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Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim :...

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Organic Synthesis I n text : Adv. Org. Syn. (4 th Ed.) Part B, Care : acquiring various reactions and synthetic strategies to design synthetic routes for target molecules Other texts & ref. : a) Designing Organic Synthesis – S. Warren b) Modern Organic Synthesis – D. L. Boger c) Advanced Organic Chemistry – J. March d) Modern Methods of Organic Synthesis (4 th Ed.) – W. Carr e) Organic Synthesis (2 nd Ed.) – J. Furhop, G. Penzlin f) Classics in Total Synthesis I, II – K.C. Nicolaou g) The Logic of Chemical Synthesis – E. J. Corey
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Page 1: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Organic Synthesis I

1. Main text : Adv. Org. Syn. (4th Ed.) Part B, Carey & Sundberg

2. Aim : acquiring various reactions and synthetic strategies to design synthetic routes for target molecules

3. Other texts & ref. : a) Designing Organic Synthesis – S. Warrenb) Modern Organic Synthesis – D. L. Bogerc) Advanced Organic Chemistry – J. Marchd) Modern Methods of Organic Synthesis (4th Ed.) – W. Carrutherse) Organic Synthesis (2nd Ed.) – J. Furhop, G. Penzlinf) Classics in Total Synthesis I, II – K.C. Nicolaoug) The Logic of Chemical Synthesis – E. J. Corey

Page 2: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

The molecular world

moleculesof

value

moleculesfrom

synthesis

synthetic products of

valuedecrease

complexityincrease

complexity

Page 3: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

What will be covered in Org. Syn. I

Chapter 1 : Alkylation – carbanionChapter 2 : Reaction of Carbon Nu: w/ carbonylChapter 3 : Functional group interconversionChapter 5 : Reduction of Carbonyl etc.Chapter 7 : Organometallic – main groupChapter 12 : OxidationChapter 13 : Planning and Execution** Named Reactions**** Reaction Mechanism**

Homework : Selected problems from each chapter

Page 4: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

ORGANIC SYNTHESIS

TOTAL SYNTHESIS (target oriented)

Method Oriented

Reagent Catalyst Strategy TacticsNaturalProducts

DesignedMolecules

TheoreticallyInterestingMolecules

MedicinallyInterestingMolecules

BiologicallyInterestingMolecules

MateriallyInterestingMolecules

Page 5: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Reaction Mechanism (or reasonably drawn detailed reaction pathway) is important

-- Examples --

OH

O

+ MeOHH2SO4 (cat.)

MeOHO

Oi) esterification

H

O

+ MeOHTsOH (cat.)

CH2Cl2O

Oii) acetals

H

O10%NaOH

Acetone H

HO Oiii) aldol

J. Am. Chem. Soc., 1914, 36, 530

H

O

50%NaOH

water

OH

ONa

O

+

iv) Cannizzaro rxn.

Page 6: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

OH

O

H+

OH

OH

esterification

acetals

MeOHOH

OH

HOMe

OH

OH2

OMe

OH

OMe

H+O

OMe

H2O

H

O

H+

H

OH

MeOHH

OH

HOMe

H

OH2

OMe

H

OMe

H2O

MeOHH

HO

OMe

Me

H+

H

O

OMe

Me

Page 7: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

H

O

H

OH-

H2O H

Oaldol

H

O

OH-

H

O

OH

Cannizzaro rxn.

H

O

H

O

O O

OH-

H

O

HOH

OH-

H

O

O

O

O

H

O

H

O

H+

Page 8: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Classification of Organic Synthesis

1. Linear Synthesis : tedious, inefficient but could be simple ex.) DNA, Peptide Synthesizer

2. Convergent Synthesis -- economic, time saving

3. Divergent Synthesis -- SAR, Combichem.

4. Biosynthesis driven Synthesis -- biomimetic synthesis

5. Symmetry considered synthesis -- simplification

6. Systematic Synthetic analysis and design

Page 9: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Objective of Organic Synthesis

1. Target : to be conquered ---- speed, elegance

2. Structural Information ---- unambiguous

3. S. A. R. : for design ---- creativity

4. Usefulness ---- economy

Page 10: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Chronology of Organic Synthesis

- 19C. Europe : Industry driven – Dyestuff, Aspirin- America : Weak Industry – more academic

1. Cope : PennState, MIT

2. Woodward : creativity3. Stork : 3-dimensional world

4. Corey : Logic5. Kish : managing

Page 11: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

** Perception of a target **1. Static -- shape -- Design2. Dynamic -- relationship -- Control

** Things to Consider **1. Connectivity -- symmetry, complexity2. Stereochemical relationship3. Functionality -- substructures4. Reactivity : Stability -- air, heat, light, acid, base ……5. Compatibility6. Kinetic vs. Thermodynamic relationship

7. Products -- volatile, syrup, solubility in water, hazard, smell…..8. Characterization of the target molecules

Page 12: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Synthetic Chemistry in the 21st Century

Ideal Synthesis

safe simple

100% yield

Availablematerial

One step

Environmentally acceptable

Resource efficient

Page 13: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Graphite1 step

44%fullerenes (C60, C70), nanotubes

1 operation

n

OPPH

H

TaxadieneSynthase

Page 14: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Pinene

OHO BzO

OOAc

OH

OH

O

Ph O

O

Taxol

36 steps !!

Page 15: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

" There is excitement, adventure, and challenge, and there can be

great art in organic synthesis."

-These alone should be enough, and organic chemistry will be sadder when none of its practitioners are reponsive to these

stimuli.-

" The structure known but not yet accessible by synthesis, is to the chemist what the

unclimbed mountain, the uncharted sea, the untilled field, the unreached planet, are to other man."

R.B. Woodward

Page 16: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

" The organic chemist is

more than a logician and strategist; he is an

explorer strongly influenced to speculate, to imagine, and

even to create."

E.J. Corey

Page 17: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

"When we have been faced with a problem of affecting a

chemical synthesis

we have sought known methods.

We have not paused to think why we do not invent a new method every time. If we

adopt this philosophy we are going to be extremely busy till the end of the century

(a) trying to equal the enzymes, and

(b) thinking of new ways of synthesis."

Sir Derek.H.R. Barton

Page 18: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

"in defining strategies and reactions to construct complex molecules we require

synthetic methods that can

i) perform a wanted structural change and none other -

chemoselectiveii) orient the reacting partners in a correct fashion -

regioselectiveiii) create the correct orientations of the various parts of the molecules with respect to

each other - diastereoselectiveiv) enable the formulation of a molecule of one handedness or a mirror isomer -

enantioselective.Such extraordinary demands are exciting challenges."

Barry M. Trost

Page 19: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Beginning of Organic Chemistry

NH4+CNO-

H2N NH2

Oheat

Woehler (1828)

Beginning of Organic Synthesis

Kolbe (1845)

CS2heat

C + S8Cl2light

CCl4

heat

Cl

Cl

Cl

Cli) OH-

ii) ZnCH3COOH

Page 20: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

H2N NH2

O

OH

O

O OH

OHHO

OH

HO

HO

Woehler (1828) Kolbe (1845) Fisher (1890) Perkin (1904)

Stork (2001)

N

O

O

H

N

N

OH

MeO

Robinson (1917) Bachmann (1939) Woodward (1944)

Page 21: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

HO

Terpinol

NC COOEt

i) NaOEt

ii)

ICOOEt

NC COOEt

COOEt

i) NaOEt

ii)

ICOOEt

NC COOEt

EtOOCEtOOC

HCl

COOH

HOOCHOOCAc2O

COOH

O

MeMgI

COOH

OH

HBr; NaOH

COOH

HCl/EtOH

COOEt

MeMgI

Page 22: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

N

N

OO

NH

N

MeOOC O

OMe

O

OMe

OMe

OMe

N N

NNH2NOC

H2NOC

CONH2

CONH2

CONH2

NH

O

O

O

O

HO

N

O

O

N

OH

H2NOC

Co

CN

O

O

O

OH

OH

HO OH

(1954)

(1958)

(1973)

(1978)

" Given enough manpower and money, synthetic chemist can make any complex molecule"

Page 23: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Provide a reasonable arrow-pushing mechanism for the following reaction

Answer

Page 24: Organic Synthesis I 1. Main text : Adv. Org. Syn. (4 th Ed.) Part B, Carey & Sundberg 2. Aim : acquiring various reactions and synthetic strategies to.

Provide a reasonable arrow-pushing mechanism for the following reaction

OH

OSOCl2

Cl

O

Br2, HBr (cat.)OO OO

Br

i) MeMgBr

O

EtO

ii) aq. H2SO4

O

i) I2 (3 eq.), pyridine, heat

ii) NaOH; HCl

HO

O

HO

O

OH

06-03-08


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