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Additional file 3: The figures of the heritability estimates of the SNPs in LASSO analysis for 29 investigated conformation traits with thresholds ascertained with 1,000 permutations .
| Date post: | 31-Dec-2015 |
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Additional file 3: The figures of the heritability estimates of the SNPs in LASSO analysis for 29 investigated conformation traits with thresholds ascertained with 1,000 permutations .
Figure legend
The figures of the heritability estimates of the SNPs in
LASSO analysis for 29 investigated conformation
traits with thresholds ascertained with 1,000
permutations . Five hundred SNPs against the
heritability of 29 traits were plotted. The dotted line is
the thresholds, which was ascertained with 1,000
permutations.
0 100 200 300 400 500
0.0000.002
0.004
0.006
0.0080.010
0.012
Conformation (final score)
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Dairy character
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Angularity
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Capacity
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Stature
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
Body depth
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Loin strength
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
Height at front end
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.004
0.008
0.012
Size
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
0.020
Chest width
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Rump
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Rump width
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Rump angle
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Feet and legs
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
0.012
Bone quality
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.004
0.008
0.012
Foot angle
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.004
0.008
0.012
Rear legs side view
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
Mammary system
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
Fore udder
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Rear udder
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
Udder depth
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Udder texture
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Median suspensory
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.004
0.008
0.012
Fore attachment
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.005
0.010
0.015
Fore teat placement
he
rita
bili
ty
0 100 200 300 400 500
0.0000.0020.0040.0060.0080.0100.012
Teat length
he
rita
bili
ty
0 100 200 300 400 500
0.0000.0020.0040.0060.0080.0100.012
Rear attach height
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.002
0.004
0.006
0.008
0.010
Rear attach width
he
rita
bili
ty
0 100 200 300 400 500
0.000
0.004
0.008
0.012
Rear teat placement
he
rita
bili
ty
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