets can have rapid metabolic

effects (Salini et al., 2015c). Lipid and in particular the saturated fatty acids are

generally less digestible at lower environmental temperature and as a result less

energy is available for growth (Ng et al., 2004; Olsen and Ringø, 1998). The

barramundi is a tropical species adapted to high water temperature and potentially

better able to cope with dietary SFA and MUFA rich lipid.

The replacement of FO with MUFA rich lipid such as that from poultry oil

had no effect on growth or FCR in a range of species including rainbow trout

(Oncorhynchus mykiss) juveniles (Fonseca-Madrigal et al., 2005), post-smolt

Atlantic salmon (Salmo salar) (Bell et al., 2002) or large 1.5 kg Atlantic salmon

(Torstensen et al., 2000), juvenile red hybrid tilapia (Oreochromis sp.) (Bahurmiz

and Ng, 2007) humpback grouper (Cromileptes altivelis) (Shapawi et al., 2008) and

African catfish (Clarias gariepinus) (Ng et al., 2003). However, consistent among

these studies when FO was completely replaced by MUFA rich lipid was the

modified tissue FA profile resulting in reduced concentration of the beneficial n-3

LC-PUFA. The same effect was clearly noted in the present study. However,

proportional to the LC-PUFA intake, the results of most studies and those of the

present study conclude that MUFA rich lipid is an ideal energy source capable of

‘sparing’ the more valuable LC-PUFA from β-oxidation.

An important consideration when formulating with SFA rich palm oil (PO) is

the fraction used (Ng and Gibon, 2011). Past studies demonstrated that growth

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performance (Ng et al., 2003; Shapawi et al., 2008) and digestibility of a range of

species was not affected by different PO fractions (Bahurmiz and Ng, 2007) while

the digestibility of palm products was significantly reduced compared to FO. Recent

studies have also concluded that other sources of lipid rich in SFA such as beef

tallow did not affect the growth of Atlantic salmon (Emery et al., 2014) or rainbow

trout (Trushenski et al., 2011). Consistent with these reports, the present study

demonstrated that the blend of palm products used did not compromise growth

performance in barramundi while there were notable reductions to the lipid and

specific fatty acid digestibility.

In the present study, the digestibility of total lipid was significantly reduced

in the SFA fed fish and this did not lead to a reduction in energy availability or any

changes in whole-body lipid composition or retention. The reduction in lipid

digestibility was evidently a result of the greatly reduced digestibility of the

saturates, including both 16:0 and 18:0 FA. This is in agreement with other studies

showing that the digestibility of the saturated fatty acids was reduced when a range

of species were fed SFA rich oil (Caballero et al., 2002; Ng et al., 2004; Torstensen

et al., 2000; Turchini et al., 2013). Moreover, in the present study the digestibility of

SFA decreased with increasing chain length, consistent with other studies (Caballero

et al., 2002; Johnsen et al., 2000; Ng et al., 2004). The reduced rate of lipolysis and

absorption of longer chain SFA, such as 18:0 is caused by the lower ability of these

FA to form lipid emulsions prior to digestion (Olsen et al., 1998).

In contrast to the present study, negative effects of the high level inclusion of

SFA (e.g. as occurs with high level use of PO) have been reported and that these

effects are arguably more pronounced in carnivorous and/or marine fish with higher

n-3 LC-PUFA requirements. Fountoulaki et al. (2009) found that gilthead sea bream

growth was negatively impacted by reduced digestibility of SFA rich lipid over an

extended growth trial of six months. Japanese seabass (Lateolabrax japonicas)

growth performance was significantly reduced with a high inclusion of SFA rich

lipid after only 50 days of growth and similarly reduced digestibility was inferred to

be the cause (Gao et al., 2012). In agreement, Turchini et al. (2013) found that over a

long duration (27 weeks) rainbow trout fed SFA rich lipid (at 75% replacement level)

showed depressed performance compared to that of a control diet.

An in vivo whole-body fatty acid balance method (WBFABM) was used in

the present study in order to understand the apparent fate of specific fatty acids

(Turchini et al., 2007). Theoretically, β-oxidation of specific fatty acids should be

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92 | P a g e

recorded if they are provided in excess (Eroldogan et al., 2013; Stubhaug et al., 2007;

Turchini et al., 2013). However, in the present study there was no recorded β-

oxidation of any SFA despite the relatively high proportion of SFA in all three diets.

This effect is likely to be caused by the low lipid levels of all three diets, a strategy

that was intended to highlight the potential effects of the lipid classes. Based on the

β-oxidation results, it appears that MUFA are marginally better at sparing LC-PUFA

from β-oxidation (Table 4.6) which is in agreement with past studies (Codabaccus et

al., 2012; Turchini et al., 2011b). However, in the present study the final composition

of the fish suggests that the SFA-D fed fish were significantly more efficient at

depositing or ‘sparing’ LC-PUFA in the whole body (Table 4.5). To resolve this

discrepancy, it is necessary to look at the net intake and total intake budgets to clarify

the situation (Table 4.7). When expressed proportional to FA intake, the SFA-D and

MUFA-D fed fish consequently deposited almost exactly the same n-3 LC-PUFA

and the differences between the two diets were insignificant.

Previous studies have demonstrated that limited de novo FA production

(neogenesis) occurs when diets with adequate SFA were fed to Atlantic salmon

(Emery et al., 2014) or rainbow trout (Turchini et al., 2013). However, neogenesis

was evident in MUFA rich (canola oil) fed trout (Turchini et al., 2013). This is

broadly similar to the results obtained in the present study in that neogenesis in

barramundi was significantly higher in the MUFA fed fish. This may be partly

explained by the up-regulation of genes related to lipogenic activity in response to

vegetable oil observed in other species (Bell et al., 2001; Bell et al., 2002; Tocher et

al., 2002). In contrast, dietary PUFA clearly led to a suppression of the lipogenic

enzyme, fatty acid synthase (FAS) in the rat (Blake and Clarke, 1990). Moreover, in

rainbow trout hepatocytes, FAS expression was strongly inhibited by PUFA (18:3n-3

and 20:5n-3). These results and those of the present study confirm that the

energetically expensive process of initial synthesis of palmitic acid from acetyl- and

malonyl-CoA is avoided by the presence of dietary SFA thus allowing energy to be

utilised more efficiently for growth and other cellular processes.

Elongation and desaturation activity also occurred in the CTRL-D fed fish

suggesting that the total lipid content of the diet was limiting as intended based on

the optimal specification of at least 18% for growing barramundi (Glencross et al.,

2013). However, there was clearly adequate n-3 LC-PUFA in the diets based on the

known requirement data for barramundi of around 1.2% (Glencross and Rutherford,

2011; Williams et al., 2006). Consistent with Glencross and Rutherford (2011), there

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93 | P a g e

was no elongation of 20:5n-3 to 22:5n-3 in the control fed fish. However, in the

SFA-D and MUFA-D fed fish, there was a slight increase in the elongation of

available 20:5n-3 to 22:5n-3 possibly in an attempt to achieve 22:6n-3 synthesis.

However, barramundi, like most marine fish are not equipped with the complete set

of enzymes required to endogenously synthesise sufficient LC-PUFA from precursor

FA (Mohd-Yusof et al., 2010). Moreover, a recent study also demonstrated a similar

increase in 22:5n-3 from 20:5n-3, lending further support to the elongation results

obtained in the present study (Salini et al., 2015a).

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5.0 The effect of marine and non-marine phospholipid rich oils when

fed to juvenile barramundi (Lates calcarifer)

Adapted from

Salini, M.J., Wade, N.M., Bourne, N., Turchini, G.M., Glencross, B.D., 2016. The

effect of marine and non-marine phospholipid rich oils when fed to juvenile

barramundi (Lates calcarifer). Aquaculture. 455, 125-135

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5.1 Aims

Most phospholipid requirement studies to date have used soybean lecithin containing

high levels of n-6 PUFA, while others have used egg lecithin or various other marine

sources such as fish roe lecithin (Cahu et al., 2009). Recent studies have clearly

demonstrated the potential of marine derived phospholipid sources to improve larval

and juvenile fish performance (Betancor et al., 2012; Taylor et al., 2015). To date,

information is scarce on the effect of phospholipid in juvenile barramundi diets.

Therefore, an experiment was designed to compare the metabolic effect of marine

and non-marine neutral lipid (NL) and polar (PL) sources using a two-by-two

factorial approach in juvenile barramundi. The biochemical and molecular

mechanisms underpinning the role of phospholipids was also investigated.

5.2 Materials and methods

The methodology used in the present experiment are detailed in the section 2.0

General methodology. Ethical clearance was approved for the experimental

procedures by the CSIRO Animal Ethics Committee (Application A11/2013). The

chemical composition of the main dietary ingredients is presented in Table 5.1. The

formulation and chemical composition of the four diets are presented in Table 5.2.

The neutral and polar lipid composition of the experimental diets are presented in

Table 5.3. Genes involved in fatty acid metabolism were analysed by real-time qPCR

as described and are presented in Table 5.4.

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98 |

Pa

ge

Tab

le 5

. 1 C

hem

ical

com

posi

tion

of in

gred

ient

s use

d in

exp

erim

enta

l die

ts, a

ll va

lues

are

g/k

g D

M u

nles

s oth

erw

ise

stat

ed

Fish

m

eal#

Poul

try

mea

l So

y is

olat

e

Whe

at

glut

en

Whe

at

flour

C

asei

n

Whe

at

star

ch

Fish

oil

K

rill o

il So

ybea

n oi

l So

ybea

n le

cith

in

Com

posi

tion

Dry

mat

ter (

g/kg

) 98

.4

95.8

95

.8

92.7

83

.9

92.4

83

.6

99.2

99

.9

100.

0 98

.0

Pr

otei

n 78

.9

64.1

89

.5

82.3

11

.2

87.0

0.

5 0.

4 4.

5 1.

0 7.

5

Ash

16

.3

13.8

4.

6 0.

1 0.

6 1.

1 0.

3 0.

1 2.

9 N

D

9.8

Li

pid

4.6

15.1

5.

7 12

.1

2.2

0.5

ND

95

.6

92.6

94

.6

75.7

Car

bohy

drat

e 0.

1 7.

0 0.

2 5.

5 86

.0

11.3

99

.2

3.9

ND

4.

5 7.

1

Gro

ss e

nerg

y (m

J/kg

) 18

.9

20.4

21

.8

21.2

15

.3

21.9

14

.5

39.3

36

.3

39.5

29

.7

Fatty

aci

ds (m

g/g

lipid

)

16

:0

149.

0 16

1.7

NA

N

A

NA

N

A

NA

12

8.4

107.

3 93

.7

111.

5

18:0

50

.9

55.4

N

A

NA

N

A

NA

N

A

29.0

6.

3 35

.4

23.7

18:1

89

.8

277.

0 N

A

NA

N

A

NA

N

A

104.

0 90

.0

220.

7 53

.3

18

:2n-

6 10

.4

71.4

N

A

NA

N

A

NA

N

A

11.7

12

.2

430.

6 32

6.1

18

:3n-

3 4.

7 7.

1 N

A

NA

N

A

NA

N

A

5.8

7.1

49.7

41

.8

20

:4n-

6 16

.4

4.5

NA

N

A

NA

N

A

NA

9.

1 3.

2 N

D

ND

20:5

n-3

57.6

3.

7 N

A

NA

N

A

NA

N

A

70.3

14

4.5

ND

N

D

22

:5n-

3 13

.0

ND

N

A

NA

N

A

NA

N

A

12.4

0.

0 N

D

ND

22:6

n-3

152.

2 N

D

NA

N

A

NA

N

A

NA

10

5.3

94.8

N

D

ND

SFA

23

1.5

230.

1 N

A

NA

N

A

NA

N

A

205.

5 17

5.3

137.

1 13

5.8

M

UFA

12

9.1

322.

0 N

A

NA

N

A

NA

N

A

163.

2 13

5.5

221.

7 53

.3

C

18PU

FA

20.0

78

.5

NA

N

A

NA

N

A

NA

27

.5

39.6

48

3.6

367.

9

LC-P

UFA

24

4.4

8.2

NA

N

A

NA

N

A

NA

20

0.5

242.

6 N

D

ND

Tota

l n-3

22

2.7

3.7

NA

N

A

NA

N

A

NA

19

8.0

259.

7 N

D

ND

Tota

l n-6

36

.7

83.0

N

A

NA

N

A

NA

N

A

29.9

22

.5

483.

6 36

7.9

# Fi

sh m

eal w

as d

efat

ted

usin

g he

xane

. Ple

ase

see

met

hods

for d

etai

ls. N

A, N

ot a

naly

sed;

ND

, Not

det

ecte

d.^

18:1

, sum

of 1

8:1n

-7, 1

8:1n

-9 c

is, 1

8:1n

-9

trans

; sat

urat

ed fa

tty a

cids

(SFA

), su

m o

f 12:

0, 1

4:0,

16:

0, 1

8:0,

20:

, 22:

0, 2

4:0;

mon

ouns

atur

ated

fatty

aci

ds (M

UFA

), su

m o

f 14:

1n-5

, 16:

1n-7

,

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99 |

Pa

ge

18:1

n-7,

18:

1n-9

(cis

and

tran

s), 2

0:1n

-7, 2

0:1n

-9, 2

2:1n

-9, 2

4:1n

-9; p

olyu

nsat

urat

ed fa

tty a

cids

, with

18

carb

on a

tom

s (C

18 P

UFA

), su

m 1

8:2n

-6 (c

is

and

trans

), 18

:3n-

6, 1

8:3n

-3, 1

8:4n

-3; l

ong

chai

n po

lyun

satu

rate

d fa

tty a

cids

, with

20

or m

ore

carb

on a

tom

s (LC

-PU

FA),

sum

20:

2n-6

, 20:

3n-6

, 20:

4n-

6, 2

2:4n

-6, 2

0:3n

-3, 2

0:5n

-3, 2

2:5n

-3, 2

2:6n

-3; n

-3, s

um o

f om

ega

3 C

18 P

UFA

and

LC

-PU

FA; n

-6, s

um o

f om

ega

6 C

18 P

UFA

and

LC

-PU

FA

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Table 5. 2 Formulation and composition (as analysed) of experimental diets, all values are g/kg DM unless otherwise stated.

n-3 NL (Fish)

n-3 PL (Krill)

n-6 NL (Soybean)

n-6 PL (Lecithin)

Formulation Fish meal a 150 150 150 150 Poultry meal a 150 150 150 150 Soy protein isolate b 150 150 150 150 Wheat gluten b 150 150 150 150 Wheat flour b 109 109 109 109 Casein c 100 100 100 100 Pregelled wheat starch b 80 80 80 80 DL-Methionine 10 10 10 10 Di-calcium phosphate 10 10 10 10 Pre-mix vitamins d 8 8 8 8 Yttrium oxide e 1 1 1 1 Fish oil a 82 10 10 10 Krill Oil f 0 72 0 0 Soy oil g 0 0 72 0 Soy lecithin g 0 0 0 72 Composition Dry matter (g/kg) 940 933 959 952 Protein(g/kg DM) 598 613 597 593 Digestible protein (g/kg DM) 547 561 559 555 Ash (g/kg DM) 64 65 67 70 Lipid (g/kg DM) 122 124 122 118 Carbohydrate (g/kg DM) 212 198 214 219 Gross energy (mJ/kg) 21.5 21.1 21.8 21.0 Digestible energy (mJ/kg) 18.9 18.4 19.8 18.6

a Ridley Aquafeed, Narangba, QLD, Australia. Fish meal defatted (see methods 2.2.1). b Manildra Group, Rocklea, QLD, Australia. c Bulk Powders, Moorabbin, Victoria, Australia. d Vitamin and mineral premix (IU kg-1 or g/kg of premix): vitamin A, 2.5MIU; vitamin D3, 0.25 MIU; vitamin E, 16.7 g; vitamin K3, 1.7 g; vitamin B1, 2.5 g; vitamin B2, 4.2 g; vitamin B3, 25 g; vitamin B5, 8.3; vitamin B6, 2.0 g; vitamin B9, 0.8; vitamin B12, 0.005 g; biotin, 0.17 g; vitamin C, 75 g; choline, 166.7 g; inositol, 58.3 g; ethoxyquin, 20.8 g; copper, 2.5 g; ferrous iron, 10.0 g; magnesium, 16.6 g; manganese, 15.0 g; zinc, 25.0 g e Yttrium oxide; Stanford Materials, Aliso Viejo, California, United States f Sydney Essential Oil Co. (Sydney, NSW, Australia)

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Table 5. 3 Neutral and polar lipid composition of experimental diets, all values are mg/g lipid unless otherwise stated.

Diets

n-3 NL (Fish)

n-3 PL (Krill)

n-6 NL (Soybean)

n-6 PL (Lecithin)

Lipid class (% total lipid) Neutral 91.5 67.5 89.7 51.1 Polar 8.5 32.5 10.3 48.9 Neutral lipid fatty acids ^ 16:0 190.9 186.7 137.7 207.6 18:0 45.9 34.0 44.0 52.3 18:1n-9 194.6 223.6 252.9 225.4 18:2n-6 48.0 69.7 351.5 183.5 18:3n-3 10.2 10.8 40.3 22.2 20:4n-6 10.9 5.6 0.0 6.2 20:5n-3 79.4 92.6 13.1 35.0 22:5n-3 14.4 5.0 3.6 7.3 22:6n-3 117.5 71.8 19.7 54.7 SFA 298.6 304.0 195.1 291.5 MUFA 284.0 293.1 274.7 278.4 C18PUFA 58.3 97.7 395.7 210.9 LC-PUFA 222.2 175.1 36.4 103.3 Total n-3 211.2 186.7 40.2 102.3 Total n-6 69.2 86.1 391.9 211.9 Total fatty acids 863.1 869.9 901.8 884.0 Polar lipid fatty acids ^ 16:0 139.5 147.3 121.4 118.7 18:0 44.1 18.4 35.9 27.7 18:1n-9 101.8 87.0 109.0 68.1 18:2n-6 121.4 55.3 150.9 317.6 18:3n-3 7.7 7.0 11.6 37.3 20:4n-6 10.1 ND 6.9 ND 20:5n-3 27.5 87.8 29.3 5.9 22:5n-3 7.4 4.4 4.9 ND 22:6n-3 60.0 68.2 41.6 12.1 SFA 204.8 188.9 166.1 146.4 MUFA 144.9 110.4 128.5 71.6 C18PUFA 129.1 71.6 162.5 354.9 LC-PUFA 105.0 160.4 82.6 18.0 Total n-3 94.9 169.7 75.7 18.0 Total n-6 139.2 62.3 169.4 354.9 Total fatty acids 583.8 531.2 539.7 591.0

n-3 NL, Fish oil; n-3 PL, Krill oil; n-6 NL, Soybean oil; n-6 PL, Soybean lecithin. ND, not detected. ^ Refer to Table 5.1 for details.

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102

| Pa

ge

Tab

le 5

. 4 R

eal t

ime

quan

titat

ive

PCR

pri

mer

pai

rs fo

r fa

tty

acid

met

abol

ism

and

con

trol

gen

es

NA

, Not

ava

ilabl

e.

Targ

et n

ame

Abb

revi

atio

n EC

num

ber

Prim

er n

ame

Sequ

ence

Le

ngth

Fa

tty a

cid

synt

hase

Lc

FAS

EC

2.3

.1.8

5 FA

S qP

CR

.For

1 TG

AA

TCTC

AC

CA

CG

CTT

CA

G

20

FAS

qPC

R.R

ev1

AG

GC

AG

CA

ATA

GA

AC

CC

TCA

20

Ster

oyl C

oA d

esat

uras

e Lc

SC

D

EC 1

.14.

19.1

SC

D q

PCR

.For

1 C

CTG

GTA

CTT

CTG

GG

GTG

AA

20

SC

D q

PCR

.Rev

1 A

AG

GG

GA

ATG

TGTG

GTG

GTA

20

Car

nitin

e pa

lmito

yltra

nsfe

rase

Lc

CPT

EC 2

.3.2

.21

CPT

1a q

PCR

.For

1 TG

ATG

GTT

ATG

GG

GTG

TCC

T 20

C

PT1a

qPC

R.R

ev1

CG

GC

TCTC

TTC

AA

CTT

TGC

T 20

ATP

citr

ate

lyas

e Lc

ACY

L EC

2.3

.3.8

Lc

al a

cyl F

1 C

AA

CA

CC

ATT

GTC

TGTG

CTC

20

Lc

al a

cyl R

1 G

AA

ATG

CTG

CTT

AA

CA

AA

GTC

C

21

Fa

tty a

cid

elon

gatio

n 5

Lc E

LOVL

5 EC

2.3

.1.n

8 Lc

al F

ads2

F1

ATC

CA

GTT

CTT

CTT

AA

CC

GT

20

Lcal

Fad

s2 R

1 G

GTT

TCTC

AA

ATG

TCA

ATC

CA

C

22

Fa

tty a

cid

desa

tura

se 6

Lc

FAD

S2

EC 1

.14.

19

Lcal

ELO

VL5

F1

TCA

TAC

TAC

CTT

CG

CTA

CTT

CTC

23

Lc

al E

LOV

L5 R

1 A

CA

AA

CC

AG

TGA

CTC

TCC

AG

20

Luci

fera

se

Luc

NA

Lu

c qP

CR

For

G

GTG

TTG

GG

CG

CG

TTA

TTTA

20

Lu

c qP

CR

Rev

C

GG

TAG

GC

TGC

GA

AA

TGC

18

Elon

gatio

n fa

ctor

EF1α

N

A

Lcal

EF1

a F

AA

ATT

GG

CG

GTA

TTG

GA

AC

19

Lc

al E

F1a

R

GG

GA

GC

AA

AG

GTG

AC

GA

C

18

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5.3 Results

5.3.1 Growth and feed utilisation

In the present study the two levels of omega status were defined as n-3 and n-6 and

the two levels of lipid class were defined as neutral lipid and phospholipid. There

was no difference in the initial weight of the fish among the treatments; however,

there were significant differences in the growth and feed utilisation parameters (as

final weight, feed intake and FCR) upon termination of the 56 d growth assay (Table

5.5). There were significant interaction terms indicating that the effectiveness of

phospholipid-rich ingredients was found to be dependent on the omega status for the

final weight, feed intake and FCR. The lowest growth performance and feed intake

was seen in the fish fed n-6 NL (soybean oil) and the FCR was reduced in the n-6 PL

fed fish (soybean lecithin). There were no differences in terms of survival with only

three fish removed from the system. There were no significant differences in either

protein or lipid retention (Table 5.5).

There were no differences in apparent digestibility of dry matter, protein or

gross energy (Table 5.6). There was a significant interaction effect indicating that the

digestibility of total lipid in the phospholipid-rich treatments was dependent on the

omega status with the lowest lipid digestibility in the n-6 PL (soybean lecithin)

treatment. There was a significant interaction in the digestibility of 16:0 which

showed that the highest digestibility in the n-6 NL treatment was dependent on the

lipid class. There was also a significant interaction noted for the digestibility of

18:2n-6, total C18PUFA and total n-6 showing that the digestibility of fatty acids

from phospholipid-rich ingredients was dependent on the omega status. In each case

the digestibility was lowest in the n-6 PL treatment (soybean lecithin). Similarly, the

digestibility of 18:3n-3 was significantly lower in the n-6 PL fed fish.

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ge

Tab

le 5

. 5 G

row

th a

nd fe

ed u

tilis

atio

n pa

ram

eter

s of j

uven

ile b

arra

mun

di fe

d ex

peri

men

tal d

iets

for

eigh

t wee

ks. D

ata

(n=3

) are

pre

sent

ed a

s m

ean

± SE

M.

n-3

NL;

Fis

h oi

l, n-

3 PL

; Kril

l oil,

n-6

NL;

Soy

bean

oil,

n-6

PL;

Soy

bean

leci

thin

. R

et. n

utrie

nt =

(nut

rient

fina

l - n

utrie

nt in

itial

/ nu

trien

t con

sum

ed)*

100.

* ’ <

0.0

5, ‘

** ’

< 0.

01, ‘

***

’ <

0.00

1; su

pers

crip

t let

ters

indi

cate

sign

ifica

nt d

iffer

ence

s am

ong

mea

ns.

† Tw

o-w

ay fa

ctor

ial A

NO

VA

, df 1

,1,1

,8, p

ost-h

oc T

ukey

's H

SD; p

ost-h

oc T

ukey

’s H

SD. N

S, n

ot si

gnifi

cant

P >

0.0

5.

D

iets

Test

n-

3 N

L

(Fis

h)

n-3

PL

(Kril

l) n-

6 N

L

(Soy

) n-

6 PL

(L

ecith

in)

Om

ega

Cla

ss

Inte

ract

ion

In

itial

wei

ght (

g)

46.9

± 0

.1

46.7

± 0

.2

47.1

± 0

.1

46.9

± 0

.2

NS

NS

NS

Fi

nal w

eigh

t (g)

23

8.3

± 1.

2 a

237.

1 ±

1.1

a 21

7.5

± 1.

6 b

233.

4 ±

3.8 a

**

* *

**

Fe

ed in

take

20

9.6

± 2.

7 b

211.

1 ±

2.6 b

18

9.4

± 0.

7 c

222.

2 ±

0.9 a

*

***

***

FC

R

1.10

± 0

.1 a

1.11

± 0

.1 a

1.11

± 0

.1 a

1.19

± 0

.1 b

*

* *

Su

rviv

al (%

) 98

.0

98.0

10

0.0

98.0

N

S N

S N

S

Ret

. Pro

tein

(%)

34.1

± 1

.1

34.1

± 1

.5

31.7

± 0

.9

28.4

± 0

.5

NS

NS

NS

R

et. l

ipid

(%)

48.6

± 4

.5

49.8

± 1

.4

49.2

± 1

.4

43.1

± 3

.6

NS

NS

NS

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105

| Pa

ge

Tab

le 5

. 6 A

ppar

ent d

iges

tibili

ty (%

) par

amet

ers o

f the

die

ts fe

d to

juve

nile

bar

ram

undi

. Dat

a (n

=3) a

re p

rese

nted

as m

ean

± SE

M.

‘ * ’

< 0.

05, ‘

**

’ < 0

.01,

‘ **

* ’ <

0.0

01; s

uper

scrip

t let

ters

indi

cate

sign

ifica

nt d

iffer

ence

s am

ong

mea

ns.

† Tw

o-w

ay fa

ctor

ial A

NO

VA

, df 1

,1,1

,8, p

ost-h

oc T

ukey

's H

SD; 1

8:3n

-3 a

naly

sed

by o

ne-w

ay A

NO

VA

df 3

,7, P

<0.0

1, p

ost-h

oc T

ukey

's H

SD.

NA

, not

ana

lyse

d; N

S, n

ot si

gnifi

cant

P >

0.0

5. ^

Ref

er to

Tab

le 5

.1 fo

r det

ails

.

Die

ts

Te

st †

n-

3 N

L

(Fis

h)

n-3

PL

(Kril

l) n-

6 N

L

(Soy

bean

) n-

6 PL

(L

ecith

in)

Om

ega

Cla

ss

Inte

ract

ion

Die

t

Dry

mat

ter

64.3

± 1

.6

67.4

± 1

.6

63.7

± 4

.1

66.6

± 2

.2

NS

NS

NS

Pr

otei

n 91

.1 ±

0.7

91

.2 ±

1.8

92

.6 ±

0.3

92

.8 ±

0.4

N

S N

S N

S

Lipi

d 90

.7 ±

0.9

ab

91.2

± 1

.2 ab

94

.2 ±

0.4

a 89

.3 ±

0.6

b N

S *

*

Ener

gy

87.3

± 1

.5

86.6

± 1

.3

89.3

± 0

.7

87.5

± 0

.8

NS

NS

NS

Fatty

aci

ds ^

16:0

81

.5 ±

1.9

a 84

.2 ±

1.0

ab

87.7

± 0

.8 b

84.4

± 0

.8 ab

*

NS

*

18:0

76

.7 ±

3.0

77

.5 ±

2.9

84

.6 ±

1.2

79

.5 ±

1.1

N

S N

S N

S

18:1

n-9

92.1

± 0

.8

90.4

± 2

.7

95.0

± 0

.3

90.5

± 0

.4

NS

NS

NS

18

:2n-

6 95

.8 ±

0.2

ab

94.9

± 1

.0 a

b 97

.3 ±

0.1

a

90.3

± 1

.6 b

N

S **

*

18

:3n-

3 98

.6 ±

1.2

a

100.

0 ±

0.0

98.3

± 0

.1 a

92.5

± 1

.4 b

N

A

NA

N

A

20

:4n-

6 10

0.0

± 0.

0 10

0.0

± 0.

0 10

0.0

± 0.

0 10

0.0

± 0.

0 N

A

NA

N

A

20

:5n-

3 99

.0 ±

0.4

97

.7 ±

0.2

10

0.0

± 0.

0 10

0.0

± 0.

0 N

A

NA

N

A

22

:5n-

3 10

0.0

± 0.

0 10

0.0

± 0.

0 10

0.0

± 0.

0 10

0.0

± 0.

0 N

A

NA

N

A

22

:6n-

3 98

.5 ±

0.2

96

.0 ±

0.2

92

.9 ±

0.6

98

.0 ±

2.0

N

S N

S N

S

SFA

82

.3 ±

1.8

85

.3 ±

1.1

87

.3 ±

1.0

84

.1 ±

0.6

N

S N

S N

S

MU

FA

92.6

± 0

.8

91.3

± 2

.3

94.7

± 0

.4

91.1

± 0

.4

NS

NS

NS

C

18PU

FA

96.5

± 0

.2 a

96.1

± 0

.7 a

97.5

± 0

.1 a

90.5

± 1

.5 b

*

**

*

LC-P

UFA

98

.9 ±

0.2

97

.1 ±

0.2

96

.2 ±

0.3

98

.9 ±

1.1

N

S N

S N

S

Tota

l n-3

98

.9 ±

0.2

97

.5 ±

0.1

97

.6 ±

0.1

95

.2 ±

1.5

N

S N

S N

S

Tota

l n-6

96

.3 ±

0.1

a 95

.2 ±

0.9

ab

97.2

± 0

.1 a

91.1

± 1

.4 b

NS

**

*

Page 107: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

106 | P a g e

5.3.2 Biochemical analysis

As intended, the neutral and polar composition of the diets was reflective of the lipid

composition of the ingredients used (Table 5.3).There were no significant differences

in the neutral and polar lipid composition of the whole fish with all treatments in the

range of 89.4 to 94.0% neutral lipid (Table 5.7). Fatty acid analysis of the neutral and

polar fractions revealed several significant differences among the treatments.

Significant interaction terms were noted for many of the neutral lipid fatty acids.

Most notably, the effect of phospholipid-rich ingredients on LC-PUFA (specifically

22:6n-3, 22:5n-3 and 20:5n-3) composition in the whole fish were found to be

dependent on the omega status with the highest levels present in the n-3 treatments.

Of the polar lipid fatty acids, the18:2n-6 composition was significantly higher in the

n-6 treatments whereas the 16:0, 20:5n-3 and 22:6n-3 composition was highest in the

n-3 treatments.

There was several significant interaction terms noted on the apparent in-vivo

β-oxidation activity (Table 5.8). The phospholipid-rich ingredients were found to be

effective in modifying the β-oxidation of MUFA in the n-6 PL fed fish; however, this

was not the case for the n-3 PL fish. There was a significant interaction term noted in

the β-oxidation C18PUFA and Total n-6 with the highest activity in the phospholipid-

rich lipid being dependent on the omega status. There was also a significant

interaction for the β-oxidation of LC-PUFA and Total n-3 which was dependent on

the omega status with the highest activity in the n-3 NL treatments.

There was a significant interaction indicating that elongation activity of SFA

was highest in the n-6 NL treatment and lowest activity was in the n-3 NL treatment

(Table 5.8). There was no detectable elongation activity of the LC-PUFA or Total n-

3 in the n-3 NL fed fish; however, when analysed by one-way ANOVA there was

significantly greater activity in the n-3 PL fed fish compared to both of the n-6

treatments. There was also a significant interaction in the delta-9 (Steroyl CoA

desaturase) desaturation activity with greatest activity recorded in the n-6 NL and the

lowest activity in the n-3 NL treatment.

Page 108: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

107

| Pa

ge

Tab

le 5

. 7 N

eutr

al a

nd p

olar

lipi

d co

mpo

sitio

n in

the

who

le b

ody

of ju

veni

le b

arra

mun

di fe

d ex

peri

men

tal d

iets

. All

valu

es a

re m

g/g

lipid

un

less

oth

erw

ise

stat

ed. D

ata

(n=3

) are

pre

sent

ed a

s mea

n ±

SEM

Die

ts

Te

st †

n-3

NL

(F

ish)

n-

3 PL

(K

rill)

n-6

NL

(S

oybe

an)

n-6

PL

(Lec

ithin

) O

meg

a C

lass

In

tera

ctio

n Li

pid

clas

s (%

tota

l lip

id)

Neu

tral

91.7

± 1

.1

91.4

± 1

.4

94.0

± 1

.5

89.4

± 0

.6

NS

NS

NS

Po

lar

8.3

± 1.

1 8.

6 ±

1.4

6.0

± 1.

5 10

.6 ±

0.6

N

S N

S N

S N

eutr

al li

pid

fatty

aci

ds ^

16

:0

227.

1 ±

2.1 a

22

9.6

± 1.

1 a

198.

0 ±

4.5 b

23

8.4

± 3.

9 a

* **

* **

*

18:0

61

.2 ±

0.6

ab

56.5

± 0

.7 a

64.6

± 1

.9 b

71

.3 ±

0.9

c

***

NS

**

18

:1n-

9 25

4.8

± 3.

3 a

257.

1 ±0

.6 a

286.

7 ±8

.0 b

24

4.1

± 1.

6 a

NS

**

***

18

:2n-

6 76

.4 ±

1.6

a

82.5

± 0

.8 a

264.

5 ±

8.9 b

20

2.0

± 0.

4 c

***

***

***

18

:3n-

3 9.

0 ±

0.3 a

10

.0 ±

0.1

a

27.0

± 1

.2 b

21.2

± 0

.2 c

***

**

***

20

:4n-

6 5.

6 ±

0.1

1.2

± 1.

2 N

D

ND

N

A

NA

N

A

20

:5n-

3 32

.1 ±

0.9

a 53

.2 ±

1.1

b 8.

7 ±

0.7

c 10

.5 ±

0.2

c **

* **

* **

*

22:5

n-3

13.4

± 0

.4 a

11.6

± 0

.2 b

5.9

± 0.

3 c

6.5

± 0.

1 c

***

NS

**

22

:6n-

3 54

.7 ±

2.4

a 47

.4 ±

1.4

b 18

.0 ±

1.1

c 21

.1 ±

0.7

c **

* N

S **

SFA

33

5.3

± 1.

8 a

331.

4 ±

0.8 a

28

6.7

± 7.

0 b

338.

3 ±

4.7 a

**

**

* **

*

MU

FA

322.

9 ±

3.9 a

31

5.3

± 0.

6 a

319.

1 ±

8.3 a

28

4.7

± 2.

0 b

**

**

*

C18

PUFA

97

.7 ±

1.8

a

109.

7 ±

0.8 a

29

7.4

± 10

.0 c

231.

3 ±

0.3 b

**

* **

* **

*

LC-P

UFA

10

5.8

± 3.

8 a

113.

3 ±

3.0 a

37

.5 ±

2.3

b

43.1

± 1

.0 b

**

* *

NS

To

tal n

-3

106.

4 ±

3.9 b

12

3.1

± 2.

7 a

32.5

± 2

.1 c

38.1

± 0

.9 c

***

**

NS

To

tal n

-6

97.0

± 1

.7 a

99.9

± 1

.9 a

302.

3 ±

10.2

c

236.

2 ±

0.3 b

**

* **

* **

*

Tota

l fat

ty a

cids

86

1.6

± 5.

7 a

869.

7 ±

3.8 a

94

0.7

± 25

.6 b

897.

3 ±

5.4 a

b **

N

S N

S Po

lar l

ipid

fatty

aci

ds ^

16

:0

171.

4 ±

5.7 a

16

3.6

± 0.

2 a

135.

8 ±

2.4 b

14

3.8

± 2.

8 b

**

NS

NS

18

:0

65.9

± 4

.5

62.0

± 1

.2

69.9

± 0

.6

61.7

± 3

.5

NS

NS

NS

Page 109: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

108

| Pa

ge

18

:1n-

9 15

5.0

±1.0

14

5.2

± 3.

4 13

9.1

± 4.

5 14

3.3

± 8.

9 N

S N

S N

S

18:2

n-6

42.9

± 0

.9 a

39.5

± 1

.7 a

129.

7 ±

3.2 b

12

0.3

± 9.

9 b

***

NS

NS

18

:3n-

3 N

D

ND

N

D

9.8

± 1.

6 N

A

NA

N

A

20

:4n-

6 12

.2 ±

2.6

6.

9 ±

1.3

8.9

± 0.

1 5.

7 ±

0.5

NS

NS

NS

20

:5n-

3 26

.5 ±

3.2

ab

35.2

± 5

.4 a

11.1

± 0

.1 b

11

.4 ±

0.7

b

**

NS

NS

22

:5n-

3 11

.8 ±

1.6

10

.8 ±

1.8

10

.0 ±

0.3

7.

0 ±

0.1

NS

NS

NS

22

:6n-

3 66

.8 ±

13.

0 a

57.6

± 1

1.9 a

42

.1 ±

0.9

ab

24.5

± 1

.7 b

*

NS

NS

SF

A

254.

9 ±

6.4 a

24

4.9

± 3.

2 ab

205.

7 ±

3.0 c

22

1.2

± 5.

3 bc

**

NS

NS

M

UFA

18

9.9

± 6.

0 17

5.7

± 6.

3 15

6.5

± 4.

8 17

2.7

± 8.

3 N

S N

S N

S

C18

PUFA

48

.4 ±

3.6

a

43.2

± 4

.7 a

133.

3 ±

6.1 b

13

5.0

± 12

.2 b

**

* N

S N

S

LC-P

UFA

11

7.3

± 20

.4 a

110.

5 ±

20.4

a

83.9

± 1

.4 a

b 56

.0 ±

1.8

b

* N

S N

S

Tota

l n-3

10

6.7

± 16

.4 a

100.

4 ±

17.7

a

63.2

± 1

.3 a

b 42

.9 ±

1.1

b

* N

S N

S

Tota

l n-6

59

.0 ±

0.3

a

48.3

± 2

.0 a

154.

1 ±

6.0 b

14

8.1

± 11

.5 b

**

* N

S N

S

Tota

l fat

ty a

cids

61

0.6

± 1

7.2

569.

4 ±

6.1

579.

4 ±

12.5

58

4.8

± 13

.4

NS

NS

NS

‘ * ’

< 0.

05, ‘

**

’ < 0

.01,

‘ **

* ’ <

0.0

01; s

uper

scrip

t let

ters

indi

cate

sign

ifica

nt d

iffer

ence

s am

ong

mea

ns.

† Tw

o-w

ay fa

ctor

ial A

NO

VA

, df 1

,1,1

,8, p

ost-h

oc T

ukey

's H

SD

NA

, not

ana

lyse

d; N

D, n

ot d

etec

ted;

NS,

not

sign

ifica

nt P

> 0

.05.

^

Ref

er to

Tab

le 5

.1 fo

r det

ails

.

Page 110: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

109

| Pa

ge

Tab

le 5

. 8 W

hole

bod

y fa

tty

acid

bal

ance

cal

cula

tions

of β

-oxi

datio

n, e

long

atio

n an

d de

satu

ratio

n of

juve

nile

bar

ram

undi

fed

expe

rim

enta

l di

ets f

or e

ight

wee

ks. A

ll va

lues

are

pre

sent

ed a

s nm

ol/g

fish

/d. D

ata

(n=3

) are

pre

sent

ed a

s mea

n ±

SEM

.

SCD,

Ste

royl

CoA

des

atur

ase;

FA

DS2

, Fat

ty a

cid

desa

tura

se 6

. FA

DS1

(Δ-5

Des

.) an

d ch

ain

shor

teni

ng w

ere

not d

etec

ted

or re

porte

d.

‘ * ’

< 0.

05, ‘

**

’ < 0

.01,

‘ **

* ’ <

0.0

01; s

uper

scrip

t let

ters

indi

cate

sign

ifica

nt d

iffer

ence

s am

ong

mea

ns.

† Tw

o-w

ay fa

ctor

ial A

NO

VA

, df 1

,1,1

,8, p

ost-h

oc T

ukey

's H

SD; E

long

atio

n LC

-PU

FA a

nd to

tal n

-3 w

ere

anal

ysed

by

one-

way

AN

OV

A d

f 3,7

, pos

t-ho

c Tu

key'

s HSD

. NA

, not

ana

lyse

d; N

D, n

ot d

etec

ted;

NS,

not

sign

ifica

nt P

> 0

.05.

^

Ref

er to

Tab

le 5

.1 fo

r det

ails

.

Die

ts

Te

st †

n-

3 N

L

(Fis

h)

n-3

PL

(Kril

l) n-

6 N

L

(Soy

bean

) n-

6 PL

(L

ecith

in)

Om

ega

Cla

ss

Inte

ract

ion

β-O

xida

tion

^

SFA

33

9.7

± 18

.2

ND

N

D

45.7

± 0

.3

NA

N

A

NA

MU

FA

554.

1 ±

43.9

b 12

0.4

± 5.

7c 8.

1 ±

6.1c

1338

.2 ±

113

.2a

***

***

***

C

18PU

FA

661.

6 ±

34.9

b 41

1.9

± 22

.9bc

46

.5 ±

1.5

c 33

76.6

± 2

08.4

a **

* **

* **

*

LC-P

UFA

16

95.1

± 1

02.7

a 10

49.5

± 5

3.3b

171.

5 ±

5.9c

136.

9 ±

22.8

c **

* **

* **

*

Tota

l n-3

16

88.5

± 1

03.5

a 11

01.8

± 5

6.7b

125.

2 ±

5.8c

116.

7 ±

20.9

c **

* **

**

Tota

l n-6

66

8.1

± 34

.3b

359.

5 ±

19.9

bc

92.8

± 1

.8c

3396

.9 ±

209

.2a

***

***

***

Elon

gatio

n ^

SF

A

73.0

± 1

0.1d

3154

.3 ±

297

.9b

4894

.0 ±

205

.1a

1301

.4 ±

438

.2c

***

NS

***

M

UFA

N

D

ND

17

.8 ±

3.5

N

D

NA

N

A

NA

C18

PUFA

N

D

ND

N

D

ND

N

A

NA

N

A

LC

-PU

FA

ND

11

8.5

± 7.

1a 55

.4 ±

1.0

b 65

.1 ±

2.9

b N

A

NA

N

A

To

tal n

-3

ND

11

8.5

± 7.

1a 55

.4 ±

1.0

b 65

.1 ±

2.9

b N

A

NA

N

A

To

tal n

-6

ND

N

D

ND

N

D

NA

N

A

NA

D

esat

urat

ion

SC

D (Δ

-9 D

es.)

2.4

± 2.

4c 46

6.7

± 60

.9b

1138

.0 ±

41.

2a 19

.2 ±

14.

0c **

**

* **

*

FAD

S2 (Δ

-6 D

es.)

ND

N

D

29.1

± 1

.2

40.1

± 1

.6

NA

N

A

NA

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110 | P a g e

There was a significant interaction in the plasma GLDH enzyme with an

elevated level present in the n-6 PL treatment which was dependant on the omega

status (Table 5.9). Similarly, there was a significant interaction noted on plasma

creatinine levels with an elevated level in the n-6 PL fish which was dependent on

the omega status. The plasma cholesterol level was significantly elevated in the n-3

PL treatment and lowest in the n-6 NL and n-6 PL treatments. Circulating protein

levels in the plasma were significantly higher in the phospholipid class treatments.

Among the haematological parameters, Hb was significantly elevated in the n-3 NL

fish and haptoglobin was significantly elevated in the n-6 PL fish (Table 5.9).

5.3.3 Gene expression

Several significant differences were observed in the expression of genes related to

fatty acid metabolism (Figure 5.1). There was a significant interaction in the relative

gene expression of Lc ACYL, Lc FAS and Lc FADS2 with increased expression in the

n-6 PL treatment that was dependent on the lipid class. The expression of these genes

was at least 1.5-fold higher in the n-6 PL compared to the n-3 PL treatments. There

was also a significant interaction effect in the modification of Lc CPT1α expression

by the phospholipid-rich ingredients which was dependent on the omega status. The

expression of Lc CPT1α was down regulated by approximately 1.5-fold in the n-3 PL

compared to the control. Similarly, the expression of Lc SCD was significantly up

regulated in the n-6 treatments compared to the n-3 treatments and there was no

interaction effect observed. The expression of Lc ELOVL5 in all treatments was

down regulated compared to the initial fish levels and there were no significant

differences among the treatments.

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111

| Pa

ge

Tab

le 5

. 9 P

lasm

a ch

emis

try

of b

arra

mun

di fe

d ex

peri

men

tal d

iets

for

eigh

t wee

ks. D

ata

(n=3

) are

pre

sent

ed a

s mea

n ±

SEM

.

CK

, cre

atin

e ki

nase

; ALT

, ala

nine

am

inot

rans

fera

se; G

LDH

, glu

tam

ate

dehy

drog

enas

e.

‘ * ’

< 0.

05, ‘

**

’ < 0

.01,

‘ **

* ’ <

0.0

01; s

uper

scrip

t let

ters

indi

cate

sign

ifica

nt d

iffer

ence

s am

ong

mea

ns.

† Tw

o-w

ay fa

ctor

ial A

NO

VA

, df 1

,1,1

,8, p

ost-h

oc T

ukey

's H

SD

NS,

not

sign

ifica

nt P

> 0

.05.

D

iets

Test

n-

3 N

L

(Fis

h)

n-3

PL

(Kril

l) n-

6 N

L

(Soy

bean

) n-

6 PL

(L

ecith

in)

Om

ega

Cla

ss

Inte

ract

ion

CK

(U/L

) 74

86.3

± 3

156.

8 33

94.0

± 1

048.

1 36

67.7

± 6

31.9

35

91.0

± 1

076.

3 N

S N

S N

S A

LT (U

/L)

8.7

± 4.

3 4.

3 ±

1.5

5.7

± 4.

3 9.

0 ±

3.9

NS

NS

NS

GLD

H (U

/L)

10.0

± 2

.6 a

9.3

± 6.

5 a

11.3

± 3

.0 a

24.7

± 8

.3 b

***

***

***

Ure

a (m

mol

/L)

2.9

± 0.

6 2.

2 ±

0.4

3.1

± 0.

5 3.

0 ±

0.3

NS

NS

NS

Cre

atin

ine

(um

ol/L

) 22

.7 ±

0.3

a 23

.3 ±

1.1

a 21

.7 ±

1.0

a 28

.0 ±

1.2

b *

***

**

Ca

(mm

ol/L

) 3.

2 ±

0.1

3.0

± 0.

2 3.

3 ±

0.2

3.3

± 0.

1 N

S N

S N

S M

g (m

mol

/L)

1.8

± 0.

2 1.

4 ±

0.6

1.6

± 0.

2 1.

7 ±

0.3

NS

NS

NS

Phos

phat

e (m

mol

/L)

3.6

± 0.

2 3.

3 ±

0.2

3.7

± 0.

4 4.

0 ±

0.3

NS

NS

NS

Cho

lest

erol

(mm

ol/L

) 5.

6 ±

0.3

ab

6.8

± 0.

2 a

4.4

± 0.

6 b

4.4

± 0.

3 b

***

* *

Tota

l Pro

tein

(g/L

) 48

.1 ±

1.2

a 49

.9 ±

2.8

ab

48.1

± 0

.9 a

54.3

± 0

.8 b

NS

**

NS

Alb

umin

(g/L

) 13

.6 ±

0.5

13

.8 ±

0.9

14

.1 ±

0.4

16

.0 ±

0.4

N

S N

S N

S Fe

(um

ol/L

) 21

.5 ±

0.7

21

.7 ±

1.0

19

.6 ±

2.6

27

.1 ±

2.6

N

S N

S N

S H

b (m

g/m

l) 0.

26 ±

0.5

b 0.

10 ±

0.1

a 0.

07 ±

0.7

a 0.

14 ±

0.9

ab

NS

NS

**

Hap

togl

obin

(mg/

ml)

1.3

± 0.

1 a

1.3

± 0.

1 a

1.3

± 0.

1 ab

1.

4 ±

0.1

b **

N

S N

S

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112 | P a g e

Figure 5. 1 Hepatic gene expression of selected lipid metabolism genes in juvenile barramundi (Lates calcarifer) after eight weeks of feeding. Relative expression is calculated for each gene using cycle threshold values, normalised to control genes (Elongation factor 1a and Luciferase). Values are shown as log-2 fold change relative to the initial fish. Letters above error bars indicate significant differences between the treatments. Analysed by two-way factorial ANOVA, df 1,1,1,8, post-hoc Tukey's HSD.

-2.5

-2.0

-1.5

-1.0

-0.5

0.0

0.5

1.0

1.5

Rela

tive

fold

cha

nge

Lc ACYL

N-3 NL N-3 PL N-6 NL N-6 PL

Omega P=0.06Class P=0.72Interaction P<0.05

-3.5

-3.0

-2.5

-2.0

-1.5

-1.0

-0.5

0.0

0.5

1.0 Lc CPT1α

N-3 NL N-3 PL N-6 NL N-6 PL

abab

b

a

Omega P=0.98Class P=0.08Interaction P<0.01

-3.5

-3.0

-2.5

-2.0

-1.5

-1.0

-0.5

0.0

0.5 Lc ELOVL5

N-3 NL N-3 PL N-6 NL N-6 PL

Omega P=0.38Class P=0.88Interaction P=0.16

-3.5

-3.0

-2.5

-2.0

-1.5

-1.0

-0.5

0.0

0.5

1.0

1.5 Lc FADS2

N-3 NL N-3 PL N-6 NL N-6 PL

a

b

c

bcOmega P<0.001Class P=0.07Interaction P<0.01

-2.5

-2.0

-1.5

-1.0

-0.5

0.0

0.5

1.0

1.5 Lc FAS

N-3 NL N-3 PL N-6 NL N-6 PL

ab

a

c

bc

Omega P<0.001Class P=0.72Interaction P<0.01

-2.0

-1.0

0.0

1.0

2.0

3.0

4.0

Rela

tive

fold

cha

nge

Lc SCD

N-3 NL N-3 PL N-6 NL N-6 PL

a

abab

b

Omega P<0.05Class P=0.11Interaction P=0.73

a

abab

b

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5.4 Discussion

It is well established that larval and early juvenile fish have a dietary requirement for

intact phospholipids that can lead to long term improvements in many growth

performance parameters (Coutteau et al., 1997; Tocher et al., 2008). Historically

most phospholipid studies were conducted with commercial phospholipid

preparations of commonly available emulsifying agents such as lecithin from

soybeans or corn (Tocher et al., 2008). However, in some cases the use of these

products has potentially led to unclear requirement data as the composition of polar

lipid and polar lipid classes is seldom reported and there are other potential

interacting effects of the ingredients themselves. The aims of the present study were

to provide an up to date assessment of the physiological and metabolic effect of

commercially available preparations of phospholipid-rich ingredients such as krill oil

and soybean lecithin against neutral lipid-rich ingredients such as fish oil and

soybean oil in juvenile barramundi.

Based on the performance data of the present study, it is clear that for

barramundi in the range of ~47 to ~238 g, a response to the lipid ingredients was

evident. It should be noted that each of the diets were prepared with a minimum (1%

diet) inclusion of FO in order to prevent the onset of essential fatty acid deficiency

(Salini et al., 2015c). The growth, feed intake and FCR of the n-3 NL and n-3 PL fed

fish were nearly identical. Despite the n-6 PL fed fish being statistically the same

weight as the two n-3 diets they consumed significantly more feed which resulted in

a higher FCR. Many studies have clearly demonstrated that growth potential is

driven by the demand for energy (derived mostly from protein and lipid) in this

species (Glencross et al., 2013). However, the diets in the present study were

equivalent in digestible energy and the n-6 PL fish consumed more feed to maintain

growth, comparable to the control (n-3 NL) fish suggesting that the difference in

FCR is attributable to the lipid ingredients. Therefore this suggests that the lecithin

was poorly utilised by the fish as also supported by numerically lower lipid retention

in this treatment. There may be other features of the soybean lecithin that contributed

to the results observed, however, investigation of these was beyond the objectives of

the present study.

A recent study on dietary phospholipids in Atlantic salmon over a range of

sizes (from first feeding to ~60 g) found that at 2.6% phospholipid in the form of

soybean lecithin reduced growth performance and FCR (Taylor et al., 2015).

However, the most profound negative effect of soybean lecithin on growth rate

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(SGR) was in early phase (first feeding to 2.5 g) rather than the latter stages of

growth studied. It should be clearly noted that the diets used in the present study

included 7.2% added lipid to a base of 1% fish oil. Based on the analysed

composition of the diets used in the present study, the determined level of

phospholipid in the lecithin diet was around 5.8% and the krill diet was around 4.0%.

It is unclear whether this level of inclusion could have influenced the growth

performance of the n-6 PL fed fish. In the study of Taylor et al. (2015), the inclusion

of krill oil above 2.6% phospholipid led to a decrease in the growth of Atlantic

salmon; however, no effect of krill oil was seen in the present study. They reasoned

that the difference could be due to the reduced energy availability of phospholipid-

rich oils compared to that of neutral lipid oils that are mostly triacylglycerol (Taylor

et al., 2015).

In larval fish, the digestibility of diets containing phospholipids is

consistently better than control diets, mostly owing to their emulsifying effect

leading to better absorption by the developing gut system (Coutteau et al., 1997;

Tocher et al., 2008). In contrast, the juvenile barramundi fed soybean lecithin in the

present study had the lowest total lipid digestibility potentially owing to its physical

characteristics rather than its chemical composition. However, the most abundant

fatty acid in the phospholipid fraction of the n-6 PL diet was 18:2n-6 and this was

also significantly less digestible leading to the lowest total C18PUFA digestibility.

These reductions in digestibility most likely also led to the poor FCR observed in

that treatment group. However, it is unclear whether these effects are caused by the

phospholipid composition or another feature of the ingredient as the same effects

were not replicated in the krill oil fed fish.

A further interesting result of the present study was that the n-6 NL fed fish

ate less and consequently grew less than the n-3 treatments with no difference in

FCR. The digestibility was also high for the total lipid and all the dominant fatty

acids in fish fed the n-6 NL diet. This reduction in growth might be explained by

several mechanisms. Firstly, soybean oil lacks any measureable n-3 LC-PUFA and to

some extent is also likely to be pro-inflammatory due to the high proportion of

omega-6 fatty acids (Brown and Hart, 2011; Turchini et al., 2009). However, the

reduced growth response should also have been expected in the n-6 PL fed fish as the

fatty acid composition of the raw ingredients is quite similar.

Of all the studies investigating the use of soybean oil, growth reduction is

rarely reported in fish (Brown and Hart, 2011; Glencross, 2009). In a study by Raso

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115 | P a g e

and Anderson (2003) they found that although juvenile barramundi fed soybean oil

grew slightly less than the controls it was not confirmed statistically and the FCR

also remained unchanged. However, in a select group of marine species, such as the

black sea bream (Acanthopagrus schlegeli), Japanese flounder (Paralichthys

olivaceous), red sea bream (Pagrus auratus), silver bream (Rhabdosargus sarba) and

cobia (Rachycentron canadum), feeding exclusively with soybean oil has led to

differences in growth performance. Most simply put, this was likely caused by

essential fatty acid (EFA) deficiency rather than another unique feature of the

soybean oil itself (Brown and Hart, 2011; Trushenski et al., 2012).

Another more recent hypothesis is that certain fatty acids including 18:2n-6

may influence feed intake by modulating the expression of ‘satiety’ and ‘hunger’

hormones via various signalling pathways, for example neuropeptide Y or Agouti-

related protein (NPY and AGRP respectively), however, this is yet to be thoroughly

explored in teleost fish (Coccia et al., 2014; Liland et al., 2013; Schwartz et al.,

2000). Therefore, in light of the many possibilities, the fish fed the n-6 NL (soybean

oil) diet in the present study were likely to be EFA deficient. However, the same

effect did not manifest itself in the n-6 PL fish, indicating a marginal improvement

owing to the phospholipid content of the diet.

In the present study, the whole body fatty acid composition mostly resembled

the diet profiles as previously reported in the vast majority of studies (Rosenlund et

al., 2011). Despite the varied NL and PL composition of the diets used in the present

study, it was clear that the proportion of NL and PL in the whole body was tightly

regulated. However, there were some changes to the fatty acid composition of both

the NL and PL fraction of the whole body, consistent with other studies. In larval fish

such as sea bream, increasing marine derived PL led to better assimilation of n-3 FA

whereas soybean lecithin PL increased assimilation of n-6 FA (Saleh et al., 2015).

Alhazzaa et al. (2011b) correlated the up regulation of fatty acid synthesis genes

(FADS2 and ELOVL5) with highly selective fatty acid retention in muscle and liver

PL of juvenile barramundi fed vegetable oils. Other studies have also demonstrated

that the LC-PUFA composition of the PL fraction of certain tissues is tightly

regulated in the absence of adequate dietary supply (Skalli et al., 2006). In the

present study, this effect was seen with the n-6 NL (soybean oil) fish able to retain

numerically more n-3 LC-PUFA than the n-6 PL fish. Moreover, 18:2n-6 was

preferentially retained in the n-6 NL fed fish.

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In the present study, the apparent in vivo whole body mass-balance of specific

fatty acids was calculated to determine discrete differences in metabolism (Turchini

et al., 2007). The LC-PUFA β-oxidation activity was highest in the n-3 NL followed

by the n-3 PL fish, typical of when barramundi and other species are fed excess LC-

PUFA (Salini et al., 2015c; Stubhaug et al., 2007). The high elongation of SFA and

delta-9 desaturation activity in the n-6 NL fish suggests an attempt to generate 18:1n-

9 as an available energy source. However, there was no corresponding increase in β-

oxidation of MUFA and moreover the same effect was not recorded in the n-6 PL

fish. It is unclear as to why they would invest energy into elongation and delta-9

desaturation processes with no further downstream effect; however, it clearly

indicates a modified metabolic function that could be part of a compensatory

mechanism when EFA are deficient. Moreover, it is difficult to correlate the mass-

balance computations with the quantitative gene expression analysis used in the

present study as different enzymes are involved throughout the fatty acid metabolic

pathway. However, the mass-balance results do correlate with those previously

reported in barramundi and other species fed alternative oils (Francis et al., 2007;

Salini et al., 2015c; Turchini et al., 2013).

The biochemical analysis of the plasma and the hepatic gene expression

potentially indicate a modified metabolic pattern, particularly as a result of the n-6

lipids, soybean lecithin and to a lesser extent soybean oil. However, there were no

dramatic sub-clinical pathologies noted indicating the potential relevance of these

changes. Creatinine kinase (CK) levels were numerically highest in the n-3 NL fed

fish and although there is a general lack of data in this and other teleost species it

could be argued that these fish were in a diseased state (Nanji, 1983; Sandnes et al.,

1988). However, it may also be reasoned that these are the normal enzyme levels as

they are the control group of this study. The elevated glutamate dehydrogenase

(GLDH) activity, creatinine level and total protein in the plasma of the n-6 PL fish

are potentially indicative of organ failure or dehydration that can be characterised by

the depletion of hepatic LC-PUFA stores (Van Waes and Lieber, 1977; Videla et al.,

2004). However, the plasma enzyme markers (eg GLDH and ALT) are typically used

in combination to confirm a clinical diagnosis and in the present study there is not

adequate evidence to support this. In contrast, none of the plasma markers were

elevated in the n-6 NL fed fish. In addition, several authors have reasoned that

together elevated GLDH and plasma urea are implicated in osmoregulatory processes

leading to clinical pathologies such as subcutaneous haemorrhaging (Glencross and

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Rutherford, 2011; Morton et al., 2014). However, in the present study these

pathologies were not present and moreover the plasma urea content was unaffected

suggesting that the lipid sources used were nutritionally adequate unlike those of the

previously mentioned studies. Further work is clearly warranted in this area to

resolve some of the discrepancies relating to clinical diagnosis in barramundi and

other teleosts.

The hepatic expression of genes related to fatty acid synthesis (Lc ACYL and

Lc FAS) and delta-6 and delta-9 desaturation (Lc FADS2 and Lc SCD), were also

significantly up regulated in n-6 PL fed fish. These transcriptional changes suggest

that there was potentially a metabolic modification in the liver and that the fish might

have a limited ability to respond to the soybean lecithin. Recent studies have shown

similar nutritional regulation of fatty acid metabolism related genes with soybean oil

(Li et al., 2016); however, the same effect of soybean oil (diet n-6 NL) was not

replicated to the same extent in the present study. Interestingly, the expression of Lc

CPT1α, which is considered to be the initial step in the mitochondrial β-oxidation of

fatty acids, was dependent on the omega status being significantly down regulated in

the n-3 PL fish compared to the n-3 NL fish (Frøyland et al., 1998). Moreover, the

apparent in vivo β-oxidation of SFA, MUFA and PUFA was also significantly lower

in the n-3 PL treatment which may indicate an active anti-oxidant effect of

phospholipid rich lipids of marine origin such as krill (Saito and Ishihara, 1997).

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6.0 Rapid effects of essential fatty acid deficiency on growth and

development parameters and transcription of key fatty acid

metabolism genes in juvenile barramundi Lates calcarifer

Adapted from

Salini, M.J., Turchini, G.M., Wade, N., Glencross, B.D., 2015. Rapid effects of

essential fatty acid deficiency on growth and development parameters and

transcription of key fatty acid metabolism genes in juvenile barramundi Lates

calcarifer. Br. J. Nutr. 114, 1784-1796

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6.1 Aims

Essential fatty acids (EFA) play an important physiological role in both larval and

juvenile barramundi while less is known about the effects on larger fish. Despite the

efforts of numerous studies so far, there remains to be a clear analysis of the onset

and progression of EFA deficiency in barramundi. Therefore, the aim of this

experiment was to document the aetiology of essential fatty acid deficiency in

juvenile barramundi. It was hypothesised that once the endogenous reserves of LC-

PUFA were progressively depleted then sub-clinical EFA deficiency symptoms

would develop before further gross clinical signs become evident.

6.2 Materials and methods

The methodology used in the present experiment are detailed in the section 2.0

General methodology. Ethical clearance was approved for the experimental

procedures by the CSIRO Animal Ethics Committee (Application A10/2013). The

chemical composition of the main dietary ingredients is presented in Table 6.1. The

formulation and chemical composition of the three diets are presented in Table 6.2.

Real-Time PCR primers specific to each gene are presented in Table 6.3.

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122

| Pa

ge

Tab

le 6

. 1 C

hem

ical

com

posi

tion

of in

gred

ient

s use

d in

exp

erim

enta

l die

ts, a

ll va

lues

are

g/k

g un

less

oth

erw

ise

stat

ed.

Any

val

ues <

0.01

are

repo

rted

as 0

.1; N

A, N

ot a

naly

sed;

ND

, Not

det

ecte

d #

Fish

mea

l was

def

atte

d us

ing

hexa

ne.

Fish

m

eal#

Poul

try

mea

l So

y is

olat

e W

heat

gl

uten

W

heat

flo

ur

Cas

ein

Whe

at

star

ch

Fish

oi

l O

live

oil

Palm

oi

l Pa

lm

flake

Com

posi

tion

Dry

mat

ter

984

958

958

927

839

924

836

992

987

999

994

Pr

otei

n 78

9 64

1 89

5 82

3 11

2 87

0 5

4 4

3 4

A

sh

163

138

46

1 6

11

3 1

ND

N

D

ND

Lipi

d 46

15

1 57

55

22

5

1 95

6 97

3 96

3 98

6

Car

bohy

drat

e 2

70

2 12

1 86

0 11

3 99

2 39

23

34

10

Gro

ss e

nerg

y (M

J/kg

) 18

.9

20.4

21

.8

21.2

15

.3

21.9

14

.5

39.3

39

.5

39.5

39

.3

Fatty

aci

ds (%

) ^

Tota

l FA

(mg/

g lip

id)

625.

0 63

8.8

NA

N

A

NA

N

A

NA

59

6.4

879.

5 86

7.8

749.

8

22:6

n-3

19.9

N

D

NA

N

A

NA

N

A

NA

14

.2

ND

N

D

ND

22:5

n-3

2.2

ND

N

A

NA

N

A

NA

N

A

2.1

ND

N

D

ND

20:5

n-3

9.0

0.5

NA

N

A

NA

N

A

NA

11

.3

ND

N

D

ND

20:4

n-6

2.5

0.6

NA

N

A

NA

N

A

NA

1.

5 N

D

ND

N

D

18

:3n-

3 0.

8 1.

0 N

A

NA

N

A

NA

N

A

1.0

1.0

ND

N

D

18

:2n-

6 1.

7 11

.0

NA

N

A

NA

N

A

NA

2.

0 11

.0

6.7

ND

18:1

15

.5

43.8

N

A

NA

N

A

NA

N

A

18.6

73

.8

34.6

0.

4

18:0

8.

7 8.

6 N

A

NA

N

A

NA

N

A

5.1

3.0

4.6

51.3

16:0

25

.8

25.4

N

A

NA

N

A

NA

N

A

22.9

9.

9 51

.9

46.2

SFA

39

.8

36.1

N

A

NA

N

A

NA

N

A

36.4

13

.4

58.6

99

.6

M

UFA

22

.2

50.8

N

A

NA

N

A

NA

N

A

29.1

74

.6

34.7

0.

4

PUFA

3.

4 12

.0

NA

N

A

NA

N

A

NA

4.

9 12

.0

6.7

ND

LC-P

UFA

34

.5

1.2

NA

N

A

NA

N

A

NA

29

.7

ND

N

D

ND

Tota

l n-3

32

.7

1.6

NA

N

A

NA

N

A

NA

30

.5

1.0

ND

N

D

To

tal n

-6

5.2

11.6

N

A

NA

N

A

NA

N

A

4.1

11.0

6.

7 N

D

Page 124: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

123

| Pa

ge

^ A

ll fa

tty a

cids

are

pre

sent

ed a

s a p

erce

ntag

e of

the

tota

l fat

ty a

cids

. Qua

ntita

tive

data

can

be

obta

ined

by

mul

tiply

ing

the

tota

l FA

(mg/

g lip

id) b

y sp

ecifi

c fa

tty a

cids

(%).

18:

1, su

m o

f 18:

1n-7

, 18:

1n-9

cis

, 18:

1n-9

tran

s; sa

tura

ted

fatty

aci

ds (S

FA),

sum

of 1

2:0,

14:

0, 1

6:0,

18:

0, 2

0:, 2

2:0,

24:

0;

mon

ouns

atur

ated

fatty

aci

ds (M

UFA

), su

m o

f14:

1n-5

, 16:

1n-7

, 18:

1n-7

, 18:

1n-9

(cis

and

tran

s), 2

0:1n

-7, 2

0:1n

-9, 2

2:1n

-9, 2

4:1n

-9; p

olyu

nsat

urat

ed

fatty

aci

ds (P

UFA

), su

m 1

8:2n

-6 (c

is a

nd tr

ans)

, 18:

3n-6

, 18:

3n-3

, 18:

4n-3

; lon

g ch

ain

poly

unsa

tura

ted

fatty

aci

ds (L

C-P

UFA

), su

m 2

0:2n

-6, 2

0:3n

-6,

20:4

n-6,

22:

4n-6

, 2-:3

n-3,

20:

5n-3

, 22:

5n-3

, 22:

6n-3

; n-3

, sum

of o

meg

a 3

PUFA

and

LC

-PU

FA; n

-6, s

um o

f om

ega

6 PU

FA a

nd L

C-P

UFA

.

Page 125: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

124 | P a g e

Table 6. 2 Formulation and composition of experimental diets, all values are g/kg DM unless stated.

a Ridley aquafeeds, Narangba, QLD, Australia. Fish meal defatted using hexane. b Manildra Group, Rocklea, QLD, Australia c Bulk Powders, www.bulkpowders.com.au d Vitamin and mineral premix (g/kg of premix): vitamin A, 0.75 mg; vitamin D3, 6.3 mg; vitamin E, 16.7 g; vitamin K3, 1.7 g; vitamin B1, 2.5 g; vitamin B2, 4.2 g; vitamin B3, 25 g; vitamin B5, 8.3 g; vitamin B6, 2.0 g; vitamin B9, 0.8 g; vitamin B12, 0.005 g; biotin, 0.17 g; vitamin C, 75 g; choline, 166.7 g; inositol, 58.3 g; ethoxyquin, 20.8 g; copper, 2.5 g; ferrous iron, 10.0 g; magnesium, 16.6 g; manganese, 15.0 g; zinc, 25.0 g e Yttrium oxide; Stanford Materials, Aliso Viejo, California, United States f Sydney Essential Oil Co. (Sydney, NSW, Australia)

FO CTRL FO LOW FO FREE Formulation Defatted fish meal a 150 150 150 Poultry meal a 150 150 150 Soy protein isolate b 150 150 150 Wheat gluten b 150 150 150 Wheat flour b 109 109 109 Casein c 100 100 100 Pregelled wheat starch 80 80 80 DL-Methionine 10 10 10 Di-calcium phosphate 10 10 10 Pre-mix vitamins d 8 8 8 Yttrium oxide e 1 1 1 Fish oil a 82 10 0 Olive oil f 0 36 41 Palm Oil f 0 18 20 Palm Flake f 0 18 20 Composition Dry matter 940 939 945 Protein 598 588 603 Ash 64 64 66 Lipid 126 123 122 Carbohydrate 204 219 202 Gross energy (MJ/kg) 21.5 21.3 21.6 Fatty acids (% total) Total FA (mg/g lipid) 681.8 708.4 717.4 22:6n-3 10.6 2.0 0.9 22:5n-3 1.6 0.1 0.1 20:5n-3 8.1 1.3 0.5 20:4n-6 1.2 0.3 0.1 18:3n-3 1.3 1.1 1.0 18:2n-6 10.0 13.0 13.2 18:1 22.7 38.8 41.1 18:0 5.5 11.9 12.6 16:0 22.9 27.0 27.6 SFA 34.5 41.2 41.8 MUFA 31.3 41.1 42.5 PUFA 12.7 14.1 14.3 LC-PUFA 21.5 3.7 1.4 Total n-3 22.9 4.4 2.4 Total n-6 11.3 13.4 13.2

Page 126: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

125

| Pa

ge

Tab

le 6

. 3 R

eal-t

ime

qPC

R p

rim

er p

airs

for

targ

et g

enes

invo

lved

in fa

tty a

cid

met

abol

ism

.

Targ

et g

ene

Abb

revi

atio

n EC

num

ber

Prim

er n

ame

Sequ

ence

Le

ngth

Fa

tty a

cid

met

abol

ism

Lat

es c

alca

rife

r

Fatty

aci

d sy

ntha

se

Lc F

AS

EC 2

.3.1

.85

FAS

qPC

R.F

or 1

TG

AA

TCTC

AC

CA

CG

CTT

CA

G

20

FAS

qPC

R.R

ev 1

A

GG

CA

GC

AA

TAG

AA

CC

CTC

A

20

St

eroy

l CoA

des

atur

ase

Lc S

CD

EC

1.1

4.19

.1

SCD

qPC

R.F

or 1

C

CTG

GTA

CTT

CTG

GG

GTG

AA

20

SC

D q

PCR

.Rev

1

AA

GG

GG

AA

TGTG

TGG

TGG

TA

20

C

arni

tine

palm

itoyl

trans

fera

se

Lc C

PT1a

EC

2.3

.1.2

1

CPT

1A q

PCR

.For

1

TGA

TGG

TTA

TGG

GG

TGTC

CT

20

CPT

1A q

PCR

.Rev

1

CG

GC

TCTC

TTC

AA

CTT

TGC

T 20

ATP

citr

ate

lyas

e Lc

ACY

L EC

2.3

.3.8

Lc

al A

CY

L F1

C

AA

CA

CC

ATT

GTC

TGTG

CTC

20

Lc

al A

CY

L R

1 G

AA

ATG

CTG

CTT

AA

CA

AA

GTC

C

21

Fa

tty a

cid

elon

gatio

n 5

Lc E

LOVL

5 EC

2.3

.1.n

8

Lcal

ELO

VL5

F1

ATC

CA

GTT

CTT

CTT

AA

CC

GT

20

Lcal

ELO

VL5

R1

GG

TTTC

TCA

AA

TGTC

AA

TCC

AC

22

Fatty

aci

d de

satu

rase

6

Lc F

ADS2

EC

1.1

4.19

.- Lc

al F

AD

S2 F

1 TC

ATA

CTA

CC

TTC

GC

TAC

TTC

TC

23

Lcal

FA

DS2

R1

AC

AA

AC

CA

GTG

AC

TCTC

CA

G

20

Refe

renc

e

Lu

cife

rase

Lu

c N

A

Luc

qPC

R F

G

GTG

TTG

GG

CG

CG

TTA

TTTA

20

Lu

c qP

CR

R

CG

GTA

GG

CTG

CG

AA

ATG

C

18

El

onga

tion

fact

or 1

alp

ha

EF1α

N

A

Lcal

EF1α

F A

AA

TTG

GC

GG

TATT

GG

AA

C

19

Lcal

EF1α

R

GG

GA

GC

AA

AG

GTG

AC

GA

C

18

NA

. Not

ava

ilabl

e

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126 | P a g e

6.3 Results

6.3.1 Growth and feed utilisation

During the 56 d growth assay, the fish responded readily to the experimental diets

and growth in the control group was consistent with the predicted model growth,

achieving 106% of the modelled potential (Glencross and Bermudes, 2012). When

analysed by one-way ANOVA there was a significant difference in live-weight after

two weeks of feeding on the experimental diets, with the fish fed the FO LOW and

FO FREE diets being smaller from those fed the FO CTRL diet. By six weeks of

feeding there was a significant difference among all three groups of fish and this

remained the same at eight weeks. The same results were found with weight gained

(Table 6.4). When the live-weight, weight gain and FCR data were analysed with a

repeated measures design there was a significant interaction effect of the diets after

controlling for time (repeated) measurements (Table 6.5). There was no difference in

feed intake among the groups of fish, however, there was a significant difference in

feed conversion (FCR) between the FO CTRL and FO FREE fed fish (Table 6.4 and

6.5). There were no differences in terms of survival with only one fish removed from

the system.

The total lipid was significantly more digestible in the FO CTRL fed fish than

the FO FREE fed fish (Table 6.6). There were several significant differences in

specific fatty acid digestibility. The n-3 LC-PUFA including EPA and DHA were all

completely digested by the fish fed FO LOW and FO FREE diets whereas the FO

CTRL fed fish digested less of these fatty acids (Table 6.6). Although significant, the

numerical differences were minor. The digestibility of total saturated fatty acids

(SFA) was significantly different with fish fed the FO FREE diet able to digest more

than the fish fed the FO CTRL diet.

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127 | P a g e

Table 6. 4 Growth performance and feed utilisation of barramundi fed experimental diets for eight weeks.

FCR, Feed conversion ratio P SEM, Pooled standard error mean, P<0.001*** P<0.01** P<0.05*. Superscript letters indicate significant differences among means. One-way ANOVA df 2,6, post-hoc Tukey's HSD Percentage data were arcsine transformed prior to analysis Any values <0.01 are reported as 0.1; NA, Not analysed.

FO CTRL FO LOW FO FREE P

SEM ANOVA Live-weight initial (g) 46.9 46.9 46.8 0.07 F=0.1, P=0.89 Live-weight WK2 (g) 92.7b 85.8a 87.4a 1.18 F=10.8 * Live-weight WK4 (g) 139.2b 130.6a 125.9a 2.07 F=23.7 ** Live-weight WK6 (g) 185.0c 173.9b 162.9a 3.40 F=22.3 ** Live-weight WK8 (g) 238.3c 218.9b 202.8a 5.26 F=56.4 *** Gain (g/fish) 191.4c 172.1b 156.0a 5.24 F=58.5 *** Feed intake (g/fish) 209.6 196.3 207.9 3.91 F=1.2, P=0.36 FCR 1.10a 1.14ab 1.33b 0.04 F=12.9 ** Protein retention (%) 34.1a 30.3b 27.8b 1.01 F=13.7 ** Lipid retention (%) 74.8a 61.7a 44.8b 4.61 F=24.2 ** Energy retention (%) 37.8a 34.5a 29.8b 1.30 F=11.4 ** Survival (%) 98 100 100 0.01 NA Abnormalities (%) 4.0a 2.0a 41.0b 0.08 F=6.8 * Behaviour index 1.9 1.7 1.8 2.8 F=4.0, P=0.08

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128 | P a g e

Table 6. 5 Split-plot analysis of variance for repeated measures design of growth performance and feed utilisation parameters in juvenile barramundi.

Two-way repeated measures ANOVA, df residuals 6,24 (live-weight), df residuals 6,18 (Gain, FCR, Intake). FCR, Feed conversion ratio

Source of variation Degrees of freedom F value P (>F) Live-weight (g) Diet 2 44.6 < 0.001 Week 4 7341 < 0.001 Diet:Week 8 26.4 < 0.001 Gain (g/fish) Diet 2 48.7 < 0.001 Week 3 4659 < 0.001 Diet:Week 6 20.9 < 0.001 Feed intake (g/fish) Diet 2 2.3 0.18 Week 3 1681 < 0.001 Diet:Week 6 0.9 0.52 FCR Diet 2 11.7 < 0.01 Week 3 345.8 < 0.001 Diet:Week 6 11.5 < 0.001

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129 | P a g e

Table 6. 6 Apparent digestibility of macro nutrients and fatty acids present in the experimental diets.

P SEM, Pooled standard error mean P<0.05 *. Superscript letters indicate significant differences among means. One-way ANOVA df 2,6, post-hoc Tukey's HSD. Percentage data were arcsine transformed prior to analysis Any values <0.01 are reported as 0.1; NA, Not analysed.

FO CTRL FO LOW FO FREE PSEM ANOVA Dry matter (%) 64.3 70.8 65.4 1.5 F=4.3, P=0.10 Protein (%) 91.6 93.0 94.1 0.4 F=4.4, P=0.08 Total lipid (%) 90.7a 87.1ab 84.6b 1.5 F = 8.1 * Energy (%) 87.3 85.7 88.7 0.7 F=2.4, P=0.19 22:6n-3 (%) 98.5 100.0 100.0 0.6 NA 22:5n-3 (%) 100.0 100.0 100.0 0.0 NA 20:5n-3 (%) 99.0 100.0 100.0 0.2 NA 20:4n-6 (%) 100.0 100.0 100.0 0.0 NA 18:3n-3 (%) 98.6 100.0 100.0 0.6 NA 18:2n-6 (%) 95.8 96.0 95.6 0.6 F=0.2, P=0.84 18:1 (%) 92.1 93.9 92.9 0.6 F=1.6, P=0.30 18:0 (%) 76.7a 70.9ab 65.6b 2.6 F=9.4* 16:0 (%) 81.5 77.0 73.7 2.1 F=4.7, P=0.9 SFA (%) 82.3a 76.0ab 71.8b 2.4 F = 8.0 * MUFA (%) 92.6 94.0 92.8 0.5 F=1.1, P=0.41 PUFA (%) 96.5 96.3 96.0 0.6 F=0.5, P=0.66 LC-PUFA (%) 98.9 100.0 100.0 0.4 NA Total n-3 (%) 98.9 100.0 100.0 0.4 NA Total n-6 (%) 96.3 96.1 95.6 0.5 F=0.5, P=0.64

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130 | P a g e

6.3.2 Biochemical analysis

There were significant differences in macro nutrient retention of the fish after eight

weeks of feeding with the control fed fish retaining more protein, lipid and gross

energy than the FO LOW and FREE fed fish (Table 6.4). Generally, the fatty acid

composition of the diets was reflected in the whole fish and also the liver tissue

(Table 6.7). There were significant differences in most of the dominant fatty acids in

the whole-body with the only exceptions being 18:3n-3 and 16:0 (Table 6.7).

Similarly, in the liver, there were significant differences in most of the dominant

fatty acids with the exception of 18:2n-6, 18:3n-3 and 16:0 (Table 6.7).

After eight weeks, there was a significant decrease in the retention of SFA,

MUFA and PUFA in the FO LOW and FO FREE fed fish compared to the FO CTRL

fed fish while the LC-PUFA retention was highest in the FO LOW fed fish (Figure

6.1). In terms of calculated β-oxidation values there was significantly less oxidation

of total SFA and MUFA in the FO CTRL fed fish. There was no difference in PUFA

oxidation yet significantly more LC-PUFA was oxidised in the FO CTRL fed fish

(Figure 6.1).

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131

| Pa

ge

Tab

le 6

. 7 In

itial

and

fina

l fat

ty a

cid

com

posi

tion

of w

hole

-bod

y an

d liv

er ti

ssue

from

juve

nile

bar

ram

undi

. All

fatt

y ac

id d

ata

are

pres

ente

d as

pe

rcen

tage

of t

otal

fatt

y ac

ids (

%) u

nles

s oth

erw

ise

stat

ed.

^ Pl

ease

refe

r to

Tabl

e 1

for d

etai

ls. P

SEM

, Poo

led

stan

dard

err

or m

ean

P<0.

001*

** P

<0.0

1**

P<0

.05*

. Sup

ersc

ript l

ette

rs in

dica

te si

gnifi

cant

diff

eren

ces a

mon

g m

eans

. One

-way

AN

OV

A d

f 2,6

, pos

t-hoc

Tuk

ey's

HSD

Pe

rcen

tage

dat

a w

ere

arcs

ine

trans

form

ed p

rior t

o an

alys

is

Any

val

ues <

0.01

are

repo

rted

as 0

.1; N

A, N

ot a

naly

sed.

W

hole

-bod

y

Li

ver

In

itial

FO

C

TRL

FO

LOW

FO

FR

EE

P SE

M

AN

OV

A

Initi

al

FO

CTR

L FO

LO

W

FO

FREE

P

SEM

A

NO

VA

To

tal l

ipid

(wet

w

eigh

t %)

5.1

9.5

9.4

8.7

0.2

F=2.

9, P

=0.1

4 N

A

NA

N

A

NA

N

A

NA

To

tal F

A (m

g/g

Lipi

d) ^

68

1.0

616.

6a 77

7.2b

729.

6ab

25.8

F=

17.4

**

NA

N

A

NA

N

A

NA

N

A

22:6

n-3

2.1

5.5a

2.0b

1.3c

0.7

F=39

.2**

* 4.

4 4.

8a 2.

2b 0.

9c 0.

6 F=

202.

2***

22

:5n-

3 0.

8 1.

6a 0.

7b 0.

1c 0.

2 F=

88.9

***

1.1

1.4a

0.5b

0.3c

0.2

F=16

7.2*

**

20:5

n-3

1.4

3.7a

1.0b

0.6b

0.5

F=70

.4**

* 1.

7 2.

7a 0.

7b 0.

2c 0.

4 F=

440.

8***

20

:4n-

6 0.

4 0.

7a 0.

1b 0.

1b 0.

1 F=

34.5

***

0.7

0.8a

0.5b

0.2c

0.1

F=94

.9**

*

18:3

n-3

1.0

1.0

0.9

0.9

0.1

F=0.

9, P

=0.4

4 0.

6 0.

5 0.

4 0.

5 0.

1 F=

1.25

, P=

0.35

18

:2n-

6 9.

7 8.

8a 11

.2b

11.4

b 0.

4 F=

136.

9***

6.

4 4.

8 6.

0 6.

8 0.

4 F=

3.0,

P=0

.12

18:1

37

.9

30.1

a 41

.4b

43.9

c 2.

1 F=

475.

1***

34

.8

31.1

a 37

.9b

40.7

c 1.

4 F=

116.

1***

18

:0

7.8

7.4a

9.2b

8.9b

0.3

F=94

.3**

* 11

.5

10.6

a 12

.9b

11.8

ab

0.4

F=14

.1**

16

:0

26.1

26

.9

25.8

25

.7

0.2

F=3.

9, P

=0.0

8 27

.8

30.8

31

.3

31.0

0.

4 F=

0.2,

P=0

.85

SFA

38

.5

39.3

a 37

.3b

36.5

b 0.

5 F=

10.8

* 42

.9

45.5

46

.9

45.1

0.

6 F=

0.7,

P=0

.53

MU

FA

45.7

37

.7a

45.0

b 47

.3c

1.5

F=15

3.3*

**

40.0

37

.9a

41.3

b 44

.1c

0.9

F=47

.6**

* PU

FA

11.0

11

.7a

14.0

b 14

.3b

0.4

F=60

.2**

* 8.

5 6.

2 7.

1 8.

4 0.

5 F=

2.6,

0.1

5 LC

-PU

FA

4.7

11.4

a 3.

8b 2.

0b 1.

5 F=

57.2

***

8.6

10.4

a 4.

7b 2.

4c 1.

2 F=

349.

0***

To

tal n

-3

4.3

11.9

a 4.

4b 2.

7b 1.

5 F=

54.0

***

8.6

9.7a

4.1b

2.6c

1.2

F=36

1.0*

**

Tota

l n-6

11

.4

11.2

a 13

.4b

13.5

b 0.

5 F=

92.0

***

8.5

6.8

7.7

8.2

0.4

F=2

.3, P

=0.1

9

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132 | P a g e

Figure 6. 1 (A-D) Mass-balance computations of fatty acid retention and β-oxidation in juvenile barramundi, mean (±SEM) n=3. Saturated fatty acid (a; SFA) retention F=82.5***, β-oxidation F=5.2*; Monounsaturated fatty acid (b; MUFA) retention F=44.5***, β-oxidation F=7.0*; Polyunsaturated fatty acid (c; PUFA) retention F=10.8*, β-oxidation F=1.4, P=0.32; Long-chain polyunsaturated fatty acid (d; LC-PUFA) retention F=6.1*, β-oxidation F=241.5***. Significant differences are indicated by letters (*, P<0.05; **, P<0.01; ***, P<0.001), one - way ANOVA df 2,6., post-hoc Tukey’s HSD.

0%

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

Retention β-oxidation

LC-P

UFA a

b

a

a

b

c

0%

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

Retention β-oxidation

MU

FA

a

b

c

a

b

b

0%

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

Retention β-oxidation

PU

FA

a

a

b

0%

10%

20%

30%

40%

50%

60%

70%

80%

90%

100%

Retention β-oxidation

SFA

bb

a

c

b

a

(A) (B)

(C) (D)

Page 134: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

133 | P a g e

6.3.3 Clinical observations

A range of abnormalities were observed during the experiment. These included red

fins (typically caudal and pectoral), red skin, fin erosion, lesions and non-

contributing (feed refusal) fish. The fish fed the FO FREE diet were significantly

more affected by a range of abnormalities than the fish fed the FO LOW and FO

CTRL diets (Table 6.4). There was no significant difference in the behavioural

response of fish assessed by the methods described earlier (Table 6.4).

6.3.4 Sub-clinical parameters

A range of plasma chemistry parameters were assessed and some significant

differences were observed among the dietary treatments (Table 6.8 and Table 6.9). In

all measured parameters, with the exception of glutamate dehydrogenase (GLDH)

and creatinine, there was a significant time effect. In most parameters the numerical

differences were relatively minor. Phosphate, iron, haemoglobin and haptoglobin all

increased significantly after week six. There was a significant diet effect on plasma

cholesterol with the lowest values recorded in the FO LOW and FREE fed fish.

There was also a significant diet effect in plasma iron being highest in the FO LOW

fed fish. Similarly, plasma haptoglobin was highest in the FO FREE fed fish (Table

6.8).

Expression of lipid metabolism related genes in the liver of the FO CTRL and

FO FREE fish were analysed by real-time quantitative PCR and several significant

differences were observed (Figure 6.2). Repeated measures analysis showed that

there were no significant effects on the expression of Lc CPT1α and Lc ELOVL5

genes. There was a significant diet effect on the expression of Lc ACYL with the

highest expression in the FO FREE fed fish at week four. Similarly, the expression of

Lc FAS was approximately 2.5-fold higher in the FO FREE fish. The expression of

Lc SCD was significantly affected by the dietary treatment with levels of expression

in the FO FREE fish approximately 3- to 4-fold higher than the FO CTRL fish. There

was a significant diet effect in the expression of Lc FADS2 with approximately 2-

fold higher expression among the FO FREE fed fish. There were no significant time

or interaction effects for the genes analysed.

Page 135: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

134

| Pa

ge

Tab

le 6

. 8 P

lasm

a ch

emis

try

para

met

ers i

n ju

veni

le b

arra

mun

di fe

d ex

peri

men

tal d

iets

, sam

pled

fort

nigh

tly fo

r ei

ght w

eeks

.

CK

, Cre

atin

e ki

nase

; ALT

, Ala

nine

tran

sfer

ase;

GLD

H, G

luta

mat

e de

hydr

ogen

ease

P

SEM

, Poo

led

stan

dard

err

or m

ean

Pre-

supe

rscr

ipt l

ette

rs in

dica

te si

gnifi

cant

diff

eren

ces a

mon

g th

e di

ets a

nd p

ost-s

uper

scrip

t let

ters

indi

cate

diff

eren

ces o

ver t

ime.

FO

CTR

L W

K2

FO

CTR

L W

K4

FO

CTR

L W

K6

FO

CTR

L W

K8

FO

LOW

W

K2

FO

LOW

W

K4

FO

LOW

W

K6

FO

LOW

W

K8

FO

FREE

W

K2

FO

FREE

W

K4

FO

FREE

W

K6

FO

FREE

W

K8

P SE

M

CK

(U/L

) 54

94.0

a

1375

.0 b

27

79.0

b

7486

.3 b

48

57.0

a

2099

.3 b

26

44.0

b

6558

.3 b

74

67.3

a

2862

.3 b

40

42.7

b

4406

.7 b

56

3.98

A

LT (U

/L)

15.0

a 3.

3 b

5.7

b 8.

7 b

9.3

a 6.

7 b

5.0 b

10

.7 b

6.

7 a

4.7 b

8.

0 b

8.7 b

0.

74

GLD

H (U

/L)

14.3

8.

3 7.

7 10

.0

20.7

14

.0

12.0

22

.0

15.0

13

.7

10.3

19

.7

1.12

U

rea

(mm

ol/L

) 2.

1 a

2.1

a 2.

7 ab

2.

9 b

2.0

a 2.

1 a

2.1

ab

3.1

b 2.

3 a

2.1

a 2.

8 ab

2.

8 b

0.09

C

reat

inin

e (u

mol

/L)

23.3

24

.3

22.7

22

.7

23.0

23

.0

22.7

24

.3

22.0

21

.7

22.0

23

.0

0.22

C

alci

um (m

mol

/L)

3.0

a 3.

4 b

3.2

ab

3.2

b 2.

9 a

3.1

b 3.

1 ab

3.

3 b

3.0

a 3.

2 b

3.1

ab

3.2

b 0.

03

Mag

nesi

um (m

mol

/L)

1.2

a 1.

2 a

1.1

a 1.

8 b

1.1

a 1.

0 a

1.0

a 2.

0 b

1.1

a 1.

2 a

1.1

a 2.

0 b

0.08

Ph

osph

ate

(mm

ol/L

) 4.

0 a

3.6

a 3.

3 b

3.6

a 3.

5 a

3.5

a 3.

2 b

3.8

a 3.

5 a

3.6

a 3.

3 b

3.5

a 0.

06

Cho

lest

erol

(mm

ol/L

) x 5.

9 a

x 6.

6 b

x 6.

1 ab

x

5.6

a y 4.

4 a

y 4.

6 b

y 4.

6 ab

y 4.

3 a

y 4.

2 a

y 4.

5 b

y 4.

0 ab

y 3.

8 a

0.16

To

tal P

rote

in (g

/L)

46.7

a 52

.5 b

47.6

ab

48.1

ab

42.8

a 45

.7 b

47.1

ab

47.5

ab

45.4

a 48

.9 b

47.9

ab

47.9

ab

0.47

A

lbum

in (g

/L)

13.4

a 15

.8 b

14.1

b 13

.6 ab

12

.7 a

14.0

b 14

.1 b

13.8

ab

13.6

a 14

.3 b

14.3

b 14

.0 ab

0.

16

Iron

(um

ol/L

) x 20

.5 a

x 23

.3 b

x 18

.9 b

x 21

.5 b

y 26

.4 a

y 27

.2 b

y 26

.2 b

y 22

.9 b

x 11

.7 a

x 17

.3 b

x 16

.6 b

x 23

.6 b

1.05

H

aem

oglo

bin

(mg/

dL)

17.3

a 2.

7 b

4.7

ab

26.0

a 8.

7 a

2.7

b 4.

0 ab

17

.3 a

10.7

a 2.

0 b

6.3

ab

8.7

a 1.

47

Hap

togl

obin

(mg/

mL)

x 0.

3 a

x 0.

3 ab

x

0.3

b x

1.3

c x

0.3

a x 0.

3 ab

x 0.

4 b

x 1.

4 c

y 0.

3 a

y 0.

4 ab

y 0.

4 b

y 1.

3 c

0.07

Page 136: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

135

| Pa

ge

Tab

le 6

. 9 S

plit-

plot

ana

lysi

s of v

aria

nce

for

repe

ated

mea

sure

s des

ign

of p

lasm

a ch

emis

try

para

met

ers i

n ju

veni

le b

arra

mun

di.

CK

, Cre

atin

e ki

nase

; ALT

, Ala

nine

tran

sfer

ase;

GLD

H, G

luta

mat

e de

hydr

ogen

ease

Tw

o-w

ay re

peat

ed m

easu

res A

NO

VA

, df o

f res

idua

ls 6

,18.

So

urce

of

varia

tion

Deg

rees

of

fr

eedo

m

F va

lue

P (>

F)

Sour

ce o

f va

riatio

n

Deg

rees

of

fr

eedo

m

F va

lue

P (>

F)

CK

(U/L

) D

iet

2 0.

71

0.85

Phos

phat

e (m

mol

/L)

Die

t 2

0.56

0.

6 W

eek

3 5.

55

<0.0

1

Wee

k 3

3.17

<0

.05

Die

t:Wee

k 6

0.67

0.

67

D

iet:W

eek

6 0.

9 0.

52

ALT

(U/L

) D

iet

2 0.

25

0.79

Cho

lest

erol

(m

mol

/L)

Die

t 2

145.

2 <0

.001

W

eek

3 4.

23

<0.0

5

Wee

k 3

4.85

<0

.05

Die

t:Wee

k 6

1.67

0.

19

D

iet:W

eek

6 0.

77

0.6

GLD

H (U

/L)

Die

t 2

5 0.

05

To

tal P

rote

in

(g/L

) D

iet

2 4.

79

0.06

W

eek

3 3.

06

0.05

Wee

k 3

6.64

<0

.01

Die

t:Wee

k 6

0.43

0.

84

D

iet:W

eek

6 1.

77

0.16

U

rea

(mm

ol/L

) D

iet

2 0.

5 0.

63

A

lbum

in (g

/L)

Die

t 2

1.33

0.

33

Wee

k 3

8.35

<0

.01

W

eek

3 5.

77

<0.0

1 D

iet:W

eek

6 1.

03

0.44

Die

t:Wee

k 6

1.36

0.

28

Cre

atin

ine

(um

ol/L

) D

iet

2 2.

77

0.14

Iron

(um

ol/L

) D

iet

2 14

.6

<0.0

1 W

eek

3 0.

85

0.48

Wee

k 3

5.45

<0

.01

Die

t:Wee

k 6

1.1

0.4

D

iet:W

eek

6 3.

19

<0.0

5 C

alci

um

(mm

ol/L

) D

iet

2 0.

74

0.51

Hae

mog

lobi

n (m

g/dL

) D

iet

2 0.

68

0.54

1 W

eek

3 6.

44

<0.0

1

Wee

k 3

5.48

7 <0

.01

Die

t:Wee

k 6

0.62

0.

72

D

iet:W

eek

6 0.

63

0.7

Mag

nesi

um

(mm

ol/L

) D

iet

2 0.

25

0.78

Hap

togl

obin

(m

g/m

L)

Die

t 2

6.63

<0

.05

Wee

k 3

11.8

1 <0

.001

Wee

k 3

4313

.2

<0.0

01

Die

t:Wee

k 6

0.17

0.

98

D

iet:W

eek

6 2.

41

0.07

Page 137: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

136 | P a g e

Figure 6. 2 (A-F) Expression of lipid metabolism genes in the liver of juvenile barramundi. All data are normalised to EF1α and Luc reference genes, log 2 transformed and expressed relative to the initial fish (WK 0), mean (±SEM) n=6. The FO CTRL (control) groups are indicated by light bars and the FO FREE groups are indicated by dark bars. Two-way repeated measures ANOVA, df of residuals 10,30. Lc ACYL, Diet F=15.5**, Week F=2.3, P=0.09, Diet:Week F=1.0, P=0.39; Lc CPT1a, Diet F=0.2, P=0.69, Week F=0.6, P=0.65, Diet:Week F=06, P=0.62; Lc FAS, Diet F=48.5***, Week F=1.4, P=0.28, Diet:Week F=0.8, P=0.50; Lc SCD, Diet F=126.6***, Week F=0.6, P=0.62, Diet:Week F=0.6, P=0.62; Lc ELOVL5, Diet F=0.2, P=0.66, Week F=0.4, P=0.78, Diet:Week F=0.2, P=0.92; Lc FADS2, Diet F=75.4***, Week F=0.7, P=0.59, Diet:Week F=0.2, P=0.91. Please refer to Table 6.3 for individual gene details.

-3.5

-3

-2.5

-2

-1.5

-1

-0.5

0

Rela

tive

fold

chan

ge (l

og2)

Lc ACYL

-1.2

-1

-0.8

-0.6

-0.4

-0.2

0

Rela

tive

fold

chan

ge (l

og2)

Lc CPT1α

-0.6

-0.4

-0.2

0

0.2

0.4

0.6

0.8

1

1.2

Rela

tive

fold

chan

ge (l

og2)

Lc ELOVL5

WK 8WK 6WK 4WK 2 -3.75

-3.25

-2.75

-2.25

-1.75

-1.25

-0.75

-0.25

0.25Re

lativ

e fo

ld ch

ange

(log

2)

Lc FADS2

WK 8WK 6WK 4WK 2

-2

-1.5

-1

-0.5

0

0.5

1

1.5

2

2.5

Rela

tive

fold

chan

ge (l

og2)

Lc FAS

-1

0

1

2

3

4

5

6

7

Rela

tive

fold

chan

ge (l

og2)

Lc SCD

(A) (B)

(C) (D)

(E) (F)

****** ******

******

**

**

***

***

*** ******

***

Page 138: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

137 | P a g e

6.4 Discussion

The onset of essential fatty acid (EFA) deficiency on growth and feed utilisation in

juvenile barramundi was evident after only two weeks of feeding the experimental

diets. After eight weeks growth was clearly different among all three groups

suggesting that a primary feature of EFA deficiency is growth potential. In addition,

there was a significant difference in the treatment by time interaction term for growth

performance parameters. This interaction shows a clear progression towards the

development of EFA deficiency in the FO LOW and FO FREE fed fish. This is in

agreement with other studies showing reduced growth when carnivorous marine fish

were fed with high levels of FO substitution (Glencross et al., 2003b; Izquierdo et al.,

2005; Montero et al., 2005). In addition, consistent with the feed intake but with

reduced growth, the feed conversion of FO FREE fed fish was significantly poorer.

The ability to define a response to a nutrient relies on being able to define any

symptoms that may occur in its absence. The defatted fish meal used in the present

study contained trace amounts of lipid and LC-PUFA. However, the inclusion of

15% defatted fish meal was based on previous recommendations to achieve what is

considered normal growth for this species (Glencross et al., 2011b; Glencross and

Bermudes, 2012).

Early studies with barramundi demonstrated that decreased dietary lipid is

associated with reduced growth and in some cases EFA deficiency was inferred

(Buranapanidgit and Boonyaratpalin, 1988; Catacutan and Coloso, 1995; Williams et

al., 2003; Williams et al., 2006). In the present study, the macro nutrient levels were

kept constant as barramundi, like most other species, have an interdependent demand

for energy and specific nutrients (Glencross, 2006). The total lipid level was

formulated to be lower than the known optimal requirement (>14%) for fish of this

size (<100 g) so that in this experimental design the lipid would theoretically be

limiting and therefore cause the supply of this nutrient (and vagaries in its

composition) to be the point of sensitivity in the study (Glencross, 2006). Therefore,

the differences in the present study are directly attributable to the fatty acid profile of

the diets, resulting in EFA deficiency.

In the present study, the digestibility of total lipid was lowest in the FO FREE

fed fish consistent with other studies investigating FO replacement (Caballero et al.,

2002; Ng et al., 2004; Torstensen et al., 2000). The apparent digestibility of specific

fatty acids was not greatly modified by the dietary treatments with the exception of

the saturated fatty acids. In the study of Olsen et al. (1998), 18:0 was reported to be

Page 139: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

138 | P a g e

less digestible than other saturates such as 16:0 and 14:0 and in agreement, the

reduction of total lipid digestibility of the present study is likely to be caused by the

18:0 composition of the feeds. Several studies have concluded that changes in lipid

or fatty acid digestibility can result in reduced growth (Hansen et al., 2008;

Karalazos et al., 2011; Menoyo et al., 2007) whereas others have found no such

effect (Caballero et al., 2002; Torstensen et al., 2000). The whole-body and liver

fatty acid profiles in the present study showed some clear differences in terms of

their composition; however, the tissue composition largely resembled that of the fed

diet, also consistent with other studies (Glencross et al., 2014b; Pratoomyot et al.,

2008; Turchini et al., 2011b). A caveat of the present study was that the initial EFA

composition of the fish was reflective of the commercial diet fed prior to

experimentation. There was a slight reduction of total SFA in the whole body and a

lack of any change in the liver, despite the different digestibility values and growth.

Moreover, the LC-PUFA composition of the tissues in the FO FREE fed fish was

almost entirely depleted after eight weeks suggesting that the reduced digestibility of

total SFA had no bearing on the overall composition of the fish.

Examination of the mass-balance relationship of dietary nutrients or indeed

specific fatty acids in the tissues was used to reveal discrete differences in their

utilisation. Improved protein retention and consequently weight gain was evident in

the control group, consistent with previous studies on barramundi (Williams et al.,

2006). The disproportionately low lipid and energy retention of the FO LOW and FO

FREE fed fish is a response to the diets without adequate LC-PUFA. The FO CTRL

fed fish, selectively retained more of the dietary SFA, MUFA and PUFA than the

other fish, however, LC-PUFA were catabolised when in surplus to optimal tissue

concentration, similar to observations from other carnivorous species such as

Atlantic salmon, European sea bass, Murray cod and rainbow trout (Eroldogan et al.,

2013; Stubhaug et al., 2007; Turchini and Francis, 2009; Turchini et al., 2011b).

The aetiology of deficiency was less apparent in the FO LOW fed fish. The

total LC-PUFA concentration in the FO LOW diet with 1% added FO was equivalent

to 4.3 g/kg of the diet compared to 25.6 g/kg in the control diet. Currently available

requirement data for barramundi suggest that an adequate dietary LC-PUFA supply

should be at least 12 g/kg in growing barramundi (Williams et al., 2006). In

agreement, Glencross and Rutherford (2011) reasoned that provided EFA are kept in

balance the total LC-PUFA requirement could be further revised. Despite the very

low inclusion of LC-PUFA (FO LOW and FO FREE diets) there were no apparent

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139 | P a g e

effects of the diets on survival or behavioural changes. However, a range of physical

abnormalities were observed in the FO FREE fed fish including; erosion of the fins,

reddening of the fins and extremities, gross lesions and physical deformities,

symptoms which are associated with EFA deficiency in fish (Castell et al., 1972).

This observation suggests that even at very low inclusion levels of FO there was a

marked improvement in the physical health of fish despite the reduced growth.

Moreover, the whole-body composition data suggest that the FO LOW fed fish

maintained a proportion of LC-PUFA similar to that of the initial fish fed a

commercially available diet. Therefore in support of the previous studies on this

species, we too support that LC-PUFA supply should be at least 12 g/kg in growing

barramundi.

A range of plasma biochemical markers were used in the assessment of EFA

deficiency over the eight week time course. The results suggest that only minor

changes occurred and mostly on a temporal basis. There were no significant diet or

interaction effects observed for the enzyme markers creatine kinase (CK), alanine

transferase (ALT) or glutamate dehydrogenase (GLDH). Elevated ALT and GLDH

activity is considered a reliable marker of liver cell necrosis that can be characterised

by the depletion of hepatic LC-PUFA stores (Morton et al., 2014; Van Waes and

Lieber, 1977; Videla et al., 2004). However, in support of previous work with the

same species, CK, ALT and GLDH levels in the present study were not affected by

the lipid composition of the diets (Glencross and Rutherford, 2011). In the

identification of underlying organ failure or disease there can be a concomitant

change in concentration of circulating urea, calcium, magnesium, phosphate and

albumin (Hjelte et al., 1990). However, in the present study these markers only

differed significantly on a temporal basis, generally increasing after week two. It

could be argued that the general increase in the markers is due to an adaptation to the

experimental diets rather than a treatment effect.

In the present study, there was a marked decrease in plasma cholesterol levels

in the FO LOW and FREE fed fish after only two weeks of feeding the experimental

diets. Increasing DHA alone in barramundi did not result in any change in plasma

cholesterol (Morton et al., 2014). While the replacement of FO with vegetable oil in

Atlantic salmon diets led to hypocholesterolemia (Glencross et al., 2014b; Richard et

al., 2006). In light of these findings, it is likely that cholesterol derived from FO is

beneficial in fish, including the barramundi, as it can potentially modulate energy

expenditure and FA metabolic pathways (Norambuena et al., 2013a).

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140 | P a g e

Consistent with other studies, nutritionally regulated gene expression in the

FO CTRL fed fish appear to follow a normal progression of desaturation and

elongation of FA to their longer chain and less-saturated derivatives (Mohd-Yusof et

al., 2010; Tu et al., 2013; Wade et al., 2014). Transcription of ATP citrate lyase (Lc

ACYL) produces acetyl-CoA which is a substrate for many biosynthetic pathways

including lipogenesis and in the present study Lc ACYL was up-regulated in the EFA

deficient fish (Dias et al., 1998). There was no significant effect in the expression of

elongation (Lc ELOVL5) or carnitine palmitoyltransferase (Lc CPT1α); however,

there was a tendency towards higher expression in the FO FREE fed fish. CPT1α is

considered a key enzyme in the regulation of mitochondrial oxidation and in the

present study CPT1α was down regulated in both treatments compared to the initial

fish (Torstensen et al., 2000). This effect is likely to be caused by the low lipid levels

of all three diets, a strategy that was intended to highlight the potential effects of

EFA deficiency. This study also found that desaturase enzymes (Lc SCD and Lc

FADS2) in barramundi were significantly up-regulated in fish fed the FO FREE diet.

This is in agreement with other studies, on a range of species, showing an up-

regulation of desaturase enzymes (including both SCD and FADS2) in response to

reduced FO (Alhazzaa et al., 2011b; Betancor et al., 2014; González-Rovira et al.,

2009; Tocher et al., 2006a). Fatty acid synthase (Lc FAS) expression in the present

study was also significantly up-regulated in fish fed the FO FREE diet. Although the

FAS enzyme system has rarely been investigated in fish in response to FO

replacement, it is an important step in the initial synthesis of palmitate from acetyl-

CoA.

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141 | P a g e

7.0 Eicosapentaenoic acid, arachidonic acid and eicosanoid

metabolism in juvenile barramundi Lates calcarifer

Adapted from

Salini, M.J., Wade, N.M., Araújo, B.C., Turchini, G.M., Glencross, B.D., 2016.

Eicosapentaenoic acid, arachidonic acid and eicosanoid metabolism in juvenile

barramundi Lates calcarifer. Lipids. 51(8), 973-988

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142 | P a g e

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143 | P a g e

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144 | P a g e

7.1 Aims

The present study hypothesised that increasing the dietary inclusion level of EPA or

ARA independently may lead to improvements in growth performance, feed

conversion and also the utilisation efficiency of supplied EPA and ARA. Therefore, a

two part, dose-response experimental design was used to determine the effect of

increasing the dietary EPA or ARA. To achieve this, commercial preparations of an

EPA rich fish oil and an ARA rich fungal oil were incrementally added to a series of

barramundi diets. It was also hypothesised that high levels of ARA may alter the

transcription of nutritionally inducible genes involved in eicosanoid synthesis. The

genes regulating eicosanoid synthesis have not been identified in barramundi, and no

information is available on their nutritional regulation.

7.2 Materials and methods

The methodology used in the present experiment are detailed in the section 2.0

General methodology. Ethical clearance was approved for the experimental

procedures by the CSIRO Animal Ethics Committee (Application A05/2014). The

chemical composition of the main dietary ingredients is presented in Table 7.1. The

formulation and chemical composition of the ten diets are presented in Table 7.2.

The pairs of degenerate primers that were subsequently synthesised by Sigma-

Aldrich are presented in Table 7.3. The real-time PCR primers specific to each target

gene are presented in Table 7.4.

Page 146: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

145

| Pa

ge

Tab

le 7

. 1 C

ompo

sitio

n of

key

ingr

edie

nts u

sed

in d

iet f

orm

ulat

ions

(g/k

g D

M).

Fatt

y ac

ids a

re p

rese

nted

as m

ole

perc

enta

ge (m

ole%

).

Fi

sh m

eala

Poul

try m

eal

Fish

oil

Palm

flak

e O

live

oil

AR

ASC

Incr

omeg

a EP

A T

G50

0 In

crom

ega

DH

A T

G50

0

Dry

mat

ter (

g/kg

) 97

4 96

6 98

5 99

7 99

2 99

1 99

0 99

2 Li

pid

44

157

946

958

911

972

971

975

Ash

19

1 15

1 N

D

ND

N

D

ND

N

D

ND

Pr

otei

n 68

4 66

0 7

7 5

10

6 5

Ener

gy (M

J/kg

) 18

.6

20.9

35

.6

39.5

39

.7

40.1

39

.1

40.1

16

:0

27.3

25

.8

25.1

49

.9

11.3

11

.0

ND

2.

2 18

:0

4.8

8.4

5.2

48.7

3.

9 8.

9 N

D

4.8

18:1

17

.7

40.9

19

.7

ND

71

.6

24.6

1.

3 10

.1

18:2

n-6

1.7

10.5

2.

6 N

D

10.8

7.

8 N

D

1.0

18:3

n-3

0.4

1.4

1.2

ND

1.

0 N

D

ND

N

D

20:4

n-6

0.8

1.1

1.5

ND

N

D

42.3

3.

6 2.

9 20

:5n-

3 14

.7

0.6

10.9

N

D

ND

N

D

74.3

9.

9 22

:5n-

3 2.

8 0.

3 1.

8 N

D

ND

0.

8 2.

2 2.

8 22

:6n-

3 10

.3

0.7

13.5

N

D

ND

N

D

17.0

63

.9

SFA

40

.4

35.9

38

.7

100

15.7

20

.6

ND

6.

9 M

UFA

29

.0

48.8

29

.6

ND

72

.5

24.6

2.

8 12

.6

C18

PUFA

2.

1 12

.0

3.8

ND

11

.8

7.8

ND

1.

0 LC

-PU

FA

28.5

3.

3 27

.8

ND

N

D

47.0

97

.2

79.5

EP

A/A

RA

18

.9

0.5

7.1

ND

N

D

<0.1

20

.4

3.4

* Fi

sh m

eal w

as d

efat

ted

prio

r to

use.

See

met

hods

for d

etai

ls. N

D, n

ot d

etec

ted;

GE,

gro

ss e

nerg

y.

18:1

, sum

of 1

8:1n

-7, 1

8:1n

-9 c

is, 1

8:1n

-9 tr

ans;

satu

rate

d fa

tty a

cids

(SFA

), su

m o

f 12:

0, 1

4:0,

16:

0, 1

8:0,

20:

, 22:

0, 2

4:0;

mon

ouns

atur

ated

fatty

aci

ds (M

UFA

), su

m o

f 14:

1n-5

, 16:

1n-7

, 18:

1n-7

, 18:

1n-9

(cis

and

tran

s), 2

0:1n

-7, 2

0:1n

-9, 2

2:1n

-9, 2

4:1n

-9; p

olyu

nsat

urat

ed fa

tty a

cids

, with

18

carb

on a

tom

s (C

18 P

UFA

), su

m

18:2

n-6

(cis

and

tran

s), 1

8:3n

-6, 1

8:3n

-3, 1

8:4n

-3; l

ong

chai

n po

lyun

satu

rate

d fa

tty a

cids

, with

20

or m

ore

carb

on a

tom

s (LC

-PU

FA),

sum

20:

2n-6

, 20:

3n-6

, 20:

4n-6

, 22

:4n-

6, 2

0:3n

-3, 2

0:5n

-3, 2

2:5n

-3, 2

2:6n

-3; n

-3, s

um o

f om

ega

3 C

18 P

UFA

and

LC

-PU

FA; n

-6, s

um o

f om

ega

6 C

18 P

UFA

and

LC

-PU

FA.

Page 147: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

146

| Pa

ge

Tab

le 7

. 2 F

orm

ulat

ion

and

com

posi

tion

of e

xper

imen

tal d

iets

(g/k

g D

M).

Fatt

y ac

ids a

re p

rese

nted

as m

ole

perc

enta

ges (

mol

e%).

EP

A 1

EP

A 5

EP

A 1

0 EP

A 1

5 EP

A 2

0 A

RA

1

AR

A 6

A

RA

12

AR

A 1

8 C

TRL

FO

Fish

mea

l a 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 Po

ultry

mea

l a 97

97

97

97

97

97

97

97

97

97

C

asei

n b

150

150

150

150

150

150

150

150

150

150

Soy

prot

ein

isol

ate

c 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 W

heat

glu

ten

c 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 W

heat

flou

r c 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 15

0 Pr

egel

whe

at st

arch

c 50

50

50

50

50

50

50

50

50

50

M

ethi

onin

e b

5 5

5 5

5 5

5 5

5 5

Prem

ix d

6 6

6 6

6 6

6 6

6 6

Dic

alci

um p

hosp

hate

5

5 5

5 5

5 5

5 5

5 C

holin

e ch

lorid

e 2

2 2

2 2

2 2

2 2

2 St

ay-C

2

2 2

2 2

2 2

2 2

2 Y

ttriu

m e

1 1

1 1

1 1

1 1

1 1

Fish

oil

a 0.

0 0.

0 0.

0 0.

0 0.

0 0.

0 0.

0 0.

0 0.

0 82

.0

Palm

Fla

ke f

31.0

28

.5

25.4

22

.0

19.0

28

.5

23.5

17

.2

11.0

0.

0 O

live

oil f

38.7

36

.0

31.9

28

.0

24.0

36

.0

30.0

21

.9

13.7

0.

0 A

RA

SCO

® g

2.3

1.8

1.2

0.5

0.0

1.8

13.0

27

.6

42.2

0.

0 In

crom

ega™

EPA

TG

500

h 0.

0 7.

7 18

.2

29.0

39

.0

7.7

7.5

7.1

6.9

0.0

Incr

omeg

a™ D

HA

TG

500

h 10

.0

8.0

5.3

2.5

0.0

8.0

8.0

8.2

8.2

0.0

Com

posi

tion

Dry

mat

ter (

g/kg

) 96

1 95

9 95

5 94

6 95

0 95

9 95

2 96

1 96

3 95

9 Li

pid

100

96

106

96

94

96

92

97

96

90

Ash

67

67

66

67

63

67

10

7 68

68

69

Pr

otei

n 58

6 56

6 58

4 56

3 55

9 56

6 56

8 57

7 59

6 57

7

Page 148: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

147

| Pa

ge

GE

(MJ/

kg)

21.6

21

.7

21.5

21

.4

21.3

21

.7

21.6

21

.7

21.7

21

.8

Fatty

aci

ds (m

g/g

lipid

) ^ 83

2.7

876.

3 82

8.2

824.

0 85

4.4

876.

3 82

3.8

848.

9 86

6.9

866.

3 16

:0

28.0

28

.0

21.1

20

.8

19.8

28

.0

22.2

19

.7

17.8

25

.0

18:0

17

.4

16.8

16

.4

15.3

13

.0

16.8

14

.7

13.6

11

.5

5.6

18:1

33

.1

31.3

29

.8

29.6

27

.2

31.1

31

.1

29.3

26

.8

21.6

18

:2n-

6 10

.2

10.4

11

.9

7.9

9.7

10.4

11

.7

10.1

10

.9

10.1

18

:3n-

3 0.

8 0.

8 1.

2 0.

8 1.

0 0.

8 1.

0 0.

8 0.

8 1.

5 20

:4n-

6 1.

2 1.

1 1.

2 1.

2 1.

2 1.

0 4.

9 10

.7

15.5

1.

4 20

:5n-

3 1.

1 4.

1 9.

0 16

.1

19.0

4.

1 5.

3 4.

9 5.

3 8.

4 22

:5n-

3 0.

4 0.

4 0.

8 0.

7 0.

8 0.

4 0.

5 0.

7 0.

8 1.

5 22

:6n-

3 4.

0 4.

5 4.

9 5.

5 5.

1 4.

5 4.

6 5.

6 4.

9 10

.0

SFA

46

.7

46.1

38

.9

37.0

34

.0

46.1

38

.3

34.6

30

.6

37.1

M

UFA

34

.6

32.5

31

.8

30.9

29

.0

32.5

32

.8

30.9

28

.5

29.9

C

18PU

FA

11.5

11

.2

13.4

8.

7 10

.8

11.2

13

.1

11.7

12

.9

11.6

LC

-PU

FA

7.2

10.1

15

.9

23.5

26

.3

10.1

15

.8

22.8

28

.0

21.4

EP

A/A

RA

0.

9 3.

8 7.

6 13

.0

15.5

3.

8 1.

1 0.

5 0.

3 6.

1 ^

Ref

er to

Tab

le 7

.1 fo

r def

initi

ons o

f fat

ty a

cids

. Qua

ntita

tive

data

can

be

obta

ined

by

mul

tiply

ing

the

tota

l fat

ty a

cids

(mg/

g lip

id) b

y th

e in

divi

dual

fa

tty a

cid

of in

tere

st.

a R

idle

y A

quaf

eed,

Nar

angb

a, Q

LD, A

ustra

lia.

b B

ulk

Pow

ders

, ww

w.b

ulkp

owde

rs.c

om.a

u c

Man

ildra

Gro

up, R

ockl

ea, Q

LD, A

ustra

lia

d V

itam

in a

nd m

iner

al p

rem

ix (I

U k

g-1

or g

/kg

of p

rem

ix):

vita

min

A, 2

.5M

IU; v

itam

in D

3, 0

.25

MIU

; vita

min

E, 1

6.7

g; v

itam

in K

3, 1

.7 g

; vita

min

B

1, 2

.5 g

; vita

min

B2,

4.2

g; v

itam

in B

3, 2

5 g;

vita

min

B5,

8.3

; vita

min

B6,

2.0

g; v

itam

in B

9, 0

.8; v

itam

in B

12, 0

.005

g; b

iotin

, 0.1

7 g;

vita

min

C, 7

5 g;

cho

line,

166

.7 g

; ino

sito

l, 58

.3 g

; eth

oxyq

uin,

20.

8 g;

cop

per,

2.5

g; fe

rrou

s iro

n, 1

0.0

g; m

agne

sium

, 16.

6 g;

man

gane

se, 1

5.0

g; z

inc,

25.

0 g

e Y

ttriu

m o

xide

, Sta

nfor

d m

ater

ials

, Alis

o V

iejo

, CA

, USA

. f S

ydne

y Es

sent

ial O

il C

o., S

ydne

y, N

SW, A

ustra

lia

g A

RA

SCO

®, M

arte

k B

iosc

ienc

es C

o., C

olum

bia,

MD

, USA

. h

CR

OD

A™

, Sna

ith, E

ast Y

orks

hire

, UK

.

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148

| Pa

ge

Tab

le 7

. 3 F

orw

ard

and

reve

rse

prim

er p

airs

(5ʹ –

3ʹ)

used

in th

e cl

onin

g of

eic

osan

oid

met

abol

ism

gen

es in

bar

ram

undi

and

rea

l-tim

e qP

CR

ge

ne e

xpre

ssio

n an

alys

is.

Targ

et

A

cces

sion

Se

quen

ce (F

/R)

Prod

uct s

ize

Deg

ener

ate

prim

ers

Pr

osta

glan

din

G/H

synt

hase

KU

1882

76

TTTG

GG

AA

TGTA

CG

CTA

CG

C

752

bp

TTTG

GG

AA

TGTA

CG

CTA

CG

C

Pros

tagl

andi

n G

/H sy

ntha

se

K

U18

8277

TC

AG

TGTG

CG

TTTC

CA

GTA

CA

G

999

bp

GG

ATT

CTT

TCTC

CA

GA

CA

GC

Pr

osta

glan

din

G/H

synt

hase

KU

1882

78

GTG

ATG

TGC

TGA

AG

GA

GG

TG

997

bp

AG

GA

TTG

CG

GA

CA

TTTC

TTTC

TC

Ara

chid

onat

e 5-

lipox

ygen

ase

K

U18

8279

TT

TAC

CA

TCG

CC

ATC

AA

CA

C

976

bp

GA

GA

TGA

CG

GC

TAC

AG

GG

TG

A

bbre

viat

ion

EC n

umbe

r Se

quen

ce (F

/R)

Am

plic

on si

ze

RT- q

PCR

prim

ers

Pr

osta

glan

din

G/H

synt

hase

Lc

CO

X1a

1.14

.99.

1 A

AC

CG

AG

TCTG

TGA

CA

TCC

T 24

7 bp

C

AA

CG

TGG

GA

TCA

AA

CTT

CA

G

Pros

tagl

andi

n G

/H sy

ntha

se

Lc C

OX1

b 1.

14.9

9.1

CA

GC

CC

TTC

AA

TCA

GTA

CA

G

238

bp

TCTC

AC

CG

AA

TATG

CTA

CC

A

Pros

tagl

andi

n G

/H sy

ntha

se

Lc C

OX2

1.

14.9

9.1

AG

TTTG

TCTT

CA

AC

AC

CTC

TG

264

bp

ATT

TCTC

TGC

TGTT

CTC

AA

TGG

A

rach

idon

ate

5-lip

oxyg

enas

e Lc

ALO

X-5

1.13

.11.

34

TTTA

CC

ATC

GC

CA

TCA

AC

AC

C

228

bp

CTC

TTC

CTT

GC

TGTC

CA

CA

C

Car

nitin

e pa

lmito

ylra

nsfe

rase

Lc

CPT

1a

2.3.

1.21

TG

ATG

GTT

ATG

GG

GTG

TCC

T 19

6 bp

C

GG

CTC

TCTT

CA

AC

TTTG

CT

Page 150: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

149

| Pa

ge

Lu

cife

rase

Lu

c N

A

GG

TGTT

GG

GC

GC

GTT

ATT

TA

101

bp

GG

TGTT

GG

GC

GC

GTT

ATT

TA

Elon

gatio

n fa

ctor

1 a

lpha

EF

NA

A

AA

TTG

GC

GG

TATT

GG

AA

C

83 b

p

G

GG

AG

CA

AA

GG

TGA

CG

AC

NA

, Not

ava

ilabl

e

Page 151: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

150 | P a g e

7.3 Results

7.3.1 Growth performance and feed utilisation

The results of the 42 d growth assay demonstrated that the barramundi responded

well to the experimental diets in both experiments exceeding over 400% of their

original weight at a rate of more than 1 g/d. The growth parameters for each

experiment were analysed separately using polynomial contrasts (Table 7.4 and 7.5).

When the fish were fed increasing EPA there were no significant contrasts in any of

the growth parameters (Table 7.4). Similarly, the barramundi did not show any

significant contrasts in response to the increasing ARA in the second experiment

(Table 7.5). The only exception being a slight improvement in feed conversion with

the addition of ARA, however, the numerical differences were minor. Survival was

similar among all of the treatments. Several moribund fish were removed from the

system after a weight check at day 28. These fish were considered non-contributing

as they had not consumed any feed. Additionally, the growth performance of the fish

fed different EPA and ARA treatments were compared by one-way ANOVA against

the control. There were no significant differences in any of the growth parameters

measured (data not reported).

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151

| Pa

ge

Tab

le 7

. 4 G

row

th p

erfo

rman

ce a

nd fe

ed u

tilis

atio

n of

bar

ram

undi

fed

incr

easi

ng E

PA a

naly

sed

usin

g po

lyno

mia

l con

tras

ts.

^ D

egre

es o

f fre

edom

4, 1

0; li

near

, qua

drat

ic a

nd c

ubic

val

ues a

re P

val

ues a

t an

alph

a le

vel o

f 0.0

5.

BW

, Bod

y w

eigh

t, P

SEM

, Poo

led

stan

dard

err

or m

ean.

D

iets

Poly

nom

ial c

ontra

sts ^

EP

A

1 EP

A

5 EP

A

10

EPA

15

EP

A

20

P SE

M

Line

ar

Qua

drat

ic

Cub

ic

Initi

al w

eigh

t (g)

10

.0

10.4

10

.3

10.3

10

.3

0.00

0.

815

0.55

6 0.

553

Fina

l wei

ght (

g)

55.6

53

.8

54.2

53

.6

53.6

0.

40

0.12

6 0.

437

0.55

0 W

eigh

t gai

ned

(g)

45.3

43

.5

43.9

43

.3

43.3

0.

40

0.12

6 0.

413

0.52

6 B

W g

ain

(%)

439.

5 41

9.7

426.

0 41

9.5

420.

3 3.

80

0.13

2 0.

329

0.44

4 D

aily

gai

n ra

te (g

/d)

1.08

1.

03

1.05

1.

03

1.03

0.

01

0.11

8 0.

417

0.49

6 Fe

ed c

onve

rsio

n 0.

70

0.73

0.

72

0.74

0.

73

0.01

0.

132

0.65

4 0.

820

Surv

ival

(%)

91.1

93

.3

93.3

92

.2

93.3

0.

40

0.64

9 0.

754

0.63

9

Page 153: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

152

| Pa

ge

Tab

le 7

. 5 G

row

th p

erfo

rman

ce a

nd fe

ed u

tilis

atio

n of

bar

ram

undi

fed

incr

easi

ng A

RA

ana

lyse

d us

ing

poly

nom

ial c

ontr

asts

.

D

iets

Po

lyno

mia

l con

trast

s ^

A

RA

1

AR

A

6 A

RA

12

A

RA

18

P

SEM

Li

near

Q

uadr

atic

C

ubic

Initi

al w

eigh

t (g)

10

.4

10.2

10

.4

10.4

0.

02

0.46

6 0.

230

0.06

2 Fi

nal w

eigh

t (g)

53

.8

53.7

53

.2

54.8

0.

51

0.43

5 0.

209

0.35

7 W

eigh

t gai

ned

(g)

43.5

43

.5

42.8

44

.4

0.52

0.

466

0.23

9 0.

299

BW

gai

n (%

) 41

9.7

424.

9 41

2.6

428.

7 4.

96

0.62

5 0.

427

0.15

3 D

aily

gai

n ra

te (g

/d)

1.03

1.

04

1.02

1.

06

0.01

0.

466

0.23

9 0.

299

Feed

con

vers

ion

0.73

0.

73

0.72

0.

70

0.01

0.

014

0.05

3 0.

698

Surv

ival

(%)

93.3

93

.3

97.8

98

.9

1.65

0.

017

0.73

0 0.

301

^ M

ultip

le R

2 0.

30, d

f 3,8

; lin

ear,

quad

ratic

and

cub

ic v

alue

s are

P v

alue

s at a

n al

pha

leve

l of 0

.05.

B

W, B

ody

wei

ght;

P SE

M, P

oole

d st

anda

rd e

rror

mea

n.

Page 154: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

153 | P a g e

7.3.2 Digestibility analysis of the diets

While no differences were recorded in the digestibility of dry matter, protein or

energy across the treatments, the digestibility of lipid was significantly higher in the

control (FO CTRL) fed fish compared to the EPA 1, EPA 10 and ARA 1 fed fish

(Table 7.6). There was significantly higher digestibility of 18:0 in the EPA 1 fish

compared to the EPA 10, EPA 20 and ARA 18 fish. The digestibility of 18:1 was

significantly higher in the EPA 10, EPA 20 and ARA 18 fish compared to the FO

CTRL fish. Similarly there was a significantly higher digestibility of 18:2n-6 in the

EPA 20 fish compared to the FO CTRL fish. EPA digestibility was significantly

higher in the EPA 20 fish compared to the ARA 1 and FO CTRL fish. The combined

SFA digestibility was significantly highest in the EPA 1 fish compared to the EPA

20 and ARA 18 fish. There was a significantly higher digestibility of MUFA in the

ARA 20 fish compared to the FO CTRL fish. C18PUFA digestibility was

significantly highest in the EPA 1 and EPA 20 compared to the FO CTRL fish. The

digestibility of LC-PUFA was significantly highest in the EPA 1, EPA 10 and EPA

20 fish compared to the ARA 1 fish.

7.3.3 Whole-body composition.

When compared against the control (FO CTRL), there were significant differences in

whole body composition for many parameters (Table 7.7). Whole body dry matter

was significantly higher in the EPA 20 and FO CTRL fish compared to the EPA 1

fish. The lipid composition was significantly higher in the FO CTRL fish compared

to all the other fish groups with the only exception being the ARA 18 fish. While the

energy composition was lowest in the EPA 1 fish compared to all the other fish

groups with the only exception being the ARA 1 fish. There was a significantly

higher 16:0 composition in the FO CTRL fish compared to the EPA 10 and EPA 20

while the ARA 18 fish had the lowest 16:0 composition. The 18:0 composition was

significantly higher in the EPA 1, EPA 10 and ARA 18 fish compared to the EPA 20

fish. The 18:1 composition was significantly highest in the EPA 1 and ARA 1 fish

followed by the EPA 10 fish then followed by the EPA 20 and ARA 18 fish, with the

lowest value recorded in the FO CTRL fish. As expected, there was a significant

elevation of ARA (20:4n-6) in the ARA 18 fed fish. Similarly, the EPA (20:5n-3)

composition was significantly increased with increasing dietary EPA while the FO

CTRL fish had a significantly higher composition of EPA than the ARA 1 and ARA

18 fish. The DHA (22:6n-3) body composition was significantly highest in the FO

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154 | P a g e

CTRL fed fish. There was also a significant increase in the EPA/ARA ratio in the

EPA fed fish with the EPA 10 equivalent to the FO CTRL fish, while there was a

significant decrease in the EPA/ARA ratio from the ARA 1 and ARA 18 fish.

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155

| Pa

ge

Tab

le 7

. 6 A

ppar

ent d

iges

tibili

ty (%

) of n

utri

ents

and

fatt

y ac

ids i

n di

ets a

naly

sed

by o

ne-w

ay A

NO

VA

.

EP

A

1 EP

A

10

EPA

20

A

RA

1

AR

A

18

FO

CTR

L P

SEM

F

valu

e P

Val

ue ^

Dry

mat

ter

70.2

69

.1

74.0

70

.8

67.3

69

.2

1.1

0.46

0.

800

Prot

ein

92.3

91

.7

93.1

92

.0

91.1

92

.4

0.3

1.05

0.

435

Lipi

d 79

.3 a

85.2

a

89.3

ab

78.3

a

86.4

ab

94.9

b

1.6

11.1

2 0.

001

Ener

gy

82.3

79

.2

84.7

80

.0

81.1

83

.3

0.8

1.27

0.

340

16:0

70

.1

52.7

51

.4

63.6

51

.8

63.8

2.

7 1.

64

0.22

3 18

:0

64.9

a

42.1

cd

28.2

d

53.8

abc

30

.7 d

56

.8 a

bc

3.5

16.5

6 0.

000

18:1

92

.1 a

b 93

.1 a

94.7

a

89.3

ab

93.3

a

84.1

b

1.0

4.87

0.

014

18:2

n-6

95.9

ab

94.9

ab

97.0

a

94.4

ab

95.3

ab

92.5

b

0.4

4.31

0.

017

18:3

n-3

100.

0 10

0.0

100.

0 10

0.0

100.

0 10

0.0

0.0

NA

N

A

20:4

n-6

100.

0 10

0.0

99.0

10

0.0

96.9

10

0.0

0.3

NA

N

A

20:5

n-3

100.

0 97

.8 a

b 99

.2 b

96

.1 a

97.6

ab

96.7

a

0.4

8.70

0.

002

22:5

n-3

100.

0 10

0.0

100.

0 10

0.0

95.3

90

.4

1.1

NA

N

A

22:6

n-3

95.6

96

97

.9

92.9

95

.8

95.7

0.

5 2.

74

0.07

1 SF

A

71.3

a

54.5

ab

49.6

b

63.9

ab

50.7

b

66.9

ab

2.4

4.89

0.

011

MU

FA

92.4

a

93.6

a

96.0

a

89.8

ab

93.3

a

83.7

b

1.1

8.10

0.

002

C18

PUFA

96

.3 a

95.4

ab

97.3

a

94.9

ab

96.0

ab

93.5

b

0.4

5.07

0.

010

LC-P

UFA

98

.2 a

98.2

a

98.9

a

94.5

c

96.9

ab

95.9

bc

0.4

10.1

6 0.

000

^ D

egre

es o

f fre

edom

5, 1

2. S

uper

scrip

t let

ters

indi

cate

sign

ifica

nt d

iffer

ence

s am

ong

mea

ns.

P SE

M, P

oole

d st

anda

rd e

rror

mea

n.

Page 157: Fatty acid metabolism in barramundi (Lates calcariferdro.deakin.edu.au/eserv/DU:30088971/salini-fattyacid-2016A.pdf · Fatty acid metabolism in barramundi (Lates calcarifer) By Mr

156

| Pa

ge

Tab

le 7

. 7 W

hole

bod

y an

d fa

tty

acid

com

posi

tion

of b

arra

mun

di a

naly

sed

by o

ne-w

ay A

NO

VA

(g/k

g liv

e-ba

sis)

. Fat

ty a

cids

are

pre

sent

ed a

s m

ole

perc

enta

ges (

mol

e%).

In

itial

fis

h EP

A

1 EP

A

10

EPA

20

A

RA

1

AR

A

18

FO

CTR

L P

SEM

F

stat

istic

P

valu

e ^

Dry

mat

ter

225.

4 26

6.2a

280.

6 ab

284.

6 b

275.

3 ab

280.

4 ab

287.

5 b

2.0

4.95

0.

011

Prot

ein

144.

4 17

3.0

182.

3 18

1.1

182.

2 17

8.0

177.

4 1.

5 0.

95

0.48

2 Li

pid

32.9

55

.0 a

63.9

b

66.0

b

61.2

ab

67.5

bc

73.5

c

1.5

12.7

0.

000

Ener

gy (M

J/kg

) 47

.2

59.9

a

67.0

b

66.4

b

65.2

ab

66.6

b

67.3

b

0.8

4.50

0.

015

16:0

26

.0

26.5

ab

24.7

bc

23.6

bc

25.8

ab

22.8

c

28.7

a

0.9

30.6

0.

000

18:0

7.

5 7.

4 a

7.5 a

6.

5 b

7.1 a

b 7.

5 a

6.7 a

b 0.

2 13

.6

0.00

1 18

:1

32.9

38

.4 a

36.0

b

32.5

c

37.7

a

30.8

c

27.4

d

1.8

3.32

0.

041

18:2

n-6

10.3

12

.2 a

11.2

a

11.1

a

11.9

a

11.3

a

9.4 b

0.

4 22

.8

0.00

0 18

:3n-

3 1.

2 1.

0 1.

0 1.

0 1.

0 0.

8 1.

1 0.

0 1.

0 0.

458

20:4

n-6

0.8

1.0 a

1.

1 a

0.9 a

1.

0 a

10.4

b

0.9 a

1.

6 >9

99.9

0.

000

20:5

n-3

2.6

1.2 a

5.

5 d

11.4

e

2.9 b

3.

0 b

4.2 c

1.

5 25

0.0

0.00

0 22

:5n-

3 1.

2 0.

8 a

1.8 c

2.

4 c

1.4 b

1.

3 b

2.0 c

0.

2 32

.2

0.00

0 22

:6n-

3 5.

1 4.

1 a

4.3 a

4.

4 a

4.2 a

4.

3 a

6.8 b

0.

4 12

1.0

0.00

0 SF

A

37.8

36

.0 b

34.1

cd

32.1

d

34.9

bc

32.0

d

40.1

a

1.3

64.5

0.

000

MU

FA

40.5

42

.5 a

40.0

b

36.1

c

41.8

a

34.3

c

34.7

c

1.5

119.

2 0.

000

C18

PUFA

12

.0

14.1

a

12.9

bc

12.7

bc

13.7

ab

13.4

ab

11.1

c

0.4

22.9

0.

000

LC-P

UFA

9.

6 7.

4 a

13.0

cd

19.1

e

9.7 b

20

.2 e

13.9

d

2.1

146.

9 0.

000

EPA

/AR

A

3.4

1.2 b

5.

2 d

12.2

e

2.9 c

0.

3 a

4.5 d

1.

7 62

4.0

0.00

0 ^

Deg

rees

of f

reed

om 5

, 12.

Sup

ersc

ript l

ette

rs in

dica

te si

gnifi

cant

diff

eren

ces a

mon

g m

eans

. P

SEM

, Poo

led

stan

dard

err

or m

ean.

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157 | P a g e

7.3.4 Fatty acid retention efficiency

The retention efficiency of each fatty acid in the control fed fish (FO CTRL) did not

differ from the fish fed either increasing EPA or ARA (Fig. 7.1a-j). There was a

concave quadratic effect of increasing EPA, rising to a plateau at 94.9% retention of

20:4n-6 (Fig. 7.1c; Table 7.8). There was a convex quadratic effect of increasing

ARA, falling to a nadir at 68.8% on the retention efficiency of 20:4n-6 (Fig. 7.1h;

Table 7.8). There was a significant quadratic effect on 20:5n-3 retention in response

to increasing dietary EPA diets with values ranging between 55.6 to 71.2%; whereas

increasing ARA had no effect on 20:5n-3 retention (Fig.7.1d, i; Table 7.8). Retention

efficiency of 22:6n-3 was not affected by increasing dietary EPA with values ranging

between 78.3 to 88.4%; however, there was a significant quadratic effect in response

to increasing dietary ARA with values ranging between 83.8 to 109.3% (Fig. 7.1e, j;

Table 7.8).

7.3.5 Marginal utilisation efficiencies

The marginal utilisation efficiencies are presented for both EPA and ARA fed fish

(Fig. 7.2a, 7.2b respectively). Based on the linear assessment of marginal EPA intake

against marginal EPA gained, a significant difference was observed (P<0.01). The

positive y intercept value indicates that no maintenance demand could be established

for 20:5n-3. Using the live-weight exponent value of 0.687 the EPA fed fish had a

20:5n-3 utilisation efficiency of 62.1% described by the linear equation of y = 0.621x

+ 0.0003, R2 = 0.975 (Fig. 7.2a). Similarly, there was a significant linear relationship

of marginal ARA intake against marginal ARA gain (P < 0.05). The negative y

intercept value suggests that a maintenance value of around 0.012 g/kg0.796/d could

be determined for 20:4n-6. Using the live-weight exponent of 0.796 the ARA fed fish

had a 20:4n-6 utilisation efficiency of 91.9% described by the linear equation of y =

0.919x – 0.011, R2 = 0.965 (Fig. 7.2b). A summary of the maintenance demand and

utilisation efficiencies is presented in Table 7.9.

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Figure 7. 1 Specific fatty acid retention efficiency by barramundi fed increasing EPA (a-e) or ARA (f-j). The control (FO CTRL) fed fish are represented in each Figure with a triangle (∆). Bars indicate standard error means (n=3).

y = 0.45x2 - 7.8x + 99.9R² = 0.93

0

20

40

60

80

100

120

0 5 10 15 20

y = 0.09x2 - 1.1x + 66.9R² = 0.93

0102030405060708090

100

0 5 10 15 20

y = 0.27x2 - 3.6x + 91.8R² = 0.93

0

20

40

60

80

100

120

0 5 10 15 2020:4n-6 inclusion (g/kg)

y = 0.10x2 - 0.01x + 104.2R² = 0.57

0

20

40

60

80

100

120

140

0 5 10 15 20

y = -0.018x2 + 2.4x + 101.8R² = 0.67

020406080

100120140160

0 5 10 15 20

y = 0.11x2 - 2.1x + 87.8R² = 0.32

0

20

40

60

80

100

120

0 5 10 15 20

22:6

n-3

rete

tnio

n (%

)

20:5n-3 inclusion (g/kg)

y = -0.37x2 + 6.1x + 67.4R² = 0.86

0

20

40

60

80

100

120

0 5 10 15 20

20:4

n-6

rete

ntio

n (%

)

y = 0.15x2 - 3.3x + 76.0R² = 0.77

0

20

40

60

80

100

120

0 5 10 15 20

20:5

n-3

rete

ntio

n (%

)

y = 0.05x2 - 0.1x + 98.2R² = 0.21

0

20

40

60

80

100

120

140

0 5 10 15 20

18:3

n-3

rete

ntio

n (%

)y = 0.11x2 - 0.5x + 101.4

R² = 0.450

20406080

100120140

0 2 4 6 8 10 12 14 16 18 20

18:2

n-6

rete

ntio

n (%

)

(e) (j)

(i)(d)

(c)

(a)

(b)

(f)

(g)

(h)

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Table 7. 8 Retention efficiency of selected fatty acids in barramundi fed either increasing EPA or ARA analysed by polynomial contrasts.

EPA Polynomial contrasts ^ ARA Polynomial contrasts ^ Linear Quadratic Cubic Linear Quadratic Cubic 18:2n-6 retention 0.000 0.242 0.006 0.000 0.660 0.001 18:3n-3 retention 0.020 0.989 0.104 0.001 0.094 0.001 20:4n-6 retention 0.057 0.006 0.209 0.911 0.000 0.178 20:5n-3 retention 0.167 0.047 0.165 0.303 0.339 0.682 22:6n-3 retention 0.965 0.201 0.061 0.004 0.006 0.180

^ Degrees of freedom EPA 4, 10; ARA 3, 8; linear, quadratic and cubic values are P values at an alpha level of 0.05

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Figure 7. 2 Marginal utilisation efficiency assessments of 20:5n-3 (a) and 20:4n-6 (b) gain with varying intake by juvenile barramundi. Efficiency functions are described by the linear regression for 20:5n-3 gain y = 0.621x + 0.0003, R2 = 0.975 and 20:4n-6 gain y = 0.919x - 0.011, R2 = 0.965).

0.00

0.02

0.04

0.06

0.08

0.10

0.12

0.00 0.05 0.10 0.15 0.20

Mar

gina

l 20:

5n-3

gai

n (g

/kg0

.687

/d)

Marginal 20:5n-3 intake (g/kg0.687/d)

(a)

0.00

0.05

0.10

0.15

0.20

0.25

0.00 0.05 0.10 0.15 0.20 0.25

Mar

gina

l 20:

4n-6

gai

n (g

/kg0

.796

/d)

Marginal 20:4n-6 intake (g/kg0.796/d)

(b)

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Table 7. 9 Summary of maintenance demand and utilisation efficiencies by barramundi fed either increasing EPA or ARA.

Maintenance demand (g/kg

LWx/t)

Efficiency constant k

Intake:Gain ratio R2 P

value

20:5n-3; EPA 0.000 0.621 1.610 0.975 <0.01

20:4n-6; ARA 0.011 0.919 1.088 0.966 <0.05

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7.3.6 Gene identification and quantitative expression

Partial cDNA sequences of Lc COX1a, Lc COX1b, Lc COX2 and Lc ALOX-5 were

identified through degenerate PCR. BLAST similarity searches showed that

barramundi gene orthologs shared between 88 and 91% similarity with other teleost

fish at the amino acid level, and protein alignments showed similarity with other

teleost fish (Supplementary Figure 1a-d). The expression of eicosanoid pathway

genes (Lc COX1a, Lc COX1b, Lc COX2 and Lc ALOX-5), as well as the

mitochondrial ß-oxidation gene (Lc CPT1a) were analysed by quantitative real-time

RT-PCR in the liver and kidney of fish fed the highest and lowest EPA and ARA

diets and compared with the control fed fish.

The expression of Lc COX1b was significantly upregulated in the liver of the

EPA 1 fed fish compared the EPA 20 fed fish. (Fig. 7.3a). No other genes were

nutritionally regulated in the liver or kidney tissue of fish fed increasing EPA. In the

case of the ARA fed fish, the expression of Lc COX2 was significantly upregulated in

the liver of the ARA 20 fish compared to the ARA 1 fish (Fig. 7.4a). Similarly, the

expression of Lc ALOX-5 in the liver was significantly upregulated in the ARA 20 fish

compared to the ARA 1 fish (Fig. 7.4a). There was a significant down regulation of

the Lc COX1b in the kidney of the ARA 1 fish compared to the ARA 20 fish. The

expression of Lc COX2 was significantly upregulated in the kidney of the ARA 18 fish

compared to the ARA 1 fish. The Lc CPT1a expression in the kidney tissue was

significantly downregulated in the ARA 1 compared to the ARA 18 fish (Fig. 7.4b).

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Figure 7. 3 Eicosanoid pathway and mitochondrial fatty acid oxidation gene expression in the liver (a) and kidney (b) of juvenile barramundi fed increasing EPA. Gene expression is normalised to the EF1α and Luc reference genes and expressed relative to the control fish. Data were analysed by students t-test with significant differences defined as P<0.05.

-1.5

-1.0

-0.5

0.0

0.5

1.0

1.5

2.0

2.5

3.0

Rel

ativ

e ex

pres

sion

(log

2)

Liver EPA 1EPA 20

*

(a)

-1.0-0.8-0.6-0.4-0.20.00.20.40.60.81.0

Lc COX1a Lc COX1b Lc COX2 Lc ALOX-5 Lc CPT1a

Rel

ativ

e ex

pres

sion

(log

2)

Kidney EPA 1

EPA 20(b)

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Figure 7. 4 Eicosanoid pathway and mitochondrial fatty acid oxidation gene expression in the liver (a) and kidney (b) of juvenile barramundi fed increasing ARA. Gene expression is normalised to the EF1α and Luc reference genes and expressed relative to the control fish. Data were analysed by students t-test with significant differences defined as P<0.05.

-1.0

-0.5

0.0

0.5

1.0

1.5

2.0

2.5

Rel

ativ

e ex

pres

sion

(log

2)

Liver ARA 1ARA 18*

***

(a)

-2.5-2.0-1.5-1.0-0.50.00.51.01.52.02.5

Lc COX1a Lc COX1b Lc COX2 Lc ALOX-5 Lc CPT1α

Rel

ativ

e ex

pres

sion

(log

2)

Kidney ARA 1ARA 18

****

***

(b)

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7.4 Discussion

The growth performance of juvenile barramundi in the present study, using a pair-fed

feeding regime, was not affected by increasing dietary EPA or ARA content.

Moreover, there were no significant differences in growth performance compared to

a control diet containing only fish oil. Although it is an unlikely real-world scenario

to include high levels of any one LC-PUFA, these observations and those of a

previous study (Glencross and Rutherford, 2011), confirm that there are no growth

stimulatory effects owing to any individual LC-PUFA in juvenile barramundi . In

many species, EPA can exert cardio-protective benefits such as lowering

triglycerides and low-density lipoprotein levels (Aarsland et al., 1990; Cottin et al.,

2011). Whereas ARA on the other hand, is an essential and necessary precursor to

the 2-series and 4-series eicosanoids that mediate homeostasis during times of

environmental or physiological stress (Bell and Sargent, 2003).

Studies examining the dose-response of EPA in juvenile or growing fish are

relatively scarce and mostly concentrate on larval fish requirements (Izquierdo,

1996). Consistent with the present study, several studies in larval and juvenile fish

such as the Atlantic salmon Salmo salar (Thomassen et al., 2012), cobia

Rachycentron canadum (Trushenski et al., 2012), gilthead sea bream Sparus aurata

(Atalah et al., 2011), Senegalese sole Solea senegalensis (Villalta et al., 2008),

striped jack Pseudocaranx dentex (Watanabe et al., 1989) and turbot Scophthalmus

maximus (Bell et al., 1995) all concluded that EPA does not stimulate an improved

growth response. However, larval and juvenile red seabream Pagrus major were

found to have an EPA requirement with linear improvements in growth and survival

observed (Furuita et al., 1996; Takeuchi et al., 1990). The results of the present study

are consistent with the general consensus that size and species differences exist and

that an appropriate balance between these essential fatty acids is probably more

critical than their absolute inclusion (Tocher, 2003).

Also in agreement with the present study, a range of larval and juvenile

marine species such as Atlantic cod Gadus morhua (Bransden et al., 2005), gilthead

sea bream (Alves Martins et al., 2012; Atalah et al., 2011; Fountoulaki et al., 2003),

Senegalese sole (Villalta et al., 2005) and turbot (Estévez et al., 1999), were able

tolerate a wide range of dietary ARA levels with growth and survival found to be

independent of ARA inclusion. Recent studies have further demonstrated that

balanced ARA and EPA levels in the diet are more critical than either of these

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individually in terms of growth and other metabolic processes (Norambuena et al.,

2015).

Consistent with recent studies on juvenile barramundi held under similar

conditions, the diets in the present study were readily digested (Salini et al., 2015c).

There was a significant reduction in total lipid digestibility in the fish fed the diets

with the lowest levels of EPA and ARA compared to the control fish however this is

likely to be caused by the unavoidable higher SFA content of those diets.

Interestingly, the digestibility of the total SFA appears higher in those same

treatments as the fish attempt to cope with the changed fatty acid composition.

Despite this, the energy digestibility remained the same and confirms that there was

no dramatic effects caused by the different dietary strategies. Many studies, including

the present study, have demonstrated that the fatty acid composition of the tissues is

representative of the profile of the fed diet (Rosenlund et al., 2011). However, the

efficiency by which fatty acids are retained may represent a more metabolic or

biological importance to the fish. The DHA retention of the fish in the present study

fed increasing EPA did not change. However, the EPA and ARA retention were

inversely related and responded in a curvilinear fashion. Although the effect was not

dramatic, it indicated a point of sensitivity as EPA in the diet increased and the

barramundi retained more of the endogenous ARA. Glencross and Rutherford (2011)

reported disproportionate EPA and ARA retention in barramundi; however, this was

likely an effect of the increasing DHA level in combination with either EPA or ARA.

Atlantic salmon were also shown to conserve ARA (Norambuena et al., 2015),

whereas Senegalese sole attempted to synthesise ARA when dietary supply was

limited (Norambuena et al., 2013b).

Past work in our laboratory has suggested that the marginal efficiency of LC-

PUFA utilisation is low in growing barramundi, indicative of a higher turnover of

these fatty acids relating to their biological importance (Salini et al., 2015a). The

present study describes an assessment of the marginal efficiency of EPA and ARA

on restrictively pair-fed barramundi, while simultaneously controlling for other LC-

PUFA (rather than FO substitution). Under these experimental conditions, we report

the maintenance requirement of ARA to be 0.012 g/kg LW0.796/d, with a marginal

efficiency value of 91.9%. Although the requirement was low, this potentially

confirms that ARA is unusual in its characteristic metabolic requirement for this

species compared to other LC-PUFA. EPA on the other hand is apparently not

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required for maintenance in juvenile barramundi, suggesting that their maintenance

demands are easily met by endogenous reserves. The differences between the

marginal efficiency values of these studies warrant further investigation. In addition,

the EPA retention figures were modest with a calculated intake to gain ratio of 1.6:1,

further supporting this concept. This is consistent with other studies on barramundi

and red sea bream in that EPA is only modestly retained unless there is a gross

imbalance of other LC-PUFA (Glencross et al., 2003c; Glencross and Rutherford,

2011).

There is a very large body of research into the mechanisms of action of n-3

LC-PUFA on inflammatory pathways (Rangel-Huerta et al., 2012). The data from

the present study take the first steps in our understanding in barramundi by

identifying the key eicosanoid pathway enzymes and quantifying their nutritional

regulation. The current work verifies that barramundi possess at least two variants of

the cyclooxygenase 1 enzyme (Lc COX1a, Lc COX1b), a single cyclooxygenase 2

(Lc COX2) and an arachidonate 5-lipoxygenase (Lc ALOX-5). The fish in the present

study were not exposed to any form of physical or environmental stressors (apart

from being in research aquaria) that could cause an inflammatory response and

therefore the only trigger for a response is of a nutritional nature.

The present study demonstrated that either a high or low inclusion of EPA did

not modify the expression of any eicosanoid pathway gene in either the liver or the

kidney tissue. However, the only exception to this was the increased expression of Lc

COX1b in the liver of the EPA 1 fed fish. Conversely, there was a significant

downregulation of this gene in the kidney tissue of the ARA 1 fed fish. COX1

isoforms are widely distributed and generally constitutively expressed, however this

homeostatic function is now considered to be an oversimplified view (Rouzer and

Marnett, 2009). In agreement with the present study, there were non-significant (P =

0.06) yet quite measurable differences in COX1b expression in larval tongue sole

(Cynoglossus semilaevis) fed increasing ARA (Yuan et al., 2015). Further supporting

this notion, there was a nutritionally induced upregulation of COX1 and COX2

expression in rat mammory gland tissue by n-6 rich safflower oil (Badawi et al.,

1998). The results of the present study confirm that the Lc COX1b gene in

barramundi is inducible and the differences warrant further investigation into the

potential for pathophysiological effects. Some explanation for these inconsistencies

may be found in whole-body composition of wild barramundi collected from

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different environments (Nichols et al., 2014; Sinclair et al., 1983). These authors

found that Northern Australian barramundi, maintain a characteristically high ARA

content regardless of their environment. Therefore, it is suggested that barramundi

can modify the transcription of these genes depending on the potentially transient

nature of dietary ARA supply.

The EPA derived or anti-inflammatory eicosanoids are known to be

correlated with changes in transcription of fatty acid synthesis and β-oxidation genes

(Aarsland et al., 1990; Sijben and Calder, 2007) . However, the Lc CPT1α expression

in the present study was not affected by the inclusion level of either EPA or ARA,

with the exception of a slight decrease in the kidney tissue of the ARA 1 fish. This

may suggest that some other characteristic, perhaps of the fish oil base used in the

control diet caused this response. Additionally, Lc ALOX-5 expression was

upregulated in the liver tissue of the ARA 18 fish consistent with a modified

metabolic function. In a recent study, changes in ALOX-5 were also observed in

marine fish larvae in response to increasing dietary ARA (Yuan et al., 2015). In

contrast to the present study, these authors reported improved growth of larvae,

despite the potential for excessive generation of pro-inflammatory leukotrienes and

lipoxins (Rowley et al., 1995).

Past studies have demonstrated that nutritionally inducible COX2 genes exist

in several teleost species (Montero et al., 2015a; Yuan et al., 2015; Zuo et al., 2015).

The role of Lc COX2 as an active and rapidly inducible gene has undoubtedly played

a role in the modified metabolic function of the ARA fed fish during the present

study. The Lc COX2 expression was significantly increased in both liver and kidney

tissues suggesting that the highest inclusion of ARA was excessive or that the EPA

to ARA ratio was unbalanced.

To conclude, the present study supports that there is no phenotypic response

by barramundi to the addition of either EPA or ARA to the diets. However, there are

some metabolic changes to the retention and marginal utilisation efficiencies as a

result of the diets. Increasing the dietary EPA or ARA level also modulated the

expression of several eicosanoid metabolism and fatty acid oxidation genes. Further

studies should focus on the most appropriate balance of dietary LC-PUFA in light of

the current levels of fish oil substitution in aquafeeds. Further refinements could also

be made to factorial growth and feed utilisation models for barramundi with respect

to specific fatty acids and their marginal utilisation efficiencies.

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8.0 Defining the allometric relationship between size and nutrient

turnover in barramundi Lates calcarifer

Adapted from

Salini, M.J., Poppi, D.A., Turchini, G.M., Glencross, B.D., 2016. Defining the

allometric relationship between size and nutrient turnover in barramundi Lates

calcarifer. Comp. Biochem. Physiol. Part A. 201, 79-86

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8.1 Aims

Bioenergetic modelling of the nutrient flows in barramundi has been extensively

researched and ‘user friendly’ simulation programs are used routinely (Glencross,

2008; Glencross and Bermudes, 2010; 2011; 2012). One of the key assumptions and

constraints in the application of these models is that the live-weight (LW) exponent

values are constant. Studies have shown with barramundi, over a range of normal

temperatures, that this is generally the case for the energy, protein and lipid

exponents (Glencross and Bermudes, 2011). However, it is assumed that when

broken down into constituent fatty acids the body weight exponents are also

equivalent to that of the lipid as a complete nutrient.

A further refinement of those factorial bioenergetic models could include

consideration of the individual fatty acids and potentially amino acids in order to

better understand their utilisation in terms of productivity on a size independent

basis. Therefore, the aim of the present study was to determine the allometric scaling

effect of individual fatty acids in barramundi for use in future bioenergetic studies. In

addition, a re-evaluation of previously published data is used to refine the fatty acid

demands for maintenance and growth of barramundi using in silico predictive

modelling.

8.2 Materials and methods

The methodology used in the present experiment are detailed in the section 2.0

General methodology. Ethical clearance was approved for the experimental

procedures by the CSIRO Animal Ethics Committee (Application A3/2015).

8.3 Results

8.3.1 Fish compositional changes

The initial and final weights of the fish are presented in Table 8.1. In all size groups

of fish weight loss was between 12.9% for the smallest fish to 5.3% for the largest

fish. The condition factor was also lower in the fish after fasting. No fish died during

the experiment. The initial and final chemical composition of the fish were analysed

and reported in Table 8.1. The energy density of the barramundi of varying size

before and after fasting was best fitted to a power function with high R2 values of

0.845 and 0.844 respectively (Fig. 8.1). There was a decrease in the energy density of

the fasted fish (Fig. 8.1). The lipid density of the barramundi was best fitted to a

logarithmic function with initial and final R2 values of 0.711 and 0.744 respectively

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(Fig. 8.2). The logarithmic response after fasting appears to be driven by Treatment

F.

The individual fatty acid density of barramundi for each of the treatment size classes

is presented in Table 8.2 and the LC-PUFA density is plotted in Fig. 8.3. There was a

general increase in the fatty acid density with increasing size, concomitant with the

lipid composition of the fish (Table 8.1). The response after fasting was best fitted to

a logarithmic function that appears to be driven by the lipid content of Treatment F.

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174

| Pa

ge

Tab

le 8

. 1. P

erfo

rman

ce p

aram

eter

s and

che

mic

al c

ompo

sitio

n fo

r in

itial

and

fina

l bar

ram

undi

of v

aryi

ng si

zes.

Dat

a ar

e pr

esen

ted

as m

ean

± SE

M a

nd c

ompo

sitio

n da

ta a

re p

rese

nted

on

a w

et-w

eigh

t bas

is.

Tr

eatm

ent A

Tr

eatm

ent B

Tr

eatm

ent C

Tr

eatm

ent D

Tr

eatm

ent E

Tr

eatm

ent F

Bi

omet

ric

para

met

ers

Initi

al w

eigh

t (g/

fish)

10

.5 ±

0.1

19

.2 ±

0.1

28

.3 ±

0.1

12

2.4

± 0.

1 21

7.6

± 0.

4 44

3.7

± 1.

5 Fi

nal w

eigh

t (g/

fish)

9.

2 ±

0.1

17.3

± 0

.1

25.6

± 0

.1

114.

3 ±

0.1

206.

5 ±

0.3

42

0.0

± 1.

0 W

eigh

t los

s (g/

fish)

1.

4 ±

0.1

1.9

± 0.

0 2.

7 ±

0.2

8.1

± 0.

2 11

.1 ±

0.2

23

.7 ±

1.6

W

eigh

t los

s (%

) 12

.9 ±

0.7

9.

9 ±

0.1

9.6

± 0.

5 6.

6 ±

0.2

5.1

± 0.

1 5.

3 ±

0.3

Con

ditio

n in

itial

*

1.2

± 0.

0 1.

2 ±

0.0

1.3

± 0.

1 1.

2 ±

0.0

1.2

± 0.

1 1.

2 ±

0.0

Con

ditio

n fin

al*

1.1

± 0.

0 1.

0 ±

0.0

1.1

± 0.

1 1.

1 ±

0.0

1.1

± 0.

1 1.

1 ±

0.0

Initi

al c

ompo

sitio

n

D

ry m

atte

r (%

) 24

.4

24.4

27

.2

27.2

29

.7

30.9

Pr

otei

n (%

) 16

.0

15.2

17

.1

17.2

17

.9

19.2

A

sh (%

) 3.

8 3.

8 3.

7 3.

1 4.

1 4.

8 Li

pid

(%)

3.8

4.0

6.0

6.3

7.2

6.4

Gro

ss e

nerg

y (M

J/kg

) 5.

1 5.

2 6.

2 6.

5 7.

0 6.

9 Fi

nal c

ompo

sitio

n

D

ry m

atte

r (%

) 21

.7 ±

0.7

22

.0 ±

0.1

25

.6 ±

0.3

27

.4 ±

0.3

28

.1 ±

0.3

29

.6 ±

0.2

Pr

otei

n (%

) 15

.1 ±

0.6

15

.4 ±

0.1

16

.7 ±

0.4

17

.6 ±

0.5

18

.2 ±

0.3

18

.5 ±

0.1

A

sh (%

) 4.

5 ±

0.1

4.4

± 0.

3 4.

2 ±

0.1

3.7

± 0.

1 4.

2 ±

0.1

5.4

± 0.

1 Li

pid

(%)

1.6

± 0.

2 1.

9 ±

0.1

4.3

± 0.

1 5.

3 ±

0.2

5.2

± 0.

2 5.

1 ±

0.1

Gro

ss e

nerg

y (M

J/kg

) 4.

2 ±

0.1

4.4

± 0.

1 5.

4 ±

0.1

6.3

± 0.

1 6.

4 ±

0.1

6.4

± 0.

1 *C

ondi

tion

fact

or=w

eigh

t/len

gth^

3

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175

| Pa

ge

Tab

le 8

. 2 F

atty

aci

d de

nsity

in th

e fis

h (m

g/g/

fish)

aft

er 2

1 da

ys o

f fas

ting.

Dat

a w

ere

fitte

d to

loga

rith

mic

func

tions

and

pre

sent

ed a

s mea

n ±

SEM

. Tr

eatm

ent A

Tr

eatm

ent B

Tr

eatm

ent C

Tr

eatm

ent D

Tr

eatm

ent E

Tr

eatm

ent F

Eq

uatio

n R2

16:0

30

.0 ±

1.0

35

.1 ±

0.7

66

.0 ±

2.9

97

.9 ±

0.5

94

.8 ±

0.9

99

.1 ±

0.3

y=

19.7

28(±

0.10

1)ln

(x)

– 9.

833(

±0.3

98)

0.88

3

18:0

10

.8 ±

0.4

11

.6 ±

0.2

18

.6 ±

0.8

28

.1 ±

0.3

27

.0 ±

0.4

27

.2 ±

0.1

y=

4.93

5(±0

.028

)ln(x

) +

0.46

6(±0

.104

) 0.

873

18:1

n-9

39.3

± 0

.5

47.8

± 0

.2

90.0

± 4

.0

164.

3 ±

0.3

161.

0 ±

0.4

147.

8 ±

0.1

y=34

.580

(±0.

245)

ln(x

) –

32.3

92(±

0.82

4)

0.84

9

18:2

n-6

14.0

± 0

.0

17.3

± 0

.1

28.2

± 1

.1

57.9

± 0

.1

58.3

± 0

.5

51.9

± 0

.1

y=12

.511

(±0.

083)

ln(x

) –

13.0

06(±

0.28

1)

0.85

8

18:3

n-3

1.3

± 0.

3 1.

8 ±

0.1

3.5

± 0.

0 5.

8 ±

0.2

5.9

± 0.

2 5.

0 ±

0.2

y=1.

195(

±0.0

08)ln

(x)

– 0.

985(

±0.0

27)

0.79

9

20:4

n-6

2.6

± 1.

8 2.

5 ±

0.9

2.6

± 0.

1 3.

6 ±

1.3

4.2

± 2.

9 3.

1 ±

2.4

y=0.

325(

±0.0

04)ln

(x)

+ 1.

771(

±0.0

18)

0.53

1

20:5

n-3

4.1

± 6.

2 5.

0 ±

1.6

8.6

± 0.

3 9.

0 ±

5.5

8.8

± 7.

2 10

.1 ±

5.0

y=

1.40

8(±0

.009

)ln(x

) +

1.88

4(±0

.045

) 0.

763

22:5

n-3

3.3

± 1.

1 3.

7 ±

0.4

5.5

± 0.

1 6.

5 ±

0.9

6.3

± 1.

4 7.

1 ±

0.6

y=0.

954(

±0.0

05)ln

(x)

+ 1.

510(

±0.0

23)

0.86

7

22:6

n-3

13.9

± 4

.4

15.2

± 1

.0

20.2

± 0

.5

22.2

± 2

.7

21.7

± 4

.7

21.8

± 1

.8

y=2.

224(

± 0.

017)

ln(x

) +

10.6

49(±

0.0

73)

0.75

6

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176 | P a g e

Figure 8. 1 Energy density of barramundi of varying live-weight before (●=4.221(±0.010)x0.088(±0.001), R2 = 0.845) and after (○=3.359(±0.011)x0.118(±0.001), R2 = 0.844) fasting for 21 days.

012345678

0 100 200 300 400

Ener

gy (k

J/g)

Live-weight (g)

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177 | P a g e

Figure 8. 2 Lipid density of the barramundi of varying live-weight before (●=0.807(±0.019)ln(x) + 2.312(±0.002), R2 = 0.711) and after (○=0.981(±0.014)ln(x) – 0.083(±0.003), R2 = 0.744) fasting for 21 days.

012345678

0 100 200 300 400

Lipi

d (%

)

Live-weight (g)

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178 | P a g e

Figure 8. 3 Fatty acid density (mg/g lipid) in barramundi of varying live-weight after fasting for 21 days. Values were fitted to a logarithmic curve and equations are presented in Table 8.2.

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179 | P a g e

8.3.2 Determination of metabolic live-weight exponents

Somatic losses of energy, lipid and individual fatty acids were well described by the

function a*Xb (Table 8.3). A bootstrapping approach was used to generate

replications of coefficient (slope) and exponent values of energy, lipid and fatty acid

loss. An energy live-weight (LW) exponent of 0.817 was derived based on energy

losses after fasting and the equation is presented in Eqn. 8.1. Similarly, a lipid loss

LW exponent of 0.895 was derived based on lipid loss after fasting and the equation

is presented in Eqn. 8.2. The relationships between fatty acid losses and the

geometric mean weight over the range of sizes in the present study are presented in

Fig. 8.4 (A and B).

Energy loss (kJ/fish/day) = 0.104(±0.003)*(Live-weight) 0.817(±0.010), R2 = 0.949 (8.1)

Lipid loss (g/fish/day) = 0.002(±0.000)*(Live-weight) 0.895(±0.007), R2 = 0.985 (8.2)

There was a significant difference in the derived LW exponent values for specific

fatty acids confirming that they are for the most part, different from that of the total

lipid (LW0.895). However, there was no difference in the exponent values of 16:0 and

18:3n-3 and 18:0 and 20:4n-6 (ARA) (Table 8.3). The LW exponent values for

22:6n-3 (DHA), 22:5n-3 (DPA) and 20:5n-3 (EPA), 0.792, 0.748 and 0.687

respectively, were all significantly lower than that of lipid while 18:1n-9 was higher

at 0.954 (Table 8.3). The weighted exponent values were calculated and the sum of

all fatty acids presented was equal to 0.854 ± 0.033 (Table 8.3; sum not presented)

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180 | P a g e

Table 8. 3 Coefficient and exponent values derived from the power function (y=aXb) of fatty acid loss over a wide range of fish sizes from ~10 g to ~440 g. Replication was derived by manually bootstrapping each individual value and presented as mean ± SEM (n=18).

Coefficient (a)

Exponent (b) R2 Weighted

Exponent* Energy 0.104 ± 0.003 0.817 ± 0.010 0.949 NA Lipid 0.002 ± 0.000 0.895 ± 0.007a 0.985 NA

16:0 0.346 ± 0.010 0.890 ± 0.024a 0.992 0.208 ± 0.012 18:0 0.107 ± 0.003 0.876 ± 0.010b 0.991 0.061 ± 0.004 18:1n-9 0.399 ± 0.011 0.954 ± 0.008c 0.992 0.350 ± 0.007 18:2n-6 0.182 ± 0.005 0.915 ± 0.009d 0.992 0.120 ± 0.003 18:3n-3 0.026 ± 0.001 0.899 ± 0.007a 0.991 0.013 ± 0.000 ARA 0.012 ± 0.000 0.796 ± 0.007b 0.942 0.009 ± 0.001 EPA 0.114 ± 0.002 0.687 ± 0.005e 0.990 0.021 ± 0.001 DPA 0.038 ± 0.001 0.748 ± 0.008f 0.985 0.015 ± 0.001 DHA 0.138 ± 0.003 0.792 ± 0.006g 0.990 0.058 ± 0.004

P value NA <2.2-16 NA NA NA, not analysed. Superscript letters indicate significant differences. * Calculated as geometric mean weight of each fatty acid x exponent (b).

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181 | P a g e

8.3.3 Metabolic demands for fatty acids

A re-evaluation of the marginal utilisation efficiencies of individual fatty acids using

the fatty acid LW exponents derived from the present experiment is presented in

Table 8.4. This re-evaluation was performed on data from three separate experiments

(Glencross and Rutherford, 2011; Salini et al., 2015a; Salini et al., 2016). The linear

equations of the marginal intake to marginal gain ratio were extrapolated to zero (0 =

b(x) + a) in order to obtain estimated maintenance requirement values. In the first

experiment, the LC-PUFA all produced negative requirement values whereas all

other shorter-chain length and more saturated fatty acids have a determined

requirement. In the subsequent studies, the marginal utilisation efficiencies for ARA,

EPA and DHA were higher, contrasting those of the first study. There was no

requirement value established for EPA and DHA, however, there was a maintenance

requirement of 0.012 g/kg0.880/d determined for ARA.

Iteratively determined fatty acid maintenance, fatty acid gain, fatty acid for growth

and total requirements are presented in Table 8.5. For each of the size classes the

values are presented for barramundi fed either 100% fish oil or 100% poultry oil

diets adapted from Salini et al. (2015a).

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182 | P a g e

Table 8. 4 Re-evaluation of the marginal efficiency of fatty acid utilisation in barramundi. Data were transformed to LW exponent values determined from the present study. Maintenance requirements and intake to gain ratio for each fatty acid are presented

Fatty acid Slope Intercept R2 Req# 1/k* Salini et al., (2015a)

16:0 2.258 -0.536 0.712 0.237 0.443 18:0 1.539 -0.068 0.837 0.044 0.650 18:1 1.111 -0.178 0.951 0.161 0.900 18:2n-6 0.821 -0.025 0.751 0.031 1.218 18:3n-3 1.040 -0.010 0.881 0.010 0.962 ARA 0.192 0.005 0.427 -0.025 5.222 EPA 0.305 0.005 0.953 -0.017 3.279 DPA 0.340 0.008 0.783 -0.023 2.943 DHA 0.271 0.014 0.952 -0.050 3.693

Salini et al., (2016) ARA 0.919 -0.011 0.965 0.012 1.088 EPA 0.621 0.000 0.975 -0.000 1.610

Glencross and Rutherford, (2011) DHA 1.065 0.046 0.961 -0.043 0.939

# Maintenance requirement (g/kgx/d) determined by extrapolation to 0 = b (x) + a. * Intake to gain ratio.

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183 | P a g e

Figure 8. 4 Fatty acid (A and B) loss in fasted barramundi of varying live-weight. Data are (n=3) mean ± SEM. Values were fitted to a power function and equations are presented in Table 8.3.

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184

| Pa

ge

Tab

le 8

. 5 F

atty

aci

d de

man

ds in

gro

win

g ba

rram

undi

fed

eith

er 1

00%

fish

oil

(FO

) or

100%

pou

ltry

oil (

PO) d

iets

mai

ntai

ned

at 3

0 °C

. C

alcu

latio

ns a

re b

ased

on

the

pred

ictiv

e gr

owth

mod

els a

nd u

tilis

atio

n ef

ficie

ncie

s fro

m p

ublis

hed

stud

ies f

or th

is sp

ecie

s

Fish

live

wei

ght (

g/fis

h)

50

100

500

1000

20

00

50

100

500

1000

20

00

Expe

cted

gro

wth

(g/d

ay)1

2.13

2.

88

5.81

7.

85

10.6

1 2.

13

2.88

5.

81

7.85

10

.61

Die

t2 FO

FO

FO

FO

FO

PO

PO

PO

PO

PO

16

:0 d

eman

ds

16

:0-m

aint

(mg/

fish/

d)3

0.00

4 0.

007

0.03

0 0.

055

0.10

3 0.

004

0.00

7 0.

027

0.05

1 0.

094

16:0

gai

n (m

g/fis

h/d)

4 0.

028

0.04

2 0.

108

0.16

3 0.

245

0.02

5 0.

038

0.09

9 0.

150

0.22

5 16

:0-g

row

th (m

g/fis

h/d)

5 0.

012

0.01

8 0.

048

0.07

2 0.

109

0.01

1 0.

017

0.04

4 0.

066

0.10

0 16

:0-to

tal (

mg/

fish/

d)6

0.01

6 0.

026

0.07

8 0.

127

0.21

1 0.

015

0.02

3 0.

071

0.11

7 0.

194

18:0

dem

ands

7

18:0

-mai

nt (m

g/fis

h/d)

0.

000

0.00

0 0.

002

0.00

3 0.

006

0.00

0 0.

000

0.00

2 0.

003

0.00

5 18

:0 g

ain

(mg/

fish/

d)

0.00

8 0.

012

0.03

2 0.

048

0.07

2 0.

008

0.01

2 0.

031

0.04

7 0.

070

18:0

-gro

wth

(mg/

fish/

d)

0.00

5 0.

008

0.02

1 0.

031

0.04

7 0.

005

0.00

8 0.

020

0.03

0 0.

046

18:0

-tota

l (m

g/fis

h/d)

0.

005

0.00

8 0.

022

0.03

4 0.

052

0.00

5 0.

008

0.02

2 0.

033

0.05

1 18

:1 d

eman

ds7

18

:1-m

aint

(mg/

fish/

d)

0.00

3 0.

006

0.02

7 0.

051

0.09

9 0.

004

0.00

7 0.

032

0.06

2 0.

120

18:1

gai

n (m

g/fis

h/d)

0.

038

0.05

7 0.

148

0.22

2 0.

335

0.04

6 0.

069

0.17

9 0.

269

0.40

6 18

:1-g

row

th (m

g/fis

h/d)

0.

034

0.05

1 0.

133

0.20

0 0.

302

0.04

1 0.

062

0.16

1 0.

242

0.36

5 18

:1- t

otal

(mg/

fish/

d)

0.03

7 0.

057

0.15

9 0.

251

0.40

1 0.

045

0.06

9 0.

193

0.30

4 0.

485

18:2

dem

ands

7

18:2

-mai

nt (m

g/fis

h/d)

0.

000

0.00

0 0.

001

0.00

2 0.

005

0.00

0 0.

000

0.00

2 0.

004

0.00

7 18

:2 g

ain

(mg/

fish/

d)

0.01

0 0.

014

0.03

7 0.

056

0.08

5 0.

014

0.02

1 0.

055

0.08

4 0.

126

18:2

-gro

wth

(mg/

fish/

d)

0.01

2 0.

017

0.04

5 0.

068

0.10

3 0.

017

0.02

6 0.

067

0.10

2 0.

153

18:2

-tota

l (m

g/fis

h/d)

0.

012

0.01

8 0.

047

0.07

1 0.

108

0.01

8 0.

026

0.06

9 0.

105

0.16

0 18

:3 d

eman

ds7

18

:3-m

aint

(mg/

fish/

d)

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

18:3

gai

n (m

g/fis

h/d)

0.

001

0.00

1 0.

004

0.00

5 0.

008

0.00

2 0.

002

0.00

6 0.

009

0.01

3

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185

| Pa

ge

18:3

-gro

wth

(mg/

fish/

d)

0.00

1 0.

001

0.00

3 0.

005

0.00

8 0.

001

0.00

2 0.

006

0.00

9 0.

013

18:3

-tota

l (m

g/fis

h/d)

0.

001

0.00

1 0.

004

0.00

5 0.

008

0.00

1 0.

002

0.00

6 0.

009

0.01

3 AR

A de

man

ds7

A

RA

-mai

nt (m

g/fis

h/d)

0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 A

RA

gai

n (m

g/fis

h/d)

0.

001

0.00

1 0.

003

0.00

5 0.

007

0.00

1 0.

001

0.00

2 0.

003

0.00

5 A

RA

-gro

wth

(mg/

fish/

day)

0.

004

0.00

6 0.

016

0.02

3 0.

035

0.00

3 0.

004

0.01

1 0.

016

0.02

4 A

RA

-tota

l (m

g/fis

h/da

y)

0.00

4 0.

006

0.01

6 0.

024

0.03

6 0.

003

0.00

4 0.

011

0.01

6 0.

024

EPA

dem

ands

7

EPA

-mai

nt (m

g/fis

h/d)

0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 EP

A g

ain

(mg/

fish/

d)

0.00

5 0.

007

0.01

8 0.

027

0.04

0 0.

001

0.00

1 0.

003

0.00

5 0.

008

EPA

-gro

wth

(mg/

fish/

day)

0.

015

0.02

2 0.

058

0.08

7 0.

131

0.00

3 0.

004

0.01

1 0.

017

0.02

5 EP

A-to

tal (

mg/

fish/

day)

0.

015

0.02

2 0.

058

0.08

7 0.

131

0.00

3 0.

004

0.01

1 0.

017

0.02

5 D

PA d

eman

ds7

D

PA-m

aint

(mg/

fish/

d)

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

DPA

gai

n (m

g/fis

h/d)

0.

001

0.00

2 0.

006

0.00

9 0.

013

0.00

1 0.

001

0.00

3 0.

004

0.00

6 D

PA-g

row

th (m

g/fis

h/da

y)

0.00

4 0.

007

0.01

7 0.

026

0.03

9 0.

002

0.00

3 0.

008

0.01

2 0.

017

DPA

-tota

l (m

g/fis

h/da

y)

0.00

4 0.

007

0.01

7 0.

026

0.03

9 0.

002

0.00

3 0.

008

0.01

2 0.

017

DH

A de

man

ds7

D

HA

-mai

nt (m

g/fis

h/d)

0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 0.

000

0.00

0 D

HA

gai

n (m

g/fis

h/d)

0.

005

0.00

7 0.

019

0.02

9 0.

043

0.00

2 0.

003

0.00

8 0.

012

0.01

8 D

HA

-gro

wth

(mg/

fish/

day)

0.

018

0.02

7 0.

070

0.10

6 0.

159

0.00

8 0.

011

0.02

9 0.

044

0.06

7 D

HA

-tota

l (m

g/fis

h/da

y)

0.01

8 0.

027

0.07

0 0.

106

0.15

9 0.

008

0.01

1 0.

029

0.04

4 0.

067

1 M

odel

led

daily

gro

wth

bas

ed o

n 30

°C w

ater

tem

pera

ture

(Gle

ncro

ss, 2

008;

Gle

ncro

ss a

nd B

erm

udes

, 201

2).

2 D

ata

for t

he c

alcu

latio

n of

fatty

aci

d de

man

ds w

ere

take

n fro

m p

revi

ousl

y pu

blis

hed

stud

ies (

Salin

i et a

l., 2

015)

. 3

Mai

nten

ance

dig

estib

le fa

tty a

cid

requ

irem

ents

bas

ed o

n ex

trapo

late

d va

lues

(Tab

le 4

), pe

r exp

onen

t tra

nsfo

rmed

fatty

aci

d bo

dy w

eigh

t (Ta

ble

3) a

nd

mul

tiplie

d by

the

who

le b

ody

fatty

aci

ds (g

/kg/

fish)

. 4

Fatty

aci

d co

nten

t of t

he m

odel

led

live-

wei

ght g

ain.

5

Dig

estib

le fa

tty a

cid

dem

and

base

d on

the

gain

thro

ugh

mod

elle

d gr

owth

div

ided

by

the

utili

satio

n ef

ficie

ncy

of th

at fa

tty a

cid.

6

Com

bine

d di

gest

ible

dem

and

for b

oth

mai

nten

ance

and

gro

wth

. 7

Ref

er to

16:

0 de

man

ds.

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8.4 Discussion

One of the key assumptions of nutritional modelling is that the allometric scaling

exponent values for biological variables ascribed to transform live-weight (LW) are

constant (Glencross and Bermudes, 2011; Lupatsch et al., 2003). In reality, exponent

values for the metabolic LW for energy in aquatic species usually fit around an

average value of 0.80, which has been adopted and used routinely (Bureau et al.,

2002; Cho and Kaushik, 1990; Cui and Liu, 1990; Lupatsch et al., 2003; NRC,

2011). Similarly for protein, a range of LW exponents have been used to describe the

allometric relationship and the value of 0.70 is routinely used under normal

physiological conditions (Lupatsch et al., 1998; Pirozzi et al., 2010). Arguably the

average of the weighted LW exponents for lipid and protein energy should be equal

to that of gross energy, therefore 0.90 can be ascribed to LW exponent of lipid

(Glencross and Bermudes, 2011). The development of predictive models of energy

transactions that also consider the individual compounds of nutrients rather than

aggregates of energy would help in understanding the discrete biochemical

relationships that exist and some attempts at compartmentalising these have been

made in monogastric animals (Birkett and Lange, 2007). However, these are not

common in the literature or in practice for aquatic species. The present study

therefore investigated the allometric scaling effect of individual fatty acids in

barramundi held at a constant temperature.

In the present study, the assessment of somatic energy before and after fasting was

highly consistent with the study of Glencross and Bermudes (2011). This suggests

that over the variable size range of fish used in the present study and held at an

optimal temperature, fasting losses are quite predictable, further validating the

methodology to be extended to individual fatty acids. One caveat of the present study

was that the size class selection of the fish was limited to two initial shipments of

fish that were held in stock aquaria and subsequently graded. Therefore we cannot

conclude on what may happen outside this range or within the range if additional

treatments were available. The increasing live-weight as a function of energy and

lipid density of the fish was best fitted to power and natural logarithmic equations

respectively. The lower than expected analytical values obtained for lipid in

Treatment F are likely related to the nutritional status of the fish prior to the

commencement of the study however there is no consistent explanation for this.

Consistent with other studies, the loss of lipid was concomitant to the loss of energy,

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confirming that lipid is preferentially metabolised under fasting conditions in order to

retain protein (Glencross and Bermudes, 2011; Lupatsch et al., 1998).

The somatic losses determined in the present study were best described by power

functions, following the equation y=a*Xb, where a represents a temperature

dependent coefficient, X is the live-weight (LW) and b the scaling exponent. An

important finding of the present study was that the energy LW exponent value (0.817

± 0.010) is consistent with the commonly reported value of 0.80. This is an important

finding as previous studies have found that even slight variations in the reported

exponent values can lead to substantially different outcomes when applied to the

determination of maintenance energy demands (Pirozzi, 2009). The lipid exponent

value of 0.895 ± 0.007 was also highly consistent with the values previously

described for barramundi (Glencross and Bermudes, 2011). One caveat of the present

study was that only a single temperature range was examined; however, it is reported

that provided barramundi are held within their normal temperature range then the

values should be mostly consistent (Glencross and Bermudes, 2011).

The fatty acid allometric scaling exponent values derived in the present study were

significantly different and ranged from 0.687 ± 0.005 for EPA to 0.954 ± 0.008 for

18:1n-9. With the exception of ARA, all the LC-PUFA exponent values were

significantly lower than the more dominant shorter-chain length and more saturated

fatty acids. The individual fatty acids presented as weighted exponent values are also

consistent with that of lipid as a complete nutrient (0.854 ± 0.033 vs. 0.895 ± 0.007

respectively). The lower exponent values recorded for the LC-PUFA suggest that

there is likely to be a greater turnover of these fatty acids in the juvenile fish

indicating more specific biological demands. While the higher exponents (eg. 18:1n-

9) suggest there is less effect of size and lower biological demands for those fatty

acids. Additionally, the LC-PUFA with lower exponent values also have marginal

utilisation efficiencies that are considerably lower than other more dominant fatty

acids (Salini et al., 2015a). This lends further support to the theory that they are more

biologically important and that they are selectively retained in the tissues,

corroborating evidence from past studies in barramundi (Glencross and Rutherford,

2011; Salini et al., 2015c). Moreover, the significance of LC-PUFA is also be

supported by their anti-inflammatory role in the production of eicosanoids and

specialised pro-resolving mediators (Bannenberg and Serhan, 2010; Rowley et al.,

1995; Serhan, 2010).

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The energy from metabolizable food in juvenile animals can only really be

partitioned into maintenance and growth as reproductive effort is essentially zero

(Lucas, 1996; NRC, 2011). Moreover, the concept of maintenance and growth

demands are additive in terms of productivity (Bureau et al., 2002; Clarke and

Fraser, 2004). A range of data pools were used in the analysis of the present study in

order to iteratively determine the metabolic demands for specific fatty acids in

growing barramundi. The partial (marginal) efficiency values from Salini et al.

(2015a) were re-calculated with the newer exponent values derived in the present

study. The LW exponent of lipid (0.90) was applied to individual fatty acids and

acknowledged as an assumption in that earlier study. This re-calculation allowed a

more accurate determination of maintenance fatty acid demands given the

acknowledged impact that this transformation can have on the determination of that

parameter (Pirozzi, 2009). We also assessed the suitability of marginal efficiency

values for ARA, EPA and DHA determined from subsequent studies (Glencross and

Rutherford, 2011; Salini et al., 2016). However, these values were inconsistent with

those of Salini et al. (2015a) and not included in the final analysis (Table 5). Reasons

for these inconsistencies are likely to be due to the large differences in the initial size

of the fish and the feeding regime utilised.

The results of the present study demonstrate that the different fatty acids are utilised

with different efficiencies. However, contrary to what might be expected, the levels

of LC-PUFA required in barramundi fed a fish oil based diet are numerically higher

than those fed a poultry oil based diet. This apparent difference is driven largely by

the deposition demands of individual fatty acids rather than catabolism or other

processes. Based on the demands (requirements) for maintenance presented in Table

8.5, we could conclude that the LC-PUFA requirements are negligible (Birkett and

Lange, 2007). This conclusion may be more generally applied to larger growing

barramundi however, evidence suggests that essential fatty acid requirements are

more pronounced during the rapid growth phase of juveniles, and virtually negligible

at larger fish sizes (Salini et al., 2015c).

The relative contribution of the more dominant shorter-chain length and more

saturated fatty acids for the provision of energy is clear. This corroborates with data

recently obtained in barramundi where the monounsaturated and to a lesser extent

saturated fatty acids ‘spared’ LC-PUFA for deposition and were preferentially

utilised as energy sources (Salini et al., 2015b). This supports that the available lipids

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are partitioned into either those fatty acids directed towards oxidative fates for

generating energy or those directed towards other downstream biological purposes

such as eicosanoid production.

There are many potential assumptions in the application of energetic models

(Glencross, 2008). The current allometric assessment only considers a single

phenotypic parameter (live-weight). Not surprisingly, past reports have concluded

that temperature plays a key role in the metabolism of ectotherms, including fish

(Clarke and Johnston, 1999; Clarke and Fraser, 2004; Glencross and Bermudes,

2011; Pirozzi et al., 2010). With barramundi, Glencross and Bermudes (2011)

demonstrated that the allometric scaling over a range of temperatures did change;

however, the response was not dramatic under normal thermal conditions for the

species. Therefore, we assume that the effect of temperature would be minimised by

using a constant ‘optimal’ temperature of 30 °C.

Additionally, there are many studies investigating the metabolic rate in animals and

these relationships with size can usually be described similarly using non-linear

power equations or variants of these (Clarke and Johnston, 1999; White, 2011). The

assumption in the present study is that the standard metabolic rate does not change

under fasting conditions as this could further impact the somatic losses incurred.

There is evidence to suggest that in fish and crustaceans, the standard metabolic rate

is reduced by up to 50% during fasting and this is due partly to decreased protein

synthesis (O'Connor et al., 2000; Simon et al., 2015). Without an estimation of

oxygen consumption or another measure of standard metabolic rate, we cannot

conclude on what might happen on a temporal basis under fasting conditions.

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Conclusions The series of studies presented within this thesis explored many aspects of lipid

metabolism in barramundi (Lates calcarifer). The experimental chapters each

provide an appropriately referenced, comprehensive discussion section that was

adapted from the corresponding published manuscripts. The conclusions from each

chapter are presented below. The first experiment followed an applied approach in

understanding the effect of diluting FO with PF in barramundi diets. This study also

developed methodology in order to predict the fillet composition of LC-PUFA in an

attempt to meet the minimum intake requirements proposed by the FAO for humans.

The study demonstrated that PF can completely substitute fish oil in growing

barramundi. There were no aberrations to fish growth performance or feed utilisation

parameters, however, there were clear differences in the retention and marginal

efficiencies of LC-PUFA utilisation. The fish responded to increasing PF by

improving the retention of LC-PUFA; however, the marginal efficiency of LC-PUFA

was relatively low, and reasons for this need to be further explored. Moreover the

increasing use of PF had a clear impact on the fillet LC-PUFA content, which needs

to be carefully considered in order to manage the defined impacts on meat LC-

PUFA.

After establishing that the effect of poultry fat (rich in monounsaturated fatty acids)

was minimal in growing barramundi we conducted a more comprehensive

investigation into the effect of fatty acid class on the performance of juvenile

barramundi. The fatty acids can be assembled into classes based on their biochemical

structure, including the saturated fatty acids (SFA) and monounsaturated fatty acids

(MUFA). The results demonstrated that the inclusion of a 2:1 or 1:2 ratio of SFA to

MUFA did not lead to a reduction in growth performance of juvenile barramundi.

However, a range of other metabolic modifications were observed. Notable was the

LC-PUFA sparing effect of both MUFA and SFA. Additionally, SFA and MUFA

were preferentially metabolised and deposited in the whole body and liver tissue

proportional to their respective intake. The low digestibility of specific fatty acids

(18:0 and 16:0) is consistent with other studies and may have an impact in the long

term utilisation of the SFA rich diet. These results clearly indicate that consideration

must be given to the proportion of either SFA or MUFA during diet formulation, as

these two classes of fatty acids can influence the in vivo metabolism of fatty acids

and the final fatty acid composition of the whole fish.

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After consideration of the different classes of fatty acids, a subsequent study was

designed to investigate the effect of different lipid classes, both neutral lipid and

polar lipid (NL and PL respectively), from marine or non-marine sources. Studies

have consistently demonstrated a range of advantages when using phospholipid-rich

lipid sources in diets for larval and juvenile fish. In this study, we reported for the

first time the use of phospholipid-rich krill oil (KO) and also soybean lecithin (SL)

compared to neutral lipid sources including fish oil (FO) and soybean oil (SO). In

support of the vast majority of studies, we demonstrated that the inclusion of either

marine or non-marine phospholipid maintains performance of juvenile barramundi

equivalent to a FO based control diet. An interesting result of the study was the

differences observed between both the non-marine (omega-6 rich) diets. The fish fed

SL avoided gross signs of EFA deficiency which was in contrast to the SO fed fish.

However, the dietary SO affected the FCR and some sub-clinical markers indicating

a modified metabolic function.

After these preliminary studies, we concluded that barramundi of a larger size

(~200g fish) generally tolerated diets mostly devoid of FO. In order to test whether

this would hold true on smaller baramundi, we conducted an experiment that

comprehensively investigated the aetiology of the onset and progression of EFA

deficiency in juvenile barramundi. Juvenile barramundi showed signs of modified

metabolic function and potentially signs of essential fatty acid (EFA) deficiency in

the absence of n-3 LC-PUFA. The EFA deficient diets clearly impacted growth

performance and feed utilisation in as little as two weeks. Discrete differences in the

utilisation of dietary lipid and also specific fatty acids suggest that in the absence of

EFA, signs of deficiency were evident substantiating their essentiality in juvenile

barramundi. In addition, a range of clinical abnormalities manifested in the fish fed

the EFA deficient diet. Transcription of genes involved in fatty acid metabolism

consistently demonstrated that those fish receiving the EFA deficient diet were

affected after as little as two weeks. This lends support to the hypothesis that juvenile

barramundi have a determined requirement for EFA. The importance of developing

and then testing an appropriate hypothesis in nutritional studies is also highlighted.

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Following this study, a dose-response experiment was conducted in order to clarify

the biological role of EPA and ARA in juvenile barramundi. This study builds on an

already published assessment of the quantitative DHA requirements in barramundi

and provides a more complete understanding of LC-PUFA metabolism and

requirements in the species. Past studies had indicated that the effect of DHA on

growth was negligible and our study supports this conclusion in that there was no

phenotypic response by barramundi to the addition of either EPA or ARA to the

diets. However, there were some modification to the retention and marginal

utilisation efficiencies as a result of the diets. Increasing the dietary EPA or ARA

level also modulated the expression of several eicosanoid metabolism and fatty acid

oxidation genes. The role of Lc COX2 as an active and rapidly inducible gene has

undoubtedly played a role in the modified metabolic function of the ARA fed fish

during the present study. It is therefore recommended that further studies should

focus on the most appropriate balance of dietary LC-PUFA in light of the current

levels of fish oil substitution in aquafeeds.

A bioenergetic modelling approach was used in several experiments throughout this

thesis in order to generate an understanding of and eventually predict certain

parameters such as LC-PUFA deposition in the tissues and fatty acid utilisation

efficiencies. Different nutrients will almost certainly have different energetic

efficiencies depending on many factors and therefore, we designed a final

experiment that assessed the allometric scaling effect of specific fatty acids after

fasting for 21 days in barramundi. The underlying assumption so far has been that the

scaling exponent of lipid (0.90) could be applied at a nutrient level to any situation

involving fatty acids, including the calculation of maintenance demands. The results

of the study indicate that there are differences in the utilisation efficiencies of fatty

acids, corroborating evidence from past studies. After re-evaluating data from three

separate experiments, we have concluded that the biggest driver in our understanding

of LC-PUFA metabolism in barramundi is that of deposition demand. We have also

suggested that the metabolizable lipid can be broadly separated into that destined for

catabolism and that which is conserved in the tissues for downstream biological

purposes. Empirically based models should now attempt to consider the energetic

costs associated with the lipid metabolic pathway, as this would be the logical

progression of the current work.

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General conclusions The research presented within this thesis collectively provides the reader and the

scientific community with a coherent, up-to-date body of work that makes a

significant contribution to the understanding of lipid metabolism and physiology in

the barramundi (Lates calcarifer). After several decades of research and commercial

development of the barramundi industry, there is now a greater understanding of

their overall nutritional management. Significant advances were made in

understanding the utilisation of alternative oils, the effect of lipid and fatty acid

classes, essential fatty acid deficiency and long-chain polyunsaturated fatty acid

requirements. In addition, advances were made in the bioenergetic modelling of LC-

PUFA. It is anticipated that the knowledge gained throughout this work will become

more commercially relevant in light of the volatile global fish oil market. While there

are potentially other avenues that could be investigated, the present work addressed

many aspects of lipid nutrition in barramundi from an applied approach towards a

more detailed fundamental understanding of lipid metabolism.

Overall, the results presented within this thesis build on published data and several

recommendations could be made that may become practical solutions for the

growing industry:

A minimum requirement of at least 20 g/kg LC-PUFA in growing barramundi

up to ~200g should be respected.

Larger barramundi are more tolerant to reduced FO, however, a more optimal

LC-PUFA in the flesh could be achieved with appropriate blending strategies.

Barramundi adapt well to oils rich in SFA or MUFA, however, the reduced

digestibility of SFA is a concern.

n-6 fatty acids from soybean oil and ARA rich oil can impact negatively on

performance, suggesting that n-3/n-6 balance is critical in maintaining

metabolic homeostasis.

Factorial modelling of LC-PUFA deposition and LC-PUFA maintenance

requirements and utilisation efficiencies is now made possible.

Future investigations may be warranted particularly from a nutritional health aspect.

There is a growing area of research focusing on the welfare of cultured aquatic

animals. There is also a growing range of products available for the prevention of

disease and nutritional management of fish and examination of many of these is still

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ongoing. Further to this, as more complex instrumentation is becoming routinely

available in laboratories there is significant potential to expand areas of research

particularly in the nutritional health area, at a cellular or molecular level. For

example the specialised pro-resolving mediators have scarcely been investigated in

fish despite their relative importance in inflammatory response and tissue

homeostasis. Lastly, we still have a limited understanding of the complex vitamin

and mineral interactions in the barramundi and many other species. Therefore, future

research should invest in more understanding of these issues with obvious animal

welfare and commercial benefits.

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Appendix - Supplementary figures

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