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Norovirus and Twitter - GSS data analysis competition 2015

Date post: 15-Apr-2017
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Using Twitter to predict Norovirus outbreaks David Millson on behalf of Callum Staff
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Page 1: Norovirus and Twitter - GSS data analysis competition 2015

Using Twitter to predict Norovirus

outbreaks

David Millsonon behalf of Callum Staff

Page 2: Norovirus and Twitter - GSS data analysis competition 2015

THE PROJECT

Page 3: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Predicting and reducing Norovirus

• Tweets discussing Norovirus and its symptoms were first identified as a

proxy indicator for Norovirus cases through an MSc project

• Outbreaks are predicted using rises in tweets about Norovirus

symptoms (diarrhoea and vomiting)

• Predictions are used to inform FSA and NHS Choices interventions

• Interventions can prevent outbreaks from getting out of control by

encouraging sufferers to stay at home and avoid passing the bug on

Page 4: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Citizen Need / Business Need

• Citizen Need:

• More timely surveillance = quicker reactions = more cases prevented

• Lower burden on economy and public

• Business Need:

• To understand the predictive power of social media data

• Demonstrate to Government the value of including social media

analysis in surveillance strategy

Page 5: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

FSA and social media analysis – from little acorns

• Cabinet Office approached the FSA to pilot a joint project with Ipsos

MORI using machine learning to categorise Tweets

• Led in producing cross-government guidance on social media research

• Set up a review and innovation group to bring the expertise of industry

and academia to Government social media research

• Designed and presented workshop on using social media in policy and

analysis

Page 6: Norovirus and Twitter - GSS data analysis competition 2015

BUILDING THE MODEL

Page 7: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Crowd-sourcing the keywords

Page 8: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Excluding bad keywords

Page 9: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Do people really tweet when they have Norovirus?

Page 10: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

The trade-off between usefulness and rigour

• We can rigorously predict Norovirus cases three weeks after they

happen

• To be useful to Communications, we need to predict them three weeks

before they happen

Tweets

Community cases

Page 11: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

The trade-off between usefulness and rigour

• We can rigorously predict Norovirus cases three weeks after they

happen

• To be useful to Communications, we need to predict them three weeks

before they happen

Tweets

Community cases

Page 12: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Calibrating the Cut Off Value

Page 13: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Calibrating the Cut Off Value

0.35

Page 14: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Calibrating the Cut Off Value

0.30

Page 15: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Calibrating the Cut Off Value

0.25

Page 16: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Calibrating the Cut Off Value

0.20

Page 17: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Calibrating the Cut Off Value

0.25

Page 18: Norovirus and Twitter - GSS data analysis competition 2015

USING THE RESULTS

Page 19: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Outbreak predicted

Outbreak reduced (hopefully)

Page 20: Norovirus and Twitter - GSS data analysis competition 2015

VALUE FOR MONEY

Page 21: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Value for Money

• Cost of the project

• One analyst working approx. one day a week for 2/3 year ~ £2,500

• NHS Choices spend/external research brings total to approx. £20,000

• Cost of Norovirus

• Estimated 2.8 million cases in the UK a year at a cost of £120 million

WOULD NEED TO PREVENT JUST 500 CASES A YEAR, OR 0.02% OF

THE TOTAL, TO BE PROVIDING VALUE FOR MONEY

Page 22: Norovirus and Twitter - GSS data analysis competition 2015

NEXT STEPS

Page 23: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Spatial Mapping

Page 24: Norovirus and Twitter - GSS data analysis competition 2015

© 2015 Food Standards Agency

Summary

• A marriage of “supply” and “demand”:

• Twitter identified as a measure of Norovirus, providing information

much more rapidly than lab reports

• A need to roll out public information on Norovirus at the right time to

make the biggest impact

• A gateway project to demonstrate the value of social media analysis

• Low cost and therefore low risk, with potentially high rewards


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