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First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an...

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First results from the Biocams J. Brunner
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Page 1: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

First results from the Biocams

J. Brunner

Page 2: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

• Cameras on floor 1 and floor 5 together with an OM and an ADCP

• Floor 1 – 80m above sea floor

• Floor 5– 270m above sea floor– ~floor 13 normal line

Installation on IL07

Page 3: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Camera

AXIS221 vidéosurveillance

Night view capabilitiesView field up to 90 degreeSensitive into infraredView field & focus can be set manuallyDiaphragm & exposure time automatically / remotely controlled

Data outputEthernet

Power 12-24V, 5WControl of external device

Page 4: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

IR Source

Absorption in water less than 1m – no interference with PMTs on other lines

~60 LED 850nm

Can be controlled (switched ON/OFF) by camera

Page 5: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Mechanics @ CPPM

Test setup for water testsFinal mechanics frame to hold cameraAnd IR source (not yet mounted)

Page 6: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Mounting on OMF (floor 5)Try to maximize overlap of field of view between camera and OM

Page 7: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Electronics from CPPM

CAMETH CAMPOW

Conversion of Ethernet signalsFrom electric to optic

Power supply and IR control

Page 8: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Combined tests with ISIT

ISIT IR AXIS

ISIT : intensified silicon intensifier tubeUniversity Aberdeen 1995, 20,000 EuroClaimed sensitivity ~ 10-6 lux

Bacteria sample

Page 9: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Combined tests with ISIT

Bacteria sample

AXIS

AXIS, IR ON

ISIT

Page 10: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Tests with OM

Camera and IR source850 nm

Box for laser calibration

OM with PMT

Image taken with PMT HV onAnd IR onCounting rate PMT ~ 10 Mhz Second IR source 940nmTo avoid interference with PMTs

Page 11: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Test with laser

laser

OMSplitter16x

Diffuser

Geometrical factor 0.1

Cameralens

100-1000 Hz

Integration variable

1cm2

Page 12: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Test with laserAXIS 1sec AXIS 1/25sec ISIT 1/25 sec

3.10-5 lux

3.10-6 lux

ISIT ~ factor 20 more sensitive ; AXIS better resolutionMissing sensitivity can be compensated by longer exposure timeWorst case scenario : isotropic light (as from K40)PMT 1MHz = 108 photons/m2/sec = 3 10-8 luxExpect to see pointlike signals at few MHz depending on geometry

Page 13: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Deployment July 2007

Floor 5Floor 1

ADCP Camera

OM

ADCP

Camera

OM

Page 14: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Connection Dec 2007Floor 5Floor 1

ADCPCameraIR flash

OMOM Camera

Page 15: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.
Page 16: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Data taking cameras

– Connected to Windows machine antbiocamdaq (IMP)– Run in self triggering mode (motion detection)– IR flash activated when triggered– Camera floor1 : large “excluded areas” to avoid self

triggering– Data saved on local disk– Triggered images manually copied to CPPM– Exposure time lowered from initially 2 secs to now 0.2

secs– Motion detection trigger tuned to maximize sensitivity

Page 17: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Data taking cameras– Manual triggers possible via web interface by switching ON IR

flash for few secs– Manual triggers are recorded (exmaple below)

– 2008-01-02 19:47:05 +0100 "IR floor 1 manual"– 2008-01-06 22:19:04 +0100 "IR floor 1 manual"– 2008-01-06 22:21:07 +0100 "IR floor 1 manual"– 2008-01-10 21:06:56 +0100 "IR floor 1 manual"– 2008-01-10 21:21:36 +0100 "IR floor 1 manual"– 2008-01-14 19:13:21 +0100 "IR floor 1 manual"– 2008-01-14 19:13:52 +0100 "IR floor 1 manual"– 2008-01-14 22:10:24 +0100 "IR floor 1 manual“

– First result : IR light totally invisible to PMTs (orientation, water absorption ?) for both wave lengths

– Alternative DAQ mode • always active (store all images)• IR always ON

– Useful to study currents, “snow” density

Page 18: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Data taking OMs & ADCPs

– Independent run control with customized clock, dfilter, dwriter

– Acou-clock provided by Max Neff to avoid interference with main run control

• (counter measure for clock broadcast commands)

– Data saved at Lyon as for normal runs• Only SummaryTimeslices written• Only ARS 0 read• 13msec Frametime • 20 hour runs : ~70 Mbytes per run

– Online monitoring : only 1 ratemon

Page 19: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Run Control

All processes can run on a single machine (currently pollux)

Page 20: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Examples of bursts

Page 21: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.
Page 22: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.
Page 23: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Time distribution camera triggers

15 triggers from floor 51 trigger from floor 1No striking correlation with burst fraction

Page 24: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Examples

2008-01-14 floor1 2007-12-30 floor5

Page 25: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Examples

2007-12-24 floor5 2008-01-19 floor5

OM floor 5 not anymore operationalUnder investigation

Page 26: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Examples

2007-12-10 floor5

Page 27: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Status

• Both cameras + IR flashes work well

• Lost 1 OM

• IR 940nm to far infrared to be useful

• Self triggering of cameras works fine

• Independent running with OMs works fine

• Sensitivity sufficient to see bioluminescent events

Page 28: First results from the Biocams J. Brunner. Cameras on floor 1 and floor 5 together with an OM and an ADCP Floor 1 –80m above sea floor Floor 5 –270m above.

Future

• Continue data taking in self trigger mode• Develop external trigger (from OMs)• Improve self trigger for floor 1

– (trigger dead time, help needed from AXIS)• Try to resurrect OM floor 5• Analyze camera events (help needed)• Analyze L0 count rates (help needed)

– Burst shapes– Total charge seen by PMTs

• Possible data taking periods with light ON – to study sea currents– oscillations of lines– snow density


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