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In Vivo Two-Photon Voltage Imaging with Sulfonated Rhodamine Dyes Rishikesh U. Kulkarni, Matthieu Vandenberghe, ,# Martin Thunemann, Feroz James, Ole A. Andreassen, # Srdjan Djurovic, #,Anna Devor, ,,and Evan W. Miller* ,,§,|| Department of Chemistry, § Department of Molecular and Cell Biology, and || Helen Wills Neuroscience Institute, University of California, Berkeley, California 94720, United States Department of Neurosciences and Department of Radiology, University of California, San Diego, California 92093, United States # NORMENT KG Jebsen Centre for Psychosis Research, Division of Mental Health and Addiction, Oslo University Hospital and University of Oslo and Department of Medical Genetics, Oslo University Hospital, 0407 Oslo, Norway Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129, United States * S Supporting Information ABSTRACT: Optical methods that rely on uorescence for mapping changes in neuronal membrane potential in the brains of awake animals provide a powerful way to interrogate the activity of neurons that underlie neural computations ranging from sensation and perception to learning and memory. To achieve this goal, uorescent indicators should be bright, highly sensitive to small changes in membrane potential, nontoxic, and excitable with infrared light. We report a new class of uorescent, voltage-sensitive dyes: sulfonated rhodamine voltage reporters (sRhoVR), synthetic uorophores with high voltage sensitivity, excellent two- photon performance, and compatibility in intact mouse brains. sRhoVR dyes are based on a tetramethyl rhodamine uorophore coupled to a phenylenevinylene molecular wire/diethyl aniline voltage-sensitive domain. When applied to cells, sRhoVR dyes localize to the plasma membrane and respond to membrane depolarization with a uorescence increase. The best of the new dyes, sRhoVR 1, displays a 44% ΔF/F increase in uorescence per 100 mV change, emits at 570 nm, and possesses excellent two-photon absorption of approximately 200 GM at 840 nm. sRhoVR 1 can detect action potentials in cultured rat hippocampal neurons under both single- and two-photon illumination with sucient speed and sensitivity to report on action potentials in single trials, without perturbing underlying physiology or membrane properties. The combination of speed, sensitivity, and brightness under two-photon illumination makes sRhoVR 1 a promising candidate for in vivo imaging in intact brains. We show sRhoVR powerfully complements electrode-based modes of neuronal activity recording in the mouse brain by recording neuronal transmembrane potentials from the neuropil of layer 2/3 of the mouse barrel cortex in concert with extracellularly recorded local eld potentials (LFPs). sRhoVR imaging reveals robust depolarization in response to whisker stimulation; concurrent electrode recordings reveal negative deections in the LFP recording, consistent with the canonical thalamocortical response. Importantly, sRhoVR 1 can be applied in mice with chronic optical windows, presaging its utility in dissecting and resolving voltage dynamics using two-photon functional imaging in awake, behaving animals. INTRODUCTION Emergent brain properties arise from the coordinated ring of neurons. The ux of ions into and out of these specialized cells give rise to changes in transmembrane potentials. Intracellular electrophysiological recordings provide the most accurate determination of membrane potential in single neurons, oering resolution of large action potential spikes or even synaptic currents, but are dicult to implement for more than one neuron for measurements of circuit activity in vivo. 1 A partial solution to the problem of recording from large numbers of neurons intracellularly is to record the ensemble extracellular potentials neuronal populations. 2 These extra- cellular electrical signals, reecting contributions from multiple neurons, have the advantage that they can be readily obtained in vivo, and modern fabrication methods enable massively multiplexed recordings. 3,4 The slow component of the extracellularly recorded signals, local eld potentials, or local eld potentials (LFPs) provides an integration of the synaptic events of large numbers of neurons, enabling high density recordings across a variety of species for use in understanding fundamental neurobiology Received: July 3, 2018 Published: October 8, 2018 Research Article http://pubs.acs.org/journal/acscii Cite This: ACS Cent. Sci. 2018, 4, 1371-1378 © 2018 American Chemical Society 1371 DOI: 10.1021/acscentsci.8b00422 ACS Cent. Sci. 2018, 4, 13711378 This is an open access article published under an ACS AuthorChoice License, which permits copying and redistribution of the article or any adaptations for non-commercial purposes. Downloaded via UNIV OF OSLO on February 27, 2019 at 10:38:04 (UTC). See https://pubs.acs.org/sharingguidelines for options on how to legitimately share published articles.
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In Vivo Two-Photon Voltage Imaging with Sulfonated RhodamineDyesRishikesh U. Kulkarni,† Matthieu Vandenberghe,⊥,# Martin Thunemann,∇ Feroz James,†

Ole A. Andreassen,# Srdjan Djurovic,#,○ Anna Devor,⊥,∇,‡ and Evan W. Miller*,†,§,||

†Department of Chemistry, §Department of Molecular and Cell Biology, and ||Helen Wills Neuroscience Institute, University ofCalifornia, Berkeley, California 94720, United States⊥Department of Neurosciences and ∇Department of Radiology, University of California, San Diego, California 92093, United States#NORMENT − KG Jebsen Centre for Psychosis Research, Division of Mental Health and Addiction, Oslo University Hospital andUniversity of Oslo and ○Department of Medical Genetics, Oslo University Hospital, 0407 Oslo, Norway‡Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, Massachusetts 02129, United States

*S Supporting Information

ABSTRACT: Optical methods that rely on fluorescence formapping changes in neuronal membrane potential in thebrains of awake animals provide a powerful way to interrogatethe activity of neurons that underlie neural computationsranging from sensation and perception to learning andmemory. To achieve this goal, fluorescent indicators shouldbe bright, highly sensitive to small changes in membranepotential, nontoxic, and excitable with infrared light. Wereport a new class of fluorescent, voltage-sensitive dyes:sulfonated rhodamine voltage reporters (sRhoVR), syntheticfluorophores with high voltage sensitivity, excellent two-photon performance, and compatibility in intact mouse brains.sRhoVR dyes are based on a tetramethyl rhodaminefluorophore coupled to a phenylenevinylene molecular wire/diethyl aniline voltage-sensitive domain. When applied to cells,sRhoVR dyes localize to the plasma membrane and respond to membrane depolarization with a fluorescence increase. The bestof the new dyes, sRhoVR 1, displays a 44% ΔF/F increase in fluorescence per 100 mV change, emits at 570 nm, and possessesexcellent two-photon absorption of approximately 200 GM at 840 nm. sRhoVR 1 can detect action potentials in cultured rathippocampal neurons under both single- and two-photon illumination with sufficient speed and sensitivity to report on actionpotentials in single trials, without perturbing underlying physiology or membrane properties. The combination of speed,sensitivity, and brightness under two-photon illumination makes sRhoVR 1 a promising candidate for in vivo imaging in intactbrains. We show sRhoVR powerfully complements electrode-based modes of neuronal activity recording in the mouse brain byrecording neuronal transmembrane potentials from the neuropil of layer 2/3 of the mouse barrel cortex in concert withextracellularly recorded local field potentials (LFPs). sRhoVR imaging reveals robust depolarization in response to whiskerstimulation; concurrent electrode recordings reveal negative deflections in the LFP recording, consistent with the canonicalthalamocortical response. Importantly, sRhoVR 1 can be applied in mice with chronic optical windows, presaging its utility indissecting and resolving voltage dynamics using two-photon functional imaging in awake, behaving animals.

■ INTRODUCTION

Emergent brain properties arise from the coordinated firing ofneurons. The flux of ions into and out of these specialized cellsgive rise to changes in transmembrane potentials. Intracellularelectrophysiological recordings provide the most accuratedetermination of membrane potential in single neurons,offering resolution of large action potential spikes or evensynaptic currents, but are difficult to implement for more thanone neuron for measurements of circuit activity in vivo.1 Apartial solution to the problem of recording from largenumbers of neurons intracellularly is to record the ensembleextracellular potentials neuronal populations.2 These extra-

cellular electrical signals, reflecting contributions from multipleneurons, have the advantage that they can be readily obtainedin vivo, and modern fabrication methods enable massivelymultiplexed recordings.3,4

The slow component of the extracellularly recorded signals,local field potentials, or local field potentials (LFPs) providesan integration of the synaptic events of large numbers ofneurons, enabling high density recordings across a variety ofspecies for use in understanding fundamental neurobiology

Received: July 3, 2018Published: October 8, 2018

Research Article

http://pubs.acs.org/journal/acsciiCite This: ACS Cent. Sci. 2018, 4, 1371−1378

© 2018 American Chemical Society 1371 DOI: 10.1021/acscentsci.8b00422ACS Cent. Sci. 2018, 4, 1371−1378

This is an open access article published under an ACS AuthorChoice License, which permitscopying and redistribution of the article or any adaptations for non-commercial purposes.

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and driving brain-machine interfaces. Despite the utility of LFPrecordings for measuring ensemble neuronal activity in diversebrain contexts, they suffer from ambiguity in interpretation ofthe underlying membrane potential dynamics. For example,excitatory inputs and depolarization close to the brain surfaceproduce the same LFP signature as inhibitory inputs andhyperpolarization in deep cortical layers.5 Resolving thisambiguity requires prior knowledge of underlying neuronalarchitecture and physiology, complementary functional imag-ing approaches, and/or intricate computational models.5

Further, LFP signals from the cerebral cortex of the brainlack a true depth resolution, because a signal recorded from thesurface can arise due to synaptic inputs to the deep layers andvice versa.5

Fluorescence imaging of neuronal activity offers a promisingstrategy for complementing LFP recordings to resolve thesecritical ambiguities. LFP recordings have been combined withactivity imaging using both small molecule6,7 and geneticallyencoded8,9 Ca2+ indicators as well as small molecule10,11 andgenetically encoded voltage indicators.12 Voltage imaging withvoltage-sensitive fluorescent indicators provides a directreadout of the local transmembrane potential and an importantcomplement for interpreting the extracellular potential record-ings of LFPs. However, most studies employ single-photonexcitation coupled with widefield, epifluorescence imaging insuperficial cortical brain areas. This type of imaging results indepth-averaged voltage signals that lack the depth resolutionrequired to calibrate the interpretation of LFP.10−14 Addition-ally, the use of powerful electrochromic voltage-sensitive dyeslike the popular RH-1691 or RH-169215−17 compoundsrequires off-peak excitation and emission, resulting inapproximately 99% photon loss compared to on-peak dyeexcitation and emission.18 A recent study employed agenetically encoded voltage indicator targeted to definedcells, coupled with single-photon fiber photometry, to opticallymeasure transmembrane potential in concert with electro-physiological field recordings.19 By constraining indicatorexpression to specific cells, some depth resolution could beachieved, even in the absence of an imaging approach. Weenvisioned that two-photon imaging with untargeted voltagesensitive dyes would offer a more generalizable approach todirectly record changes in transmembrane potential, withoutthe need for transgenic animals or cellular resolution. Incontrast to single-photon excitation, two-photon excitationoffers optical sectioning due to a sharp fall of fluorescenceintensity with distance from the focal plane. Therefore, toachieve the full potential of voltage imaging, especially in thecontext of existing technologies for recording extracellularpotentials of large populations of neurons, requires indicatorsthat are bright, excellent two-photon absorbers, highly voltagesensitive, and efficient with excitation and emission photons.To address these challenges, we recently initiated a program

to develop voltage-sensitive fluorescent indicators withsufficient speed, sensitivity, and brightness to monitor rapidchanges in membrane potential. Our strategy relies on the useof photoinduced electron transfer, or PeT, as a voltage-sensitive trigger. Voltage-sensitive fluorophores, which wegenerically refer to as VoltageFluors or VF dyes, are designedto partition into the outer leaflet of the plasma membrane.Their fluorescence is diminished when cells are hyperpolarized.Correspondingly, when cells depolarize, VF fluorescencebrightens. We hypothesize this is a result of the changingtransmembrane electrochemical potential altering the rate of

PeT and therefore modulating fluorescence.20,21 Consistentwith this hypothesis, VF dyes display rapid response kinetics,enabling them to detect action potentials in single-trial opticalrecordings, possess sensitivities of up to 63% ΔF/F per 100mV,22 can be tuned across a range of wavelength spanning thecolor palette from blue to far-red,23−26 and can operate usingtwo-photon illumination.24

A recent VF dye based on a rhodol chromophore,RhodolVoltageFluor-5, or RVF5, made use of a chlorinated,pyrrolidine-based rhodol. RVF5 possessed good photostabilityand moderate voltage sensitivity (28% ΔF/F per 100 mV),enabling detection of action potentials in cultured hippocampalneurons under conventional wide-field illumination andspiking events in mouse brain slices using two-photonillumination.24 Building on this result, we wondered whetherwe could access VF dyes that made use of fluorophores witheven higher two-photon absorption cross sections and evenlonger wavelength emission for use in in vivo applications(Scheme 1). In this regard, rhodamine dyes, with symmetrical

nitrogen substitution at the 3′ and 6′ positions of the xanthenechromophore, present themselves as an ideal choice becausethey have large two-photon absorption cross sections (σTPA),emission profiles bathochromically separated from typicalfluoresceins and rhodols, and good photostability. We recentlydisclosed the synthesis of the Rhodamine Voltage Reporter(RhoVR) family of tetramethylrhodamine (TMR)-basedvoltage sensors, which incorporate an ortho-carboxamidegroup to prevent spirocyclization of the rhodamine fluo-rophore and ensure localization of RhoVRs to the outer leafletof the plasma membrane.25 The best of these dyes, RhoVR 1,shows improved sensitivity (47% ΔF/F per 100 mV) and red-shifted excitation and emission relative to RVF5,24 but haslower solubility and requires several synthetic steps aftergeneration of the key fluorophore-molecular wire scaffold.25

We hypothesized that a sulfonated version of RhoVR wouldretain the essential characteristics of the carboxamide dye, butwith improved solubility and fewer overall synthetic steps(Scheme 1). We now disclose the design, synthesis, character-ization, and application of sulfonated Rhodamine VoltageReporters, or sRhoVRs (Scheme 1). This study is enabled by anew synthetic route to ortho-sulfonated rhodamine dyes that

Scheme 1. Molecular Redesign Enables in Vivo VoltageImaging with Sulfonated Rhodamine Voltage Reporters(sRhoVRs)

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provides regioisomerically pure sulfonated rhodamines in goodyields and in just three steps from readily available startingmaterials. The best of the new indicators, sRhoVR 1, featuresgood voltage sensitivity in HEK cells (44% ΔF/F per 100 mV),possesses a large σTPA (>200 GM at 840 nm), can detect actionpotentials in rat neurons in a single trial under widefield,confocal, and two-photon microscopy, and can be employed invivo in both anesthetized and awake mice to report on theevolution of voltage changes during sensory stimulation.

■ RESULTSDesign and Synthesis of sRhoVR Dyes. Preparation of

sRhoVR dyes can be achieved through a Pd-catalyzed Heckcoupling reaction between halogenated, sulfonated rhodamines(5 or 6) and substituted styrenes. We accessed sulfonatedrhodamines dyes27 from readily prepared 4-bromo-2-sulfoben-zaldehyde22 (3) and a novel 5-bromo-2-sulfobenzaldehyde (4).Both 3 and 4 could be generated in quantitative yield viareaction of bisulfite28 onto commercially available fluorinatedbromobenzaldehydes 1 and 2 (Scheme 2). The improved yieldfor 3, relative to our previously reported yield (63%)22 resultsfrom reducing the reaction temperature from 160 to 140 °Cand increasing the reaction time from 16 to 48 h. Sulfonatedbenzaldehydes 3 and 4 were condensed with 3-(dimethylamino)phenol to afford the sulfoTMR dyes 5(para-isomer) and 6 (meta-isomer) in 35% and 44% yield.Subsequent Pd-catalyzed Heck coupling with previouslyreported styrene molecular wires22 gave sRhoVR dyes (7−10) in isolated crude yields ranging from 52 to 62%.Compared to carboxamide-substituted RhoVR, which requires

six synthetic steps from commercially available startingmaterials,25 sRhoVR can be accessed in just three steps,representing a 50% reduction in step count. Small amounts ofthe sRhoVR molecules were purified via preparative HPLC forspectroscopic characterization. The use of sulfonated benzal-dehydes provides ready access to regioisomerically puresulfonated rhodamines and may be a general strategy forcreation of analogous, water-soluble xanthene dyes. TheSulfoTMR dyes 5 and 6, as well as the final sRhoVR dyes(7−10), demonstrate absorption maxima centered between548 and 553 nm (ε = 60 000 to 88 000 M−1 cm−1; Figure S1),similar to those of classic tetramethylrhodamine dyes. ThesRhoVR compounds also possess a strong secondaryabsorption band near 400 nm due to the presence of thephenylenevinylene molecular wires, with the para-sRhoVR (7,8; Figure S1) secondary band slightly red-shifted relative tothat of the meta-sRhoVRs (9, 10; Figure S1). Fluorescenceemission from all of the compounds was centered between 570and 574 nm (Φ = 0.24−0.57; Table S1).

Cellular Characterization and Performance ofsRhoVRs. Live-cell imaging reveals that sRhoVR dyes localizeto the plasma membrane of cells. Incubation of HEK cells withsRhoVR dyes (7−10) at a concentration of 200 nM results inclear membrane-localized fluorescence, as determined byconfocal laser scanning fluorescence microscopy (Figure 1A,Figure S2). The apparent membrane staining was brighter forthe meta-sRhoVR dyes (9 and 10) than for the para-sRhoVRdyes (7 and 8). The membrane staining of sRhoVR dyesindicates that the ortho-sulfonate is sufficient to preventinternalization of tetramethylrhodamine-based voltage indica-

Scheme 2. Synthesis of Sulfonated Rhodamine Voltage Reporters (sRhoVRs)

Figure 1. Characterization of SulfoRhoVR 1 (sRhoVR 1) in HEK Cells. (a) Confocal fluorescence image of sRhoVR 1 (10). Scale bar is 20 μm.(b) Plot of the percentage change in fluorescence vs membrane potential summarizing data from five separate cells, resulting in an average voltagesensitivity of 44% per 100 mV. Error bars are ± SEM. (c) Plot of fractional change in fluorescence vs time for 100 ms hyper- and depolarizing stepsfrom +100 mV to −100 mV in 20 mV increments from a holding potential of −60 mV for single HEK293T cells under whole-cell voltage-clampmode. (d) Two-photon cross section of sRhoVR 1 vs RhodolVoltageFluor 5 (RVF5), acquired in PBS, pH 7.4.

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tors. We assessed the voltage sensitivity of each sRhoVR dye inHEK cells using patch-clamp electrophysiology. Hyper- anddepolarizing steps from +100 to −100 mV in 20 mVincrements from a baseline potential of −60 mV revealed arange of voltage sensitivities from 3 to 44% for the sRhoVRdyes, depending on the combination of fluorophore (para 5 ormeta 6) and molecular wire (Table S1, Figure 1B,C, and FigureS3). The voltage sensitivities of sRhoVR compounds trackedwell with previously reported RhoVR counterparts,25 suggest-ing that the replacement of the carboxyl group associated withclassical rhodamines with a sulfonate group minimallyperturbed the electronic properties of the voltage reporters.Like we observed with the original RhoVR compounds,indicators25 with meta-substitution patterns (9 and 10) wereboth more voltage-sensitive and demonstrated higher signal-to-noise ratios (SNR) than their para-substituted counterparts.We are currently undertaking studies to probe the molecularmechanisms underlying this difference. One simple explanationis that for the meta-sRhoVRs, the alignment of the sulfonatewith the long axis of the molecular wire improves thealignment between the electron transfer vector and thetransmembrane electric field, which should enhance sensitiv-ity.22 Given its high sensitivity44% ΔF/F per 100 mV(compared to 25% for RVF5) and brightness in cells (FigureS2), we chose compound 10, which we call sRhoVR 1, forfurther characterization in subsequent experiments. Impor-tantly, for use in imaging in tissue and in vivo, the watersolubility of sRhoVR 1 (0.92 mM) was nearly 3-fold the

solubility of RVF5 (0.29 mM) and 5-fold greater than RhoVR1 (0.17 mM).

Neuronal Characterization of sRhoVR 1. Cultured rathippocampal neurons incubated with sRhoVR 1 (10, 500 nM)and imaged using confocal laser scanning fluorescencemicroscopy display clear membrane staining (Figure 2a). Rathippocampal neurons were subjected to whole-cell patch-clamp electrophysiology under current-clamp mode to recordspontaneous and evoked action potentials. Dual optical andelectrophysiological recording of spontaneous action potentialsdemonstrate that sRhoVR 1 exactly follows the electro-physiology recording (Figure 2b). We recorded evoked actionpotentials in hippocampal neurons under whole-cell currentclamp mode, in the presence or absence of sRhoVR 1 (500nM). The presence of sRhoVR 1 did not significantly alter thetime to peak, half-width, rise tau, rise time, or decay time of theaction potential, nor overall cell capacitance (n = 7 cells, 10spikes each), confirming that sRhoVR 1 does not perturbunderlying cellular physiology or membrane properties (FigureS4). Spontaneous activity recordings in cultured rat neuronsrevealed a SNR of 20:1 (n = 30 APs) with a ΔF/F of 5% perspike (Figure 2c). Cultured rat neurons were also subjected toexternal field stimulation and SNR for a single action potentialwas determined to be 11:1 (n = 50 APs) with a ΔF/F of 3%per spike (Figure 2d).

Two Photon Performance of sRhoVR in CulturedNeurons. We evaluated the ability of sRhoVR to monitormembrane potential changes under two-photon illumination.Two-photon absorption relies on the essentially simultaneous

Figure 2. Imaging evoked and spontaneous activity in neurons with sRhoVR 1. (a) Rat hippocampal neurons were stained with 200 nM sVR 1. Thescale bar is 20 μm. (b) Dual optical (red dots, 1 kHz sampling rate) and electrophysiological (black trace, 50 kHz sampling rate) recording ofspontaneous action potentials in rat hippocampal neurons. (c) Imaging of spontaneous activity in rat hippocampal neurons using sRhoVR 1. (d)Optical recording of action potentials evoked in rat hippocampal neurons by external field stimulation (5 Hz).

Figure 3. Two-photon voltage imaging of sRhoVR 1 in rat hippocampal neurons. (a) sRhoVR 1 brightly stains the plasma membrane of rathippocampal neurons under two-photon illumination. Scale bar is 50 μm for all images. (b) Zoomed version of boxed region in panel (a). (c) Stillframe from a video recording (200 Hz, 425 × 52 μm, 64 × 8 pixels) of the neurons from panel b. (d) Fluorescence responses demonstrate robustspontaneous activity. Fluorescence traces are single-trial ΔF/F values from single pixels, are unfiltered, and uncorrected for bleaching.

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absorption of two lower-energy photons to promote achromophore to a singlet excited state. Due to the use oflonger-wavelength light,29,30 two-photon microscopy enablesimaging in thick tissue samples such as brain slices and intactbrains. We showed previously that rhodol-based voltageindicators display voltage sensitivity in both traditionalsingle-photon and two-photon microscopy contexts.24 Rhod-amines have high two-photon absorption cross sections,29

suggesting that sRhoVR 1, with its large voltage sensitivity(44% ΔF/F per 100 mV) and yellow-orange emission profile(570 nm), would be a promising two-photon voltage indicator.We measured the two-photon absorption cross section (σTPA)of SulfoTMR dyes 5 and 6 (in ethanol) as well as sRhoVR 1and RVF5 (in PBS, pH 7.4) by normalizing to a rhodamine Bstandard.24,31 A plot of two-photon absorption cross-section vsexcitation wavelength reveals σTPA maxima of approximately210 GM (830−840 nm), which is in good agreement withliterature values for rhodamine B (a very similar fluorophore)in ethanol (204 GM at 830 nm)31 (Figure S5). By comparison,RVF5 displays an almost 2-fold lower value, 125 GM at itsmaximum of 820 nm (Figure 1d), and the previously reportedVF2.1.Cl has a much weaker 40 GM at its maximum of 780nm.24 Consistent with two-photon absorption, sRhoVR 1emission under two-photon illumination demonstrates aquadratic dependence on illumination intensity (Figure S6).With bright two-photon emission and high voltage

sensitivity, we expected that sRhoVR 1 could be used fortwo-photon voltage imaging in vivo. To lay the groundwork forthese studies, we assessed the ability of sRhoVR 1 to measureneuronal activity in cultured rat hippocampal neurons undertwo-photon illumination. Bath application of sRhoVR 1 (200nM) resulted in well-defined membrane staining (Figure 3a,b).In single-trial, single-pixel (6.6 μm2) optical recordings (Figure

3c), hippocampal neurons isolated from rat showed robustspontaneous activity that could be detected without posthocfiltering, averaging, or photobleach correction (Figure 3d). Toconfirm that the activity we observed was due to actionpotentials, we treated active cultures with tetrodotoxin (TTX,1 μM), to inhibit spontaneous action potential firing. In TTX-treated cultures, we did not observe spiking activity (FigureS7). Together these results establish that sRhoVR 1 can detectneuronal voltage changes under two-photon illumination.

In Vivo Imaging with sRhoVR 1. We next sought todeploy sRhoVR 1 for imaging voltage changes in the brains oflive mice. sRhoVR is a promising candidate for in vivo brainimaging because it possesses a nearly 2-fold larger two-photoncross section than RVF5, shows a 50% improvement in voltagesensitivity over RVF5 (44% vs 28%), an emission peak red-shifted by 35 nm, and 3−5-fold greater solubility compared toRVF5 and RhoVR 1. In particular, the ability to use two-photon illumination for voltage imaging allows the inter-rogation of voltage dynamics from neuronal membraneslocalized to a two-photon focal plane of approximately 2 μm.This is in contrast to classically employed widefield voltageimaging techniques as well as extracellular electrophysiologicalrecordings of local field potential (LFP) and multiunit activity(MUA). LFP reflects a current dipole that often extendshundreds of micrometers throughout a number of corticallayers,5,32 while MUA reflects spiking of many neurons within∼100 μm of the recording electrode tip.2 Therefore, use ofelectrodes alone cannot resolve differences in layer-specificactivity recorded by LFP. Similarly, pairing widefieldepifluorescence microscopy with electrode-based recordingcannot resolve layer-specific responses due to out-of-planefluorescence collected during epifluorescence microscopy. Weenvisioned two-photon imaging with sRhoVR 1 would be a

Figure 4. In vivo, two-photon voltage imaging in layer 2/3 of the barrel cortex of anesthetized mice using sRhoVR 1. (a) Schematic of in vivoimaging experimental setup. Cranial bone and dura mater were removed above the barrel cortex. The brain was covered with 0.7% agarose and ontop, a coverslip was placed in a way that allowed access to the brain from one side of the preparation. sRhoVR 1 (100 to 200 μM in ACSF) waspressure-injected through a glass or quartz micropipette; local field potentials (LFP) and multiunit activity (MUA) were recorded in close vicinityto the injection site with a tungsten electrode (impedance: 5−7 MΩ). (b) A view from the top on the cortical surface after intracortical injection ofsRhoVR 1 (red) and intravascular injection of fluorescein isothiocyanate-conjugated dextran (cyan); the sRhoVR 1-filled glass pipet (asterisk) andtungsten electrode (white arrowhead) are visible. Scale bar, 500 μm. (c, d) Typical two-photon images of tissue staining with sRhoVR 1 in corticallayer 2/3; the majority of cell bodies appeared dark indicating the lack of sRhoVR 1 in the intracellular compartment; arrowheads indicate a fewexceptions. The rectangle in (d) depicts a typical region of interest (ROI) for data acquisition (approximately 200 × 25 μm). Scale bars, 50 μm. (e)Time-course of sRhoVR 1 fluorescence, relative to baseline (ΔF/F), and LFP traces acquired simultaneously. Dotted red lines indicate timing ofcontralateral whisker pad stimulation with a single 300 μs weak electrical pulse. (f) Single trials (gray) and trial average (black) for sRhoVR1fluorescence, LFP, and MUA; eight trials from one ROI are overlaid. Dotted red lines indicate timing of contralateral whisker pad stimulation;asterisk in the MUA trace indicates artifact of electrical stimulation. For panels e and f sRhoVR 1 fluorescence was acquired in frame scan mode at afrequency of ∼20 Hz and normalized to mean fluorescence over the entire time course to obtain ΔF/F. All fluorescence time-courses are unfiltered,and uncorrected for bleaching.

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generalizable solution to this problem: bulk loading of sRhoVR1 would widely label cells in vivo, and optical sectioning withtwo-photon microscopy would enable depth resolution forcomplementing LFP recordings.We performed two-photon sRhoVR 1 imaging in layer 2/3

of the barrel cortex of anesthetized mice (Figure 4a). Pressureinjection of sRhoVR 1 through a glass pipet at ∼200 μm belowthe surface (Figure 4b, asterisk, 100−200 μM in ACSF)resulted in diffuse fluorescence staining across an areaapproximately 500 μm in diameter (Figure 4b, red is sRhoVR1 fluorescence, cyan is fluorescein isothio cyanate-conjugateddextran labeling of the vasculature). Typical staining patternsreveal comprehensive labeling of neuropil, with cell bodiesappearing as dark silhouettes (Figure 4c,d, Figure S8a). Ingeneral, the staining was uniform, although occasionally weobserved brighter cells, which are currently unidentified andmay be microglia (Figure 4c, arrowheads). RVF5 did notperform as well as sRhoVR: injection of rhodol-based voltageindicator RVF5 did not give staining over as large of an area,which may be partially explained by the lower solubility ofRVF5 relative to sRhoVR (0.29 mM vs 0.92 mM).Extracellular recordings of LFP and MUA were acquiredsimultaneously with two-photon imaging using a tungstenmicroelectrode inserted near the site of sRhoVR 1 injection(Figure 4b, white arrowhead). Optical recordings wereacquired under two-photon excitation from a region of interest(ROI) shaped as a horizontal strip approximately 200 × 25 μmin size (Figure 4d, black rectangle), at a framerate ofapproximately 20 Hz. Weak electrical stimulation of thecontralateral whisker pad in anesthetized mice resulted in clear,single-trial optical responses from sRhoVR 1(Figure 4e). Thefluorescence increase ranged from 4 to 10% ΔF/F, with asignal-to-noise ratio (SNR) of 5.9 ± 3.2 in single trials and11.6 after averaging 8 trials (Figure 4f). We observed very littlephotobleaching during the course of the experiments. Acomparison of bleach rates for sRhoVR and RVF5 under nearly

identically two-photon illumination conditions (31 mW forsRhoVR, 30 mW for RVF5) reveal no significant difference inbleach rates either in mouse cortext (Figure S8b) or incultured rat hippocampal neurons (Figure S8c). The timecourse of the externally recorded field potential (LFP, Figure4e,f) precisely matches the time course of the opticallymeasured transmembrane potential (sRhoVR 1, Figure 4e,f).The positive deflection in sRhoVR 1 fluorescence indicatesmembrane depolarization. Combined with the negativedeflections in the extracellularly recorded LFP, this confirmsexcitatory currents across neuronal membranes at a depth of200 μm, resulting in depolarization. Because the sign of theLFP can vary with the position of the electrode, two-photonimaging of transmembrane potential with sRhoVR 1 providesan crucial complement for interpreting the extracellularlyrecorded LFP.To further establish the utility of sRhoVR 1 for bridging

neuronal transmembrane potential dynamics to behavior inliving organisms, we performed similar in vivo imagingexperiments in awake mice (Figure 5). Mice were implantedwith chronic cranial windows that also allowed loading ofsRhoVR 1 through a silicon injection port (Figure 5a). Micewere briefly anesthetized with isofluorane for intracorticalinjection of sRhoVR 1 (100 to 200 μM) using a quartz pipetpositioned at ∼200 μm below the surface (Figure 5a). Thestaining pattern was similar to that in acute experiments(Figure 5b): sRhoVR 1 comprehensively labeled neuropil, withcell bodies appearing as dark shadows (representative images,Figure 5c,d)). Following recovery from isofluorane, we imagedresponses to brief air puffs to the contralateral whisker pad.Figure 5e shows sRhoVR 1 signal time-courses from fivedifferent ROIs in layer 2/3 imaged consecutively at differentdepths (130−300 μm). In each case, the time-course wascomputed as an average from all pixels within the ROI (∼200× 25 μm imaged at 20 Hz). Robust increases in fluorescencewere observed in response to each air puff. Positive sRhoVR 1

Figure 5. In vivo, two-photon voltage imaging in the barrel cortex of awake mice using sRhoVR 1. (a) The chronic “cranial window,” made byfusing a stack of three 3 mm and one 5 mm glass coverslips, was used to close the exposure. As injection port, a 0.5 mm hole was drilled into the 5mm coverslip and covered with silicone. During implantation surgery, the cranial bone was removed while dura mater was left intact. After 3−4weeks following implantation, sRhoVR 1 (0.1−0.2 mM in ACSF) was pressure-injected with a quartz pipet inserted through the silicone injectionport while the animal was under isoflurane anesthesia; imaging started after recovery from anesthesia (20−30 min after injection). (b) A view fromthe top on the cortical surface after intracortical injection of SulfoRhoVR1 (red); arrow indicates the injection path, the arrowhead points towardthe injection port. Scale bar, 500 μm. (c, d) Typical two-photon images of tissue staining with SulfoRhoVR1 in cortical layer 1 (c) and 2/3 (d).Arrowheads indicate bright cell bodies. Scale bars, 50 μm. (e) Time-courses of sRhoVR 1 fluorescence relative to baseline (ΔF/F); each tracescorresponds to a different ROIs in the same animal at the indicated cortical depth. Dotted red lines indicate timing of contralateral whisker padstimulation with a single air puff. Black arrows point to motion artifacts. sRhoVR 1 fluorescence was acquired in frame scan mode at a frequency of∼20 Hz and normalized to mean fluorescence over the entire time course. All fluorescence time-courses are unfiltered, and uncorrected forbleaching.

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responses indicate depolarizations in shallow (130 μm),intermediate (200 μm) and deeper cortical layers (300 μm,Figure 5e), providing a critical depth resolution constraint forthe interpretation of LFP recordings in the cortex.5 Followingimaging sessions, mice recovered fully and could be againtreated with sRhoVR 1 for voltage imaging. Together, theseexperiments establish the compatibility of sRhoRV-type dyesfor in vivo imaging in mice and demonstrate the utility ofsRhoVR 1 for recording optical transmembrane potentialresponses with depth resolution in the cortex.

■ DISCUSSIONIn summary, we present the design, synthesis, and applicationof sulfonated Rhodamine Voltage Reporter 1 (sRhoVR 1).sRhoVR 1 represents the best of a new class of sulfonatedrhodamine that uses PeT as a voltage-sensing trigger. Withshort synthetic route from commercially available startingmaterials (three steps), high voltage sensitivity (44% ΔF/F per100 mV), an emission maximum centered at 570 nm,enhanced solubility (3−5-fold over RhoVR 1 or RVF5),improved two-photon cross section (∼2× over RVF5 and ∼5×over RhoVR 1), and fast response kinetics capable of trackingaction potentials under both single-photon and two-photonconditions, sRhoVR is a promising candidate for use in vivo.We show that sRhoVR 1 can be deployed in intact mousebrains for two-photon imaging in vivo. By coupling opticalrecording of sRhoVR 1 responses in layer 2/3 of the barrelcortex of mouse, sRhoVR 1 provides a direct measure oftransmembrane potential with essential depth resolution forinterpreting extracellular potentials captured with the LFPrecording. In the case of sensory input via whisker stimulation,depolarization measured via optical sRhoVR 1 signals providedirect evidence for excitatory synaptic transmission at multiple,optically resolved cortical depths. Depolarization of thetransmembrane potential, directly observed with sRhoVR 1via two photon microscopy, was accompanied by negativedeflections in extracellular potential (LFP), consistent with acanonical thalamocortical response. Importantly, sRhoVR 1 isapplicable for imaging in awake, head-fixed mice withimplanted cranial imaging windows, opening the door forlongitudinal in vivo two-photon membrane potential studies inbehaving animals.

■ ASSOCIATED CONTENT*S Supporting InformationThe Supporting Information is available free of charge on theACS Publications website at DOI: 10.1021/acscents-ci.8b00422.

Synthetic, spectroscopic, and imaging conditions andsupporting data (PDF)

■ AUTHOR INFORMATIONCorresponding Author*E-mail: [email protected].

ORCIDEvan W. Miller: 0000-0002-6556-7679NotesThe authors declare the following competing financialinterest(s): EWM is listed as an inventor on a patent ownedby UC Regents for voltage-sensitive fluorophores.

■ ACKNOWLEDGMENTS

We thank Holly Aaron and Jen-Yi Lee for expert technicalassistance and training. Confocal and two-photon microscopywere performed at the CRL Molecular Imaging Center,supported by the Helen Wills Neuroscience Institute. Researchin the Miller lab is generously supported by NIH GrantsR01NS098088 and R35GM119855, the Sloan Foundation, andthe Klingenstein-Simons Fellowship in the Neurosciences.Research in the Devor lab is supported by BRAIN InitiativeMH111359, BRAIN Initiative NS094232, NS057198, andS10RR029050. M.T. was supported by the German ResearchFoundation (DFG TH 2031/1). S.D. acknowledges supportfrom South-Eastern Norway Regional Health Authority,project 2018094.

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