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Lucidi Duino 11 - ELETTRA

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Paolo Fornasini Dipartimento di Fisica Università di Trento
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Page 1: Lucidi Duino 11 - ELETTRA

Paolo Fornasini Dipartimento di Fisica Università di Trento

Page 2: Lucidi Duino 11 - ELETTRA

Basic attenuation mechanisms for X-rays Paolo Fornasini

Univ. Trento

outgoing beam

hν '

hνF

E

EA

Elastic scattering

Inelastic scattering

Photo-electrons

Auger electrons

Fluorescence Absorption

Scattering

Beam attenuation Incoming beam

Page 3: Lucidi Duino 11 - ELETTRA

X-RAYS and X-ray techniques Paolo Fornasini

Univ. Trento

X-rays

10-12 10-10 10-8 10-6 10-4 10-2 1 Å 1 µm

λ (m)

U.V. I.R.

E[keV] = 12.4λ[Å]

Scattering

Bragg angle

Inte

nsity

λ = 2dsinθ

Spectroscopy

Abso

rptio

nEnergy

Imaging

Page 4: Lucidi Duino 11 - ELETTRA

Structural techniques

Scattering

Paolo Fornasini

Univ. Trento

X-rays

Neutrons

Spectroscopy

Abso

rptio

n

Energy

XAFS

Long-range order Short-range order

Page 5: Lucidi Duino 11 - ELETTRA

•  X-rays absorption – phenomenology •  X-rays absorption - theory •  EXAFS: theoretical background •  EXAFS experiments •  EXAFS: data analysis, examples

Page 6: Lucidi Duino 11 - ELETTRA

X-rays absorption - phenomenology

X-rays, 1897

Page 7: Lucidi Duino 11 - ELETTRA

Attenuation of X-rays Paolo Fornasini

Univ. Trento

source monochromator

x

sample

detectors

Φ0 Φ

Φ = Φ0 exp −µ ω( ) x[ ]

µ ω( ) =1xlnΦ0

Φ

Exponential attenuation

Attenuation coefficient

Page 8: Lucidi Duino 11 - ELETTRA

Atomic cross sections Paolo Fornasini

Univ. Trento

10-15

10-10

10-5

10-2 100 102 104 106

Cro

ss s

ectio

n (

Å2 )

E (keV)

Photoelectric absorption

Coherent sc.

Incoherent sc.

Pair prod.nucl. field

elec. field

32 - Ge

µ ω( ) =NaρA

µa ω( )

Page 9: Lucidi Duino 11 - ELETTRA

Photo-electric absorption Paolo Fornasini

Univ. Trento

100

101

102

103

104

1 10 100

µ/ρ (cm2/g)

60-Nd, 65-Tb, 70-Yb

hω (keV)

K

L1-3

M1-5

100

102

104

106

1 10 100

µ/ρ (cm2/g)

Photon energy (keV)

τ

σc

σi

32 - Ge

Edges

τ ω( )∝ Z 4

ω( )3

+

Page 10: Lucidi Duino 11 - ELETTRA

Excitation and ionization

-10000

-8000

-6000

-4000

-2000

0

Ep (eV)

- 13,6

- 3,4

0 Ep (eV)

1- Hydrogen 29 - Copper

Paolo Fornasini

Univ. Trento

unoccupied free-levels

unoccupied free-levels

unoccupied bound-levels

Page 11: Lucidi Duino 11 - ELETTRA

Absorption edges

100

101

102

103

104

1 10 100

µ/ρ (cm2/g)

60-Nd, 65-Tb, 70-Yb

hω (keV)

K

L1-3

M1-5

Z > 9 Z > 29

L1 2s

L2 2p1/2 L3 2p3/2

K 1s

M1 3s M3 3p3/2

M2 3p1/2 M4 3d3/2 M5 3d5/2

Paolo Fornasini

Univ. Trento

1

10

100

0 20 40 60 80 100

Bind

ing

ener

gy (k

eV)

Z

K

L3

M5

Page 12: Lucidi Duino 11 - ELETTRA

Physical Review 16, 202 (1920)

Absorption edge fine structure

Page 13: Lucidi Duino 11 - ELETTRA

Atomic gases: edge fine structure

-6 -4 -2 0 2

µ (a

.u.)

E - Eb (eV)

Ar Eb = 3205.9 eV

Paolo Fornasini

Univ. Trento

Core level Unoccupied bound levels (Rydberg levels)

L. G. Parrat, Phys. Rev. 56, 295 (1939)

Page 14: Lucidi Duino 11 - ELETTRA

Atomic gases: smooth absorption coefficient

14.2 14.5 14.8 15.1Photon energy (keV)

µ (a

.u.)

Kr

Paolo Fornasini

Univ. Trento

Core level Unoccupied free levels (continuum)

Edge Extended region

Page 15: Lucidi Duino 11 - ELETTRA

Molecular gases: Fine structure Paolo

Fornasini Univ. Trento

Abso

rptio

n In

tens

ity (

arb

. Uni

ts)

K-shell - gas-phase N2

x10

400 405 410 415 420 Photon energy (eV)

Core level Unoccupied bound levels Unoccupied free levels

C.T. Chen and F. Sette, Phys. Rev. A 40 (1989)

Vibrational levels

Rydberg series

Double excit.

Shape reson.

Page 16: Lucidi Duino 11 - ELETTRA

Condensed systems: Fine structure

11 11.5 12Photon energy (keV)

Ge

µ (a

.u.)

Paolo Fornasini

Univ. Trento

Core level Unoccupied bound levels Unoccupied free levels

Edge

Extended region

Page 17: Lucidi Duino 11 - ELETTRA

XAFS: X-ray Absorption Fine Structure

X-ray Absorption Near Edge StructureNear Edge X-ray Absorption Fine Structure

Paolo Fornasini

Univ. Trento

11 11.5 12Photon energy (keV)

XANESNEXAFS

EXAFS

Edge

Extended X-ray AbsorptionFine Structure

Page 18: Lucidi Duino 11 - ELETTRA

XAFS: edge and pre-edge

5 4.98 4.96 5.02 5.04 Photon energy (keV)

Edge Pre-edge

Page 19: Lucidi Duino 11 - ELETTRA

Lectures on XAFS

EXAFS •  introduction •  basic theory •  experiments •  data analysis

P. Fornasini

XANES phenomenological approach

C. Meneghini

XAFS multiple scattering approach

M. Benfatto

Applications

XAFS & Materials science F. Boscherini

SR & Earth science S. Quartieri

SR & Cultural heritage S. Quartieri

SR & Chemistry A. Martorana

SR & Environmental science P. Lattanzi

Page 20: Lucidi Duino 11 - ELETTRA

X-rays absorption - theory

Page 21: Lucidi Duino 11 - ELETTRA

X-ray attenuation

• Linear attenuation coefficient

• Mass attenuation coefficient

µρ=Na

Aµ a

Elements:

µρ

tot

= xµρ

P

APM

+ yµρ

Q

AQM

+ …

Ai = atomic weights, M = molecular weight

Chemical compounds PxQy...

x

Φ0 Φ

Energy density u = ε0E02

2=ε0ω

2A02

2

µ ω( ) = −1ududx

=1xlnΦ0

Φ=NaρA

µ a ω( )

Na = Avogadro numberA = atomic weightr = mass density

µa = atomic cross section

Paolo Fornasini

Univ. Trento

Page 22: Lucidi Duino 11 - ELETTRA

Absorption coefficient

Pif = ?

Paolo Fornasini

Univ. Trento

Absorption coefficient

Atomic density

Vector potential amplitude

Transition probability per unit time

i = initial ground state f = final excited states

E f − Ei = ω

µ ω( ) =2

ε0ωA02 n

dPifdtf

Page 23: Lucidi Duino 11 - ELETTRA

Radiation-matter interaction

Pif = ?

Initial atomic state

Stationary ground state Ψi

Final atomic state

Stationary excited state Ψf

Interaction

Ψ t( )

Paolo Fornasini

Univ. Trento

Page 24: Lucidi Duino 11 - ELETTRA

Perturbation approach

Paolo Fornasini

Univ. Trento

System = atom (quantum treatment)

Weak perturbation = electromagnetic field (classical treatment)

Page 25: Lucidi Duino 11 - ELETTRA

Hamiltonian for atom in e.m. field Paolo Fornasini

Univ. Trento

∇ ⋅ A =0

Φ = 0 J = 0

Radiation gauge

E = ∂

A /∂t

B = ∇ × A

∇ ⋅ A = A ⋅ ∇

Vector potential

H =12m

p j − q A r j ,t( )[ ]

2−

qm s j ⋅ B r j ,t( )

j

∑ + V r 1… r N( )

=p j2

2m+ V r 1…

r N( )

j∑ +

em p j ⋅ A r j ,t( ) +

em s j ⋅ B r j ,t( ) +

e2

2mA2 r j ,t( )

j∑

H0

HI

Unperturbed Interaction

e-e and e-p interact.

Sum over electrons Electron

spin

q = −e < 0

Page 26: Lucidi Duino 11 - ELETTRA

Interaction Hamiltonian

Sum over electrons

A = Re A0 ˆ η ei(

k ⋅ r −ωt )[ ]

Paolo Fornasini

Univ. Trento

HI =em p j ⋅ A r j ,t( ) +

em s j ⋅ B r j ,t( ) +

e2

2mA2 r j ,t( )

j∑

Relevant terms

Time dependence:

sinusoidal perturbation frequency ω

Page 27: Lucidi Duino 11 - ELETTRA

Transition to continuum states Paolo Fornasini

Univ. Trento Time dependent perturbation theory

Ψi

Ψf

Paolo Fornasini

Univ. Trento

dE f

Density of states

dPifdE f

= ρ(E f ) Ψf HI Ψi

2t δ E f − Ei − ω( ) 2π

Probability density

Time Energy conservation

1st-order perturbation

Transition to continuum states

Page 28: Lucidi Duino 11 - ELETTRA

''Golden rule''

HI =em p j ⋅ A rj ,t( )

j∑

wif =πe2

m2 Ao2

Ψi ei k ⋅ r j ˆ η ⋅ ∇ jj∑ Ψf

2ρ E f( ) δ E f − Ei − ω( )

A = Re A0 ˆ η ei

k ⋅ r [ ]

Paolo Fornasini

Univ. Trento

wif =dPifdE f dt

= ρ(E f ) Ψf HI Ψi

2δ E f − Ei − ω( ) 2π

Probability density per unit time

Page 29: Lucidi Duino 11 - ELETTRA

Golden rule

Initial atomic state

Stationary ground state Ψi

Final atomic state

Stationary excited state ΨfInteraction

with e.m. field

HI

Time-dependent perturbation theory (1st-order)

matrix element density of final states

wif ∝ Ψi HI Ψf

2ρ E f( )

Paolo Fornasini

Univ. Trento

E f − Ei = ω

Page 30: Lucidi Duino 11 - ELETTRA

One-electron approximation

µtot ω( ) = µ el ω( ) + µinel ω( )

•  1 core electron excited •  N-1 passive electrons relaxed

•  1 core electron excited •  Other electrons excited

EXAFS coherent signal

µel ω( )∝ ΨiN−1ψ i ei

k ⋅ r ˆ η ⋅ p ψ fΨf

N−12ρ ε f( )

Paolo Fornasini

Univ. Trento

Page 31: Lucidi Duino 11 - ELETTRA

Electric dipole approximation

µel ω( ) ∝ ΨiN−1ψ i ˆ η ⋅

r ψ fΨf

N−12

ei k ⋅ r = 1+ i

k ⋅ r −… ≈ 1

HI ∝ ei k ⋅ r ˆ η ⋅ p ≈ ˆ η ⋅

p = ω 2 ˆ η ⋅ r

Δ = ± 1 Δs = 0Δj = 0,±1, Δm = 0,± 1

Dipole selection rules:

Paolo Fornasini

Univ. Trento

Page 32: Lucidi Duino 11 - ELETTRA

Validity of dipole approximation Paolo Fornasini

Univ. Trento

ei k ⋅ r = 1+ i

k ⋅ r −… ≈ 1

λ >> 2πr ⇔ kr <<1

0.0

0.1

0.2

0.3

10 30 50 70

K edgekr

Z€

r ≈ a0Z

a0 = 0.53Å( )

λ ≈1Z 2

1s orbital - K edge

Page 33: Lucidi Duino 11 - ELETTRA

Beyond the electric dipole approximation Paolo

Fornasini Univ. Trento

HI =em p j ⋅ A r j ,t( ) +

em s j ⋅ B r j ,t( ) +

e2

2mA2 r j ,t( )

For one electron:

Electric dipole

Electric quadrupole Magnetic dipole

Spin magnetic moment

Orbital magnetic moment

2-photon processes

ei k ⋅ r = 1+ i

k ⋅ r −…

Page 34: Lucidi Duino 11 - ELETTRA

µel ω( )∝ ψi ˆ η ⋅ r ψ f

2ρ ε f( ) Ψi

N−1 ΨfN−1 2

Sudden approximation

ΨN −1ψ = Ψ N −1 ψ

1 active electron N-1 passive electrons

S02 ≈ 0.6 ÷ 0.9

Structuralinformation

No interaction between photoelectron and passive electrons

Paolo Fornasini

Univ. Trento

Page 35: Lucidi Duino 11 - ELETTRA

The final state

ψ f

Molecular orbitals theories

Band theories

Multiple scattering approach

Single scattering approximation

Fine structure

ψ f

11 11.5 12Photon energy (keV)

Ge

µ (a

.u.)

Basic EXAFS mechanism

at the core site

Page 36: Lucidi Duino 11 - ELETTRA

EXAFS: the mechanism

Superpositionat the core site.

Photo-electron propagation.

Photo-electron back-scattering.

B

A

X-ray photon absorption.Photo-electron emission.

Modulation ofabsorption coefficient -0.4

0.0

0.4

0 5 10 15 20

k χ(k)

Photo-electron wavenumber (Å-1)

Paolo Fornasini

Univ. Trento

Page 37: Lucidi Duino 11 - ELETTRA

De-excitation mechanisms

Radiative: fluorescence

Non-radiative: Auger

X e-

X

X e- e-

X

A

0

0.2

0.4

0.6

0.8

1

0 20 40 60 80 100

η

Z

ηK

ηL

ηM

Fluorescence yield

η =X

X + A

Paolo Fornasini

Univ. Trento

Page 38: Lucidi Duino 11 - ELETTRA

Core-hole lifetime

0

5

10

15

20

20 40 60 80

Γh (eV)

Z

K edges

L3 edges

Lifetime of the excited stateτh~10-16 -10-15 s

Energy width of the excited state

Γh

τh ≈1/Γh

Contribution tophoto-electron life-time

τh

Energy resolutionof XAFS spectra

Γh

Paolo Fornasini

Univ. Trento

Page 39: Lucidi Duino 11 - ELETTRA

EXAFS: theoretical background

Page 40: Lucidi Duino 11 - ELETTRA

2m2 hν − Eb( ) =

2m2 ε = k =

2πλ

Photon → photo-electron

0

1

2

11 11.5 12hν (keV)

µx

Photon energy Photo-electron wavenumber

0 5 10 15k (Å-1)

χ (k)

Paolo Fornasini

Univ. Trento

Page 41: Lucidi Duino 11 - ELETTRA

Angular emission of photo-electron Paolo Fornasini

Univ. Trento

Photoelectron emission

Photon polarisation

θ

asimmetry parameter

N(θ)∝1+β23cos2θ −1( )

θ

ˆ η

N(θ) ∝ 3cos2θ = 3 ˆ η ⋅ ˆ r 2€

β = 2Emission from s orbitals

Page 42: Lucidi Duino 11 - ELETTRA

Photo-electron parameters

0

5

10

15

20

0 500 1000 1500

k (Å

-1)

εf (eV)0

1

2

3

0 500 1000 1500

λ (Å

)

εf (eV)

Wave-number Wave-length

Energy

Paolo Fornasini

Univ. Trento

Page 43: Lucidi Duino 11 - ELETTRA

EXAFS normalisation

µ ω( )∝ ψ i ˆ η ⋅ r ψ f

2

µ0

χ(k) =µ − µ 0

µ 0

µ

µ0 ω( )∝ ψ i ˆ η ⋅ r ψ f

0 2

Paolo Fornasini

Univ. Trento

Page 44: Lucidi Duino 11 - ELETTRA

The EXAFS function (a)

-0.06

-0.03

0

0.03

0.06

0 4 8 12 16k (Å-1)

χ (k)

µ0 ω( )∝ ψ i ˆ η ⋅ r ψ f

0 2

µ ω( )∝ ψ i ˆ η ⋅ r ψ f

2 ?

ψ f = ψ f0 + δψ f

(weak interaction) €

χ(k) =µ − µ 0

µ 0

Paolo Fornasini

Univ. Trento

Page 45: Lucidi Duino 11 - ELETTRA

The EXAFS function (b)

-0.06

-0.03

0

0.03

0.06

0 4 8 12 16k (Å-1)

χ (k)

?

χ(k) =µ − µ 0

µ 0

Quantum states → wavefunctions

χ k( ) =2Re d r ψi ˆ η ⋅

r ψ f0*( )∫ ψi

* ˆ η ⋅ r δψ f( )

d r ψi* ˆ η ⋅ r ψ f

0∫2

Core orbital = source & detector

Paolo Fornasini

Univ. Trento

Page 46: Lucidi Duino 11 - ELETTRA

EXAFS: Two-atomic system (a)

•  Scattering theory in plane-wave approximation

•  Muffin tin potential

Paolo Fornasini

Univ. Trento

R

II I III

Absorber Scatterer

δψ f ∝ψ f0 i eiδ

exp ikR( )2kR

f k,π( )exp ikR( )

Reiδ

At the absorber core site

Propagators

Interaction

Page 47: Lucidi Duino 11 - ELETTRA

δψ f ∝ψ f0 i eiδ

exp ikR( )2kR

f k,π( )exp ikR( )

Reiδ

EXAFS: Two-atomic system (b)

χ k( ) = 3 ˆ η ⋅ ˆ R 2 1

kR2 Im f k,π( ) exp 2iδ1( ) exp 2ikR( )[ ]

spherical wave attenuation

back & forth path

central atom phase-shift

back-scattering amplitude

polarisation

Paolo Fornasini

Univ. Trento

χ k( ) =2Re d r ψi ˆ η ⋅

r ψ f0*( )∫ ψi

* ˆ η ⋅ r δψ f( )

d r ψi* ˆ η ⋅ r ψ f

0∫2

Page 48: Lucidi Duino 11 - ELETTRA

Basic interference effect

χ k( ) = 3 ˆ η ⋅ R 1

kR2 Im f k,π( ) exp 2iδ1( ) exp 2ikR( )[ ]

χ k( ) = 3 ˆ η ⋅ ˆ R 2 1

kR2 f k,π( ) sin 2kR + φ k( )[ ]€

f k,π( ) e2iδ = f k,π( ) eiφ

0 5 10 15 20k (Å-1)

R = 2 Å

R = 4 Å

R

EXAFS frequency

Inter-atomic distance

Paolo Fornasini

Univ. Trento

Page 49: Lucidi Duino 11 - ELETTRA

Amplitudes and phase-shifts

[Calculated by FEFF 6.01] Z dependence

Central-atom Back-scattering

Amplitude Phase-shift Phase-shift

Paolo Fornasini

Univ. Trento

0.0

0.2

0.4

0.6

0.8

0 5 10 15 20

Back-scattering amplitude(a.u.)

k (Å-1)

6 - C

32 - Ge

78 - Pt

-25

-20

-15

-10

-5

0

0 5 10 15 20k (Å-1)

32 - Ge

6 - C

78 - Pt

Back-scattering phase-shift(rad)

-2

0

2

4

6

0 5 10 15 20k

32 - Ge

78 - Pt

6 - C

Central atom phase-shift

k (Å-1)

(rad)

Page 50: Lucidi Duino 11 - ELETTRA

Many-atomic systems Paolo Fornasini

Univ. Trento

r

Radial Distribution Functions

r

Coordination shells

Crystals Amorphous systems

Page 51: Lucidi Duino 11 - ELETTRA

Coordination shells

Coordination shells

Coordination number

χ k( ) =1k

Nsshell∑ Im fs k,π( ) e2iδ1 1

Rs2 exp 2ikRs( )

3 ˆ η ⋅ ˆ R 2

=1Isotropic samples:

Paolo Fornasini

Univ. Trento

χ k( ) = 3 ˆ η ⋅ R 1

kR2 Im f k,π( ) e2iδ1 exp 2ikR( )[ ]

Page 52: Lucidi Duino 11 - ELETTRA

Single and multiple scattering

SS = Single scattering MS = Multiple scattering

Scattering paths

Paolo Fornasini

Univ. Trento

Page 53: Lucidi Duino 11 - ELETTRA

Multiple scattering series

Multiple Scattering ( ) ( ) ( ) ( ) ( )[ ]…++++= kkkkk 4320 1 χχχµµ

Single Scattering χ k( ) =µ − µ0µ0

( ) ( ) ( )[ ]kkk χµµ += 10

Paolo Fornasini

Univ. Trento

0

1

2

11 11.5 12Photon energy hν (keV)

µxµ0x

Es

Page 54: Lucidi Duino 11 - ELETTRA

Multiple scattering paths

χ2

χ3

χ4

g4 g3 g2

gn = n-body correlation function

Multiple Scattering

µ k( ) = µ0 k( ) 1+ χ2 k( ) + χ3 k( ) + χ4 k( ) +…[ ]

Single Scattering χ k( ) =µ − µ0µ0

µ k( ) = µ0 k( ) 1+ χ k( )[ ]

Contribution from all n-order paths χn k( )

Paolo Fornasini

Univ. Trento

Page 55: Lucidi Duino 11 - ELETTRA

Multiple scattering contributions

µ k( ) = µ0 k( ) 1 + χ2 k( ) + χ3 k( ) +…χ n k( ) +…[ ]

Photo-electron path Set of coordinates

Functions of potential

χn k( ) = A k, r { }( ) sin kRp +φ k, r { }( )[ ] Neglecting

thermal disorder !

Paolo Fornasini

Univ. Trento

Page 56: Lucidi Duino 11 - ELETTRA

Intrinsic losses

Attenuation factor

µtot ω( ) = µ el ω( ) + µinel ω( )

µ

χexp k( ) =µ −µ0

µ0

< χ th k( )

From experiment One-electron theory

S02 = Ψi

N−1 ΨfN−1 2

≈ 0.6 ÷ 0.9

Paolo Fornasini

Univ. Trento

χexp k( ) = S02 χ th k( )

Page 57: Lucidi Duino 11 - ELETTRA

Photo-electron mean-free-path

0

10

20

30

40

0 5 10 15 20

λ (Å

)

k (Å-1)

λe

λh

Core-hole lifetime τh → λh

Photo-electron lifetime τe ⇔ λe

exp − 2Rλ k( )

=1λh

+1λe

Paolo Fornasini

Univ. Trento

Attenuation factor

Page 58: Lucidi Duino 11 - ELETTRA

Disorder effects ?

EXAFS and inelastic effects

Atoms frozen in equilibrium positions !

χ k( ) =S02

kNs

shell∑ Im fs k,π( ) e2iδ1 e

−2Rs /λ (k )

Rs2 exp 2ikRs( )

Intrinsicinelastic effects

0 5 10 15k (Å-1)

χ (k)

Photo-electronmean-free-path

Paolo Fornasini

Univ. Trento

Page 59: Lucidi Duino 11 - ELETTRA

Local disorder

Distance Distribution of distances

Structural disorder - examples Thermal disorder

r

τvib ≈ 10-12 sτexafs ≈ 10-15 s

+•  Sites disorder

+

r•  Free-volume models

•  Distorted coordination shells

Paolo Fornasini

Univ. Trento

Page 60: Lucidi Duino 11 - ELETTRA

Thermal disorder in crystals

Separability of coordination shells ?

Paolo Fornasini

Univ. Trento

0

20

40

60

0 2 4 6 8r (Å)

Ge, 300 K

0

20

40

60

0 2 4 6 8r (Å)

Ge, 1200 K

Simulated distributions for c-Ge

Page 61: Lucidi Duino 11 - ELETTRA

Distributions of distances

Thermal + structural disorder

⇒ distribution of distances

r

Real distribution ρ(r)

Effective distributionP(r,λ)

χ k( ) =S02

kNs

shell∑ Im fs k,π( ) e2iδ1 ρs (r)

0

∫ e−2rs /λ (k )

rs2 e2ikrs dr

Paolo Fornasini

Univ. Trento

Page 62: Lucidi Duino 11 - ELETTRA

Real and effective distributions

0

20

40

60

0 2 4 6 8r (Å)

Ge, 300 K

0

20

40

60

0 2 4 6 8r (Å)

Ge, 1200 K

0

1

2

3

4

0 2 4 6 8r (Å)

Ge, 300 K

0

1

2

3

4

0 2 4 6 8r (Å)

Ge, 1200 K

Paolo Fornasini

Univ. Trento

ρ r( )

ρ r( )r2

P r,λ( ) =ρ r( )r2

e−2r /λ

(λ = 8Å)

EXAFS = short-range probe

Page 63: Lucidi Duino 11 - ELETTRA

The inversion problem Paolo

Fornasini Univ. Trento

χ k( ) =S02

kNs

shell∑ Im fs k,π( ) e2iδ1 ρs (r)

0

∫ e−2rs /λ (k )

rs2 e2ikrs dr

B

k

EXAFS

Characteristic function

χ k( ) ⇒ ρ r( ) ?

Page 64: Lucidi Duino 11 - ELETTRA

Structural models and fitting procedure

χ(k)

k

ExperimentalEXAFS

Prametrisedstructural model Change

parameters

Compare with experiment

ρ (r)

r

Distributionof distances

kχ(k)∝ ρ(r) e−2r /λ

r 20

∫ e2ikrdr

Paolo Fornasini

Univ. Trento

Initial guessparameters

Calculate EXAFS

Page 65: Lucidi Duino 11 - ELETTRA

The simplest model: gaussian approximation Paolo Fornasini

Univ. Trento

r

r€

σ€

P(r,λ) =1

σ 2πexp

r − r( )2

2σ 2

C2 = σ 2 = r − r( )2

Distribution width (EXAFS Debye-Waller factor)

Average distance

C1 = r eff = r real −2σ 2

r1−

Page 66: Lucidi Duino 11 - ELETTRA

Gaussian parametrization of EXAFS (one shell)

Coordination number

Debye-Waller

Average distance

k χ k( ) =S02 e−2C1 /λ

C12 f (k,π ) N exp −2k2σ 2[ ] sin 2kC1 + φ(k)[ ]

Inelasticterms

Totalphase-shift

Back-scatteringamplitude

•  Theory (interaction potentials + scattering theory) •  Experiment (reference samples)

Approx.: Single Scattering Plane waves

N

σ2

C1

Paolo Fornasini

Univ. Trento

Page 67: Lucidi Duino 11 - ELETTRA

Including weak asymmetry Paolo Fornasini

Univ. Trento

r

Asymmetric distribution

r€

σ

C3 €

C2 = σ 2 = r − r( )2

C1 = r eff = r real −2σ 2

r1−

C3 = r − r( )3

Third cumulant Asymmetry parameter

Better for first shell

Page 68: Lucidi Duino 11 - ELETTRA

EXAFS including asymmetry (one shell)

Coordination number

Debye-Waller

Average distance and asymmetry

k χ k( ) =S02 e−2C1 /λ

C12 f (k,π ) N exp −2k2σ 2[ ] sin 2kC1 − 43 k

3C3 + φ(k)

Inelasticterms

Totalphase-shift

Back-scatteringamplitude

•  Theory (interaction potentials + scattering theory) •  Experiment (reference samples)

Approx.: Single Scattering Plane waves

N

σ2

C1 C3

Paolo Fornasini

Univ. Trento

Page 69: Lucidi Duino 11 - ELETTRA

XAFS and other techniques Paolo

Fornasini Univ. Trento

Photo-ionization

XPS - X-ray photo-electron spectroscopy

XAFS – X-ray absorption fine structure

e-

e-

Info on bound electronic states

Info on •  free electronic states •  local structure

XAFS = structural probe – Comparison with diffraction ?

Page 70: Lucidi Duino 11 - ELETTRA

Bragg diffraction .vs. EXAFS

k0 k1

Bragg diffraction EXAFS

Structural probe X-ray or neutron plane waves photo-electron spherical wave

Paolo Fornasini

Univ. Trento

•  long-range sensitivity •  atomic positions •  atomic thermal factors

•  short-range sensitivity •  inter-atomic distances •  relative displacements

Page 71: Lucidi Duino 11 - ELETTRA

EXAFS: a structural probe

Frequency

Inter-atomic distance

Amplitude

Coordinationnumber

Damping

Disorder

  Selectivity of atomic species   Insensitivity to long-range order

Paolo Fornasini

Univ. Trento

0 5 10 15k (Å-1)

R = 2 Å

R = 4 Å

0 5 10 15k (Å-1)

N = 4

N = 2

0 5 10 15k (Å-1)

σ2 = 0.01 Å2

σ2 = 0.005 Å2

Page 72: Lucidi Duino 11 - ELETTRA

EXAFS applications

Non-crystalline materials

mono-atomic

many-atomic

•  Inorganic heterogeneos catalysts •  Metallo-proteins •  Impurities in semiconductors •  Luminescent atoms

Active sites embedded in a matrix

Local properties different from

average properties

•  Crystalline ternary random alloys •  Lattice dynamics studies •  Negative thermal expansion

Paolo Fornasini

Univ. Trento

Page 73: Lucidi Duino 11 - ELETTRA

EXAFS experiments

Page 74: Lucidi Duino 11 - ELETTRA

XAFS: experimental layout

• storage ring • beamlines

• monochromators • mirrors

•  sample holder • detectors

Sample conditioning: cryostat ovenreactor manipulators

Detection: transmissionfluorescenceelectron yield.......

sample holder

storage ring monochromator

mirror

detectors Optical apparatus Source Experim. apparatus

Alternative layouts • dispersive EXAFS • refl-EXAFS......

Paolo Fornasini

Univ. Trento

Page 75: Lucidi Duino 11 - ELETTRA

XAFS: experimental

♠ Monochromators and mirrors

Page 76: Lucidi Duino 11 - ELETTRA

X-ray crystal monochromators

Si (111) 6.2708Si (220) 3.84Si (311) 3.28Si (331) 2.5Si (511) 2.08 Ge (111) 6.5328Ge (220) 4.0004

2d

Paolo Fornasini

Univ. Trento

- Forbidden ‘reflections’- Harmonics- Spurious reflections

Bragg law

2dhkl sinθ = nλ

Incidence angle ⇔ wavelength

Page 77: Lucidi Duino 11 - ELETTRA

Crystal reflectivity Paolo Fornasini

Univ. Trento

0.4

1

0.8

0.6

0.2

-1 0 3 4 1 2 Δθ (arc sec)

Darwinwidth

Rocking curve (from dynamical theory of diffraction)

Higher order reflections have narrower rocking curves.

θB

Page 78: Lucidi Duino 11 - ELETTRA

Energy resolution

Darwin width (Intrinsic resolution) Total angle ΔΘ

Beam divergence

= +

0

2

4

6

8

10 20 30E (keV)

Si (111)

ΔE (eV)

10 20 30

Si (220)

E (keV)

Darwin width

Core-levelwidth

ΔEE

=Δλλ

= ΔΘ cotgθB

Paolo Fornasini

Univ. Trento

Page 79: Lucidi Duino 11 - ELETTRA

Two-crystal monochromators

“Channel-cut”

  Mechanical simplicity Stability   Harmonics Spurious reflections

Independent crystals

  Detuning: harmonic reduction Possibility of focussing   Mechanical complexity Instability

Paolo Fornasini

Univ. Trento

Horizontal output beam

Page 80: Lucidi Duino 11 - ELETTRA

Crystals detuning Paolo Fornasini

Univ. Trento

(111) (333)

Silicon crystal (EB = 10 keV)

E-EB (eV)

3.5 arcsec

0 1 2

Page 81: Lucidi Duino 11 - ELETTRA

X-ray mirrors

θ

θ c = 2δ ∝ λ ρ

harmonics rejection

grazing incidence θ ≈ 10-3 rad

n = 1−δ − iβ

δ ≈10−6 ÷ 10−5

for x - raysabsorption

Complex refractive index

Total external reflection : θ < θc

Beam collimation and

focalisation

Surface bending

Paolo Fornasini

Univ. Trento

Page 82: Lucidi Duino 11 - ELETTRA

XAFS: experimental

♠ Detection schemes

Page 83: Lucidi Duino 11 - ELETTRA

XAFS: direct transmission measurements

V ≈ 100 V/cm I ≈ 10-10 ÷ 10-8 A

Detectors: ionisation chambers

Paolo Fornasini

Univ. Trento

Sample: •  Powders or thin films •  Thickness ≈ 10 µm •  No holes or inhomogeneities

Ι0 Ι1

Page 84: Lucidi Duino 11 - ELETTRA

Direct transmission measurements Paolo Fornasini

Univ. Trento

Thick samples

Diluted samples

Surfaceinformation

Thin samples

Non-diluted samples

Homogeneous samples

Bulk information (not fom surface) from:

OK NO

High accuracy attainable

Page 85: Lucidi Duino 11 - ELETTRA

Indirect detection methods Paolo Fornasini

Univ. Trento

•  X-ray fluorescence

Detection of decay products

•  Electrons

•  Optical luminescence XEOL-PLY =

FLY = FLuorescence Yield

AEY = Auger Electron Yield

PEY = Partial Eletron Yield

TEY = Total Electron Yield

X-ray Ecxited Optical Luminescence Photo Luminescence Yield

Ι0

Page 86: Lucidi Duino 11 - ELETTRA

I f zn( ) dz = I0 (ω) exp −µs ω( )znsinθi

η fµa ω( ) dz

sinθiexp −

µs ω f( )znsinθ f

Ω2π

XAFS: fluorescence detection (FLY)

I0 If

θi θf

Ω

zs zn

Absorption Fluorescence Absorption

Paolo Fornasini

Univ. Trento

Page 87: Lucidi Duino 11 - ELETTRA

Fluorescence: total intensity

Sample of thickness zs θi = θf = 45°

Thin samples

1− exp A( ) ≈ 1−1− A = − A

I f ∝µa ω( )

Thick samples

1− exp A( ) ≈ 1

I f = I0 ω( )η fΩ4π

µa ω( )µs ω( ) + µs ω f( )

OK for diluted samples (< 1%)

Paolo Fornasini

Univ. Trento

I f = I0 ω( )η fΩ4π

µa ω( )µs ω( ) + µs ω f( )

1− exp A( ){ } A = − 2zs µs ω( ) + µs ω f( )[ ]

Page 88: Lucidi Duino 11 - ELETTRA

Fluorescence signal

I0 If

Background signals

Elastic scattering Compton scattering Other fluorescences

Energy selective detectors Filters + Soller slits

Paolo Fornasini

Univ. Trento

Page 89: Lucidi Duino 11 - ELETTRA

XAFS: electron detection (a) Paolo Fornasini

Univ. Trento

Auger electrons: •  Fixed energy ⇒ atomic selectivity •  Intensity ∝ µx

⇒ XAFS signal

Photo-electrons: •  Energy varies with hν •  Intensity∝ µx

⇒ XAFS signal

Ι0 hν

Electron mean free path: •  adsorbates •  thin layers

Page 90: Lucidi Duino 11 - ELETTRA

Indirect processes and escape depth Paolo Fornasini

Univ. Trento

Photons penetration depth ~ 500 Å

Secondary electrons escape depth ~ 50 - 100 Å

Primary electrons mean free path ~ 5 - 10 Å

Adsorbate

Bulk

Page 91: Lucidi Duino 11 - ELETTRA

XAFS: electron detection (b) Paolo Fornasini

Univ. Trento

AEY = Auger Electron Yield - narrow energy window - only direct Auger electrons - spurious structures from photoelectrons

PEY = Partial Eletron Yield - large energy window - Auger (direct + secondary) = XAFS signal - Photoel. (direct + secondary) = background

TEY = Total Electron Yield - all electrons collected

- Auger (direct + second.) = XAFS signal -  Photoel. (direct + second.) = background

-  XAFS from Auger and photoel.

XAFS of adsorbates

AEY - PEY - TEY

TEY

Bulk materials

Page 92: Lucidi Duino 11 - ELETTRA

XAFS: experimental

♠ Alternative layouts

Page 93: Lucidi Duino 11 - ELETTRA

Dispersive XAFS (a) Paolo Fornasini

Univ. Trento

Page 94: Lucidi Duino 11 - ELETTRA

Dispersive XAFS (b)

S.R. incoming white beam

Curved crystal poly-chromator

2d sinθ = λ

θ1 θ2 θ3

Position-sensitive detector

E1

E2

E3

Paolo Fornasini

Univ. Trento

Page 95: Lucidi Duino 11 - ELETTRA

Dispersive XAFS (c)

 Critical in terms of temporal and spatial beam stability and sample presentation

 Only trasmission mode  X-ray beam not perfectly focussed through the sample  No reference measurements during acquisition

 No mechanical movements (no dead times)  Simultaneous acquisition of all data points  Acquisition time determined by acceptable statistics

Paolo Fornasini

Univ. Trento

OK for time-resolved measurements

NO accurate quantitative results

Page 96: Lucidi Duino 11 - ELETTRA

EXAFS: data analysis, examples

Page 97: Lucidi Duino 11 - ELETTRA

Analysis - Available software Paolo Fornasini

Univ. Trento

List of available software: XAFS Society web-site = http://xafs.org/Software

FEFF: ab initio MS calculations of EXAFS and XANES for clusters of atoms. The code yields scattering amplitudes and phases, as well as various other properties.

Athena: interactive graphical utility for processing EXAFS data. Artemis: interactive graphical utility for fitting EXAFS data using theoretical standards from FEFF and sophisticated data modelling.library.

IFEFFIT: interactive program for XAFS analysis.

GNXAS: EXAFS data analysis based on MS calculations and advanced fitting of raw experimental data. Main peculiarities: MS associated with 2, 3, and 4- atom configurations, multi-electron excitation, various model peaks for distribution functions.

Page 98: Lucidi Duino 11 - ELETTRA

EXAFS data analysis

♠ Extraction of EXAFS signal

Page 99: Lucidi Duino 11 - ELETTRA

Total absorption coefficient

source monochromator

x

sample detectors

Φ0 Φ

Paolo Fornasini

Univ. Trento

0

0.4

0.8

1.2

8800 9200 9600 10000E (eV)

CuCl (15 K)

edge Cu K

ln I0I

= lnΦ0

Φ+C' = µtotx+C'

Page 100: Lucidi Duino 11 - ELETTRA

Edge absorption coefficient

-2

-1

0

1

11 11.5 12Photon energy (keV)

µtot

x

Ge, 10 K

Experimental signal

-2

-1

0

1

11 11.5 12

µtot

x

Photon energy (keV)

µnx

µx

Extrapolationof pre-edge behaviour

0

1

2

11 11.5 12Photon energy (keV)

µx

Edge absorption coefficient

Paolo Fornasini

Univ. Trento

Page 101: Lucidi Duino 11 - ELETTRA

Photoelectron wavenumber Paolo Fornasini

Univ. Trento

Edgeenergy

k =2m2 hν −Es( )

Es E = hν, photon energy

Photoelectron wavenumber

?

hν k

Es = 1st maximum of 1st derivative Experimental convention

Page 102: Lucidi Duino 11 - ELETTRA

Atomic absorption coefficient Paolo Fornasini

Univ. Trento

EXAFS function

Isolated atom

Embedded atom

µ0 ?

χ k( ) =µ −µ0

µ0

0

1

2

11 11.5 12Photon energy h ν (keV)

µxµ0x

Es

Ge

Page 103: Lucidi Duino 11 - ELETTRA

Best-fitting polynomial spline Paolo Fornasini

Univ. Trento

1.4

1.6

1.8

0 500 1000 1500

Ge - 10 Kµx

E-Es (eV)

1.4

1.6

1.8

0 5 10 15 20

Ge - 10 Kµx

k (Å-1)

Polynomial spline - best fit

E space k space €

χ k( ) =µ −µ0

µ0

Page 104: Lucidi Duino 11 - ELETTRA

Fit optimization Paolo Fornasini

Univ. Trento

1.4

1.6

1.8

0 5 10 15 20

µx

k (Å-1)

Fit A

0

4

8

12

16

0 1 2 3 4 5

Fit A

r (Å)

0

4

8

12

16Fit B

0 1 2 3 4 5r (Å)

1.4

1.6

1.8

0 5 10 15 20

µxFit B

k (Å-1)€

µ −µ0

Fourier transf.

Page 105: Lucidi Duino 11 - ELETTRA

EXAFS signal Paolo Fornasini

Univ. Trento

χ k( ) =µ −µ0

µ1

-0.4

0

0.4

0 5 10 15 20

Ge - 10 K

k χ(k)

k (Å-1)

-0.04

0

0.04Ge -10 K

χ (k)

Page 106: Lucidi Duino 11 - ELETTRA

EXAFS signals: examples

Amorphous Germanium

Crystalline Germanium

0 5 10 15k (Å-1)

0 5 10 15k (Å-1)

-0.5

0

0.5

0 5 10 15

k χ

(k)

(Å-1

)

k (Å-1)

T = 77 K T = 300 K T = 77 K

1 coord. shell Several coord. shells

Temperature effect

Paolo Fornasini

Univ. Trento

Page 107: Lucidi Duino 11 - ELETTRA

Diffraction .vs. EXAFS - (b)

-0.4

0.0

0.4

0 4 8 12 16 20

k χ(

k)

c-Ge

0

5000

10000

15000

0 2 4 6 8

c-SiO2

k i(k

) [a.

u]

-2.0

0.0

2.0

0 5 10 15 20 25

a-SiO2

k i(k

)

G (1/A)0 5 10 15 20

-0.4

0.0

0.4 a-Ge

k χ(

k)

k (1/A)

Diffraction EXAFS G k

Paolo Fornasini

Univ. Trento

Page 108: Lucidi Duino 11 - ELETTRA

Quantitative analysis of EXAFS Paolo Fornasini

Univ. Trento

0 5 10 15k (Å-1)

kχ(k)

0

0.5

-0.5

χ(k) = Ai (k)sinΦi (k)i∑

Sum over: •  S.S. paths (coord. shells)

•  M.S. paths

Input for each path: •  backscattering amplitude •  phaseshifts •  inelastic terms Different analysis procedures

Page 109: Lucidi Duino 11 - ELETTRA

EXAFS data analysis

♠ Fourier transform

Page 110: Lucidi Duino 11 - ELETTRA

Data analysis - Fourier Transform k→r

-40

0

40

5 10 15 20

k3 χ(k) W(k)

k (Å-1)

0 2 4 6r (Å)

Imaginary part

Modulus

1st

2nd

3rd

Ge, 10 K

F(r) = χ k( ) kn W k( )kmin

kmax

∫ e2ikr dk

window weight

Peak's position and shape influenced by: - total phaseshifts - disorder - Fourier transform window

Paolo Fornasini

Univ. Trento

Page 111: Lucidi Duino 11 - ELETTRA

1.5 2 2.5 3 3.5

σ = 0.05 Å

σ = 0.1 Å

1.5 2 2.5 3 3.5r(A)

Fourier Transform and distribution Paolo Fornasini

Univ. Trento

F.T.: k=2.5-16 K3, square w.

EXAFS simulation (Ge phases and amplit.)

-0.2

0

0.2

2 6 10 14

k χ(

k)k (Å-1)

Page 112: Lucidi Duino 11 - ELETTRA

i Ni Ri (Å)1 8 2.482 6 2.863 12 4.054 24 4.755 8 4.966 6 5.73

0

0.2

0.4

0.6

0 1 2 3 4 5 6

Mod

ulus

of

F.T.

(a.

u.)

r (Å)

Fe (T = 300K)

24

812

668 • Peak shift

• Superposition of shells

1 2

3

26 - Iron: bcc structure Paolo

Fornasini Univ. Trento

Page 113: Lucidi Duino 11 - ELETTRA

0

40

80

120

0 1 2 3 4 5 6

Mod

ulus

of F

.T.

(a.u

.)

r (Å)

Cu (T=4K )

12

6

12

24

i Ni Ri (Å)1 12 2.552 6 3.613 24 4.424 12 5.105 24 5.706 8 6.25

2

1

4

3

• Peak shift • Focussing effect

1 4

29 - Copper: fcc structure Paolo

Fornasini Univ. Trento

Page 114: Lucidi Duino 11 - ELETTRA

0 5 10 15 20k (Å-1)

k2 χ(k

) (Å

-2)

0

4

-4

0

0

4

4

-4

4 K

250 K

500 K

0 1 2 3 4 5 60

40

80

120

Mod

. of F

.T. (

arb.

uni

ts)

r (Å)

4 K

500 K

250 K

Fourier transforms EXAFS signals

29-Cu: temperature effects Paolo

Fornasini Univ. Trento

Page 115: Lucidi Duino 11 - ELETTRA

i Ni Ri (Å)1 4 a(√3)/4 2.452 12 a/√2 4.003 12 a(√11)/4 4.694 6 a 5.665 12 a(√19)/4 6.166 24 a(√6)/2 6.93

0

20

40

60

0 1 2 3 4 5 6 7

Mod

ulus

of F

.T. (

a.u.

)

r (Å)

Ge(10 K)

24

121212

64

32 - Germanium: diamond structure Paolo

Fornasini Univ. Trento

a = 5.66 Å

1

2

3

4

56

Page 116: Lucidi Duino 11 - ELETTRA

Fourier transforms

EXAFS signals

32-Ge: crystalline and amorphous Paolo

Fornasini Univ. Trento

0

20

40

60

0 2 4 6

F(r)

(arb

.u.)

r (Å)

10 K300 K

c - Ge

0 2 4 6r (Å)

10 K300 K

a - Ge

0 5 10 15 20k (Å-1)

300 K

10 K a-Ge

-0.4

0.0

0.4

k χ(

k)

10 K c-Ge

-0.4

0.0

0.4

0 5 10 15 20

k χ (

k)

k (Å-1)

300 K

Page 117: Lucidi Duino 11 - ELETTRA

EXAFS data analysis

♠ First shell analysis

Page 118: Lucidi Duino 11 - ELETTRA

1st-shell Fourier back-transform Paolo Fornasini

Univ. Trento

0 1 2 3 4 5

Ge - 10 K

r (Å)

-0.02

0

0.02

2 6 10 14 18

k (Å-1)

k χ(k)

χ ' k( ) = 2 π( ) F r( )W ' r( )rmin

rmax∫ e−2ikr dr

- No peak superposition- No MultipleScattering - F.T. artifacts

First-shell contribution

Page 119: Lucidi Duino 11 - ELETTRA

1st-shell distribution of distances Paolo Fornasini

Univ. Trento

r

Gaussian approximation

r€

σ

r

Asymmetric distribution

r€

σ

C3

σ 2 = r − r( )2

C3 = r − r( )3

Better for first shell

Page 120: Lucidi Duino 11 - ELETTRA

EXAFS distance Paolo Fornasini

Univ. Trento

R

R

r

r = r b − r a

EXAFS, diffuse scattering

R = r b −

r a

Bragg diffraction, dilatometry

r > R

Page 121: Lucidi Duino 11 - ELETTRA

Real and effective distributions Paolo Fornasini

Univ. Trento

r

Real distribution ρ(r)

Effective distributionP(r,λ)

ρs (r)e−2rs /λ (k )

rs2

r eff = r real −2σ 2

r1−

C1

r

Page 122: Lucidi Duino 11 - ELETTRA

EXAFS for first shell

Coordination number

Debye-Waller

Average distance and asymmetry

k χ k( ) =S02 e−2C1 /λ

C12 f (k,π ) N exp −2k2σ 2[ ] sin 2kC1 − 43 k

3C3 + φ(k)

Inelasticterms

Totalphase-shift

Back-scatteringamplitude

•  Theory (interaction potentials + scattering theory) •  Experiment (reference samples)

Approx.: Single Scattering Plane waves

N

σ2

C1 C3

Paolo Fornasini

Univ. Trento

Page 123: Lucidi Duino 11 - ELETTRA

Analysis - non-linear fitting method

Theoretical EXAFS

Experimental EXAFS

Theory

Paolo Fornasini

Univ. Trento

f k,π( ) , φ k( ), λ

e0, C1, C3

S02N, σ 2

Eb

Es

e0

Non-linear fit •  k-space •  r-space

•  Correlation •  Accuracy

•  abs. values •  rel. values

Check theory against standards

Page 124: Lucidi Duino 11 - ELETTRA

EXAFS data analysis

♠ 1st shell phase and amplitude analysis

Page 125: Lucidi Duino 11 - ELETTRA

Separate evaluation of phase and amplitude

Total phase (rad)

k

Amplitude

k

Paolo Fornasini

Univ. Trento

A k( ) =S02 e−2C1 /λ

C12 f (k,π ) N exp −2k2C2 +

24k 4C4 +…

?

Φ k( ) = 2kC1 −43k 3C3 + ...+φ k( )

?

From complex Fourier transform and back-transform

Page 126: Lucidi Duino 11 - ELETTRA

“Ratio method” - phases Paolo Fornasini

Univ. Trento

Φs −Φm = 2k C1s −C1

m( )− 43 k3 C3

s −C3m( )

Φs −Φm

2k= C1

s −C1m( )− 43 k

2 C3s −C3

m( )

If suitable model compound available …

Φs −Φm

2k

k2

ΔC1

ΔC3 = 0

k2€

ΔC3 > 0

ΔC1

s = sample m = model

Page 127: Lucidi Duino 11 - ELETTRA

“Ratio method” - amplitudes Paolo Fornasini

Univ. Trento

If suitable model compound available … s = sample m = model

ln As

Am≅ ln N

s

Nm − 2k2 σ s2 −σm

2( )

intercept Slope

ln As

Am

k2

ln Ns

Nm

Δσ 2

Page 128: Lucidi Duino 11 - ELETTRA

“Ratio method” - results Paolo Fornasini

Univ. Trento

N s

Nm

ΔC1Δσ 2

ΔC3

Ratio of coordination numbers

Relative values :

→ Thermal expansion

Width

Asymmetry   Absolute values ?   Physical meaning ?

Page 129: Lucidi Duino 11 - ELETTRA

“Ratio method” - OK when … Paolo

Fornasini Univ. Trento

χ k( ) = A k( ) sinΦ k( )•  Only Single Scattering •  Only one distance •  Suitable reference model available

•  First coordination shell, one distance •  Same sample-model chemical environment

T or p-dep. Studies Amorphous .vs. crystalline samples

•  1st shell in bcc structure (2 distances) •  Superposed outer shells •  M.S. contributions

•  1st shell, different sample-model chemical environment

•  Separated outer shells, weak M.S. Depending on sought accuracy

Page 130: Lucidi Duino 11 - ELETTRA

EXAFS data analysis

♠ Outer shells analysis

Page 131: Lucidi Duino 11 - ELETTRA

Analysis - Outer shells back-transform r→k

2 6 10 14 18

k (Å-1)2 6 10 14 18

k (Å-1)

χ' k( ) = 2 π( ) F r( ) W' r( )rmin

rmax

∫ e−2ikr dr

0 1 2 3 4 5 6 r (Å)

1st

2nd

3rd

Ge, 10 K

Paolo Fornasini

Univ. Trento

- Peak superposition- MultipleScattering - F.T. artifacts

Sometimes OK for D.W. factors

Page 132: Lucidi Duino 11 - ELETTRA

Analysis - non-linear fitting of outer shells

Theoretical EXAFS

Experimental EXAFS

Theory

Paolo Fornasini

Univ. Trento

fpath k,π( ) , φpath k( ), λ

e0, C1, C3

S02N, σ 2

Non-linear fit •  k-space •  r-space

•  Reduction of free param. •  Relations between param. •  Approximations

SS & MS path sorting

For every path !!

Page 133: Lucidi Duino 11 - ELETTRA

r

k

Δk Δr

N ind =2 Δk Δrπ

+ 1

Maximum number of independent parameters

Analysis - Independent parameters Paolo Fornasini

Univ. Trento

Correlation ofparameters

Page 134: Lucidi Duino 11 - ELETTRA

EXAFS data analysis

♠ Interpretation of results

Page 135: Lucidi Duino 11 - ELETTRA

0

1

2

3

0 200 400 600

Cu - 1st shell

T(K)

Expa

nsio

n (1

0-2 Å

)

XRDEXAFS

Thermal expansion Paolo

Fornasini Univ. Trento

R

R

r

Bragg diffraction lattice expansion

EXAFS bond expansion

Complementarity EXAFS - XRD: Info on perpendicular vibrations

Page 136: Lucidi Duino 11 - ELETTRA

Mean Square Relative Displacements

Δu|| = 0

r ≈ R0 +Δu⊥

2

2R0σ 2 ≈ Δu||

2 MSRD||

MSRD⊥

Mean values (harmonic approximation)

r R0 €

Δu⊥

Δu||

Paolo Fornasini

Univ. Trento

Page 137: Lucidi Duino 11 - ELETTRA

Bond distances Paolo Fornasini

Univ. Trento

R

R

r

r = r b − r a

EXAFS, diffuse scattering

“True” bond length “True” bond expansion

R = r b −

r a

Bragg diffraction, dilatometry

“Apparent” bond length “Apparent” bond expansion

Page 138: Lucidi Duino 11 - ELETTRA

EXAFS Debye-Waller factor

MSDMean Square Displacements

DCFDisplacement

Correlation Function

σ 2 ≈ MSRD = Δu||2 = ˆ R ⋅ u b −

u a( )[ ] 2

= ˆ R ⋅ u b( )2

+ ˆ R ⋅ u a( )2− 2 ˆ R ⋅ u b( ) ˆ R ⋅ u a( )

Paolo Fornasini

Univ. Trento

Thermal factors from Bragg diffraction:

U||b = ˆ R ⋅ u b( )2

= σ ||b( )2

U||a = ˆ R ⋅ u a( )2

= σ ||a( )2

σ ||b

σ ||a

r Δu

Δu||

R

Page 139: Lucidi Duino 11 - ELETTRA

Debye-Waller factor – Debye model

0

1

2

0 100 200 300 400 500T (K)

10-2 Å2

Copper

1st shell

3rd shell4th shell2nd shell

MSD

Paolo Fornasini

Univ. Trento

Absolute values from fit to theoretical models

σ 2 =32ωD

3µω coth ω

2kBT0

ωD∫ 1−sin ωqDR( )ωqDR

Debye correlated model (OK for metals)

σ 2 •  increases with T •  depends on the shell

θD = 315 K θM = 313 K

θ4 = 321 K θ3 = 322 K θ2 = 283 K θ1 = 328 K

Page 140: Lucidi Duino 11 - ELETTRA

Correlation

0

1

2

0 100 200 300 400 500T (K)

10-2 Å2

Copper

1st shell

3rd shell4th shell2nd shell

MSD

Paolo Fornasini

Univ. Trento

Complementarity EXAFS - XRD: Info on vibrations correlation

Bragg diffraction absolute vibrations

EXAFS relative vibrations

(along the bond)

Page 141: Lucidi Duino 11 - ELETTRA

Debye-Waller factor – Einstein model

0

0.01

0.02

0 200 400

(Å2)

T (K)

Germanium

1st

2nd

3rd

2 MSD

Non-Bravais crystals

Δu||2 =

2µωE

coth ωE

2kT

µ m1

m2

k

ω

θD = 354 K θM = 290 K

θ3 = 290 K θ2 = 299 K θ1 = 460 K

Debye Einstein

(THz)

ν3 = 3.95 ν2 = 4.21 ν1 = 7.55 €

ν =ω / 2π(eV/Å2)

k3 = 2.18 k2 = 2.48 k1 = 8.15 €

k = µω2

Paolo Fornasini

Univ. Trento

Page 142: Lucidi Duino 11 - ELETTRA

Parallel and perpendicular MSRD

Δu⊥2

Δu||2

Paolo Fornasini

Univ. Trento

0

1

2

3

4

5

0 200 400 600

Cu 1st shell

MSR

D (

10-2

Å2 )

T (K)

||

0

1

2

3

4

5

0 200 400 600

Ge 1st shell

T (K)

||

Δu⊥2

Δu||22.7 6 Perpendicular-parallel

anisotropy

Page 143: Lucidi Duino 11 - ELETTRA

First-shell distribution asymmetry

C3* T( ) ≈ − 2k3σ 0

4

k0z2 +10z+11− z( )2

Paolo Fornasini

Univ. Trento

0

1

2

3

4

5

0 200 400

C 3 (10-4

Å3 )

T (K)

Cu - 1st shell

r

r€

σ

C3K3 = -1.37 eV/A3

Page 144: Lucidi Duino 11 - ELETTRA

The end

Page 145: Lucidi Duino 11 - ELETTRA

Basic bibliography Paolo Fornasini

Univ. Trento

•  G.S. Brown and S. Doniach: The principles of X-ray Absorption Spectroscopy, in Synchrotron Radiation research, ed. by E. Winick and S. Doniach, Plenum (New York, 1980) [A general introduction to X-Ray absorption]

• P.A. Lee, P.H. Citrin, P. Eisenberger, and B.M. Kincaid, Rev. Mod. Phys. 53, 769 (1981) [Review paper on EXAFS]

•  T.M. Hayes and J. B. Boyce, Solid State Physics 27, 173 (1982) [Review paper on EXAFS]

•  B.K. Teo: EXAFS, basic principles and data analysis, Springer (Berlin, 1986) [Introductory book on EXAFS]

•  D.C. Koningsberger and R. Prins eds.: X-ray Absorption: principles and application techniques of EXAFS, SEXAFS and XANES, J. Wiley (New York, 1988) [Introductory book on XAFS]

•  M. Benfatto, C.R. Natoli, and A. Filipponi, Phys. Rev. B 40, 926 (1989) [Paper on multiple scattering calculations]

•  J. Stöhr: NEXAFS spectroscopy, Springer (Berlin, 1996) [Book on XANES] •  J.J. Rehr and R.C. Albers, Rev. Mod. Phys. 72, 621 (2000) [Review paper on

EXAFS] • P. Fornasini, J. Phys.: Condens. Matter 13, 7859 (2001) [EXAFS and lattice

dynamics] • G. Bunker: Introduction to XAFS, Cambridge U.P. (2010) [Introductory book on XAFS]

XAFS Society home page: http://www.ixasportal.net/ixas/


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