MULTIOMYX™ AND VECTRA® POLARIS™ PLATFORMS
MULTIPLEXEDIMMUNOFLUORESCENCE
Cancer-related tests per year
Biomarker projects in development &
testing to date
Completed projects with a backlog of
more than $145MM
In breast cancer testing* in PD-L1
Testing
MDs & PhDs across pathology & scientific
disciplines
>2000
>120 620+~1,000,000
>1500#1 #1*Data from CMS claims database
Oncology & pathology tests ready for order
OUR MISSION IS TO HELP
REDUCE CANCER DEATHSACROSS THE GLOBE.
Because every sixth death in the world is due to cancer, our mission
at NeoGenomics is to partner with pharmaceutical companies to bring
new life-saving oncology drugs to market so we can help reduce
cancer-related deaths worldwide.
2 3
Our unique and comprehensive product and service offerings include:
NeoGenomics’ Pharma Services offer two multiplex immunofluorescence platforms: MultiOmyx™ and Vectra® Polaris™.
• Unparalleled expertise, flexibility and scalability • Largest oncology focused clinical research organization (CRO) in the USA• Complete one-stop testing• Medical and scientific consultation
NEOGENOMICS PHARMA SERVICES
• MultiOmyx is a proprietary, high-order multiplexing methodology that enables visualization and characterization of up to 60 proteins in a single FFPE tissue section.
• Vectra Polaris is an automated system that allows simultaneous detection of 2-6 different markers from a single FFPE tissue slide which would provide a streamlined workflow for implementing refined low-order multiplex panel sets.
Utilizing deep learning and advanced cell classification algorithms, multiplexedimmunofluorescence spatial analysis uncovers the complex interplay betweenmultitudes of immuno-oncology biomarkers, and provides complete analysisof the tumor microenvironment.
Multiplex immunofluorescence has emerged as an effective and proficient approach to simultaneously identify specific proteins and immune cell types, to determine the spatial distribution and activation state of immune cells, as well as the expression of immune modulators, all at the same time. This method is highly beneficial for exploring immune evasion mechanisms and finding potential biomarkers that allow researchers to assess the mechanism of action and predict and monitor drug response.
MULTIPLEXED IMMUNOFLUORESCENCE: A COMPLETE VIEW OF TUMOR BEHAVIOR
MultiOmyx™ Vectra® Polaris™
High order ≥ 7plex Low order 2-6plex
Comprehensive analysis of tumor biology High-throughput & faster TAT
Deep & precise immuno-profiling Assay transfer & validation
4 5
MultiOmyx enables visualization and characterization of up to 60 proteins in a single formalin fixed, paraffin embedded (FFPE) 4μm tissue section. Slides are prepared and stained using MultiOmyx multiplexing IF staining protocol. For each round of staining, conjugated fluorescent antibodies are applied to the slide, followed by image acquisition of stained slides. The dye is erased, enabling a subsequent round of staining with another pair of fluorescent antibodies.
MULTIOMYX:
PROPRIETARY, HIGH-ORDERMULTIPLEXING METHODOLOGY
MultiOmyx also offers:
• Unambiguous immune cell co-expression and co-localization• Advanced quantitative cellular classification• Medical, scientific, & bioinformatics consultation• Custom assay design & verification• Advanced image analysis & visualization tools• Spatial analytics• Integrated with FISH, RNAScope, and NGS• High order: >= 7-plex• Comprehensive analysis of tumor biology• Monitoring of the immune microenvironment for the characterization
of tumors pre- and post- I/O treatment • Comprehensive Immunophenotyping at single cell level from one
FFPE slide
BIOMARKERS BIOMARKERS (CONT.)
A20/TNFAIP3
Aiolos
alpha-SMA
AXL
Arginase I
B7-H3/CD276
CD138
B7-H4/VTCN-1
CD141
CA9/CAIX
CD14
c-Caspase 3
CD15
CCR7
CD155/PVR
CD11b
CD16
CD137/4-1BB
CD22
CD209/DC-SIGN
CD103
CD19
CD206CD11C
CD163
CD25/IL2-R
CD226
CD123
CD20
CD208/DC-LAMP
MULTIOMYX™
ANTIBODY LIST
CD299
CD3
CD31
CD33
CD32B
CD34
CD38
CD4
CD45
CD45RO
CD45RA
CD66b
CD56
CD47
CD64
CD68
CD69
CD8
CD83
CD86
CD9
CK-OSCAR
cMet
CK-20
Claudin 6
CK-19
CK-PCK26
CK-AE1
Clec9A
6 7
BIOMARKERS BIOMARKERS (CONT.)
MGMT
MMP-9
MUC1
NY-ESO-1
NaKATPase
Olig2
PNAd
Osteopontin
pSMAD3
OX40/CD134
pSTAT3
OX40L/CD252
S100
p53
SOX-10
PAX5
STING
Perforin
TIGIT
PD-L1
TCF1/TCF7
TTF1
PD-1
SYNDECAN-1/CD138
TIM3
PD-L2/CD273
TGFb1
Vimentin
MULTIOMYX™
ANTIBODIES LIST (CONT.)
Juncker-Jensen A. et al. (2019, April). Pro-Tumorigenic Mechanisms of M2 Tumor-Associated Macrophages in Triple-Negative Breast Cancer. Poster presented at AACR Annual Meeting, Chicago, IL.
Au Q. et al. (2019, April). Characterization of TIGIT Expression Using MultiOmyx™ Hyperplexed Immunofluorescence Assay in NSCLC and melanoma. Poster presented at AACR Annual Meeting, Atlanta, GA.
Juncker-Jensen A. et al. (2019, October). An Integrated Multiplexing Approach for the Immunoprofiling of the Tumor Microenvironment of Ovarian Granulosa Cell Tumors. Poster presented at AACR-NCI-EORTC Annual Meeting, Boston, MA.
PanCK+ CD3+ CD34+ Ki67+
SOX10+ TIGIT+ LAG3+ PD1+
M1 TAM
M2 TAM
S100+ CD68+ HLADR+ CD163+
Collagen I
Collagen IV
CSF-1R
CXCR2
CTLA-4
CXCR4
E-CAD
EGFR
EMA/MUC1
FOXP3
GFAP
Hepatocyte/HepPar1
Glypican-3
GITR
Granzyme B
HHLA2
HLA-ABC
HLA-DR
HSV-1
ICOS
ICOS-L/CD275
Ikaros
LAG3/CD223
IDO-1
IRAK4
IDH1 R132H
iNOS
Mesothelin
IGF1R
Ki67
8 9
BIOMARKERBIOMARKER CO-EXPRESSIONCO-EXPRESSION PHENOTYPESPHENOTYPES
CD3 CD3T helper T helperCD3+CD4+ CD3+CD4+
CD4 CD4T regulatory T regulatoryCD3+CD4+FoxP3+ CD3+CD4+FoxP3+
CD8CD8
Memory T helperCD3+CD4+CD45RO+ CD3+CD4+PD1+
CD3+CD4+TIM3+ T helper TIM-3Immune modulation
Immune modulation
Immune modulation
T cytotoxic TIM-3
CD3+CD4+PD1+
CD3+CD4+CTLA4+
T cytotoxic
T cytotoxic
CD3+CD8+
CD3+CD8+
Memory T cytotoxic
B cell
CD3+CD8+CD45RO+
CD3+CD8+PD1+
CD3+CD8+TIM3+
Immune modulationCD3+CD8+PD1+
Macrophage
Granulocyte
CD68+
CD11b+CD15+Macrophage PD-L1
TAM
CD68+PDL1+
CD68+B cellCD20+
CD20+
CD68+TIM3+ Macrophage TIM3
B cell PD-L1 M2 TAMCD20+PDL1+ CD68+CD163+
Tumor cell PD-L1 Proliferating tumorPanCK+PDL1+ PanCK+Ki67+
Natural Killer cell Macrophage PD-L1
Tumor cell PD-L1
CD3-CD56+ CD68+PDL1+
PanCK+PDL1+
CD45RO
FoxP3
FoxP3
CD20CD20
CD68CD68
CD56
CD11bCTLA-4
CD15
PD-1
PD-1
PD-L1
PD-L1 LAG-3
Ki67
PanCKOX40
PanCK
IMMUNE PANEL (TIL): TIL AND MYELOID PANEL:12 MARKERS 16 MARKERS
Juncker-Jensen A. et al. (2019, December). PD-1 and LAG-3 synergize to drive tumor-infiltration of T cytotoxic cells in NSCLC tumors. Poster presented at ESMO I/O Annual Meeting, Geneva, Switzerland.
Au Q. et al. (2016, April). MultiOmyxTM multiplexed tumor infiltrating lymphocyte panel provides comprehensive immunophenotyping from a single FFPE slide. Poster presented at AACR Annual Meeting, New Orleans, LA.
PanCK+ CD8+ PD-L1+ CD68+ FoxP3+
PanCK+ LAG-3+ PD-1+ CD8+
10 11
SOFTWARE FOR MULTIOMYXWHOLE SLIDE SCANNING
VECTRA® POLARIS™:NEOVUE™
IMAGE AND DATA HIGH THROUGHPUTVISUALIZATION
IMAGE VISUALIZATION
DATA VISUALIZATION
AUTOMATED MULTISPECTRAL
With the NeoVUE image and data visualization software the MultiOmyx end-user can rapidly view and manage the multiplexed images as well as the comprehensive biomarker profiling on a single-cell level.
Vectra Polaris is a fully-enclosed instrument with touchless slide automation that allows simultaneous detection of 2-6 different markers from a single FFPE tissue slide—providing a streamlined staining, imaging and analysis workflow for implementing refined low-order multiplex panel sets.
• Whole slide multispectral images at high throughput with up to 6 markers• Assay transfer and validation• Continuous slide loading workflows (80+ slides)• 6-8 slides per hour for 20x FL whole slide scan• High signal:noise ratio• Analysis: - InForm: spectrally unmixing images - Halo or VisioPharm: tissue seg, cell seg, phenotyping, scoring, spatial distribution analysis, pathology views
• Use any validated antibody panel• Fluorophore is covalently bonded to tissue• Antibodies are efficiently stripped between
staining rounds
How opal staining works:
VECTRA POLARIS OFFERS:
12 13
INDICA HALO®
VISIOPHARM
• User-friendly UI & Custom Development Workflow
• Library of pre-configured modules available
• HaloLink allows slide review and direct annotation by pathologists
• Better fit for clinical trials because of the nature of the quality/ regulatory requirements
• Marketing partnership with NeoGenomics
• Generates results very quickly for common tasks/simple analytics/ single-plex
• Library of prebuilt apps available
• Powerful tool set, optimal for more complex and custom analytics requirements
• Can define non-cell objects in the tissue
• AI packages that can be used for cell classification to increase accuracy• Clinical trial testing is feasible but requires more time and effort
• AI-based framework proprietary to NeoGenomics
• Optimized for MultiOmyx
• Highly customizable with complete control to accommodate new requirements
• Adapted for IHC/CISH/dual IHC
• NeoVUE compatible
• RUO (software not validated to FDA standards)
NEO IMAGE ANALYSIS
PLATFORM INDICA HALO VISIOPHARM NEO IA
Currently SupportingClinical Studies (retro)
Clinical Studies (enrollment)
Low order mIF, 2-6-plex (Polaris)
Complexity of analytics tasks
High-plex mIF, ≥7 (MO)
Direct annotation & slide review
+++ ++
N/A++ +
+++
+++
+
+++
++
++
+++
N/A
+++ +++
N/A
N/A
+++
DATA IMAGE ANALYSIS
14 15
NEO AI
CHARACTERIZATION OFMARKERS & PHENOTYPES
NEAREST NEIGHBOR ANALYSIS
Phenotype BPhenotype A
1.6
Lung1
Lung2
Lung3
Lung4
Lung5
Lung6
Lung7
Lung8
Lung9
Melanoma1
Melanoma2
Melanoma3
Melanoma4
Melanoma5
Melanoma6
Melanoma7
Melanoma8
CD
3 +
CD
4 +
CD
3 +
CD
8 +
TIG
IT +
CD
4 +
TIG
IT +
CD
8 +
TIG
IT +
CD
4 +
FOXP
3 +
TIG
IT +
CD
4 +
FOXP
3 -
TIG
IT +
CD
45RO
+ C
D4
+
TIG
IT +
CD
45RO
+ C
D8
+
TIG
IT +
CD
56 +
TIG
IT +
PD
1 +
TIG
IT +
LAG
3 +
TIG
IT +
TIM
3 +
TIG
IT +
PD
1 +
LAG
3 +
TIG
IT +
PD
1 +
TIM
3 +
TIG
IT +
PD
1 +
TIM
3 +
LAG
3 +
TIG
IT +
PD
1 +
CD
4 +
TIG
IT +
PD
1 +
CD
8 +
TIG
IT +
PD
1 +
CD
4 +
FOXP
3
#per mmsq
0.8
0.0
-0.8
-1.6
TIGIT+CD4+FOXP3- TO TUMOR
TIGIT+CD4+FOXP3+ TO TUMOR
# of
cel
ls
Average distance of 5 nearest “B” neighbors to “A”
5 Nearest Neighbor Analysis
1000
2000
3000
4000
5000
6000
10 20 30 40 50 60 70
0
5000
10000
15000
20000
25000
10 20 30 40 50 60 70
16 17
QUANTIFICATION FOR
LOW-PLEX MULTIPLEXEDIF BY HALO
PD-L1+
CD8 INTENSITY HISTOGRAM
SPATIAL PLOT: CD8+ T CELLS TO PDL1+ CD68+ CELLS
CD8 (Opal 620) Positive = ‘1’ Phenotype 2 = ‘1’
CD68+ PD-L1+
18 5
& LAB LOCATIONS
OUR GLOBAL HEADQUARTERS
1
5
7
6
2
3
4
1
2
3 4
5
7
6
ALISO VIEJO (ORANGE COUNTY), CA
GENEVA, SWITZERLAND
CHINA
SINGAPOREHOUSTON, TX
FT. MYERS, FL
LA JOLLA, CA
Anatomic Pathology, Molecular, Multiplexed IF, Flow Cytometry, FISH & Cytogenetics
Anatomic Pathology, Molecular*, Flow Cytometry, Immunoassays, FISH & Cytogenetics
Anatomic Pathology*, Molecular*, Flow Cytometry*, Immunoassays*, FISH & Cytogenetics*
Anatomic Pathology, Flow Cytometry, Molecular* FISH & CytogeneticsAnatomic Pathology, Molecular, Immunoassays, FISH & Cytogenetics
Anatomic Pathology, FISH & Cytogenetics
Molecular, FISH & Cytogenetics
* Through Collaborations
19
NeoGenomics is a premier cancer diagnostics and pharma services company that provides innovative diagnostic, prognostic and predictive testing with uncompromising quality, exceptional service and innovative solutions—all to help save lives byimproving patient care.
2131 Faraday Ave.Carlsbad, CA 92008United States
Phone: 760.268.6200Fax: 760.268.6201
TO SEE HOW WE CAN COLLABORATE
NEOGENOMICS LABORATORIES
CONTACT US
NeoGenomics Laboratories is a specialized oncology reference laboratory providing the latest technologies, testing, partnership opportunities, and interactive education to the oncology and pathology communities. We offer the complete spectrum of diagnostic services in molecular testing, FISH, cytogenetics, flow cytometry, and immunohistochemistry through our nation-wide network of CAP-accredited, CLIA-certified laboratories. Committed to research as the means to improve patient care, we provide Pharma Services for pharmaceutical companies, in vitro diagnostic manufacturers, and academic scientist-clinicians. We promote joint publications with our client physicians. NeoGenomics welcomes your inquiries for collaborations. Please contact us for more information.
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