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Introduction to Biostatistics

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  • METODE PENELITIANMETODE PENELITIAN

    MFK 601MFK 601 2 SKS2 SKSMFK 601 MFK 601 2 SKS2 SKS

    Dib PDib PDibyo PramonoDibyo [email protected][email protected]

    [email protected]@gadjahmada.eduMagister Epidemiologi LapanganMagister Epidemiologi Lapangan

    ((Field Epidemiology Training Program Field Epidemiology Training Program FETPFETP))

    Program Pascasarjana Program Pascasarjana FK FK UGMUGM

  • There are three kinds of lies: lieskinds of lies: lies, damned lies anddamned lies and

    statistics

    B j i Di li (1804 1881)Benjamin Disraeli (1804-1881)

  • STATISTIKA:ALAT UNTUK MENGHASILKAN INFORMASI DARI SUATU DATAINFORMASI DARI SUATU DATA

  • KECAMATAN LUKAMENINGGAL PDDK RUSAK RMH GAKIN KK

    SEDAYU 49 3 44759 243 6634 2586 9581

    BANGUNTAPAN 1009 236 80209 5557 21241 4336 17560

    KASIHAN 1035 57 79496 1790 18393 3390 15736

    PIYUNGAN 705 243 38403 5514 13450 4594 10241

    SEWON 350 462 76811 8281 22781 4483 24857

    PAJANGAN 131 36 30538 1228 6054 2394 7219

    PLERET 4855 519 34377 8139 11899 3042 10912

    BANTUL 239 247 59309 4708 15347 3072 14063

    DLINGO 581 18 36836 1377 9477 2825 9680

    JETIS 223 830 50483 11356 14630 3138 13969

    PANDAK 933 112 48561 2966 12795 4178 12147

    IMOGIRI 748 318 56850 5664 22799 4752 13948

    BAMBANG LIPURO 100 607 43262 6587 10135 2339 9933

    SRANDAKAN 48 5 27425 342 6902 1818 7576

    PUNDONG 758 422 33080 6793 9196 1980 7684

    SANDEN 32 2 34216 97 6799 2538 8783

    KRETEK 230 26 31312 1121 8272 2267 7810

  • KECAMATAN LUKA/1000 MENINGGAL/1000 % RUSAK % GAKIN/ /

    SEDAYU 1,09 0,07 3,66 26,99

    BANGUNTAPAN 12,58 2,94 26,16 24,69

    KASIHAN 13,02 0,72 9,73 21,54

    PIYUNGAN 18,36 6,33 41,00 44,86

    SEWON 4,56 6,01 36,35 18,04

    PAJANGAN 4,29 1,18 20,28 33,16

    PLERET 141,23 15,10 68,40 27,88

    BANTUL 4,03 4,16 30,68 21,84

    DLINGO 15,77 0,49 14,53 29,18

    JETIS 4,42 16,44 77,62 22,46

    PANDAK 19,21 2,31 23,18 34,40

    IMOGIRI 13,16 5,59 24,84 34,07

    BAMBANG LIPURO 2,31 14,03 64,99 23,55

    SRANDAKAN 1,75 0,18 4,96 24,00

    PUNDONG 22,91 12,76 73,87 25,77

    SANDEN 0,94 0,06 1,43 28,90

    KRETEK 7,35 0,83 13,55 29,03

  • DISTRIBUSI PROPORSI PENDUDUK YANG MENINGGAL (PER 1000) DI KECAMATAN-

    KECAMATAN KABUPATEN BANTUL

  • 141.23

    DISTRIBUSI PROPORSI PENDUDUK YANG LUKA (PER 1000) DI KECAMATAN-

    KECAMATAN KABUPATEN BANTUL

  • STATISTIKSTATISTIKSTATISTIKSTATISTIK

    1.1. DataData22 Parameter (Indikator)Parameter (Indikator)2.2. Parameter (Indikator)Parameter (Indikator)

    3.3. Metode (Ilmu)Metode (Ilmu)

  • DEFINISI STATISTIKADEFINISI STATISTIKA

  • StatisticsStatisticsStatisticsStatistics

    The science of statistics is essentially a branch of Applied The science of statistics is essentially a branch of Applied Mathematics, and may be regarded as mathematics Mathematics, and may be regarded as mathematics applied to observational data that may be regarded as applied to observational data that may be regarded as (i) study population (ii) study of variation (iii) study(i) study population (ii) study of variation (iii) study(i) study population, (ii) study of variation (iii) study (i) study population, (ii) study of variation (iii) study methods of reduction datamethods of reduction data

    (Fisher, 1950)(Fisher, 1950)

    Statistics is concerned with inferential process, in Statistics is concerned with inferential process, in particular with the planning and analysis of experiments particular with the planning and analysis of experiments or surveys, with the nature of observational errors and or surveys, with the nature of observational errors and sources of variability that obscure underlying patternssources of variability that obscure underlying patternssources of variability that obscure underlying patterns, sources of variability that obscure underlying patterns, and with the efficient summarizing sets of dataand with the efficient summarizing sets of data

    (Kruskal, 1968)(Kruskal, 1968)

  • St ti tiSt ti tiStatisticsStatistics

    Science and art concerning the development Science and art concerning the development d th li ti f th d t ll td th li ti f th d t ll tand the application of methods to collect, and the application of methods to collect,

    organize/summarize, present, analyze and organize/summarize, present, analyze and li tit ti d t i hli tit ti d t i hgeneralize quantitative data, in such a way generalize quantitative data, in such a way

    so that uncertainty in the decision making so that uncertainty in the decision making b l l t d b i th tib l l t d b i th tican be calculated by using mathematics can be calculated by using mathematics

    probabilityprobability

  • STATISTIKASTATISTIKASTATISTIKASTATISTIKA

    Statistika adalah ilmu dan seni Statistika adalah ilmu dan seni tenten--tang pengembangan dan tang pengembangan dan aplikasi metode pengumpulan, aplikasi metode pengumpulan, pengolahan, penyajian, analisis pengolahan, penyajian, analisis dan interpretasi data kuantitatif dan interpretasi data kuantitatif sedemikian rupa, sehingga sedemikian rupa, sehingga kesalahan dalam pengamkesalahan dalam pengam--bilan bilan keputusan dapat diperhitungkeputusan dapat diperhitung--kan kan secara matematik probabilitas.secara matematik probabilitas.

  • Elements of StatisticsElements of StatisticsElements of StatisticsElements of Statistics

    Collecting Summarizing Presenting Analyzing GeneralizingCollecting Summarizing Presenting Analyzing gData

  • El St ti tikEl St ti tikElemen StatistikaElemen Statistika

    1. Pengumpulan1. Pengumpulan2 P l h2 P l h2. Pengolahan2. Pengolahan3. Penyajian3. Penyajian4 A li i4 A li i4. Analisis4. Analisis5. Interpretasi5. Interpretasi

  • Bidang Kajian StatistikaBidang Kajian Statistika

    1. Statistika Deskriptif1. Statistika Deskriptif

    2. Statistika Inferens2. Statistika Inferens

  • Biostatistics

    Descriptive Statistics Inferential StatisticsDescriptive Statistics Inferential Statistics

    Collecting

    CollectingSummarizing

    PresentingA l i

    CollectingSummarizing

    PresentingAnalyzing

    Analyzing Generalizing

    Draw conclusion only to Draw conclusion that applies to s bjects or gro ps hich is biggerythe subject we have studied subjects or groups which is biggerthan we have observed

  • INFERENSI STATISTIKINFERENSI STATISTIKINFERENSI STATISTIKINFERENSI STATISTIK

    POPULASIPOPULASIPOPULASIPOPULASIRataRata--ratarata

    Deviasi StandarDeviasi Standar Inferensi Inferensi Parameter PopulasiParameter Populasi StatistikStatistik

    Pengambilan Pengambilan SAMPELSAMPELSampelSampel RataRata--ratarataSampelSampel RataRata ratarata

    Deviasi StandarDeviasi StandarStatistik SampelStatistik Sampel

  • DATADATADATADATA

    Data are collections of facts about an object, things, or a situationj , g ,

    Types of Data1 Quantitative1. Quantitative

    Discrete

    ContinuousContinuous

    2. Qualitative

  • DATADATA

    Data diartikan sebagai keterangan Data diartikan sebagai keterangan atau fakta mengenai suatu benda, atau fakta mengenai suatu benda, g ,g ,persoalan atau keadaan.persoalan atau keadaan.

  • Ratio

    Quantitative

    Interval

    Data

    Continuous Discrete

    NominalNominal

    Ordinal

    Qualitative

  • SKALA PENGUKURANSKALA PENGUKURAN

    1. Data Nominal1. Data Nominal1. Data Nominal1. Data Nominal2. Data Ordinal2. Data Ordinal3. Data Interval3. Data Interval4 Data Ratio4 Data Ratio4. Data Ratio4. Data Ratio

  • Scale of Meas ementScale of Meas ementScale of MeasurementScale of Measurement

    1. Ratio1. RatioOn a ratio scale measurement begins at a trueOn a ratio scale measurement begins at a trueOn a ratio scale, measurement begins at a true On a ratio scale, measurement begins at a true zero point and the scale has equal intervalzero point and the scale has equal interval

    2 Interval2 Interval2. Interval2. IntervalAn interval scale assign each measurement to An interval scale assign each measurement to one of an unlimited number of categories thatone of an unlimited number of categories thatone of an unlimited number of categories that one of an unlimited number of categories that are equally spaced. The scale has no true zero are equally spaced. The scale has no true zero pointpointpointpoint

  • Scale of Meas ementsScale of Meas ementsScale of MeasurementsScale of Measurements

    3. Nominal 3. Nominal A nominal scales uses names numbers or otherA nominal scales uses names numbers or otherA nominal scales uses names, numbers or other A nominal scales uses names, numbers or other symbols to assign each measurement to one of symbols to assign each measurement to one of a limited numbers of category that can not be a limited numbers of category that can not be g yg yordered one above the otherordered one above the other

    4. Ordinal4. OrdinalAn ordinal scale assign each measurement to An ordinal scale assign each measurement to one of a limited number of categories that are one of a limited number of categories that are ggranked in terms of graded orderranked in terms of graded order

  • Identify the scale measurements of these Identify the scale measurements of these variables :variables :

    1. ARI Status1. ARI Status1. ARI Status1. ARI Status2. Body temperature2. Body temperature3 Rationality of drug use3 Rationality of drug use3. Rationality of drug use3. Rationality of drug use4. Creatinine clearance4. Creatinine clearance5 Length of stay5 Length of stay5. Length of stay5. Length of stay6. Blodd glucose level 2 hours pp6. Blodd glucose level 2 hours pp7 Malaria type7 Malaria type7. Malaria type7. Malaria type8. Serum retinol level8. Serum retinol level9 D l t d bl9 D l t d bl9. Drug related problems9. Drug related problems

    10. Sputum conversion status10. Sputum conversion status

  • 11. Resistence of P falciparum to chloroquine11. Resistence of P falciparum to chloroquine12. Nutritional status12. Nutritional status13. Immunoglobuline level13. Immunoglobuline level14. Body mass index14. Body mass index15. Hb level15. Hb level16. Hepatitis type16. Hepatitis type17. Nosocomial infection17. Nosocomial infection18. Side effect18. Side effect19. Number of drugs per prescription19. Number of drugs per prescriptiong p p pg p p p20. Antituberculosis drug type20. Antituberculosis drug type

  • HOW TO SUMMARIZE DATA ?HOW TO SUMMARIZE DATA ?

    1. Ordered Array1. Ordered Array2. Frequency Distribution2. Frequency Distribution3. Descriptive Measures3. Descriptive Measures

  • Desc ipti e Meas esDesc ipti e Meas esDescriptive MeasuresDescriptive Measures

    Two major mathematical descriptions to Two major mathematical descriptions to describe the shape of the distribution of describe the shape of the distribution of ppobservations :observations :1 Central Tendencies1 Central Tendencies1. Central Tendencies1. Central Tendencies

    mean, median, modemean, median, mode2 Di i / V i bilit2 Di i / V i bilit2. Dispersion/ Variability2. Dispersion/ Variability

    range, variance, standard deviationrange, variance, standard deviation

  • DESCRIPTIVE MEASURES :DESCRIPTIVE MEASURES :

    1. Central Tendency1. Central Tendency

    2. Dispersion2. Dispersion

  • KECENDERUNGAN SENTRALKECENDERUNGAN SENTRAL

    1. Mean1. Mean2. Median2. Median2. Median2. Median3. Modus3. Modus

  • SGOT level of 10 subjectsSGOT level of 10 subjects

    NNumberumber SGOT levelSGOT level

    11 881. 1. 882.2. 993. 3. 10104. 4. 665.5. 101066 776. 6. 777. 7. 888.8. 111199 12129. 9. 1212

    10.10. 1010

  • USIA PENDERITA (KASUS BARU) TB BTA+USIA PENDERITA (KASUS BARU) TB BTA+USIA PENDERITA (KASUS BARU) TB BTA+ USIA PENDERITA (KASUS BARU) TB BTA+ DI PUSKESMAS DEPOK I DAN PUSKESMAS GODEANDI PUSKESMAS DEPOK I DAN PUSKESMAS GODEAN

    PenderitaPenderita UsiaUsia PenderitaPenderita UsiaUsia

    11 4848

    22 5555

    33 4949

    11 3535

    22 2828

    33 252533 4949

    44 4848

    55 5252

    33 2525

    44 4040

    55 5656

    66 4949

    77 5151

    88 5050

    66 5050

    77 5454

    88 585888 5050

    99 4848

    1010 5050

    88 5858

    99 7575

    1010 6262

    1111 6060

    1212 5757

  • PENYEBARAN (DISPERSI)PENYEBARAN (DISPERSI)

    1. Rentang1. Rentang2. Deviasi rata2. Deviasi rata--ratarata2. Deviasi rata2. Deviasi rata ratarata3. Variansi3. Variansi4. Deviasi standar4. Deviasi standar4. Deviasi standar4. Deviasi standar5. Jarak interkuartil5. Jarak interkuartil

  • MeanMeanMeanMean

    M f t l i l l t d bM f t l i l l t d b Mean of a set values is calculated by Mean of a set values is calculated by adding up all the values and dividing this adding up all the values and dividing this

    b th b f l i th tb th b f l i th tsum by the number of values in the setsum by the number of values in the set

    +++n

    xxxxx n...321 +++=

    xn

    ii

    1

    nx i== 1

  • MedianMedianMedianMedian Median is the middle of data which have Median is the middle of data which have

    b d db d dbeen put in an ordered arraybeen put in an ordered array The median is similar to the mean if the data The median is similar to the mean if the data

    k d t th l ftk d t th l ftare skewed to the leftare skewed to the left

    If i ddIf i dd b tib ti(n+1)th

    If n is odd : If n is odd : oobservationbservation

    If n is evenIf n is even

    (n 1)2

    Median is the arithmatic meanMedian is the arithmatic meanof of and and observationobservationn

    2n2+1 th

    th

    2 2

  • ModeModeModeModeMode

    Mode is the value that Mode is the value that occurs most occurs most

    Mode

    frequently in a data frequently in a data setset

    p

    e

    o

    p

    l

    e

    N

    u

    m

    b

    e

    r

    o

    f

  • Type of Measurement Advantages Disadvantagesypof Central Tendency

    g g

    Mean Uses all data valuesAlgebraically defined

    Distorted by outliersDistorted by skewedAlgebraically defined

    and so mathematically manageableKnown sampling

    Distorted by skewed data

    distribution

    Median Not distorted by outliersNot distorted by skewed

    Ignores most of the informationNot distorted by skewed

    datainformationNot algebraically definedComplicated Sampling Distribution

    Mode Easily determined for categorical data

    Ignores most of the informationNot algebraicallyNot algebraically

    definedUnknown Sampling Distribution

  • RangeRangeRangeRange

    Range is the difference between the Range is the difference between the largest and the smallest observation in largest and the smallest observation in ggdata setdata set

    Range=Maximum Minimum

    Range provides a misleading measure of Range provides a misleading measure of spread if there are outliersspread if there are outliers

  • Va ianceVa ianceVarianceVariance

    More representatives measure of More representatives measure of variability than range because it use all variability than range because it use all y gy gmeasurement in the set and their measurement in the set and their individual distances from the mean of the individual distances from the mean of the distributiondistribution

    ( )2( )1

    2

    2

    =

    nxx

    S i

  • Standa d De iationStanda d De iationStandard DeviationStandard Deviation

    Standard deviation is the square root of Standard deviation is the square root of the variancethe variance

    We can assume standard deviation as a We can assume standard deviation as a sort of average of the deviations of thesort of average of the deviations of thesort of average of the deviations of the sort of average of the deviations of the observations from the meanobservations from the mean

    ( )1

    2= n

    xxS i

    1n

  • Measure of dispersion Advantages Disadvantages

    RangeRange Easily determinedEasily determined Uses only two Uses only two observationobservationobservationobservationDistorted by outliersDistorted by outliersTends to increase with Tends to increase with increasing sample sizeincreasing sample size

    VarianceVariance Uses every observationUses every observationAlgebraically definedAlgebraically defined

    Units of measurement Units of measurement are the square of the are the square of the unit of raw dataunit of raw dataSensitive to outliersSensitive to outliersSensitive to outliersSensitive to outliers

    Inappropriate for Inappropriate for skewed dataskewed data

    Standard deviationStandard deviation Same advantages as Same advantages as Sensitive to outliersSensitive to outliersStandard deviationStandard deviation Same advantages as Same advantages as variancevarianceUnits of measurement Units of measurement are the same as raw are the same as raw d td t

    Sensitive to outliersSensitive to outliersInappropriate for Inappropriate for skewed dataskewed data

    datadataEasily interpretedEasily interpreted

  • ExampleExampleSerum level of alanine aminotransferase (ALT) was measured Serum level of alanine aminotransferase (ALT) was measured in all study participants to determine the effects of alcohol in all study participants to determine the effects of alcohol consumption on ALT and were recorded in the following tableconsumption on ALT and were recorded in the following table

    ALT level (U/l) Frequency

    25 18

    40 25

    36 836 8

    60 34

    52 25

    24 1524 15

    15 6

    26 32

    30 22

    85 15

  • Example

    Problems :Problems :1.1. Compute mean, median, mode of serum Compute mean, median, mode of serum

    ALT levelALT level2.2. Compute range, variance and standard Compute range, variance and standard

    deviation of serum ALT leveldeviation of serum ALT leveldeviation of serum ALT level deviation of serum ALT level

  • MeanMeanMeanMeanALT level (U/l) Frequency Frequency x ALT level (fx)

    1515 66 90902424 1515 3603602525 1818 4504502626 3232 8328322626 3232 8328323030 2222 6606603636 88 2882884040 2525 100010004040 2525 100010005252 2525 130013006060 3434 204020408585 1515 12751275

    n = 200 fx = 8295

    8295 fxMean = =

    2008295

    41.48=nf

  • MedianMedianALT level (U/l) Frequency Cumulative

    Frequency15 6 6

    100th

    624 15 2125 18 3926 32 71

    100

    101th30 22 9336 8 10140 25 12652 25 15152 25 15160 34 18585 15 200

    n = 200 even

    122

    thnthn

    ++

    101100 thth

    222 =

    2101100 thth += = 36Median

  • ModeModeModeModeALT level (U/l) Frequency = the most frequent value= the most frequent valueMode

    15 624 1525 18

    qq= = 6060

    25 1826 3230 2236 836 840 2552 2560 34 Most frequent value60 3485 15

    Mostfrequentvalue

  • RangeRangeRangeRange

    Maximum value Maximum value Minimum ValueMinimum Value= 80= 80 1515

    Range=

    80 80 1515= = 6565

  • VarianceVarianceVarianceVariance

    1)( 22 = xxs i

    1n199

    67,379.88=199

    338 59= 338.59=

  • Standa d De iationStanda d De iationStandard DeviationStandard Deviation

    2ss =59.338=

    40.18=


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