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Managing Pathogens in Foods: A Post-Harvest Perspective!

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Managing Pathogens in Foods: A Post-Harvest Perspective! John B. Luchansky, Ph.D. Microbial Food Safety Research Unit, Eastern Regional Research Center, USDA Agricultural Research Service, Wyndmoor, PA 19038
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Page 1: Managing Pathogens in Foods: A Post-Harvest Perspective!

Managing Pathogens in Foods: A Post-Harvest Perspective!

John B. Luchansky, Ph.D.Microbial Food Safety Research Unit,

Eastern Regional Research Center,USDA Agricultural Research Service, Wyndmoor, PA 19038

Page 2: Managing Pathogens in Foods: A Post-Harvest Perspective!

The Agricultural Research Service (ARS) is the Chief Scientific Agency of the

U.S. Department of Agriculture

• 100 Locations, in All 50 States + International Sites

• 2200 Ph.D. Scientists

• 8000 Employees

• >$1 Billion Budget

• $105 Million for Food Safety, 77 Projects + CRADA

Page 3: Managing Pathogens in Foods: A Post-Harvest Perspective!

ARS National Programs

Animal Production

Animal Health

Arthropod Pests of Animals and Humans

Animal Well-Being and Stress Control Systems

Aquaculture

Plant, Microbial & Insect Germplasm Conservation & Development

Plant Biological & Molecular Processes

Plant Diseases

Crop Protection & Quarantine

Crop Production

Bioenergy & Energy Alternatives

Methyl Bromide Alternatives

Animal Production Nutrition/Safety Natural ResourcesCrop Production

Water Quality & Management

Soil Resource Management

Air Quality

Global Change

Rangeland, Pasture & Forages

Manure & Byproduct Utilization

Integrated Agricultural Systems

Human Nutrition

Food Safety

New Uses, Quality & Marketability of Plant & Animal Products

Page 4: Managing Pathogens in Foods: A Post-Harvest Perspective!

USDA/ARS – FUNDING FOR FOOD SAFETY

Agricultural Research Service: $102MPre-harvest $60MPost-harvest $42M

Eastern Regional Research Center: $18M~18% of total food safety budget~43% of post-harvest budget

Page 5: Managing Pathogens in Foods: A Post-Harvest Perspective!

Although the United States maintains one of the safest food supplies in the world…

Per year in the USA • 5,000 deaths• 325,000 hospitalizations• 76 million cases• $5 to $8.4 billion in costs

Total Cases per year in USA

Campylobacter 1,963,000

Salmonella 1,342,000

E. coli 0157:H7 92,500

Listeria monocytogenes 2,000Mead et al., 1999

Page 6: Managing Pathogens in Foods: A Post-Harvest Perspective!

Incidence of Infection from Pathogens Transmitted through Foods

• Preliminary FoodNet Data --- 10 States, 2008:– Compared to preceding 3 years (2005-2007), the

estimated incidence of Campylobacter, Listeria, Salmonella, STEC O157, and Yersinia did not change significantly.

– By 2008, in comparison with 1996-1998, modeled relative rates of infection decreased by 36% for Listeria, 32% for Campylobacter, and 25% for STEC O157. No significant change for Salmonella.

Morbid. Mortal. Wkly. Rpt.April 10, 2009

Page 7: Managing Pathogens in Foods: A Post-Harvest Perspective!

Globalization of Food Trade “The World on your Plate”

Herb Butter

Salted buttergarlic pureegarlic saltlemonparsleypepperwater

ChickenBreast Chicken

Batter: FlourWater

Bread Crumbs

Bread crumbRape-seed oil

- Ireland- China, USA, Spain- China, USA, Spain- USA- France, UK- Indonesia- Ireland

- Ireland, BelgiumUK, France etc.

- Belgium, France- Ireland

- Ireland, UK- EU, Australia Eastern Europe

Chicken KievCourtesy A. Reilly, FSAI, Ireland & Gary Ades, USA.

Page 8: Managing Pathogens in Foods: A Post-Harvest Perspective!

Microbiological Safety Issues Associated with Imported Foods

(George Nychas, 2009)

Sanitation practices for food production, transport and preparation are not universally equivalent worldwide

Importing foods can also move pathogens from where they are indigenous, to where they seldom or do not exist

Page 9: Managing Pathogens in Foods: A Post-Harvest Perspective!

Imports vs. Exports2001 2002 2003 2004 2005

($ million)

Import 34,115 35,826 40,888 47,234 51,892

Export 37,813 38,569 40,987 44,023 45,851

About 15% of food consumed in USA in 2006 was imported

(www.ers.usda.gov/publications/Agoutlook/AOTables/AOTables.htm)

Mike Doyle, 2008

Page 10: Managing Pathogens in Foods: A Post-Harvest Perspective!

Globalization of Food Industry

0

2,000,000

4,000,000

6,000,000

8,000,000

10,000,000

12,000,000

1989 1991 1993 1995 1997 1999 2001 2003 2005 2007Fiscal Year

FDA Import Entries Foods OnlyIn 2007, ca. 1% of imported food under FDA jurisdiction

was visually inspected; < 0.5% was tested

Imports totaled >$65 M in 2006

>130,000 foreign food facilities registered by FDA to Export to USA (Ades et al., 2007)

Page 11: Managing Pathogens in Foods: A Post-Harvest Perspective!

Food Safety Focal Points – Post Harvest

Raw Material

Slaughter FabricateCenters of Excellence in Process

Validation (CEPV)

Process

Finished Product

• Chemical (Na Lactate)• Non-Thermal (RF, PEF, UV)

Interventions• Physical (Cs137, γ-Irradiation)• Biological (LAB, CE, Bacterocins)

Recovery/Characterization• Biosensors (Micro. & Immuno)• Nucleic Acid (PCR, PFGE)• Genomics & Proteomics (Nucleic Acid

Facility)

Modeling• Predictive Microbiology(PMP, ComBase) (Center of

Excellence in Microbial Modeling and Informatics, CEMMI)

Find, Characterize, & Kill

Page 12: Managing Pathogens in Foods: A Post-Harvest Perspective!

Food Safety – The Big Picture!

Page 13: Managing Pathogens in Foods: A Post-Harvest Perspective!

Is L. monocytogenes still a concern?

• 2009– Alaska- recalled 872 pounds of sausage product. – Wisconsin- recalled 3,590 pounds of bacon bits.

• 2008– USA

• Total of 14 recalls• 349,660 pounds

– Canada• > 20 products recalled• ~$20 million

USDA/FSIS Public Meeting, Retail Lm Risk Assessment, June 23, 2009

Comparative risk of listeriosis from prepackaged RTE deli meat versus RTE deli meat sliced and packaged at retail

Page 14: Managing Pathogens in Foods: A Post-Harvest Perspective!

What is the true prevalence of Listeria monocytogenes in RTE meats?

USDA/FSIS Public Meeting, Lm Risk Assessment, June 23, 2009

• 2.8% (31,009) All meat & poultry USDA/FSIS (1990-1999)• 1.6% (32,800) Franks USDA/ARS (2000-2002)• 1.8%(31,700) RTE foods NFPA (2000-2002)• 1.39% (3,518) Deli sliced USDA/ARS/NAFSS (2006)• 0.17% (3,522) Prepackaged slices USDA/ARS/NAFSS (2006)

•Levine et al., JFP 64:1188-1193, 2001.•www.foodsafety.gov/~dms/lmrisk.html•Wallace et al., JFP 66:584-591, 2003.•Gombas et al., JFP 66: April, 2003.

Americans will eat about 7 billion hot dogs this summer!

Page 15: Managing Pathogens in Foods: A Post-Harvest Perspective!

Sprayed Lethality In Container (“SLIC™”) Method to Deliver Antimicrobials to Surface Contaminated Foods

– Deliver antimicrobial “purge” to packaging container just prior to entry of product• Metered/lower dose of antimicrobial based on

product surface area– Vacuum seal to uniformly distribute

antimicrobials over product surface• Contact time possible throughout shelf life

A patent application has been applied for on this inventionLuchansky et al., Meat Science 71:92-99, 2005

Page 16: Managing Pathogens in Foods: A Post-Harvest Perspective!

Components of “SLIC”- Antimicrobial with anti-listerial activity

-Lauric arginate ester (LAE) : Mirenat-N or CytogardTM(10% solution of lauric arginate) - Surfactant

- Apparatus to deliver antimicrobial -Modified commercial bagger-Metered commercial sprayer

Page 17: Managing Pathogens in Foods: A Post-Harvest Perspective!

SLIC® – Sprayed Lethality in Container Technology

•Cheap to install ($5K) & apply ($0.002/lb)•Savings to processor - $0.5-2M per year• Initial 2- 5 log reduction of pathogens

• Less impact on flavor• Lower volume of

antimicrobialapplied/retained

2007 USDA/ARS and 2008 Federal Laboratory Technology Transfer Awards

Meat Science 71:92-99, 2005

Page 18: Managing Pathogens in Foods: A Post-Harvest Perspective!

SLIC® Technology validated on various meat and poultry products & applicable to other foods

-Lethality and partial inhibition on hams -post process control of L. monocytogenes

-Frankfurters & ham (~5 log decrease)

-Turkey breast (~3 log decrease)

-Roast beef (~2 log decrease)

Page 19: Managing Pathogens in Foods: A Post-Harvest Perspective!

0

1

2

3

4

5

6

7

8

9

No-0 ppm No-22 ppm Low- Control Low- 22 ppm

Treatments

Log

CFU

/g

Day 0 Day 14 Day 30 Day 45 Day 60 Day 90 Day 120

Lactate/Diacetate combined with SLIC®/LAE to control Lm in frankfurters

Cost effect strategy to achieve Alternative 2 status, and possibly Alternative 1 status, for ensuring the safety of RTE meat and poultry products

Campano et al., RMC - 2009

0.68% Klac + 0.097 NaD22 ppm LAE

Page 20: Managing Pathogens in Foods: A Post-Harvest Perspective!

High Pressure Processing 200 MPa

For 3’

400 MPa

For 3’

No LAE 0 0.1

LAE (10%)

> 5.4 > 5.4

Water heated at 203°F (95°C) for up to 3 minutes

Validated a ~2.0 log10 reduction

of L. monocytogenes

J. Food Protection 69:39-46, 2006.

Pasteurization Tunnel

Page 21: Managing Pathogens in Foods: A Post-Harvest Perspective!

– Increased popularity, small producers and small batches• May lack resources to ascertain lethality, appeal FSIS

decisions, and/or provide documentation for HACCP– High and variable pH

• Lack of starter culture, reproducibility– Low temperature fermentation/ripening & drying

• Ambient processing temperatures• Considerable handling

– Extended shelf-life• 12 months soudjouk, 24 months kippered beef & jerky

– Little information on pathogen viability during processing and storage• Association with recalls & illness

Why are Specialty/Ethnic RTE Meats of Concern?

Teewurst

Jerky

Soudjouk

Scrapple

Page 22: Managing Pathogens in Foods: A Post-Harvest Perspective!

Result: >7.0 log10 CFU reduction of L. monocytogenes, E. coli O157:H7, and SalmonellaImpact: Validated Process Lethality & Shorter time and/or lower temperature saves ~$5K/day

a) 165°F for 2.5 or 3.5 hours - Poultry

b) 180°F for 1.5 or 2.5 hours - BeefHeat/dry Jerky at:

(Porto-Fett et al., J. Food Protection 71:918-926, 2008)(Porto-Fett et al., Poultry Science 88:1275-1281, 2009)

Page 23: Managing Pathogens in Foods: A Post-Harvest Perspective!

What is Scrapple?• A savory mush of pork trimmings, cornmeal, and

flour with a refrigerated shelf life of ~50 days

• Invented 200 years ago in Chester county, Pennsylvania, by German settlers

• RTE, but reheated for preference by pan frying

• ~6 million pounds (~$15M) consumed in 2008

Page 24: Managing Pathogens in Foods: A Post-Harvest Perspective!

Question Responses

Do you consider scrapple as RTE?

Yes: 50 (46%); No: 59 (54%)

How thick (cm) do you slice scrapple?

<1 cm: 5 (5%); 1-2 cm: 42 (39 %); 2-3 cm: 41(38%); >3 cm: 21 (19%)

How do you prepare scrapple?

Pan fry: 95 (86%); Bake 7 (6%); Broil 5 (5%);Other 4 (4%)

For how long (minutes) do you cook scrapple?

1-5: 9 (11%); 6-10: 22 (27%); 11-15: 14 (17%);16-20: 14 (17%); >20: 4 (5%); Other: 20 (24%)

Where do you store scrapple?

Refrigerator: 75 (71%); Freezer: 11 (10%);either 20 (19)

Informal Consumer Scrapple Survey

Adekunle et al., J. Food Prot., 2010

Page 25: Managing Pathogens in Foods: A Post-Harvest Perspective!

Viability of L. monocytogenes on pork scrapple

(N=3; n=3)

Adekunle et al., J. Food Prot., 2010

Page 26: Managing Pathogens in Foods: A Post-Harvest Perspective!

Re-Heating Pork Scrapple

0

1

2

3

4

5

6

7

8

0 0.5 1 2 3 4

Time (minutes)

Log

CFU

/g

1.3 cm thick 1.9 cm thick

Re-heating for 0.5 to 4.0 min per side reduced pathogen numbers by :

ca. 1.0 to 6.5 log CFU/g for 1.3 cm thick slicesca. 0.7 to 2.1 log CFU/g for 1.9 cm thick slices

Adekunle et al., J. Food Prot., 2010

Page 27: Managing Pathogens in Foods: A Post-Harvest Perspective!

Talking Points…• Scrapple provides a favorable environment for

growth of L. monocytogenes– high moisture content (70%), high water activity (aw 0.97)

low salt level (1.2%), and a favorable pH (pH 6.4)• Re-heating as practiced by consumers surveyed

eliminates the pathogen• Food grade chemicals being evaluated both “in”

and “on” scrapple for pathogen control

Adekunle et al., J. Food Prot., 2010

Page 28: Managing Pathogens in Foods: A Post-Harvest Perspective!

“Non-Intact Beef Project”

– 1994 – Ground beef adulterated if contaminated with E. coli O157:H7 (USDA/FSIS)

– January 1999 – Raw non-intact beef adulterated if contaminated with E. coli O157:H7 (USDA/FSIS)

– May 1999 – Publication on translocation and thermal inactivation of E. coli O157:H7 in non-intact beef (Sporing et al., Kansas State)

– January 2002 – Report from National Advisory Committee Microbiological Criteria for Food (NACMCF) on non-intact beef – no added risk, research voids identified

– March 2002 – Comparative risk assessment for intact and non-intact beef (USDA/FSIS)

– October 2003 – NCBA funded research on tenderization and cooking of subprimals (Luchansky et al., ARS, Wyndmoor, PA)

– January 2008 - Formal request from USDA/FSIS to ARS for Non-Intact Beef Research

Genesis

Translocation and Thermal Inactivation of Shiga-toxin Producing Escherichia coli in Non-Intact Beef

Page 29: Managing Pathogens in Foods: A Post-Harvest Perspective!

Validation of Methods for Blade Tenderization and Cooking

Luchansky et al., 2008. Translocation of surfaceinoculated Escherichia coli O157:H7 into beefsubprimals following blade tenderization. J. FoodProt. 71:2190-2197.

Luchansky, et al., 2009. Thermal inactivation ofEscherichia coli O157:H7 in blade tenderizedbeef steaks cooked on a commercial open-flamegas grill. J. Food Prot. 72:1404-1411.

Luchansky, J. B., 2008. Thermal inactivation of E. coli O157:H7 in blade tenderized beef steaks cooked on a commercial open-flame gas grill. Abstracts of the International Conference of the International Committee on Food Microbiology and Hygiene (ICFMH), Aberdeen, Scotland (PV-15), p383.

Page 30: Managing Pathogens in Foods: A Post-Harvest Perspective!

Tenderizer in Open Position Showing Blades

Ross TC 7000M(Ross Industries, Midland, VA)

Page 31: Managing Pathogens in Foods: A Post-Harvest Perspective!

Coring of Subprimals

Diameter: 3.5cmLength: 15cm

USDA Institutional Meat Purchase Spec. #184

1

3

2

7

4

6

5

109

8

Page 32: Managing Pathogens in Foods: A Post-Harvest Perspective!

Segmentation and Sampling of Cores

Fat side

Lean side

Tenderized side

Page 33: Managing Pathogens in Foods: A Post-Harvest Perspective!

Cooking and Sampling of Steaks

Baker’s Pride, New Rochelle, NY

S1

S2S3

Q1 Q2

Q3Q4

Page 34: Managing Pathogens in Foods: A Post-Harvest Perspective!

• Lean vs fat side surface inoculation/tenderization• Single vs double pass tenderization• Five inoculation levels: 0.5, 1.5, 2.5, 3.5, and 6.0 log10 CFU/g• 5-strain cocktail of rifampicin-resistant E. coli O157:H7• 5-strain cocktail of kanamicin-resistant non-O157:H7 STEC• Top-butt beef subprimals purchased at wholesale

- 5 inoculation levels x 4 subprimals per inoculation level x 2 trials per inoculation level x 10 core samples per subprimal x 2 pathogen types = 800 total core samples

• 10 core samples cut into six consecutive segments - Segments 1 to 4 comprised the top four cm of the core- Segments 5 and 6 (and 7) comprised the lowest four cm

“Non-Intact Beef Project”

Page 35: Managing Pathogens in Foods: A Post-Harvest Perspective!

Recovery of ECOH from segmented core samples of subprimals inoculated with ca. 3.5 log CFU/g

Tenderized subprimalSegment #

ECOH3.19 ± 3.21a

(JFP 71:2190, 2008)

ECOH

% Transfer

1 2.70 ± 2.78 52

2 1.85 ± 2.44 2.0

3 0.35 ± 1.02 0.2

4 -0.8 ± 0.0 0.05

5 0.61 ± 1.22 0.01

6 0.40 ± 1.02 0.3

Total 2.76 54

• Majority of E. coli transferred into segment 1 (52 to 65%)• Linear decrease in pathogen levels from segment 2 to segment 6• Total levels transferred into all six segments ranged from 54 to 67%• Lower starting levels, transfer to all segments, but most in segment 1• Higher starting levels, no greater transfer of cells into deeper tissues

Page 36: Managing Pathogens in Foods: A Post-Harvest Perspective!

Tenderization + Cooking

•Lean side inoculation/tenderization•Single pass through tenderizer•Steak thickness of 1.0 and 1.5 inch•Cooking at 120° to 160°F internal

Page 37: Managing Pathogens in Foods: A Post-Harvest Perspective!

Recovery of ECOH (log CFU/g) from non-intact steaks inoculated with a target level of 6.0 log CFU/g that were segmented after cooking

ECOHTemperature (°F)

Thickness(inches)

Total Steak(all strips + all quarters)

0 1 6.44a

1.5 6.08a

120 1 2.32b

1.5 1.88b

130 1 2.58b

1.5 2.15b

140 1 1.93b

1.5 1.99b

150 1 2.15b

1.5 1.72b

160 1 2.50b

1.5 1.52b

• Regardless of thickness of the steak or cooking temperature, there were no statistical differences (P < 0.05) in the extent of thermal inactivation of ECOH in tenderized beef.

• For ECOH, cooking steaks at 120° to 160°F resulted in reductions of ca. 4.0 log CFU/g.

Page 38: Managing Pathogens in Foods: A Post-Harvest Perspective!

The Road Ahead…• Conduct studies on chemical enhancement of subprimals and

subsequent cooking of steaks• Perform exploratory experiments on treatment of subprimals prior to

tenderization/enhancement• Evaluate combined effects of contact time/temperature and

antimicrobials on blade sanitation as appropriate• Complete growth/inactivation modeling and computer simulations• Validate growth and inactivation models using translocation and

cooking data collected on pilot-scale tenderizer/injector and gas grill

Page 39: Managing Pathogens in Foods: A Post-Harvest Perspective!

Microbial Food Safety Research UnitFood Product Association Food Safety Award – 2006

International Association for Food Protection

CORE STRENGTHS• Detection/typing of pathogens & threat agents• Genomic and proteomic analyses of pathogens and their

persistence in foods and pathogenicity in hosts• Microbial modeling in food environments• Pilot scale validation of biological, chemical, and thermal

interventions to control pathogens & threat agents during food production, storage, and preparation

Page 40: Managing Pathogens in Foods: A Post-Harvest Perspective!

Acknowledgments

• Nelly Osoria• Jean Smith• John Cherry• Jennifer Levy• Chun-Wing Yu• Jim Hodges (AMI)• Michelle Rossman (NCBA)• Randy Huffman (Maple Leaf)• Tim Freier (Cargill)• John Sofos (CSU)

• Nate Bauer• Carl Schroeder• Tim Mohr• Heejeong Latimer• Paul Uhler• Bill Shaw• Mimi Sharar• Janell Kause• Mike Doyle (UGA)• Peggy Tomasula (DPPRU)• Randy Phebus (KSU)• Reddi Harshavardan (UNL)

Jeff Call, Anna Porto-Fett, Brad Shoyer, Jean Smith, Alan Oser, & Steve Campano

Page 41: Managing Pathogens in Foods: A Post-Harvest Perspective!

ANY QUESTIONS?

THANK YOU FOR YOUR ATTENTION!

[email protected]://www.ars.usda.gov/naa/errc

Page 42: Managing Pathogens in Foods: A Post-Harvest Perspective!

ERRC Stakeholder


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