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Modelling from Sequence to Gene Regulatory Network to Phenotype
Network Expression
The gene regulation network expresses as gene activation over time
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Time
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State Spaces
If the system state at a given time step is determined by the previous system state, the dynamics can settle into ‘basins of attraction’, in which the system is robust to perturbation.
But some changes can push the system to different behaviour.
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System State After Single Perturbations
System State After Single Perturbations
Perturbation
System State After Single Perturbations
System State After Single Perturbations
Perturbation
System State After Single Perturbations
System State After Single Perturbations
Perturbation
System State After Single Perturbations
System State After Single Perturbations
Perturbation
System State After Single Perturbations
The dynamics of the system have changed
System State After Single Perturbations
Perturbation
System State After Single Perturbations
The system has changed again
Such complex systems dynamics are being studied in modelsof gene regulation
System State After Single Perturbations