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Lung Cancer 83 (2014) 44–50 Contents lists available at ScienceDirect Lung Cancer journal homepage: www.elsevier.com/locate/lungcan Loss of an EGFR-amplified chromosome 7 as a novel mechanism of acquired resistance to EGFR-TKIs in EGFR-mutated NSCLC cells Koh Furugaki, Toshiki Iwai, Yoichiro Moriya , Naoki Harada, Kaori Fujimoto-Ouchi Product Research Department, Kamakura Research Laboratories, Chugai Pharmaceutical Co., Ltd., Japan article info Article history: Received 11 June 2013 Received in revised form 10 September 2013 Accepted 5 October 2013 Keywords: Erlotinib EGFR-TKI Mutation Resistance Non-small cell lung cancer NSCLC abstract Epidermal growth factor receptor tyrosine kinase inhibitors (EGFR-TKIs) show notable effects against non-small cell lung cancers (NSCLCs) harboring EGFR-activating mutations. However, almost all patients eventually acquire resistance to EGFR-TKIs. In this study, we established novel erlotinib resistant NSCLC cells and examined their resistant mechanisms. Resistant cells were established in 14, 3, and 0 wells exposed to 0.1, 1, and 10 M erlotinib, respectively. The IC 50 values of these cells were 47- to 1209-fold higher than that of the parent cells. No secondary T790M mutation was detected in any resistant cells. However, in 13/17 resistant cells, EGFR copy number was reduced less than approximately one-eighth of parent cells, and in one resistant cell (B10), >99.99% of the population was EGFR-unamplified cells. Most (97.5%) parent cells showed EGFR amplification, but 2.5% of the population comprised EGFR-unamplified cells. An EGFR-unamplified clone (4D8) isolated from parent cells in erlotinib-free normal medium also showed erlotinib resistance comparable to the resistant B10 cells. Loss of an EGFR-amplified chromosome 7(EGFR-ampch7) was observed in 4D8 and B10 cells. EGFR-unamplified cells were constantly maintained as a minor population of the parent cells under normal cell culture conditions. In conclusion, loss of an EGFR-ampch7 causes acquired resistance in EGFR-mutated HCC827 cells exposed to a relatively low concentration of erlotinib, but a high concentration prevents the emergence of resistance. © 2013 The Authors. Published by Elsevier Ireland Ltd. All rights reserved. 1. Introduction Non-small cell lung cancer (NSCLC) is the most common type of lung cancer, accounting for approximately 80% of lung cancers. NSCLC is attributed in part to somatic mutations of the epider- mal growth factor receptor gene (EGFR) [1]. The most common mutations are an in-frame E746-A750 deletion in exon 19 and a single-point substitutional L858R mutation in exon 21, both of which are located in the tyrosine kinase domain of EGFR. These two mutations are observed in approximately 90% of EGFR mutations and are termed “activating mutations” [2]. EGFR-TKIs, such as gefitinib and erlotinib, block autophosphorylation of EGFR with subsequent inhibition of the downstream signaling pathways involving RAS/extracellular signal regulated kinase (ERK)1/2 and phosphoinositide 3-kinase (PI3K)/AKT, and show favorable activity in NSCLC patients with activating mutations of EGFR [3]. However, This is an open-access article distributed under the terms of the Creative Com- mons Attribution-NonCommercial-No Derivative Works License, which permits non-commercial use, distribution, and reproduction in any medium, provided the original author and source are credited. Corresponding author at: Product Research Department, Kamakura Research Laboratories, Chugai Pharmaceutical Co., Ltd., 200 Kajiwara, Kamakura, Kanagawa 247-8530, Japan. Tel.: +81 467 47 6356; fax: +81 467 45 7643. E-mail address: [email protected] (Y. Moriya). almost all patients eventually develop acquired resistance to EGFR- TKIs within several years [4]. Two genetic mechanisms of acquired resistance to EGFR-TKIs have been identified in EGFR-mutated NSCLC. A secondary muta- tion of T790M in exon 20 of EGFR and amplification of the MET oncogene are observed in approximately 50% and 5% of resistant cases, respectively [5–8]. Moreover, Yano et al. showed that over- expression of hepatocyte growth factor (HGF), a ligand for MET, induces acquired resistance by activating MET signals [9]. However, the mechanisms underlying acquired resistance to EGFR-TKIs are unknown in approximately 30% of EGFR-mutated NSCLC patients [8]. Further characterization of these unknown mechanisms is important to develop novel strategies for overcoming acquired resistance to EGFR-TKIs. In the present study, we established novel erlotinib-resistant NSCLC cells with exon 19 deletion of EGFR, and investigated their acquired resistance mechanisms. 2. Materials and methods 2.1. Cell culture and reagents The human NSCLC cell line HCC827 harboring E746-A750 deletion in exon 19 of EGFR was purchased from the American Type Culture Collection (ATCC, Manassas, VA) and maintained in 0169-5002/$ – see front matter © 2013 The Authors. Published by Elsevier Ireland Ltd. All rights reserved. http://dx.doi.org/10.1016/j.lungcan.2013.10.003
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Lung Cancer 83 (2014) 44–50

Contents lists available at ScienceDirect

Lung Cancer

journa l homepage: www.e lsev ier .com/ locate / lungcan

oss of an EGFR-amplified chromosome 7 as a novel mechanism ofcquired resistance to EGFR-TKIs in EGFR-mutated NSCLC cells�

oh Furugaki, Toshiki Iwai, Yoichiro Moriya ∗, Naoki Harada, Kaori Fujimoto-Ouchiroduct Research Department, Kamakura Research Laboratories, Chugai Pharmaceutical Co., Ltd., Japan

r t i c l e i n f o

rticle history:eceived 11 June 2013eceived in revised form0 September 2013ccepted 5 October 2013

eywords:rlotinibGFR-TKIutation

a b s t r a c t

Epidermal growth factor receptor tyrosine kinase inhibitors (EGFR-TKIs) show notable effects againstnon-small cell lung cancers (NSCLCs) harboring EGFR-activating mutations. However, almost all patientseventually acquire resistance to EGFR-TKIs. In this study, we established novel erlotinib resistant NSCLCcells and examined their resistant mechanisms. Resistant cells were established in 14, 3, and 0 wellsexposed to 0.1, 1, and 10 �M erlotinib, respectively. The IC50 values of these cells were 47- to 1209-foldhigher than that of the parent cells. No secondary T790M mutation was detected in any resistant cells.However, in 13/17 resistant cells, EGFR copy number was reduced less than approximately one-eighth ofparent cells, and in one resistant cell (B10), >99.99% of the population was EGFR-unamplified cells. Most(97.5%) parent cells showed EGFR amplification, but 2.5% of the population comprised EGFR-unamplified

esistanceon-small cell lung cancerSCLC

cells. An EGFR-unamplified clone (4D8) isolated from parent cells in erlotinib-free normal medium alsoshowed erlotinib resistance comparable to the resistant B10 cells. Loss of an EGFR-amplified chromosome7 (EGFR-ampch7) was observed in 4D8 and B10 cells. EGFR-unamplified cells were constantly maintainedas a minor population of the parent cells under normal cell culture conditions. In conclusion, loss ofan EGFR-ampch7 causes acquired resistance in EGFR-mutated HCC827 cells exposed to a relatively low

, but©

concentration of erlotinib

. Introduction

Non-small cell lung cancer (NSCLC) is the most common typef lung cancer, accounting for approximately 80% of lung cancers.SCLC is attributed in part to somatic mutations of the epider-al growth factor receptor gene (EGFR) [1]. The most commonutations are an in-frame E746-A750 deletion in exon 19 andsingle-point substitutional L858R mutation in exon 21, both

f which are located in the tyrosine kinase domain of EGFR.hese two mutations are observed in approximately 90% of EGFRutations and are termed “activating mutations” [2]. EGFR-TKIs,

uch as gefitinib and erlotinib, block autophosphorylation of EGFRith subsequent inhibition of the downstream signaling pathways

nvolving RAS/extracellular signal regulated kinase (ERK)1/2 andhosphoinositide 3-kinase (PI3K)/AKT, and show favorable activity

n NSCLC patients with activating mutations of EGFR [3]. However,

� This is an open-access article distributed under the terms of the Creative Com-ons Attribution-NonCommercial-No Derivative Works License, which permits

on-commercial use, distribution, and reproduction in any medium, provided theriginal author and source are credited.∗ Corresponding author at: Product Research Department, Kamakura Researchaboratories, Chugai Pharmaceutical Co., Ltd., 200 Kajiwara, Kamakura, Kanagawa47-8530, Japan. Tel.: +81 467 47 6356; fax: +81 467 45 7643.

E-mail address: [email protected] (Y. Moriya).

169-5002/$ – see front matter © 2013 The Authors. Published by Elsevier Ireland Ltd. Alttp://dx.doi.org/10.1016/j.lungcan.2013.10.003

a high concentration prevents the emergence of resistance.2013 The Authors. Published by Elsevier Ireland Ltd. All rights reserved.

almost all patients eventually develop acquired resistance to EGFR-TKIs within several years [4].

Two genetic mechanisms of acquired resistance to EGFR-TKIshave been identified in EGFR-mutated NSCLC. A secondary muta-tion of T790M in exon 20 of EGFR and amplification of the METoncogene are observed in approximately 50% and 5% of resistantcases, respectively [5–8]. Moreover, Yano et al. showed that over-expression of hepatocyte growth factor (HGF), a ligand for MET,induces acquired resistance by activating MET signals [9]. However,the mechanisms underlying acquired resistance to EGFR-TKIs areunknown in approximately 30% of EGFR-mutated NSCLC patients[8]. Further characterization of these unknown mechanisms isimportant to develop novel strategies for overcoming acquiredresistance to EGFR-TKIs.

In the present study, we established novel erlotinib-resistantNSCLC cells with exon 19 deletion of EGFR, and investigated theiracquired resistance mechanisms.

2. Materials and methods

2.1. Cell culture and reagents

The human NSCLC cell line HCC827 harboring E746-A750deletion in exon 19 of EGFR was purchased from the AmericanType Culture Collection (ATCC, Manassas, VA) and maintained in

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PMI1640 (Sigma-Aldrich Co., Ltd., St. Louis, MO) supplementedith 10% FBS (Japan Bio Serum Co., Ltd., Fukuyama, Japan) at 37 ◦C in

% CO2. Erlotinib was provided by F. Hoffman-La Roche Ltd. (Basel,witzerland) and was dissolved in DMSO. A single cell was isolatedrom a cell suspension under a light microscope using PicopipetAltair, Tokyo, Japan) according to the manufacturer’s instructionsnd expanded for further analysis.

.2. Cell proliferation assay

Cells were seeded in 96-well plates and the following dayrlotinib was added at the indicated concentrations. After 4 days,he viability was determined by crystal violet assay, as describedreviously [10].

.3. Immunoblotting

Immunoblotting was performed as described previously [11].riefly, cells were lysed in lysis buffer, and the 20 �g protein lysatesere separated on a 7.5% SDS-PAGE gel and then transferred onto

he membrane. Antibodies against EGFR, phospho-EGFR (Y1068),RK, phospho-ERK, AKT, phospho-AKT (S473) (Cell Signaling Tech-ology, Inc., Danvers, MA) and �-actin (Sigma–Aldrich) were used.

.4. Generation of erlotinib-resistant cells

The 3 × 102 cells/well were seeded in 96-well plates, and wereultured in the presence of 0.1, 1, or 10 �M erlotinib for 3 months.he resistant cells in each well were isolated and maintained in cul-ure medium supplemented with the corresponding concentrationf erlotinib.

.5. Copy number analysis

Genomic DNA was obtained from the cells using a DNeasylood&Tissue kit (QIAGEN, Valencia, CA). Copy numbers of EGFRnd MET were determined using quantitative real-time PCR anal-sis with a LightCycler 480 System (Roche Diagnostics, Ltd., Basel,witzerland) and LightCycler 480 SYBR Green I Master (Roche Diag-ostics) in accordance with the manufacturer’s instructions andormalized with ˇ-globin. Human genomic DNA (Promega, Madi-on, WI) was used as diploid control DNA.

.6. Direct sequencing analysis

PCR primers and sequencing primers for exon 19 and exon 20 ofGFR are listed in Supplementary Table 1. The PCR products wereequenced directly using a BigDye Terminator v3.1 Cycle Sequenc-ng kit (Life Technologies Co., Ltd., Carlsbad, CA) with an ABI PRISM100 genetic analyzer according to the manufacturer’s instructions.

.7. Melting curve analysis

Melting curve analysis was performed as described previously12]. In brief, to analyze the E746-A750 mutation status, exon 19f EGFR was amplified by PCR from DNA using the appropriaterimers and the LightCycler 480 Genotyping Master (Roche Diag-ostics), and then hybridized using sensor and anchor probes. Therimers and probes are listed in Supplementary Table 1. Plasmidsontaining wild-type or E746-A750 mutation sequences were useds standard DNA.

.8. HGF expression analysis

cDNA was synthesized by using a CellAmp Direct RNA Prepit (TAKARA, Shiga, Japan). Real-time RT-PCR was performed to

cer 83 (2014) 44–50 45

examine the HGF mRNA expression level using the LightCycler sys-tem and Applied Biosystems Assay-on-Demand primer probe sets,Mm00441908m1 (Life Technologies).

2.9. Fluorescence in situ hybridization

Fluorescence in situ hybridization (FISH) for EGFR and the cen-tromere of chromosome 7 was performed using the VysisTM LSIEGFR SpectrumOrange/CEP7 SpectrumGreen Probe (Abott, Prince-ton, NJ) according to the manufacturer’s instructions. This LSI EGFRprobe detects wild-type as well as E746-A750 mutations of EGFR.To determine the ratio of EGFR-unamplified cells to total cells, 1000cells were analyzed and counted. Data are shown as the mean oftriplicate replications.

2.10. G-banded chromosome 7 analysis

Karyotypes of chromosome 7 were analyzed using Giemsastaining of metaphase spreads using standard methods [13].Chromosomal identification and karyotypic designation were per-formed in accordance with ISCN 2009 guidelines [14].

3. Results

3.1. Exposure to a low concentration of erlotinib generateserlotinib-resistant HCC827 cells

Erlotinib inhibited HCC827 cell proliferation in a dose-dependent manner, with the IC50 value of 0.0071 �M (Fig. 1A).Erlotinib markedly blocked not only EGFR phosphorylation, butalso ERK and AKT phosphorylation; the downstream kinases ofEGFR signaling cascades (Fig. 1B). To examine the effect of erlotinibconcentrations on the acquisition of resistance, HCC827 cells wereexposed to 0.1, 1, or 10 �M of erlotinib for 3 months in 96-wellplates, as described in the Materials and Methods section. Erlotinib-resistant cells were generated in 14 out of 96 wells by exposureto 0.1 �M erlotinib and in 3 out of 96 wells by exposure to 1 �Merlotinib (Supplementary Fig. 1A and Table 1). The IC50 values ofthe resistant cells were 47- to 1209-fold higher than that of theparent cells. In addition, the induction of apoptosis by erlotinib wasmarkedly decreased compared with that of the parent cells (Sup-plementary Fig. 1B). No resistant cells appeared in wells exposedto 10 �M erlotinib.

Next, we investigated the mechanisms by which the parent cellsacquired resistance to erlotinib (Table 1). No secondary mutationof T790M in exon 20 of EGFR or no expression of HGF mRNA wasdetected in any of the erlotinib-resistant cells. An approximately3-fold amplification of MET was detected in E10 resistant cells com-pared with the parent cells. In addition, we found that the parentcells had 82 copies of EGFR, whereas 13 out of the 17 resistant cellshad less than 10 copies of EGFR.

3.2. EGFR-unamplified clone 4D8 isolated from parent cells innormal cell culture medium without erlotinib is resistant toerlotinib

We found that HCC827 parent cells were classified into twopopulations: 97.5% were EGFR-amplified cells and 2.5% were EGFR-unamplified cells (Fig. 2A). We next isolated the EGFR-unamplifiedclone 4D8 from parent cells cultured in normal medium without

erlotinib by single cell cloning. The clone 4D8 had 3.3 copies ofEGFR and was resistant to erlotinib (IC50: 0.76 �M) (Fig. 2B and C).In addition, the levels of expression and phosphorylation of EGFR in4D8 were markedly decreased compared with the parent cells, and

46 K. Furugaki et al. / Lung Cancer 83 (2014) 44–50

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ig. 1. Generation of erlotinib-resistant cells from HCC827 cells. (A) Parent cells wey Crystal Violet assay. Each point represents the mean + SD of triplicates. (B) Immu

he phosphorylation of AKT and ERK was not completely inhibitedven by treatment with 1 �M of erlotinib (Figs. 1B and 2D).

.3. Loss of an EGFR-amplified chromosome 7 (EGFR-ampch7)ccurs constantly and leads to the emergence ofGFR-unamplified cells in the population of parent cells

Metaphase analysis demonstrated that almost all EGFR-mplified parent cells had four chromosome 7 s. Three of themontained a single copy of EGFR and the other contained multipleopies of EGFR (EGFR-ampch7) (Fig. 3A). By G-banded karyotypenalysis of chromosome 7, we found that the EGFR-amplified par-

nt cells had four different type of chromosome 7 s (n, a, b and c)nd clone 4D8 had three different type of chromosome 7 s (n, b,nd c) (Fig. 3B). Since the chromosome 7 s (n, b and c) other thanGFR-ampch7 (a) were shared with both parent cells and clone

able 1haracterization of parent cells and erlotinib-resistant cells.

Cells Erlotinib IC50 (�M) Exon20 of EGFRsequence

He

Parent cells 0.0071 WT N0.1 �Merlotinib-resistant cells

F5 1.5 WT NE6 0.47 WT NA5 0.98 WT NB10 0.68 WT ND11 2.0 WT NE10 7.3 WT NG1 0.33 WT NB4 2.0 WT NG3 0.47 WT NB7 0.34 WT NG4 4.0 WT NG9 0.40 WT NE9 1.7 WT NA2 0.51 WT N

1 �Merlotinib-resistant cells

A10 1.8 WT NF9 8.5 WT NG7 1.8 WT N

ells were evaluated for erlotinib sensitivity, T790M mutational status, HGF mRNA expresf exon 19, WT: wild-type. Each copy number represents the mean of triplicate assays.

ltured in the presence of erlotinib for 4 days, and the proliferation was determinedts of cell lysates from cells treated with or without erlotinib for 3 h.

4D8, it can be considered that clone 4D8 was emerged by loss ofan EGFR-ampch7 in EGFR-amplified parent cells.

Next, we determined whether the EGFR-unamplified cellswere originally present in the parent cell population and evenlyproliferated as EGFR-amplified cells, or whether these emergedconstantly as part of the parent cell population under nor-mal cell culture conditions. For this purpose, we isolated andexpanded two EGFR-amplified clones, 3B4 and 4F7, from theparent cells, and found that these clones contain 2.5% and1.0% of EGFR-unamplified cells, respectively (Fig. 3C and Supple-mentary Table 2). Furthermore, we isolated two EGFR-amplifiedclones from each of 3B4 and 4F7. These four clones again had0.6–2.4% of EGFR-unamplified cells (Supplementary Table 2). These

findings indicate that a small population of EGFR-unamplified cellsemerges constantly in parent cells under normal cell culture con-ditions (without erlotinib) by means of the loss of an EGFR-ampch7in EGFR-amplified cells.

GF mRNAxpression

MET copy number Exon19 of EGFRsequence

EGFR copy number

.D. 3.9 DEL 82

.D. 2.1 DEL/WT 3.4

.D. 4.8 DEL/WT 6.2

.D. 3 DEL/WT 3.0

.D. 3.8 DEL/WT 3.0

.D. 2.2 DEL/WT 3.1

.D. 13 DEL 52

.D. 3.3 DEL/WT 9.7

.D. 1.9 DEL/WT 2.5

.D. 5.7 DEL/WT 6.5

.D. 2 DEL/WT 3.1

.D. 2.6 DEL 21

.D. 2.1 DEL/WT 3.8

.D. 2.7 DEL/WT 3.6

.D. 2.2 DEL/WT 3.4

.D. 4.3 DEL 54

.D. 3 DEL 67

.D. 3.2 DEL/WT 3.6

sion, and MET and EGFR copy number. N.D.: not detected. DEL: E746-A750 deletion

K. Furugaki et al. / Lung Cancer 83 (2014) 44–50 47

Fig. 2. Characteristics of the EGFR-unamplified clone 4D8 isolated from HCC827 parent cells cultured in normal culture medium without erlotinib. (A) FISH analysis of theE d copa ean + Sf SD ofe

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GFR/CEP7 probe set. EGFR, red; CEP7, green. A subset (2.5%) of cells had unamplifienalysis was performed using quantitative real-time PCR. Each bar represents the mor 4 days was determined by crystal violet assay. Each point represents the mean +rlotinib for 3 h.

.4. Erlotinib-resistant B10 and D11 cell populations wereGFR-unamplified cells

The IC50 values of resistant cells B10 and D11 to erlotinib (0.68nd 2.0 �M, respectively) were approximately the same as that oflone 4D8 (0.76 �M). The level of expression and phosphorylationf EGFR in B10 cells were markedly decreased, but the phosphor-lation of AKT and ERK were not completely inhibited by 1 �M ofrlotinib (Fig. 4A) as with clone 4D8. Both of these resistant cells hadhree copies of EGFR, and >99.99% of their populations were clas-ified as EGFR-unamplified because no EGFR-amplified cells wereetected in more than 10,000 cells (Fig. 4B, C and Supplementaryig. 2A and B). By direct sequencing analysis, the parent cells werehown to have only the E746-A750 deletion in exon 19, as describedreviously [15], whereas clone 4D8 and B10 and D11 resistantells contained both the wild-type and the E746-A750 deletionalequences (Fig. 4D). However, by melting curve analysis, we foundhat approximately 2% of the parent cell population had the wild-ype allele and 98% had the E746-A750 deletion allele, whereas inlone 4D8 and B10, D11 resistant cells, approximately 60% of theopulation had the wild-type allele and 40% had the E746-A750eletion allele (Fig. 4E).

. Discussion

Human NSCLC HCC827 cells have an E746-A750 deletion ofxon 19 and are highly sensitive to EGFR-TKIs. In this study, to

ies of EGFR (EGFR-unamplified cells; arrow) in parent cells. (B) EGFR copy numberD of triplicates. (C) Proliferation of parent cells and clone 4D8 treated with erlotinibtriplicates. (D) Immunoblots of cell lysates from clone 4D8 treated with or without

examine novel mechanisms of acquired resistance to EGFR-TKIs,erlotinib-resistant cells were established by continuously expos-ing HCC827 cells to 0.1, 1, or 10 �M of erlotinib. Since clinicallyapplicable erlotinib doses, 25, 100, or 150 mg, lead to maximumplasma concentrations of 0.8, 1.9, and 5.6 �M, respectively [16,17],the exposure concentrations were selected to cover the achievableplasma concentrations of erlotinib (0.8–5.6 �M) in examining therelationship between concentration and resistance acquisition toerlotinib. Erlotinib inhibited the generation of resistant cells in adose-dependent manner. Resistant cells were generated by expo-sure to 0.1 and 1 �M of erlotinib in 14/96 wells and 3/96 wells,respectively. No resistant cells appeared in wells exposed to 10 �Merlotinib. These results suggest that, to prevent acquired resistanceto erlotinib, it is important to keep the plasma concentration ashigh as possible by treating patients with the highest recommendeddose (150 mg) of erlotinib as far as it can be tolerated.

We found that 17 resistant cells obtained were classified intothree groups based on the change in MET or EGFR copy numbercompared with the parent cells: (1) cells having more than 3-foldincrease in MET copy number, (2) cells having nearly-unchangedMET and EGFR copy numbers, (3) cells having less than a halfdecrease in EGFR copy number. The first group included one resis-tant cell (E10) having more than 3-fold increase in MET copy

number. Engelman et al. reported that HCC827 cells developedresistance to gefitinib in vitro as a result of focal amplification ofMET in all six clones isolated [7]. The discrepancy in the incidenceof MET amplified cells between our study (1/17) and Engelman’s

48 K. Furugaki et al. / Lung Cancer 83 (2014) 44–50

Fig. 3. Loss of an EGFR-ampch7 in EGFR-amplified cells. (A) Metaphase FISH analysis of the EGFR/CEP7 probe set. EGFR-amplified cells had an EGFR-ampch7 (arrow). (B)G (p11.F paren

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-banded karyotype analysis of chromosome 7. n, normal chromosome 7; a, add(7)ISH analysis of the EGFR/CEP7 probe set of clone 3B4 isolated from EGFR-amplified

tudy (6/6) may be caused by the different methods for generatingesistant cells. In Engelman’s study cells were exposed to stepwise-ncreased concentration (0.001–0.1 �M) of gefitinib. In contrast,ur method, exposing cells to fixed concentrations of erlotinib (0.1r 1.0 �M), is considered to better mimic clinical settings becauseatients are constantly treated with the recommended dose of anGFR-TKI during the therapy.

The second group included 2 resistant cells (A10 and F9). TheET and EGFR copy numbers of these cells were the closest to the

arent cells in the three groups. No secondary mutation of T790M,GF mRNA over-expression, or KRAS mutations were detected in

hese cells (data not shown). Thus, we did not identify the resis-ance mechanism in this group so far. Further studies are neededo elucidate the mechanism associated with resistance. Severalnown mechanisms such as insulin-like growth factor I recep-or (IGF1R) expression, HER2/HER3 expression, PIK3CA mutations,pithelial–mesenchymal transition (EMT), and small cell lung can-er (SCLC) transformation [8,18] may be candidates.

The third group included 14 resistant cells (other than E10,10, and F9). We proposed a model for the acquired resistance torlotinib in this group (Fig. 5). Even in usual culture condition with-ut erlotinib, HCC827 parent cells maintain EGFR-unamplified cellsy a constant fraction. These cells were generated by the loss of anGFR-ampch7 in EGFR-amplified cells. The levels of expression andhosphorylation of EGFR in EGFR-unamplified cells, such as cloneD8 and resistant cell B10, were drastically decreased comparedith the parent cells, whereas the downstream AKT/ERK phosphor-

lation was not decreased (Supplementary Fig. 3). When exposed toelatively low concentrations of erlotinib (0.1 and 1 �M), the resis-ant cells, namely, the pre-existing EGFR-unamplified cells survivednd proliferated in the parent cell population (Fig. 5).

2); b and c, add(7) (q11.2) with different additional material of unknown origin. (C)t cells. A subset (2.5%) of cells was EGFR-unamplified cells (arrow).

Whether this phenomenon can be found in other cell lines is ofinterest. We found that EGFR exon 19 deleted NSCLC cell line B901Lhas two EGFR-ampch7 and has pre-existing EGFR-unamplified cells(about 0.2%) under normal culture conditions (SupplementaryFig. 4). Although the mechanism associated with the loss of anEGFR-ampch7 with exon 19 deletion in EGFR-amplified cells undernormal culture conditions is unclear, the mutation of EGFR and mul-tiple centromeres in EGFR-ampch7 may cause genetic instability.Copy number gains and mutant allele-specific imbalances such asamplification, polysomy, or uniparental disomy, occur frequentlyin tumor cells with EGFR mutations [19]. In fission yeast, abnormalcentromere function results in a highly elevated rate of chromo-some loss and chromosome missegregation [20]. Furthermore, theproportion of EGFR-unamplified cells in the parent cell populationwas unchanged for 9 months under normal cell culture conditions(2.5% at the start and 2.1% after 9 months; data not shown). Thesefindings indicate that the abnormality of the EGFR-ampch7 maylead to uneven distribution of the chromosome during mitosis notfrequently but constantly.

Although we did not identify the novel addicted oncogenein EGFR-unamplified resistant cells (4D8, B10 or D11), wild-typeEGFR may be a candidate because the proliferation of these cellswas still inhibited by more than approximately 1 �M of erlotinib(Supplementary Fig. 5A). In addition, the erlotinib of correspondingconcentration completely blocks the phosphorylation of wild-typeEGFR [21]. Furthermore, the IC50 value of irreversible EGFR-TKI,afatinib, to 4D8 and D11 cells was approximately 25-fold higher

than that of the parent cells (Supplementary Fig. 5B). In addition,EGFR knockdown by siRNA partially but significantly inhibited cellproliferation in all of three resistant cells (Supplementary Fig. 5 C).These results indicate that EGFR-unamplified resistant cells could

K. Furugaki et al. / Lung Cancer 83 (2014) 44–50 49

Fig. 4. Characteristics of the erlotinib-resistant B10 and D11 cell populations. (A) Immunoblots of cell lysates from erlotinib-resistant B10 cells treated with or withouterlotinib for 3 h. (B and C) FISH analysis of the EGFR/CEP7 probe set of control (B) and metaphase spreads (C). EGFR, red; CEP7, green. (D) Direct sequencing analysis of EGFRexon 19. The underlined sequences of the 4D8 clone, and the B10 and D11 cells contained both the E746-A750 deletion and the wild-type alleles. (E) Melting curve analysisof standard deletion/wild-type plasmids and DNA from cells. Left peaks indicate the wild-type EGFR (arrow). The wild-type peaks of the parent cells and the 4D8 clone andB10 and D11 cells were nearly identical to those of the 2% and 60% wild-type/E746-A750 deletion plasmids, respectively.

Low concentration of EGFR-TKIs

Without EGFR-TKIs

Not acquired resistant cells

Parent cells

EGFR wild-type

EGFR-TKIs resistant cells

Amplified EGFR exon 19 deletion

EGFR exon 19 deletion

Fig. 5. Model for acquired resistance to EGFR-TKIs in EGFR-mutated HCC827 cells. A small population of EGFR-unamplified cells is constantly maintained in the parentcell population by the loss of an EGFR-ampch7 with exon 19 deletion in EGFR-amplified cells under normal cell culture conditions in HCC827 cells (without EGFR-TKIs).Resistant cells are generated by pre-existing EGFR-unamplified cells being selected at low concentrations of EGFR-TKIs. High concentrations of EGFR-TKIs completely inhibitthe proliferation of not only EGFR-amplified cells, but also EGFR-unamplified cells. EGFR-amplified cells have three types of chromosome 7 s; approximately 80 copies of exon19 deletion EGFR (EGFR-ampch7), single-copy of exon 19 deletion EGFR and wild-type EGFR. EGFR-unamplified cells have two types of chromosome 7 s; single-copy of exon19 deletion EGFR and wild-type EGFR.

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avorably change the addiction from delE746-A750 EGFR to thether growth drivers including wild-type EGFR even in the presencef one or two copies of delE746-A750 EGFR. HER family receptorinases may be another candidates. Tabara et al. have shown thatomplete loss of the activating EGFR mutant gene results in theain of a novel addiction to HER2/HER3 signaling and the acquisi-ion of EGFR-TKI resistance in vitro [22]. In our resistant cells (4D8nd B10), cell proliferation was partially blocked by HER2 or HER3nockdown (Supplementary Fig. 6). These findings indicate that theGFR-unamplified resistant cells partially depend on not only EGFRut also HER2/HER3 signaling for survival.

Compared with other solid tumors, NSCLC is well known forhe heterogeneity of the cell populations in individual lesions23]. Heterogeneous distribution of EGFR mutations in individualumors has also been reported [24–26]. In addition, loss of an EGFR

utation is reported in 3 out of 11 EGFR-mutated NSCLC patientsith progressive disease after gefitinib treatment [22]. These find-

ngs indicate that some NSCLCs are genetically heterogeneous andoncurrently have tumor cell populations with either mutant orild-type EGFR, and that the EGFR genetic heterogeneity might con-

ribute to acquired resistance to EGFR-TKIs. Our results stronglyupport this mechanism of resistance, because we have clearlyhown that the genetic heterogeneity of EGFR is constantly main-ained by the loss of an EGFR-ampch7 in NSCLC cells with EGFR

utations.In conclusion, we demonstrated that loss of amplified EGFR-

utated genes causes acquired resistance in HCC827 cells whenhe cells are exposed to a relatively low concentration of erlotinib,hereas high concentration of erlotinib prevents the emergence of

esistance. In addition to the major known mechanisms of acquiredesistance to EGFR-TKIs, including secondary mutation of T790M,mplification of MET, mutations of PIK3CA, EMT, and transformationo SCLC [8], our findings propose a novel acquired resistant mecha-ism, namely, the selection of preexisting EGFR-unamplified cells,hich are generated by the loss of an amplified EGFR-mutated gene,ay contribute to the acquired resistance to EGFR-TKIs. Further

tudies are needed to identify alternative addictive signal path-ay(s) after the loss of amplified EGFR with mutation and to lead

o the development of a novel molecular targeted therapy againstGFR-TKI-refractory NSCLC.

onflict of interest statement

None.

cknowledgements

The authors thank Kumiko Kondoh, Hiromi Sawamura andasako Takahashi for technical assistance in the experiments, and

lso thank Kazushige Mori, Naohito Inagaki, Masamichi Sugimotond Keiji Kosaka for support and special advice in this study.

ppendix A. Supplementary data

Supplementary material related to this article can be found,n the online version, at http://dx.doi.org/10.1016/j.lungcan.013.10.003.

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