doi.org/10.26434/chemrxiv.8241887.v2
Investigating the Effect of Positional Isomerism on the Assembly ofZirconium Phosphonates Based on Tritopic LinkersMarco Taddei, Stephen J. I. Shearan, Anna Donnadio, Mario Casciola, Riccardo Vivani, FerdinandoCostantino
Submitted date: 30/07/2019 • Posted date: 30/07/2019Licence: CC BY-NC-ND 4.0Citation information: Taddei, Marco; Shearan, Stephen J. I.; Donnadio, Anna; Casciola, Mario; Vivani,Riccardo; Costantino, Ferdinando (2019): Investigating the Effect of Positional Isomerism on the Assembly ofZirconium Phosphonates Based on Tritopic Linkers. ChemRxiv. Preprint.
We report on the use of a novel tritopic phosphonic linker,2,4,6-tris[3-(phosphonomethyl)phenyl]-1,3,5-triazine, for the synthesis of a layered zirconium phosphonate,named UPG-2. Comparison with the structure of the permanently porous UPG-1, based on the related linker2,4,6-tris[4-(phosphonomethyl)phenyl]-1,3,5-triazine, reveals that positional isomerism disrupts the porousarchitecture in UPG-2 by preventing the formation of infinitely extended chains connected throughZr-O-P-O-Zr bonds. The presence of free, acidic P-OH groups and an extended network of hydrogen bondsmakes UPG-2 a good proton conductor, reaching values as high as 5.7x10-4 S cm-1.
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Received 00th January 20xx,
Accepted 00th January 20xx
DOI: 10.1039/x0xx00000x
Investigating the effect of positional isomerism on the assembly of zirconium phosphonates based on tritopic linkers
Marco Taddei,a,*Stephen J. I. Shearan,a Anna Donnadio,b Mario Casciola,c Riccardo Vivani,b Ferdinando Costantinoc
We report on the use of a novel tritopic phosphonic linker,
2,4,6-tris[3-(phosphonomethyl)phenyl]-1,3,5-triazine, for the
synthesis of a layered zirconium phosphonate, named UPG-2.
Comparison with the structure of the permanently porous
UPG-1, based on the related linker 2,4,6-tris[4-
(phosphonomethyl)phenyl]-1,3,5-triazine, reveals that
positional isomerism disrupts the porous architecture in UPG-
2 by preventing the formation of infinitely extended chains
connected through Zr-O-P-O-Zr bonds. The presence of free,
acidic P-OH groups and an extended network of hydrogen
bonds makes UPG-2 a good proton conductor, reaching values
as high as 5.7x10-4 S cm-1.
The quest for porous metal phosphonates is a niche research
area that was first explored in the early 90s1 and has recently
gained renewed momentum,2 thanks to some novel synthetic
approaches that have granted access to ordered and porous
compounds. Use of phosphonate monoester linkers, which
feature similar coordination geometry to carboxylates, has
been explored in a systematic fashion, leading to several
microporous compounds.3-6 Post-synthetic hydrolysis of the
phosphonate ester groups has also been demonstrated, with
benefits to the CO2 affinity of the framework.7, 8An alternative
approach based on a similar rationale involves phosphinates as
carboxylic acid analogues, affording a series of Fe-based
compounds with isoreticular structures and high porosity.9 One
peculiar and intriguing feature of these materials is that
functionalization of the framework can be accomplished by
tuning the size and nature of the pending group attached to the
P atom. Introduction of ancillary ligands, e.g. bipyridines or
dicarboxylates, which can act as additional bridging units
connecting different inorganic struts, has also been successful
in generating porous materials based on either phosphonic or
phosphinic linkers.10-13 Shifting the focus to the reaction
medium, ionic liquids have recently been found to promote the
formation of secondary building units, similar to those observed
in carboxylate-based metal-organic frameworks (MOFs),
yielding single crystals of three new zirconium phosphonates
with open framework structures.14 The use of linkers having
specific geometrical features, not compatible with the
formation of the dense inorganic layers typical of metal
phosphonates, is another strategy of election for inducing
porosity in this family of materials.15-17 Several reports have
appeared over the last few years, involving tritopic,18-22
tetrahedral14, 23-25 and tetratopic square linkers,26-28 which
prove that tuning the geometry and symmetry of the linker is
indeed an effective way to access open framework
architectures, reaching surface areas above 1000 m2 g-1. Besides
porosity, the most striking characteristic of these phosphonate-
based MOFs is their exceptional chemical stability, which often
exceeds that of the most stable classical carboxylate-based
counterparts. This can be attributed to the strong affinity of the
phosphonic group for metal ions, which makes metal
phosphonates very insoluble and resistant to hydrolysis, even in
aggressive conditions.29, 30 According to the hard and soft acids
and bases (HSAB) theory,31 combination of hard acids, such as
Zr4+, Ti4+, Al3+, Cr3+, and hard oxygenated bases, such as
carboxylate or phosphonate groups, leads to formation of
strong metal-oxygen bonds.32 The higher stability of metal
phosphonates derives from the higher charge and the increased
number of donor atoms of the -PO3H2 group.29
We recently reported on the synthesis of the first crystalline and
microporous zirconium phosphonate, UPG-1,19 which is based
on the 2,4,6-tris[4-(phosphonomethyl)phenyl]-1,3,5-triazine
linker (hereafter H6pttbmp, scheme 1). UPG-1 features two
types of monodimensional channels with diameter of about 5 Å
and 10 Å and is permanently porous, with a BET surface area of
410 m2 g-1 and a pore volume of 0.2 cm3 g-1 (Figure S1). In an
effort to gain deeper understanding of the structure directing
function of the linker, we have focused on the influence of
positional isomerism on the assembly of the crystal structure.
To this purpose, we have prepared the novel 2,4,6-tris[3-
(phosphonomethyl)phenyl]-1,3,5-triazine linker (hereafter
a. Energy Safety Research Institute, Swansea University, Fabian Way, Swansea, SA1 8EN, United Kingdom. Email: [email protected]
b. Dipartimento di Scienze Farmaceutiche, University of Perugia, Via del Liceo 1, 06123 Perugia, Italy
c. Dipartimento di Chimica Biologia e Biotecnologia, University of Perugia, Via Elce di Sotto 8, 06123 Perugia, Italy
Electronic Supplementary Information (ESI) available: [Synthetic procedures; organic compounds characterisation (1H NMR, 13C NMR, HSQC, MS, FTIR); structure solution and refinement details; additional structural figures; additional PXRD patterns]. See DOI: 10.1039/x0xx00000x
2
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H6mttbmp, scheme 1), where the phosphonomethyl moiety is
in meta position with respect to the central triazine core, rather
than in para position as in H6pttbmp.
Scheme 1. Molecular formulae of the H6pttbmp and H6mttbmp linkers.
H6mttbmp was synthesised following a very similar three-step
route to that previously developed for H6pttbmp19 (see ESI for
details and full characterisation of intermediate and final
products, Figures S2-15). H6mttbmp was employed as a linker
for the synthesis of a new microcrystalline zirconium
phosphonate, named UPG-2, whose structure was determined
and refined using powder X-ray diffraction (PXRD) data (see ESI
for details on structure solution and refinement, Table S1,
Figure S16). The crystal structure of UPG-2 is shown in Figure 1.
Figure 1. View of the crystal structure of a single layer of UPG-2 along the b axis
(a) and perpendicular to the bc plane (b). The carbon atoms belonging to the linker
molecule lying lower along the a axis are coloured in orange for the sake of clarity.
Colour code: Zr, pink; P, green; N, blue; O, red; C, grey and orange.
UPG-2 crystallizes in the triclinic space group P-1, with lattice
parameters a = 8.8147(4) Å, b = 9.6066(5) Å, c = 16.338(1) Å, α
= 88.426(4) °, β = 83.914(4) °, γ = 85.607(4) °. The asymmetric
unit consists of one Zr atom sitting on an inversion centre
(special position with multiplicity = 1), one H4mttbmp2-
fragment and two water molecules (each with occupancy of
0.75). The Zr atom is octahedrally coordinated by six oxygen
atoms belonging to six different phosphonate groups (three of
which are crystallographically independent and three
generated by symmetry). Each H4mttbmp2- molecule is
coordinated to three different Zr atoms through monodentate
phosphonate groups. The resolution of PXRD data is not
sufficient to locate hydrogen atoms, but, based on
electroneutrality requirements, we can deduce that four of six
P-O groups coordinated to Zr are negatively charged P-O-,
whereas two of them are neutral P=O. The presence of purely
monodentate phosphonate groups is, to the best of our
knowledge, observed here for the first time in any known
zirconium phosphonate. This feature leads to lack of connection
among ZrO6 octahedra, which remain isolated from each other
(the shortest Zr-Zr distance is 8.82 Å). The connection of
isolated ZrO6 octahedra and H4mttbmp2- units gives rise to a
layered structure, with layers about 9 Å thick lying in the bc
plane. Each layer is connected to adjacent ones through a
network of hydrogen bonds extending along the b axis that
involves free P-O groups and two water molecules sitting in the
interlayer space (Figure S17). Detailed views of the network of
hydrogen bonds involving each phosphonate group and each
water molecule are provided in Figures S18-22. In addition, a
system of π-π stacking interactions extending along the a axis
exists among the aromatic rings of H4mttbmp2-, further
contributing to efficient stacking of layers (Figure S23).
Given the similar linkers used for the synthesis of UPG-1 and
UPG-2, detailed analysis and comparison of their structural
features is in order. The two compounds were prepared in very
similar reaction conditions: same temperature (80 °C), same
Zr/linker/HF ratio (1:1:50), same concentration of metal and
linker (0.018 M). Therefore, the differences in the resulting
crystal structures can purely be attributed to the influence of
the geometrical arrangement of the linkers. UPG-1 and UPG-2
display identical chemical composition (if extraframework
water molecules are not considered), with the same Zr/linker
ratio (1:2) and the linkers in the same protonation state (four
protons of the original six are retained after reaction with the
metal). Both linkers display a cis-trans-trans configuration of the
phosphonate groups, with respect to the aromatic backbone,
however the intramolecular P-P distances are significantly
different: 13.0, 14.7 and 14.9 Å in UPG-1; 6.8, 12.4 and 13.8 Å in
UPG-2 (Figure 2). This suggests that H4mttbmp2- can adopt a
more “compact” conformation than H4pttbmp2-. A simple
optimisation of the molecular structure of the linker H6mttbmp
using the Merck molecular force field 94 (MMFF94),33 as
implemented in the software Avogadro,34 reveals that the
lowest energy configuration achievable displays two
intramolecular hydrogen bonds between two phosphonic
groups (Figure S24). The possible presence of these non-
covalent interactions also in reaction conditions could explain
why the linker H6mttbmp prefers the more compact
conformation. As a result, the connectivity between the organic
linkers and the metal atoms in UPG-1 and UPG-2 is remarkably
different: both H4pttbmp2- and H4mttbmp2- are coordinated to
3
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three Zr atoms, but the former linker displays one bidentate,
one monodentate and one non-coordinated phosphonate
group (Figure 2a), whereas the latter linker displays three
monodentate phosphonate groups (Figure 2b). The presence of
bidentate phosphonate groups in UPG-1 is ultimately crucial to
afford connection of adjacent Zr atoms along the c axis direction
and formation of infinite inorganic building units (IBUs) (Figure
S25). These 1D IBUs are connected in the remaining two
dimensions by the organic linkers, resulting in the formation of
a 3D framework (Figure S1). As previously discussed, the lack of
polydentate phosphonate groups prevents formation of
extended IBUs in UPG-2 and, as a consequence, the structure
cannot extend in the third dimension, giving rise to a 2D layered
motif.
Figure 2. Linker conformation and connectivity in UPG-1 (a) and UPG-2 (b). Color code:
Zr, pink; P, green; N, blue; O, red; C, gray.
The thermogravimetric curve of UPG-2, measured under air, is
shown in Figure 3. The first weight loss, occurring at
temperature lower than 130 °C, is attributed to the desorption
of three water molecules per formula unit (calculated: 4.0%;
observed: 4.0%). The compound is then stable until about 280
°C, when another 5.0% weight loss is observed. This loss could
be due to some degree of condensation of the many free P-O
groups present in the structure. Similar behaviour was observed
for UPG-1.19 Decomposition of the organic part of the structure
takes place above 480 °C. The total weight loss at 1200 °C is
73.4%. Zirconium phosphonates with P/Zr ratio ≥ 2 usually
thermally decompose to ZrP2O7.35, 36 This product is also the
only crystalline phase observed in the PXRD pattern of the
decomposition residue of UPG-2 after TGA (Figure S26),
allowing to calculate a weight loss of 80.0%, larger than the
observed one. Since UPG-2 features an unusually high P/Zr ratio
of 6, it is possible that part of the phosphonate groups is not
completely decomposed at 1200 °C and a mixture of ZrP2O7 and
other, amorphous phosphorus containing residues is formed.
Figure 3.Thermogravimetric curve of UPG-2.
The proton conductivity of pellets of UPG-2 was measured at
100 °C, under controlled relative humidity (RH). Figure 4 shows
that the conductivity increases by a factor of ca. 7, from 8.5x10-
5 to 5.7x10-4 S cm-1, with increasing RH from 40 to 95%. The
value at 95% RH is in line with those previously observed for
other Zr phosphonates.37 To get insight into the physical origin
of the proton transport, the hydration of UPG-2 was
determined under the same conditions used to measure the
conductivity. At 100 °C and 95% RH, UPG-2 takes up 6.2 water
molecules per unit formula (about one water molecule per –PO3
group), while 0.8 water molecules are lost after lowering RH to
40%. This loss appears to be too small to account for the large
conductivity changes observed in this RH range. Therefore, it
may be inferred that the pellet conductivity originates mainly
from surface/intergrain proton transport and is affected by the
hydration of the microcrystal surface, which is expected to be
more susceptible than bulk hydration to RH changes. The
excellent stability of UPG-2 in measurement conditions is
proved by the PXRD pattern of the ground pellet, which is
practically identical to that of the as synthesized material
(Figure S27).
Figure 4. Proton conductivity of UPG-2 at 100 °C as a function of relative humidity.
Conclusions
In this work, we have investigated the effect of positional
isomerism in tritopic phosphonic linkers on the assembly of the
crystal structure of the relative Zr4+ derivatives. We found that
4
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combination of Zr4+ and H6mttbmp, having -CH2-PO3H2 groups
in meta position with respect to the central triazine core,
affords a compound with unprecedented 2D layered structure
featuring isolated Zr octahedra (UPG-2), as opposed to the 3D
open framework obtained when H6pttbmp, having -CH2-PO3H2
groups in para position with respect to the central triazine core
(UPG-1). The main structure-driving factor seems to be the
ability of H6mttbmp to adopt a conformation where the
intramolecular P-P distances are significantly shorter than in
H6pttbmp, thus preventing formation of extended inorganic
building units and development of the crystal structure in the
third dimension. This is attributed to the presence of
intramolecular hydrogen bonding interactions between
phosphonic groups in the free linker. Thanks to the large
number of hydrogen bonds involving phosphonic groups and
water molecules, UPG-2 is a good proton conductor, reaching
conductivity as high as 5.7x10-4 S cm-1 at 100 °C and 95% relative
humidity. These results add to the existing body of knowledge
concerning the crystal engineering of Zr phosphonates and can
help in designing new phosphonic linkers with specific
geometrical features to induce formation of structural
arrangements with the desired dimensionality.
Conflicts of interest
There are no conflicts to declare.
Acknowledgement
The authors acknowledge the European Union’s Horizon 2020
research and innovation programme under the Marie
Skłodowska-Curie grant agreement No 663830 (M.T.) and the
National Mass Spectrometry Facility (NMSF) at Swansea
University.
Notes and references
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5
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TABLE OF CONTENTS
Combination of the novel linker 2,4,6-tris[3-
(phosphonomethyl)phenyl]-1,3,5-triazine and Zr(IV)
afforded a layered compound that lacks extended
inorganic connectivity and displays good proton
conductivity.
download fileview on ChemRxivTaddei_Manuscript_ChemRxiv_v2.pdf (542.03 KiB)
Investigating the effect of positional isomerism on the
assembly of zirconium phosphonates based on tritopic
linkers
Marco Taddei,1,* Stephen J. I. Shearan,1 Anna Donnadio,2 Mario Casciola,3 Riccardo Vivani,2 Ferdinando
Costantino3
1Energy Safety Research Institute, Swansea University, Fabian Way, Swansea, SA1 8EN, United
Kingdom 2Dipartimento di Scienze Farmaceutiche, University of Perugia, Via del Liceo 1, 06123 Perugia, Italy 3 Dipartimento di Chimica Biologia e Biotecnologia, University of Perugia, Via Elce di Sotto 8, 06123
Perugia, Italy
Email: [email protected]
ELECTRONIC SUPPLEMENTARY INFORMATION
Figure S1. Crystal structure of UPG-1 seen along the c axis. Colour code: Zr, pink; P, green; N, blue; O,
red; C, grey. Solvent molecules were removed for the sake of clarity.
Experimental Section
Chemicals.
Zirconium oxide chloride octahydrate was obtained from Merck Millipore. 3-
bromomethylbenzonitrile,trifluoromethanesulfonic acid and chlorotrimethylsilane were obtained
from Fluorochem. Triethylphosphite was obtained from VWR. Potassium iodide, concentrated
ammonium hydroxide, isopropanol, hexane, diethyl ether, hydrofluoric acid and anhydrous
acetonitrile were obtained from Sigma-Aldrich. Methanol was obtained from Carlo Erba Reagenti. All
chemicals were used as received, with no further purification.
Analytical methods.
Nuclear magnetic resonance (NMR): 1H and 31P NMR spectra were recorded on a Bruker AV-500
instrument. All chemical shifts are reported in ppm and coupling constants are reported in Hz.
Mass spectrometry (MS): MS data for mttbmBr was acquired by atmospheric pressure chemical
ionisation (APCI) via an atmospheric solids analysis probe (ASAP) on a Waters Xevo G2-S instrument.
A small amount of solid sample was transferred to the tip of a glass capillary, which was then placed
within the ASAP source and inserted into the instrument. The vaporizer temperature was increased
to 450°C, at which point ions were observed and acquired. Data was processed using vendor MassLynx
software. MS data for Et6mttbmp was acquired by positive mode nano-electrospray ionisation (nESI)
via and Advion TriVersa NanoMate on a Thermo Fisher Scientific LTQ Orbitrap. The sample was
prepared by dissolving in dichloromethane (DCM; HPLC grade, Fisher Scientific) and diluting into a
solution of ammonium acetate (NH4OAc; Sigma-Aldrich) in methanol (MeOH; HPLC grade, Fisher
Scientific). An aliquot was loaded into the NanoMate microtiter plate well and infused into the
Orbitrap instrument for acquisition. The Orbitrap tube lens voltage was +150V. Data was processed
using vendor Xcalibur software. MS data for H6mttbmp mass spectrometry data was acquired by
negative mode nano-electrospray ionisation (nESI) via and Advion TriVersa NanoMate on a Thermo
Fisher Scientific LTQ Orbitrap. The sample was prepared by dissolving in a 1:1 (v:v) mixture of
water:methanol (H2O:MeOH; HPLC grade, Fisher Scientific) or 1:1 (v:v) mixture of water:acetonitrile
(H2O:MeCN; HPLC grade, Fisher Scientific), respectively, and diluting into a solution of diethyl amine
(DEA; Sigma-Aldrich) in MeOH. An aliquot was loaded into the NanoMate microtiter plate well and
infused into the Orbitrap instrument for acquisition. The Orbitrap tube lens voltage was −100V. Data
was processed using vendor Xcalibur software.
Attenuated-total reflectance infrared (ATR-IR) spectroscopy: a Thermo Scientific Nicolet iS10 FT-IR
Spectrometer was used to collect the ATR-IR spectra of all samples. Spectra were recorded in the 650
– 4000 cm-1 region with 16 scans.
Elemental analysis: The zirconium and phosphorus contents were obtained by inductively coupled
plasma optical emission spectroscopy using a Varian Liberty Series II instrument working in axial
geometry, after mineralization of the sample with concentrated hydrofluoric acid. The carbon,
hydrogen, and nitrogen contents were obtained with an EA 1108 CHN Fisons instrument.
Thermogravimetric analysis (TGA): TGA was performed using a Netzsch STA490C thermoanalyser
under a 20 mL min−1 air flux with a heating rate of 5 °C min−1.
Powder X-ray diffraction (PXRD): the PXRD pattern for structure solution and Rietveld refinement was
collected in the 4-80 °2θ range, with 0.017 ° step size and 150 s step-1 counting time, using the Cu Kα
radiation on a PANalytical X’PERT PRO diffractometer, PW3050 goniometer, equipped with an
X’Celerator detector. The long fine focus (LFF) ceramic tube operated at 40 kV and 40 mA.
Proton conductivity and water uptake: Conductivity measurements were carried out on pellets of
pressed powder by impedance spectroscopy as described elsewhere.1 The pellet conductivity was
determined at 100 °C and decreasing relative humidity (RH) from 95% to 40%. All of the conductivity
values here reported refer to measurements carried out after the conductivity had reached a constant
value for at least 2 hours. Water uptake at 100 °C, and RH of 40% and 100%, was determined by means
of a cell, having the same size and shape as the conductivity cell, where the pellet holder was replaced
by a glass container hosting the sample.1 After one day equilibration at the desired RH value, the water
content was calculated on the basis of the weight change after sample drying at 120 °C, by taking into
account the amount of water trapped in the sample container at the temperature and RH of the
experiment.
Synthesis of 2,4,6-tris[3’-(bromomethyl)phenyl]-1,3,5-triazine (mttbmBr).
3-bromomethylbenzonitrile (5 g, 6.38 mmol) was placed in a 100 mL Schlenk flask and kept in a water-
ice bath. Trifluoromethanesulfonic acid (5 mL) was progressively added under N2. After the addition,
the flask was closed, and the mixture was warmed to room temperature and stirred for 20 h. Then,
the mixture was poured in ice and neutralised with concentrated ammonium hydroxide. The solid
phase was collected by filtration and washed with water and ethanol. The white solid was dried in a
hot air oven at 60 °C. 4.95 g of product was recovered (Yield: 99%).
1H NMR (CDCl3, 500 MHz): = 8.74 – 8.61 (m, 6H, aromatic), 7.61 (m, 3H, aromatic), 7.52 (m, 3H,
aromatic), 4.62 (s, 6H, Ph-CH2-Br) ppm (Figure S2).
The low solubility of mttbmBr in the deuterated solvents we have available in our laboratory (CDCl3,
CD3OD, d6-DMSO) prevented us from obtaining well resolved 13C NMR and HSQC spectra.
Mass spectrometry: 585.9136 m/z [M+H]+ (Figure S3).
Attenuated total reflectance infrared (ATR-IR) analysis also clearly shows that the 3-
bromomethylbenzonitrile starting material and the mttbmBr product produce very different spectra
(Figure S6).
Figure S2. 1H-NMR spectrum of mttbmBr.
Figure S3. Mass spectrum of mttbmBr (bottom) and theoretical isotope pattern for the [M+H]+ species
(bottom).
Figure S4. ATR-IR spectra of 3-bromomethylbenzonitrile (black) and mttbmBr (red). The band at 2227
cm-1 in the spectrum of 3-bromomethylbenzonitrile is assigned to the stretching of the nitrile group.
The band has a weird shape because it falls in the same region as the asymmetric stretching of CO2,
which is accounted for in the background spectrum. This band completely disappears in the spectrum
of mttbmBr, while a new band at 1518 cm-1 appears, which is assigned to the stretching of the C=N
double bonds in the triazine ring.
Synthesis of hexaethyl [1,3,5-triazine-2,4,6-triyltris(3,1-phenylenemethylene)]tris(phosphonate)
(Et6mttbmp).
mttbmBr (4.64 g, 8.0 mmol) and triethylphosphite (8.2 mL, 47.8 mmol) were introduced in a 100 mL
round bottom flask. The mixture was heated under reflux for 4.5 h under a N2 atmosphere. After
cooling, a viscous liquid was obtained, which was stirred overnight in 200 mL of hexane under a N2
atmosphere, forming a white solid. The white solid was filtered and dried in a desiccator under
vacuum. 4.45 g of product was recovered (Yield: 74%).
1H NMR (CDCl3, 500 MHz): = 8.74 – 8.63 (m, 6H, aromatic), 7.62 (m, 3H, aromatic), 7.56 (t, J = 7.6 Hz,
3H, aromatic), 4.10 (dq, J = 8.0, 7.1 Hz, 12H, O-CH2), 3.37 (d, J = 21.6 Hz, 6H, Ph-CH2-P), 1.30 (t, J = 7.1
Hz, 18H, -CH3) ppm (Figure S5).
13C NMR (CDCl3, 500 MHz): = 171.47, 136.46, 133.99, 132.32, 130.17, 128.94, 127.75, 62.40, 34.82
(d), 16.38 ppm. (Figures S6-7).
31P NMR (CDCl3, 500 MHz): = 26.09 (m) ppm (Figure S8).
Mass spectrometry: 760.2656 m/z [M+H]+; 777.2942 [M+NH4]+ (Figure S9).
Figure S5. 1H-NMR spectrum of Et6mttbmP: aromatic protons region (top) and aliphatic protons region
(bottom). For the sake of consistency, the labelling of H atoms in Figure S2 is transferred here and
additional labels are used for the ethyl groups’ protons.
Figure S6. 13C-NMR spectrum of Et6mttbmP. For the sake of consistency, the labelling of H atoms in
Figure S5 has been translated to the corresponding C atoms.
Figure S7. HSQC spectrum of Et6mttbmP: aromatic signals region (top) and aliphatic signals region
(bottom). Labelling is the same as in Figures S5-6.
Figure S8. 31P-NMR spectrum of Et6mttbmP.
Figure S9. Mass spectrum of Et6mttbmp (top) and theoretical isotope profiles for the [M+H]+ (centre)
and the [M+NH4]+ species (bottom).
Synthesis of 2,4,6-tris[3-(phosphonomethyl)phenyl]-1,3,5-triazine (H6mttbmp).
Et6mttbmp (3.0 g, 4.0 mmol) was dissolved in anhydrous acetonitrile (50 mL) inside a 250 mL round
bottom flask under N2 flow. Then, chlorotrimethylsilane (4.5 mL, 36.0 mmol) and potassium iodide
(5.94 g, 36.0 mmol) were added. The mixture was heated to reflux under a N2 atmosphere for 3.5 h.
Then, the mixture was filtered to remove potassium chloride, the mother liquor was dried in a rotary
evaporator to remove acetonitrile and the excess chlorotrimethylsilane and water was added. After
hydrolysis of the trimethylsilylester, the mixture was washed with diethyl ether to remove the
trimethylsilanol side product. The water phase was recovered and dried in a rotary evaporator. The
white solid was washed in isopropanol, filtered and dried in a hot air oven at 60 °C. 1.35 g of product
was recovered (Yield: 58%).
1H NMR (D2O + K2CO3, 500 MHz): δ = 8.37 (m, 3H, aromatic), 8.31 (dq, J = 7.7, 1.6 Hz, 3H aromatic),
7.56 (dq, J = 7.7, 1.7 Hz, 3H, aromatic), 7.47 (t, J = 7.7 Hz, 3H, aromatic), 2.92 (d, J = 19.5 Hz, 6H, Ph-
CH2-P) ppm. (Figure S10)
13C NMR (D2O + K2CO3, 500 MHz): = 172.66, 139.45, 135.03, 134.26, 130.12, 128.72, 126.03, 37.39
(d) ppm. (Figures S11-12).
31P NMR (D2O + K2CO3, 500 MHz): = 17.30 (t, J = 19.3 Hz) ppm. (Figure S13)
Mass spectrometry: 590.0656 m/z [M-H]- + [2M-2H]2- (Figure S9); 294.5290 m/z [M-2H]2-; 305.5198
m/z [M-3H+Na]2-. (Figure S14)
Figure S10. 1H-NMR spectrum of H6mttbmP: aromatics proton region (top) and methylene protons
region (bottom).
Figure S11. 13C-NMR spectrum of H6mttbmP. For the sake of consistency, the labelling of H atoms in
Figure S10 has been translated to the corresponding C atoms.
Figure S12. HSQC spectrum of H6mttbmP: aromatic signals region (top) and methylene signals region
(bottom). Labelling is the same as in Figures S10-11.
Figure S13. 31P-NMR spectrum of H6mttbmP.
Figure S14. Mass spectrum of H6mttbmP in the 589.5-593.5 m/z region (top) and theoretical isotope
profiles for the [M-H]- (centre) and the dimeric [2M-2H]2- species (bottom).
Figure S15. Mass spectrum of H6mttbmP in the 293-310 m/z region (top) and theoretical isotope
profiles for the [M-2H]2- (centre) and the [M-3H+Na]2- species (bottom).
Synthesis of Zr(H4mttbmp)23H2O (UPG-2).
ZrOCl28H2O (64 mg, 0.2 mmol) was dissolved in HF 2.9 M (3.5 mL, 10 mmol) in a plastic bottle. The
mixture was diluted with water (8.0 mL), then H6mttbmp (118 mg, 0.2 mmol) was added. The bottle
was closed and kept in an oven at 80 °C for seven days. The white solid was then filtered under
vacuum, washed with water and methanol, and dried at room temperature. 108 mg of product was
recovered (Yield: 80%, based on H6mttbmp).
Analysis: Calcd for C48H50N6O21P6Zr: Zr = 6.9%,P = 14.1%, C = 43.5%; H = 3.8%, N = 6.3%; Found: Zr =
7.1%, P = 12.9%, C = 46.3%; H = 4.5%, N = 6.1%.
Structure Determination and Refinement.
The crystal structure of UPG-2 was solved ab initio from PXRD data. Indexing was performed using the
TREOR program,2 using the positions of 49 peaks in the 5-30 °2θ range and finding a triclinic cell with
M(20) = 26 and no unindexed lines. The structural model was determined using the real space global
optimization methods implemented in the FOX program:3 one mttbmp fragment and one ZrO6
octahedron, placed in the inversion center, were input, according to the observed P/Zr ratio of 6. Trial
structures were generated using the “Parallel Tempering” algorithm4 implemented in FOX, using the
following antibump distances: P-Zr = 3 Å, P-P = 3 Å, C-Zr = 4 Å, C-O = 2.5 Å, O-O = 2.5 Å, O-N = 4 Å, P-N
= 4 Å. Rietveld refinement of the structural model was performed using the GSAS program.5 First, zero-
shift, unit cell, background, and profile-shape parameters were refined. A corrected pseudo-Voigt
profile function (six terms) with two terms for the correction of asymmetry at the low-angle region
was used. Then, atomic coordinates were refined by restraining the bond distances to the following
values: Zr-O = 2.00(5) Å, P-O = 1.55(5) Å, P-C = 1.80(5) Å, aromatic C-C = 1.39(5) Å, and C-N = 1.32(5)
Å. The statistical weight of these restraints was decreased as the refinement proceeded. The position
of water molecules was determined using difference Fourier maps, which showed two peaks of
residual electron density in the interlayer space. The occupancy of these water molecules was
arbitrarily set to 0.75, in agreement with the observed weight loss from TGA, discussed herein. Finally,
atomic displacement parameters were refined by constraining them to have the same value. At the
end of the refinement, the shifts in all parameters were less than their standard deviations.
Table S1 lists the crystal data and refinement details. Figure S16 shows the final Rietveld and difference
plots.
Table S1. Structural data and refinement details for UPG-2.
empirical formula C48H50N6O21P6Zr
formula weight 1323
crystal system triclinic
space group P-1
a/Å 8.8147(4)
b/Å 9.6066(5)
c/Å 16.338(1)
α/° 88.426(4)
β/° 83.914(4)
γ/° 85.607(4)
volume/Å3 1371.4(2)
Z 1
calculated density/g cm-3 1.59
data range/°2θ 4-80
wavelength/Å 1.54056
n. of data points 4470
n. of reflections 1626
n. of parameters 151
n. of restraints 136
Rpa 0.0395
Rwpb 0.0511
RF2c 0.05960
GOFd 2.91
a Rp = |Io-Ic | / Io; bRwp = [ w(Io-Ic) 2 / wIo2 ]1/2; cRF2 = |Fo
2 - Fc2 | / |Fo
2 |; d GOF = [ w(Io-Ic)2 /
(No - Nvar)]1/2
Figure S16. Final Rietveld plot for UPG-2, reporting the observed pattern (red symbols), the calculated
pattern (green line), and their difference (pink line). Black markers at the bottom indicate the
calculated positions of peaks.
Figure S17. View of the hydrogen bonding network existing between the layers of UPG-2. Zr octahedra
belonging to adjacent layers are coloured different for the sake of clarity. Colour code: Zr, pink/light
blue; P, green; O, red; C, grey. Hydrogen bonds are represented as red dashed lines.
Figure S18. View of the hydrogen bonding interactions involving the phosphonate group centred
around P26. Colour code: Zr, pink; P, green; O, red; C, grey. Hydrogen bonds are represented as red
dashed lines.
Figure S19. View of the hydrogen bonding interactions involving the phosphonate group centred
around P31. Colour code: Zr, pink; P, green; O, red; C, grey. Hydrogen bonds are represented as red
dashed lines.
Figure S20. View of the hydrogen bonding interactions involving the phosphonate group centred
around P36. Colour code: Zr, pink; P, green; O, red; C, grey. Hydrogen bonds are represented as red
dashed lines.
Figure S21. View of the hydrogen bonding interactions involving Ow1. Colour code: P, green; O, red.
Hydrogen bonds are represented as red dashed lines.
Figure S22. View of the hydrogen bonding interactions involving Ow2. Colour code: P, green; O, red.
Hydrogen bonds are represented as red dashed lines.
Figure S23. Space filling model view of the system of π-π stacking interactions extending along the a
axis. Colour code: N, blue; C, grey.
Figure S24. Optimised conformations of the H6mttbmp linker and their relative energy, normalised to
the energy of the least stable conformer (a). Colour code: P, yellow; O, red; N, blue; C, grey; H, white.
Hydrogen bonds are represented as red dashed lines.
Figure S25. Comparison of the 1D IBU found in UPG-1 (left) and the 0D IBU in UPG-2 (right). Colour
code: Zr, pink; P, green; O, red; C, grey.
Figure S26. Calculated PXRD pattern for ZrP2O7 (COD 1010464) (black) and PXRD pattern of the TGA
residue for UPG-2 (red).
Figure S27. PXRD patterns of UPG-2 as synthesised (black) and after the conductivity measurement
(red).
REFERENCES
1. M. Taddei, A. Donnadio, F. Costantino, R. Vivani and M. Casciola, Inorg. Chem., 2013, 52, 12131-12139.
2. P.-E. Werner, L. Eriksson and M. Westdahl, J. Appl. Crystallogr., 1985, 18, 367-370. 3. V. Favre-Nicolin and R. Cerny, J. Appl. Crystallogr., 2002, 35, 734-743. 4. M. Falcioni and M. W. Deem, J. Chem. Phys., 1999, 110, 1754-1766. 5. A. C. Larson and R. B. V. Dreele, "General Structure Analysis System (GSAS)" Los Alamos
National Laboratory Report LAUR 86-748, 2000.
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