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Origins and dynamics of new Self- Incompatibility alleles in plants An example of diversification with coevolution Camille Gervais, Vincent Castric, Adrienne Ressayre, Sylvain Billiard Université Lille 1 / INRA Moulon - France ANR MANEGE, 2011
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Page 1: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Origins and dynamics of new Self-Incompatibility alleles in plantsAn example of diversification with coevolution

Camille Gervais, Vincent Castric, Adrienne Ressayre, Sylvain Billiard

Université Lille 1 / INRA Moulon - France

ANR MANEGE, 2011

Page 2: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

• Present in dozens Angiosperms families

(e.g. Solanaceae, Brassicaceae, ...)

introduction

Page 3: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Self-Incompatibility in plants

• Molecular recognition that prevents selfing and some cross-fertilization

• Up to 200 SI haplotypes thanks to the advantage of the rare (Wright 1939)

(or negative frequency dependent-selection)

Proteins

S-locus

introduction

Page 4: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Red phenotype is common

→ - potential mates

→ unfavored

introduction

Page 5: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

White is self-compatible and compatible with anyone

introduction

Page 6: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

The problem of S diversification

• Easy to understand how such a large diversity is maintained (Wright 1939)

• Hard to understand how it can be generated (sir R.A. Fisher 1961)

POLLEN PISTIL

POLLEN PISTIL

Mutation

Recognition: Self-Incompatible

Non- Recognition: Self-Compatible

Self-Compatible haplotype can invade → SI Loss → Coevolution is necessary

introduction

Page 7: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Uyenoyama et al. (2001)’s model

POLLEN PISTIL

POLLEN PISTIL

POLLEN PISTILMUTATION 2

= compensatory mutation

MUTATION 1

Mutation

Ancestral

New S-haplotype

Intermediate Self-Compatible

introduction

Page 8: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Uyenoyama et al. (2001)’s model

POLLEN PISTIL

POLLEN PISTIL

POLLEN PISTILMUTATION 2

= compensatory mutation

MUTATION 1

Mutation

Ancestral

New S-haplotype

Intermediate Self-CompatibleX

→ SI system remains unchanged

introduction

Page 9: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Uyenoyama et al. (2001)’s model

POLLEN PISTIL

POLLEN PISTIL

POLLEN PISTIL

MUTATION 2

= compensatory mutation

MUTATION 1

Mutation

Ancestral

New S-haplotype

Intermediate Self-Compatible

X

→ SI system is lost

X

introduction

Page 10: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

The model (based on Uyenoyama et al.2001)

POLLEN PISTIL

ASSUMPTIONS-Unstructured population with S diploid individuals

- Bipartite S-locus

- Inbreeding depression δ = decreased viability of selfed offspring

- Self-pollination rate α

-Initial number of S-haplotypes n

-Max number of different alleles Kα 1-α

model

Page 11: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

POLLEN i PISTIL i

POLLEN j PISTIL j

POLLEN n PISTIL n

POLLEN n+1 PISTIL n

POLLEN n+1 PISTIL n+1

ii

j

n (ancestral)

b

n+1 (new)

model

Description

Page 12: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

POLLEN i PISTIL i

POLLEN j PISTIL j

POLLEN n PISTIL n

POLLEN n+1 PISTIL n

POLLEN n+1 PISTIL n+1

ii

j

n (ancestral)

b

n+1 (new)

model

What may happen...

Page 13: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Reproduction+ Viability selection

RecurrentMutation

modelmodelmodel

Page 14: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

deterministic outcomes

Page 15: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

model: deterministic behaviour

Page 16: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

xuv

frequency of genotype uv

Suv

selfing rate of genotype uv

Nuv

proportion of compatible pollen received by genotype uv

pb frequency of allele b

p frequency of allele iW mean fitness (normalization term because of selection)

model

Page 17: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

deterministic outcomes

4 interesting equilibria

Page 18: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

n = 5

deterministic outcomes

Page 19: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

REPLACEMENT

SI LOSS

UNCHANGEDDIVERSIFICATION

n = 5

deterministic outcomes

Page 20: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

n = 3 n = 4 n = 5

n = 6 n = 7 n = 8

deterministic outcomes

Page 21: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

REPLACEMENT

SI LOSS

UNCHANGEDDIVERSIFICATION

stochastic outcomes

N = 5, K=20, u=5.10-7, S=5000

Page 22: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Diversification probability in finite populations

100 replicates

n = 5

100% diversification

(n > 5)

0% diversification

(0 < n < 5)

stochastic outcomes

Page 23: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

n with time

α = 0.4

α = 0.2

α = 0.2

α = 0.2

stochastic outcomes

Page 24: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

back to data

e.g. In Solanaceae(Richman & Kohn 1999)

Page 25: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

e.g. In Brassicaceae (B. rapa)(Takuno et al. 2007)

back to data

POLLENPISTIL

Page 26: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

back to data

Allele number(Castric & Vekemans 2004)

Page 27: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

going further

Page 28: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

going further

Best model of diversification at the S-locus?

Decaying diversification rate with increasing diversity: a general property?

Best model of speciation(Morlon et al. 2010)

Page 29: Origins and dynamics of new Self- Incompatibility …anr-manege/agay/Billiard.pdfOrigins and dynamics of new Self-Incompatibility alleles in plants An example of diversification with

Decaying diversification rate with increasing diversity: a general property?

Looking for analogs: speciation with coevolution?


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