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Ph.D. Tomas Plankis Vilnius University [email protected]€¦ · Supercomputer SGI Altix 4700...

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Ph.D. Tomas Plankis Vilnius University [email protected]
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Page 1: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Ph.D. Tomas Plankis Vilnius University 

 [email protected] 

Page 2: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Faculty of Mathema/cs and Informa/cs 

Page 3: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Supercomputer 

  SGI Altix 4700   Sun Fire X4100  New supercomputer (1500 cores, 600 TB)  Distributed computing network   Software 

Page 4: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network
Page 5: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

“Personnel” Scientists  Students 

  We have a lot high class specialists to do research in many different fields 

  A lot of students, who could help in research and experiments 

  A lot of students, who could be teached the newest knowledge 

Page 6: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Short about... myself 

  6 years experience in healthcare   one of the developers of patients management system   experience in data management   experience in medical systems   experience in interoperability 

Page 7: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Doctor’s needs 

Page 8: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Medical Systems 

X‐ray  MRI (magnetic resonance imaging) 

ECG (electrocardiography)  EEG (electroencephalography) 

Microscopy  etc... 

Page 9: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Data Analysis 

 Analyse tests’ data and give some preliminary conclusions 

 Analyse patients records to show possible health problems in the future or with the prescription 

Page 10: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Repository of Knowledge and 

Data Access 

 To be able to access all new knowledge in an instant  To have some sort of registry  To be able to use gathered information directly for teaching or learning purposes 

 Etc. 

Page 11: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

GRID as a Distributed System 

 GRID ‐ the combination of computer resources from multiple administrative domains to reach a common goal 

 Grids are a form of distributed computing whereby a “super virtual computer” is composed of many networked computers acting together to perform very large tasks 

Page 12: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

What can we have from GRIDS?  We can have resources on demand. For example we can get huge computational power when we need it. 

 We can create a “virtual network” to exchange data between health care facilities. That means, that we do not need to store all medical records about one pacient in one “center”, but rather we can access it if we need it. What’s more important, we don’t need to know where that data is. This solves few problems like: huge storages or slow obtaining of data. 

Page 13: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

What do we have? 

Page 14: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

National Health Insurance Fund 

Page 15: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

What can we have? 

Page 16: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

GRID 

Page 17: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

Anonymization 

Repository (Cloud) 

Analytical server 

(Supercomputer) 

Deanonymization 

Private and everyday usage 

Data access for curing, teaching or learning, trauma registries, 

etc. 

Page 18: Ph.D. Tomas Plankis Vilnius University tomas.plankis@mif.vu€¦ · Supercomputer SGI Altix 4700 Sun Fire X4100 New supercomputer (1500 cores, 600 TB) Distributed computing network

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