Poplar Publications Genetics and Molecular Biology..."Identification of Quantitative Trait Loci and...

Poplar Publications

Genetics and Molecular Biology

Abraham, P. E., X. Wang, P. Ranjan, I. Nookaew, B. Zhang, G. A. Tuskan, and R. L. Hettich. 2015.

"Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural

Protein Sequence Variants of Populus Trichocarpa." Journal of Proteome Research 14 (12): 5318-5326.

doi:10.1021/acs.jproteome.5b00823. http://pubs.acs.org (accessed May 24, 2016).

Abraham, P., R. M. Adams, G. A. Tuskan, and R. L. Hettich. 2013. "Moving Away from the Reference

Genome: Evaluating a Peptide Sequencing Tagging Approach for Single Amino Acid Polymorphism

Identifications in the Genus Populus." Journal of Proteome Research 12 (8): 3642-3651.

doi:10.1021/pr400192r. http://pubs.acs.org (accessed June 14, 2016).

Abraham, P., R. J. Gannone, R. M. Adams, U. Kalluri, G. A. Tuskan, and R. L. Hettich. 2013. "Putting the

Pieces Together: High-Performance LC-MS/MS Provides Network-, Pathway-, and Protein-Level

Perspectives in Populus." Molecular and Cellular Proteomics 12 (1): 106-119.

doi:10.1074/mcp.M112.022996. www.scopus.com (accessed June 15, 2016).

Abraham, P., R. Adams, R. J. Giannone, U. Kalluri, P. Ranjan, B. Erickson, M. Shah, G. A. Tuskan, and R. L.

Hettich. 2012. "Defining the Boundaries and Characterizing the Landscape of Functional Genome

Expression in Vascular Tissues of Populus using Shotgun Proteomics." Journal of Proteome Research 11

(1): 449-460. http://pubs.acs.org (accessed May 17, 2016).

Adams, J. P., A. Adeli, C. -Y Hsu, R. L. Harkess, G. P. Page, C. W. dePamphilis, E. B. Schultz, and C. Yuceer.

2012. "Plant-Based FRET Biosensor Discriminates Environmental Zinc Levels." Plant Biotechnology

Journal 10 (2): 207-216. http://onlinelibrary.wiley.com (accessed May 17, 2016).

Alluvada, J., M. Fokar, and A. S. Holaday. 2014. "Variation in Gene Transcription and Protein for Key

Enzymes of Carbohydrate Metabolism in Poplar Xylem with Respect to Growth Phase." Acta

Physiologiae Plantarum 36 (9): 2385-2395. doi:10.1007/s11738-014-1611-z.

http://download.springer.com (accessed June 8, 2016).

Babst, B. A., H. -Y Chen, H. -Q Wang, R. S. Payyavula, T. P. Thomas, S. A. Harding, and C. -J Tsai. 2014.

"Stress-Responsive Hydroxycinnamate Glycosyltransferase Modulates Phenylpropanoid Metabolism in

Populus." Journal of Experimental Botany 65 (15): 4191-4200. doi:10.1093/jxb/eru192.

https://jxb.oxfordjournals.org (accessed June 8, 2016).

Banerjee, A., Y. Wu, R. Banerjee, Y. Li, H. Yan, and T. D. Sharkey. 2013. "Feedback Inhibition of Deoxy-D-

Xylulose-5-Phosphate Synthase Regulates the Methylerythritol 4-Phosphate Pathway." Journal of

Biological Chemistry 288 (23): 16926-16936. doi:10.1074/jbc.M113.464636. http://www.jbc.org

(accessed June 14, 2016).

Biswal, A. K., Z. Hao, S. Pattathil, X. Yang, K. Winkeler, C. Collins, S. S. Mohanty, et al. 2015.

"Downregulation of GAUT12 in Populus Deltoides by RNA Silencing Results in Reduced Recalcitrance,

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Increased Growth and Reduced Xylan and Pectin in a Woody Biofuel Feedstock." Biotechnology for

Biofuels 8 (1). doi:10.1186/s13068-015-0218-y. http://biotechnologyforbiofuels.biomedcentral.com

(accessed May 31, 2016).

Breen, A. L., D. F. Murray, and M. S. Olson. 2012. "Genetic Consequences of Glacial Survival: The Late

Quaternary History of Balsam Poplar (Populus Balsamifera L.) in North America." Journal of

Biogeography 39 (5): 918-928. http://onlinelibrary.wiley.com (accessed May 17, 2016).

Carraro, N., T. E. Tisdale-Orr, R. M. Clouse, A. S. Knöller, and R. Spicer. 2012. "Diversification and

Expression of the PIN, AUX/LAX, and ABCB Families of Putative Auxin Transporters in Populus." Frontiers

in Plant Science 3 (FEB). doi:10.3389/fpls.2012.00017. http://digitalcommons.conncoll.edu (accessed

June 17, 2016).

Chen, H. -Y, B. A. Babst, B. Nyamdari, H. Hu, R. Sykes, M. F. Davis, S. A. Harding, and C. -J Tsai. 2014.

"Ectopic Expression of a Loblolly Pine Class II 4-Coumarate:CoA Ligase Alters Soluble Phenylpropanoid

Metabolism but Not Lignin Biosynthesis in Populus." Plant and Cell Physiology 55 (9): 1669-1678.

doi:10.1093/pcp/pcu098. https://pcp.oxfordjournals.org (accessed June 8, 2016).

Chen, H. -C, J. Song, C. M. Williams, C. M. Shuford, J. Liu, J. P. Wang, Q. Li, et al. 2013. "Monolignol

Pathway 4-Coumaric Acid: Coenzyme A Ligases in Populus Trichocarpa: Novel Specificity, Metabolic

Regulation, and Simulation of Coenzyme a Ligation Fluxes." Plant Physiology 161 (3): 1501-1516.

doi:10.1104/pp.112.210971. http://www.plantphysiol.org (accessed June 15, 2016).

Chen, Y., Y. S. Yordanov, C. Ma, S. Strauss, and V. B. Busov. 2013. "DR5 as a Reporter System to Study

Auxin Response in Populus." Plant Cell Reports 32 (3): 453-463. doi:10.1007/s00299-012-1378-x.


Cheng, A. -X, J. -Y Gou, X. -H Yu, H. Yang, X. Fang, X. -Y Chen, and C. -J Liu. 2013. "Characterization and

Ectopic Expression of a Populus Hydroxyacid Hydroxycinnamoyltransferase." Molecular Plant 6 (6):

1889-1903. doi:10.1093/mp/sst085. http://www.sciencedirect.com (accessed June 13, 2016).

Coleman, H. D., F. M. Cánovas, H. Man, E. G. Kirby, and S. D. Mansfield. 2012. "Enhanced Expression of

Glutamine Synthetase (GS1a) Confers Altered Fibre and Wood Chemistry in Field Grown Hybrid Poplar

(Populus Tremula X Alba) (717-1B4)." Plant Biotechnology Journal 10 (7): 883-889. doi:10.1111/j.1467-

7652.2012.00714.x. http://onlinelibrary.wiley.com (accessed June 16, 2016).

Cushman, S. A., T. Max, N. Meneses, L. M. Evans, S. Ferrier, B. Honchak, T. G. Whitham, and G. J. Allan.

2014. "Landscape Genetic Connectivity in a Riparian Foundation Tree is Jointly Driven by Climatic

Gradients and River Networks." Ecological Applications 24 (5): 1000-1014. doi:10.1890/13-1612.1.

http://onlinelibrary.wiley.com (accessed June 9, 2016).

Czarnecki, O., J. Yang, X. Wang, S. Wang, W. Muchero, G. A. Tuskan, and J. -G Chen. 2014.

"Characterization of MORE AXILLARY GROWTH Genes in Populus." PLoS ONE 9 (7).

doi:10.1371/journal.pone.0102757. http://journals.plos.org (accessed June 6, 2016).

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Difazio, S. P., S. Leonardi, G. T. Slavov, S. L. Garman, W. T. Adams, and S. H. Strauss. 2012. "Gene Flow

and Simulation of Transgene Dispersal from Hybrid Poplar Plantations." New Phytologist 193 (4): 903-

915. http://onlinelibrary.wiley.com (accessed May 17, 2016).

Ding, J., H. Hu, and X. Li. 2012. "Thousands of Cis-Regulatory Sequence Combinations are Shared by

Arabidopsis and Poplar." Plant Physiology 158 (1): 145-155. http://www.plantphysiol.org (accessed May

17, 2016).

Drost, D. R., S. Puranik, E. Novaes, C. R. D. B. Novaes, C. Dervinis, O. Gailing, and M. Kirst. 2015.

"Genetical Genomics of Populus Leaf Shape Variation." BMC Plant Biology 15 (1). doi:10.1186/s12870-

015-0557-7. http://bmcplantbiol.biomedcentral.com (accessed May 27, 2016).

Elias, A. A., V. B. Busov, K. R. Kosola, C. Ma, E. Etherington, O. Shevchenko, H. Gandhi, D. W. Pearce, S. B.

Rood, and S. H. Strauss. 2012. "Green Revolution Trees: Semidwarfism Transgenes Modify Gibberellins,

Promote Root Growth, Enhance Morphological Diversity, and Reduce Competitiveness in Hybrid Poplar."

Plant Physiology 160 (2): 1130-1144. doi:10.1104/pp.112.200741. http://www.plantphysiol.org


Elorriaga, E., R. Meilan, C. Ma, J. S. Skinner, E. Etherington, A. Brunner, and S. H. Strauss. 2014. "A

Tapetal Ablation Transgene Induces Stable Male Sterility and Slows Field Growth in Populus." Tree

Genetics and Genomes 10 (6): 1583-1593. doi:10.1007/s11295-014-0781-6.


Evans, L. M., G. T. Slavov, E. Rodgers-Melnick, J. Martin, P. Ranjan, W. Muchero, A. M. Brunner, et al.

2014. "Population Genomics of Populus Trichocarpa Identifies Signatures of Selection and Adaptive Trait

Associations." Nature Genetics 46 (10): 1089-1096. doi:10.1038/ng.3075. http://www.nature.com


Evans, L. M., G. J. Allan, N. Meneses, T. L. Max, and T. G. Whitham. 2013. "Herbivore Host-Associated

Genetic Differentiation Depends on the Scale of Plant Genetic Variation Examined." Evolutionary Ecology

27 (1): 65-81. doi:10.1007/s10682-012-9582-2. www.scopus.com (accessed June 15, 2016).

Evans, L. M., G. J. Allan, and T. G. Whitham. 2012. "Populus Hybrid Hosts Drive Divergence in the

Herbivorous Mite, Aceria Parapopuli: Implications for Conservation of Plant Hybrid Zones as Essential

Habitat." Conservation Genetics 13 (6): 1601-1609. doi:10.1007/s10592-012-0409-z.


Fan, Y., K. Rupert, A. C. Wiedenhoeft, K. Woeste, C. Lexer, and R. Meilan. 2013. "Figured Grain in Aspen

is Heritable and Not Affected by Graft-Transmissible Signals." Trees - Structure and Function 27 (4): 973-

983. doi:10.1007/s00468-013-0849-1. http://download.springer.com (accessed June 14, 2016).

Gailing, O. 2014. "Strategies to Identify Adaptive Genes in Hybridizing Trees Like Oaks and Poplars."

Notulae Botanicae Horti Agrobotanici Cluj-Napoca 42 (2): 299-309. doi:10.15835/nbha4229739.

http://search.proquest.com (accessed May 31, 2016).



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Gerttula, S., M. Zinkgraf, G. K. Muday, D. R. Lewis, F. M. Ibatullin, H. Brumer, F. Hart, S. D. Mansfield, V.

Filkov, and A. Groover. 2015. "Transcriptional and Hormonal Regulation of Gravitropism of Woody

Stems in Populus." Plant Cell 27 (10): 2800-2813. doi:10.1105/tpc.15.00531. http://www.plantcell.org


Guerra, F. P., J. L. Wegrzyn, R. Sykes, M. F. Davis, B. J. Stanton, and D. B. Neale. 2013. "Association

Genetics of Chemical Wood Properties in Black Poplar (Populus Nigra)." New Phytologist 197 (1): 162-

176. doi:10.1111/nph.12003. http://onlinelibrary.wiley.com (accessed June 15, 2016).

Guo, J., J. L. Morrell-Falvey, J. L. Labbé, W. Muchero, U. C. Kalluri, G. A. Tuskan, and J. -G Chen. 2012.

"Highly Efficient Isolation of Populus Mesophyll Protoplasts and its Application in Transient Expression

Assays." PLoS ONE 7 (9). doi:10.1371/journal.pone.0044908. http://journals.plos.org (accessed June 16,

2016).

Henry, I. M., M. S. Zinkgraf, A. T. Groover, and L. Comaia. 2015. "A System for Dosage-Based Functional

Genomics in Poplar." Plant Cell 27 (9): 2370-2383. doi:10.1105/tpc.15.00349. http://www.plantcell.org


Hersch-Green, E. I., G. J. Allan, and T. G. Whitham. 2014. "Genetic Analysis of Admixture and Patterns of

Introgression in Foundation Cottonwood Trees (Salicaceae) in Southwestern Colorado, USA." Tree

Genetics and Genomes 10 (3): 527-539. doi:10.1007/s11295-014-0701-9. http://download.springer.com


Holeski, L. M., M. L. Hillstrom, T. G. Whitham, and R. L. Lindroth. 2012. "Relative Importance of Genetic,

Ontogenetic, Induction, and Seasonal Variation in Producing a Multivariate Defense Phenotype in a

Foundation Tree Species." Oecologia 170 (3): 695-707. doi:10.1007/s00442-012-2344-6.


Howe, G. T., D. P. Horvath, P. Dharmawardhana, H. D. Priest, T. C. Mockler, and S. H. Strauss. 2015.

"Extensive Transcriptome Changes during Natural Onset and Release of Vegetative Bud Dormancy in

Populus." Frontiers in Plant Science 6 (DEC). doi:10.3389/fpls.2015.00989. http://www.ncbi.nlm.nih.gov


Hsu, C. -Y, J. P. Adams, K. No, H. Liang, R. Meilan, O. Pechanova, A. Barakat, J. E. Carlson, G. P. Page, and

C. Yuceer. 2012. "Overexpression of Constans Homologs CO1 and CO2 Fails to Alter Normal

Reproductive Onset and Fall Bud Set in Woody Perennial Poplar." PLoS ONE 7 (9).


Huang, D. and W. Dai. 2015. "Molecular Characterization of the Basic Helix-Loop-Helix (bHLH) Genes

that are Differentially Expressed and Induced by Iron Deficiency in Populus." Plant Cell Reports 34 (7):

1211-1224. doi:10.1007/s00299-015-1779-8. http://link.springer.com (accessed May 26, 2016).

Induri, B. R., D. R. Ellis, G. T. Slavov, T. Yin, X. Zhang, W. Muchero, G. A. Tuskan, and S. P. Difazio. 2012.

"Identification of Quantitative Trait Loci and Candidate Genes for Cadmium Tolerance in Populus." Tree

Physiology 32 (5): 626-638. http://treephys.oxfordjournals.org (accessed May 17, 2016).

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Islam, N., G. Li, W. M. Garrett, R. Lin, G. Sriram, B. Cooper, and G. D. Coleman. 2015. "Proteomics of

Nitrogen Remobilization in Poplar Bark." Journal of Proteome Research 14 (2): 1112-1126.

doi:10.1021/pr501090p. http://pubs.acs.org (accessed May 31, 2016).

Jervis, J., S. B. Hildreth, X. Sheng, E. P. Beers, A. M. Brunner, and R. F. Helm. 2015. "A Metabolomic

Assessment of NAC154 Transcription Factor Overexpression in Field Grown Poplar Stem Wood."

Phytochemistry 115 (1): 112-120. doi:10.1016/j.phytochem.2015.02.013. http://www.sciencedirect.com


Karve, A. A., S. S. Jawdy, L. E. Gunter, S. M. Allen, X. Yang, G. A. Tuskan, S. D. Wullschleger, and D. J.

Weston. 2012. "Initial Characterization of Shade Avoidance Response Suggests Functional Diversity

between Populus Phytochrome B Genes." New Phytologist 196 (3): 726-737. doi:10.1111/j.1469-


Keller, S. R., N. Levsen, M. S. Olson, and P. Tiffin. 2012. "Local Adaptation in the Flowering-Time Gene

Network of Balsam Poplar, Populus Balsamifera L." Molecular Biology and Evolution 29 (10): 3143-3152.

doi:10.1093/molbev/mss121. http://mbe.oxfordjournals.org (accessed June 16, 2016).

Lawson, S. S. and C. H. Michler. 2014. "Overexpression of AtSTO1 Leads to Improved Salt Tolerance in

Populus tremula × P. Alba." Transgenic Research 23 (5): 817-826. doi:10.1007/s11248-014-9808-x.


Lawson, S. S., P. M. Pijut, and C. H. Michler. 2014. "The Cloning and Characterization of a Poplar

Stomatal Density Gene." Genes and Genomics 36 (4): 427-441. doi:10.1007/s13258-014-0177-x.

www.scopus.com. (accessed June 7, 2016).

Lee, C., R. Zhong, and Z. -H Ye. 2012. "Biochemical Characterization of Xylan Xylosyltransferases Involved

in Wood Formation in Poplar." Plant Signaling and Behavior 7 (3). http://www.tandfonline.com


Levsen, N. D., P. Tiffin, and M. S. Olson. 2012. "Pleistocene Speciation in the Genus Populus

(Salicaceae)." Systematic Biology 61 (3): 401-412. http://sysbio.oxfordjournals.org (accessed May 17,

2016).

Li, X., C. Gunasekara, Y. Guo, H. Zhang, L. Lei, S. Tunlaya-Anukit, V. Busov, V. Chiang, and H. Wei. 2014.

"Pop's Pipes: Poplar Gene Expression Data Analysis Pipelines." Tree Genetics and Genomes 10 (4): 1093-

1101. doi:10.1007/s11295-014-0745-x. http://download.springer.com (accessed June 8, 2016).

Lin, W. -L, B. Cai, and Z. -M Cheng. 2014. "Identification and Characterization of Lineage-Specific Genes

in Populus Trichocarpa." Plant Cell, Tissue and Organ Culture 116 (2): 217-225. doi:10.1007/s11240-013-

0397-9. http://download.springer.com (accessed June 7, 2016).

Lin, W., E. Hagen, A. Fulcher, M. T. Hren, and Z. -M Cheng. 2013. "Overexpressing the ZmDof1 Gene in

Populus does Not Improve Growth and Nitrogen Assimilation Under Low-Nitrogen Conditions." Plant




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Cell, Tissue and Organ Culture 113 (1): 51-61. doi:10.1007/s11240-012-0250-6.


Lin, Y. -C, W. Li, Y. -H Sun, S. Kumari, H. Wei, Q. Li, S. Tunlaya-Anukit, R. R. Sederoff, and V. L. Chiang.

2013. "SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory

Network in Wood Formation in Populus Trichocarpa." Plant Cell 25 (11): 4324-4341.

doi:10.1105/tpc.113.117697. http://www.plantcell.org (accessed June 13, 2016).

Lindtke, D., Z. Gompert, C. Lexer, and C. A. Buerkle. 2014. "Unexpected Ancestry of Populus Seedlings

from a Hybrid Zone Implies a Large Role for Postzygotic Selection in the Maintenance of Species."

Molecular Ecology 23 (17): 4316-4330. doi:10.1111/mec.12759. http://onlinelibrary.wiley.com (accessed

June 8, 2016).

Liu, L., T. Ramsay, M. Zinkgraf, D. Sundell, N. R. Street, V. Filkov, and A. Groover. 2015. "A Resource for

Characterizing Genome-Wide Binding and Putative Target Genes of Transcription Factors Expressed

during Secondary Growth and Wood Formation in Populus." Plant Journal 82 (5): 887-898.

doi:10.1111/tpj.12850. http://onlinelibrary.wiley.com (accessed May 31, 2016).

Liu, L., M. Zinkgraf, H. E. Petzold, E. P. Beers, V. Filkov, and A. Groover. 2015. "The Populus ARBORKNOX1

Homeodomain Transcription Factor Regulates Woody Growth through Binding to Evolutionarily

Conserved Target Genes of Diverse Function." New Phytologist 205 (2): 682-694.

doi:10.1111/nph.13151. http://onlinelibrary.wiley.com (accessed May 31, 2016).

Liu, L., V. Filkov, and A. Groover. 2014. "Modeling Transcriptional Networks Regulating Secondary

Growth and Wood Formation in Forest Trees." Physiologia Plantarum 151 (2): 156-163.

doi:10.1111/ppl.12113. http://onlinelibrary.wiley.com (accessed June 9, 2016).

Liu, Y., F. Xu, J. Gou, J. Al-Haddad, F. W. Telewski, H. -J Bae, and C. P. Joshi. 2012. "Importance of Two

Consecutive Methionines at the N-Terminus of a Cellulose Synthase (PtdCesA8A) for Normal Wood

Cellulose Synthesis in Aspen." Tree Physiology 32 (11): 1403-1412. doi:10.1093/treephys/tps096.

https://treephys.oxfordjournals.org (accessed June 16, 2016).

Loziuk, P. L., J. Parker, W. Li, C. -Y Lin, J. P. Wang, Q. Li, R. R. Sederoff, V. L. Chiang, and D. C. Muddiman.

2015. "Elucidation of Xylem-Specific Transcription Factors and Absolute Quantification of Enzymes

Regulating Cellulose Biosynthesis in Populus Trichocarpa." Journal of Proteome Research 14 (10): 4158-

4168. doi:10.1021/acs.jproteome.5b00233. http://pubs.acs.org (accessed June 1, 2016).

Lu, H., V. Viswanath, C. Ma, E. Etherington, P. Dharmawardhana, O. Shevchenko, S. H. Strauss, D. W.

Pearce, S. B. Rood, and V. Busov. 2015. "Recombinant DNA Modification of Gibberellin Metabolism

Alters Growth Rate and Biomass Allocation in Populus." Tree Genetics and Genomes 11 (6): 1-16.

doi:10.1007/s11295-015-0952-0. http://download.springer.com (accessed May 24, 2016).

Menon, M., W. J. Barnes, and M. S. Olson. 2015. "Population Genetics of Freeze Tolerance among

Natural Populations of Populus Balsamifera Across the Growing Season." New Phytologist 207 (3): 710-

722. doi:10.1111/nph.13381. http://onlinelibrary.wiley.com (accessed May 31, 2016).







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Mock, K. E., B. A. Richardson, and P. G. Wolf. 2013. "Molecular Tools and Aspen Management: A Primer

and Prospectus." Forest Ecology and Management 299: 6-13. doi:10.1016/j.foreco.2012.11.004.

http://www.sciencedirect.com (accessed June 14, 2016).

Mock, K. E., C. M. Callahan, M. N. Islam-Faridi, J. D. Shaw, H. S. Rai, S. C. Sanderson, C. A. Rowe, et al.

2012. "Widespread Triploidy in Western North American Aspen (Populus Tremuloides)." PLoS ONE 7

(10). doi:10.1371/journal.pone.0048406. http://journals.plos.org (accessed June 16, 2016).

Molina-Rueda, J. J., C. J. Tsai, and E. G. Kirby. 2013. "The Populus Superoxide Dismutase Gene Family and

its Responses to Drought Stress in Transgenic Poplar Overexpressing a Pine Cytosolic Glutamine

Synthetase (GS1a)." PLoS ONE 8 (2). doi:10.1371/journal.pone.0056421. http://journals.plos.org


Muchero, W., J. Guo, S. P. DiFazio, J. -G Chen, P. Ranjan, G. T. Slavov, L. E. Gunter, et al. 2015. "High-

Resolution Genetic Mapping of Allelic Variants Associated with Cell Wall Chemistry in Populus." BMC

Genomics 16 (1). doi:10.1186/s12864-015-1215-z. http://bmcgenomics.biomedcentral.com (accessed

May 31, 2016).

Muchero, W., M. M. Sewell, P. Ranjan, L. E. Gunter, T. J. Tschaplinski, T. Yin, and G. A. Tuskan. 2013.

"Genome Anchored QTLs for Biomass Productivity in Hybrid Populus Grown Under Contrasting

Environments." PLoS ONE 8 (1). doi:10.1371/journal.pone.0054468. http://journals.plos.org (accessed

June 15, 2016).

Nag, A., T. V. Karpinets, C. H. Chang, and M. Bar-Peled. 2012. "Enhancing a Pathway-Genome Database

(PGDB) to Capture Subcellular Localization of Metabolites and Enzymes: The Nucleotide-Sugar

Biosynthetic Pathways of Populus Trichocarpa." Database 2012. doi:10.1093/database/bas013.

http://database.oxfordjournals.org (accessed June 17, 2016).

Page, A. F., R. Minocha, and S. C. Minocha. 2012. "Living with High Putrescine: Expression of Ornithine

and Arginine Biosynthetic Pathway Genes in High and Low Putrescine Producing Poplar Cells." Amino

Acids 42 (1): 295-308. doi:10.1007/s00726-010-0807-9. http://download.springer.com (accessed June

17, 2016).

Pettengill, E. A., J. B. Pettengill, and G. D. Coleman. 2013. "Elucidating the Evolutionary History and

Expression Patterns of Nucleoside Phosphorylase Paralogs (Vegetative Storage Proteins) in Populus and

the Plant Kingdom." BMC Plant Biology 13 (1). doi:10.1186/1471-2229-13-118.


Pettengill, E. A., C. Parmentier-Line, and G. D. Coleman. 2012. "Evaluation of qPCR Reference Genes in

Two Genotypes of Populus for use in Photoperiod and Low-Temperature Studies." BMC Research Notes

5. doi:10.1186/1756-0500-5-366. http://download.springer.com (accessed June 16, 2016).

Potkar, R., J. Recla, and V. Busov. 2013. "Ptr-MIR169 is a Posttranscriptional Repressor of PtrHAP2 during

Vegetative Bud Dormancy Period of Aspen (Populus Tremuloides) Trees." Biochemical and Biophysical




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Research Communications 431 (3): 512-518. doi:10.1016/j.bbrc.2013.01.027.


Puzey, J. R., A. Karger, M. Axtell, and E. M. Kramer. 2012. "Deep Annotation of Populus Trichocarpa

Micrornas from Diverse Tissue Sets." PLoS ONE 7 (3). http://journals.plos.org (accessed May 17, 2016).

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2013. "Transcriptome Characterization and Detection of Gene Expression Differences in Aspen (Populus

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Busby, P. E., G. Newcombe, R. Dirzo, and T. G. Whitham. 2014. "Differentiating Genetic and

Environmental Drivers of Plant-Pathogen Community Interactions." Journal of Ecology 102 (5): 1300-

1309. doi:10.1111/1365-2745.12270. http://onlinelibrary.wiley.com (accessed June 9, 2016).

Busby, P. E., G. Newcombe, R. Dirzo, and T. G. Whitham. 2013. "Genetic Basis of Pathogen Community

Structure for Foundation Tree Species in a Common Garden and in the Wild." Journal of Ecology 101 (4):

867-877. doi:10.1111/1365-2745.12112. http://onlinelibrary.wiley.com (accessed June 14, 2016).

Busby, P. E., N. Zimmerman, D. J. Weston, S. S. Jawdy, J. Houbraken, and G. Newcombe. 2013. "Leaf

Endophytes and Populus Genotype Affect Severity of Damage from the Necrotrophic Leaf Pathogen,

Drepanopeziza Populi." Ecosphere 4 (10). doi:10.1890/ES13-00127.1. http://onlinelibrary.wiley.com





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Busby, P. E., M. Catherine Aime, and G. Newcombe. 2012. "Foliar Pathogens of Populus Angustifolia are

Consistent with a Hypothesis of Beringian Migration into North America." Fungal Biology 116 (7): 792-

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Gaskell, J., A. Marty, M. Mozuch, P. J. Kersten, S. S. BonDurant, G. Sabat, A. Azarpira, et al. 2014.

"Influence of Populus Genotype on Gene Expression by the Wood Decay Fungus Phanerochaete

Chrysosporium." Applied and Environmental Microbiology 80 (18): 5828-5835. doi:10.1128/AEM.01604-

14. http://aem.asm.org (accessed June 8, 2016).

Goodrich, B. A. and W. R. Jacobi. 2012. "Foliar Damage, Ion Content, and Mortality Rate of Five Common

Roadside Tree Species Treated with Soil Applications of Magnesium Chloride." Water, Air, and Soil

Pollution 223 (2): 847-862. http://download.springer.com (accessed May 24, 2016).

Hanna, P. and D. Kulakowski. 2012. "The Influences of Climate on Aspen Dieback." Forest Ecology and

Management 274: 91-98. http://www.sciencedirect.com (accessed May 24, 2016).

Jiang, H., X. Wang, C. Xiao, W. Wang, X. Zhao, J. Sui, R. Sa, T. L. Guo, and X. Liu. 2015. "Antifungal Activity

of Brevibacillus Laterosporus JX-5 and Characterization of its Antifungal Components." World Journal of

Microbiology and Biotechnology 31 (10): 1605-1618. doi:10.1007/s11274-015-1912-4.


LeBoldus, J. M., N. Isabel, K. D. Floate, P. Blenis, and B. R. Thomas. 2013. "Testing the 'Hybrid

Susceptibility' and 'Phenological Sink' Hypotheses using the P. Balsamifera - P. Deltoides Hybrid Zone

and Septoria Leaf Spot [Septoria Musiva]." PLoS ONE 8 (12). doi:10.1371/journal.pone.0084437.


Liang, H., M. Staton, Y. Xu, T. Xu, and J. Leboldus. 2014. "Comparative Expression Analysis of Resistant

and Susceptible Populus Clones Inoculated with Septoria Musiva." Plant Science 223: 69-78.

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Qin, R. and J. M. LeBoldus. 2014. "The Infection Biology of Sphaerulina Musiva: Clues to Understanding a

Forest Pathogen." PLoS ONE 9 (7). doi:10.1371/journal.pone.0103477. http://journals.plos.org (accessed

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Qin, R., G. R. Stanosz, and J. M. LeBoldus. 2014. "A Nonwounding Greenhouse Screening Protocol for

Prediction of Field Resistance of Hybrid Poplar to Septoria Canker." Plant Disease 98 (8): 1106-1111.

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Raghavendra, A. K. H. and G. Newcombe. 2013. "The Contribution of Foliar Endophytes to Quantitative

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Worrall, J. J., A. G. Keck, and S. B. Marchetti. 2015. "Populus Tremuloides Stands Continue to Deteriorate

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Worrall, J. J., G. E. Rehfeldt, A. Hamann, E. H. Hogg, S. B. Marchetti, M. Michaelian, and L. K. Gray. 2013.

"Recent Declines of Populus Tremuloides in North America Linked to Climate." Forest Ecology and

Management 299: 35-51. doi:10.1016/j.foreco.2012.12.033. http://www.sciencedirect.com (accessed

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Phytoremediation and Endophytes

Abichou, T., J. Musagasa, L. Yuan, J. Chanton, K. Tawfiq, D. Rockwood, and L. Licht. 2012. "Field

Performance of Alternative Landfill Covers Vegetated with Cottonwood and Eucalyptus Trees."

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Aryal, N. and D. M. Reinhold. 2015. "Reduction of Metal Leaching by Poplars during Soil Treatment of

Wastewaters: Small-Scale Proof of Concept Studies." Ecological Engineering 78: 53-61.

doi:10.1016/j.ecoleng.2014.05.020. http://www.sciencedirect.com (accessed May 27, 2016).

Ausland, H., A. Ward, L. Licht, and C. Just. 2015. "Enhanced Vadose Zone Nitrogen Removal by Poplar

during Dormancy." International Journal of Phytoremediation 17 (8): 729-736.

doi:10.1080/15226514.2014.987371. http://www.tandfonline.com (accessed May 31, 2016).

Bircher, S., M. L. Card, G. Zhai, Y. -P Chin, and J. L. Schnoor. 2015. "Sorption, Uptake, and

Biotransformation of 17β-Estradiol, 17α-Ethinylestradiol, Zeranol, and Trenbolone Acetate by Hybrid

Poplar." Environmental Toxicology and Chemistry 34 (12): 2906-2913. doi:10.1002/etc.3166.


Bradley, A., R. A. Larson, and T. Runge. 2015. "Effect of Wood Biochar in Manure-Applied Sand Columns

on Leachate Quality." Journal of Environmental Quality 44 (6): 1720-1728. doi:10.2134/jeq2015.04.0196.

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Brown, S. D., D. M. Klingeman, T. S. Lu, C. M. Johnson, S. M. Utturkar, M. L. Land, C. W. Schadt, M. J.

Doktycz, and D. A. Pelletier. 2012. "Draft Genome Sequence of Rhizobium Sp. Strain PDO1-076, a

Bacterium Isolated from Populus Deltoides." Journal of Bacteriology 194 (9): 2383-2384.

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Brown, S. D., S. M. Utturkar, D. M. Klingeman, C. M. Johnson, S. L. Martin, M. L. Land, T. S. Lu, C. W.

Schadt, M. J. Doktycz, and D. A. Pelletiera. 2012. "Twenty-One Genome Sequences from Pseudomonas

Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and

Endosphere of Populus Deltoides." Journal of Bacteriology 194 (21): 5991-5993. doi:10.1128/JB.01243-

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Desai, S., D. Naik, and J. R. Cumming. 2014. "The Influence of Phosphorus Availability and Laccaria

Bicolor Symbiosis on Phosphate Acquisition, Antioxidant Enzyme Activity, and Rhizospheric Carbon Flux

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Dipesh, K. C., R. E. Will, T. C. Hennessey, and C. J. Penn. 2014. "Evaluating Performance of Short-Rotation

Woody Crops for Bioremediation Purposes." New Forests 46 (2): 267-281. doi:10.1007/s11056-014-


Doty, S. L. 2015. "Improving Crop Growth, Biomass Production and Phytoremediation using Endophytes

of Poplar." Australasian Biotechnology 25 (2): 46. http://search.informit.com (accessed May 31, 2016).

Ferro, A. M., T. Adham, B. Berra, and D. Tsao. 2013. "Performance of Deep-Rooted Phreatophytic Trees

at a Site Containing Total Petroleum Hydrocarbons." International Journal of Phytoremediation 15 (3):

232-244. doi:10.1080/15226514.2012.687195. http://www.tandfonline.com (accessed June 15, 2016).

Gehring, C. A., B. Ji, S. Fong, and T. G. Whitham. 2014. "Hybridization in Populus Alters the Species

Composition and Interactions of Root-Colonizing Fungi: Consequences for Host Plant performance1."

Botany 92 (4): 287-293. doi:10.1139/cjb-2013-0174. http://www.nrcresearchpress.com (accessed June

8, 2016).

Grubisha, L. C., N. Levsen, M. S. Olson, and D. Lee Taylor. 2012. "Intercontinental Divergence in the

Populus-Associated Ectomycorrhizal Fungus, Tricholoma Populinum." New Phytologist 194 (2): 548-560.


Kang, J. W. and S. L. Doty. 2014. "Cometabolic Degradation of Trichloroethylene by Burkholderia Cepacia

G4 with Poplar Leaf Homogenate." Canadian Journal of Microbiology 60 (7): 487-490. doi:10.1139/cjm-

2014-0095. http://www.nrcresearchpress.com (accessed June 7, 2016).

Kang, J. W., Z. Khan, and S. L. Doty. 2012. "Biodegradation of Trichloroethylene by an Endophyte of

Hybrid Poplar." Applied and Environmental Microbiology 78 (9): 3504-3507. doi:10.1128/AEM.06852-11.

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Kelly, J. M. and J. L. Kovar. 2012. "Modeling Phosphorus Capture by Plants Growing in a Multispecies

Riparian Buffer." Applied and Environmental Soil Science 2012. doi:10.1155/2012/838254.

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Labbé, J. L., D. J. Weston, N. Dunkirk, D. A. Pelletier, and G. A. Tuskan. 2014. "Newly Identified Helper

Bacteria Stimulate Ectomycorrhizal Formation in Populus." Frontiers in Plant Science 5 (OCT).

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Lawson, S. P., N. Christian, and P. Abbot. 2014. "Comparative Analysis of the Biodiversity of Fungal

Endophytes in Insect-Induced Galls and Surrounding Foliar Tissue." Fungal Diversity 66 (1): 89-97.

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Lee, K. Y., S. E. Strand, and S. L. Doty. 2012. "Phytoremediation of Chlorpyrifos by Populus and Salix."

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Limmer, M. A., G. D. Martin, C. J. Watson, C. Martinez, and J. G. Burken. 2014. "Phytoscreening: A

Comparison of in Planta Portable Gc-Ms and in Vitro Analyses." Groundwater Monitoring and

Remediation 34 (1): 49-56. doi:10.1111/gwmr.12039. http://onlinelibrary.wiley.com (accessed June 6,

2016).

Mason, C. J., J. A. Pfammatter, L. M. Holeski, and K. F. Raffa. 2014. "Foliar Bacterial Communities of

Trembling Aspen in a Common Garden." Canadian Journal of Microbiology 61 (2): 143-149.

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Meggo, R. E. and J. L. Schnoor. 2013. "Rhizospere Redox Cycling and Implications for Rhizosphere

Biotransformation of Selected Polychlorinated Biphenyl (PCB) Congeners." Ecological Engineering 57:

285-292. doi:10.1016/j.ecoleng.2013.04.052. http://www.sciencedirect.com (accessed June 14, 2016).

Meggo, R. E., J. L. Schnoor, and D. Hu. 2013. "Dechlorination of PCBs in the Rhizosphere of Switchgrass

and Poplar." Environmental Pollution 178: 312-321. doi:10.1016/j.envpol.2013.02.035.


Meinhardt, K. A. and C. A. Gehring. 2012. "Disrupting Mycorrhizal Mutualisms: A Potential Mechanism

by which Exotic Tamarisk Outcompetes Native Cottonwoods." Ecological Applications 22 (2): 532-549.


Minogue, P. J., M. Miwa, D. L. Rockwood, and C. L. Mackowiak. 2012. "Removal of Nitrogen and

Phosphorus by Eucalyptus and Populus at a Tertiary Treated Municipal Wastewater Sprayfield."

International Journal of Phytoremediation 14 (10): 1010-1023. doi:10.1080/15226514.2011.649435.


Odom, L., J. Burken, and L. Newman. 2013. "Distribution and Accumulation of Trichloroethylene and

Trichloroacetic Acid in Hybrid Poplars." Journal of Environmental Engineering (United States) 139 (9):

1162-1167. doi:10.1061/(ASCE)EE.1943-7870.0000703. www.scopus.com (accessed June 14, 2016).

Potvin, L. R., D. L. Richter, M. F. Jurgensen, and R. K. Dumroese. 2012. "Association of Pinus Banksiana

Lamb. and Populus Tremuloides Michx. Seedling Fine Roots with Sistotrema Brinkmannii (Bres.) J. Erikss.

(Basidiomycotina)." Mycorrhiza 22 (8): 631-638. doi:10.1007/s00572-012-0440-4.


Nichols, E. G., R. L. Cook, J. E. Landmeyer, B. Atkinson, D. R. Malone, G. Shaw, and L. Woods. 2014.

"Phytoremediation of a Petroleum-Hydrocarbon Contaminated Shallow Aquifer in Elizabeth City, North

Carolina, USA." Remediation 24 (2): 29-46. doi:10.1002/rem.21382. http://onlinelibrary.wiley.com


Renninger, H. J., S. Wadhwa, F. J. Gallagher, D. Vanderklein, and K. V. R. Schäfer. 2013. "Allometry and

Photosynthetic Capacity of Poplar (Populus Deltoides) Along a Metal Contamination Gradient in an

Urban Brownfield." Urban Ecosystems 16 (2): 247-263. doi:10.1007/s11252-012-0259-y.












Rogers, A., K. McDonald, M. F. Muehlbauer, A. Hoffman, K. Koenig, L. Newman, S. Taghavi, and D. Van

Der Lelie. 2012. "Inoculation of Hybrid Poplar with the Endophytic Bacterium Enterobacter Sp. 638

Increases Biomass but does Not Impact Leaf Level Physiology." GCB Bioenergy 4 (3): 364-370.

doi:10.1111/j.1757-1707.2011.01119.x. http://onlinelibrary.wiley.com (accessed June 17, 2016).

Schaefer, A. L., C. R. Lappala, R. P. Morlen, D. A. Pelletier, T. -Y S. Lu, P. K. Lankford, C. S. Harwood, and E.

P. Greenberg. 2013. "LuxR- and luxI-Type Quorum-Sensing Circuits are Prevalent in Members of the

Populus Deltoides Microbiome." Applied and Environmental Microbiology 79 (18): 5745-5752.

doi:10.1128/AEM.01417-13. http://aem.asm.org (accessed June 14, 2016).

Schnabel, W., J. Munk, and A. Byrd. 2015. "Field Note: Comparative Efficacy of A Woody

Evapotranspiration Landfill Cover Following the Removal of Aboveground Biomass." International

Journal of Phytoremediation 17 (2): 159-164. doi:10.1080/15226514.2013.862210.

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Shakya, M., N. Gottel, H. Castro, Z. K. Yang, L. Gunter, J. Labbé, W. Muchero, et al. 2013. "A Multifactor

Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus

Deltoides Trees." PLoS ONE 8 (10). doi:10.1371/journal.pone.0076382. http://journals.plos.org


Shifflett, S. D., D. W. Hazel, D. J. Frederick, and E. G. Nichols. 2014. "Species Trials of Short Rotation

Woody Crops on Two Wastewater Application Sites in North Carolina, USA." Bioenergy Research 7 (1):


Smesrud, J. K., G. D. Duvendack, J. M. Obereiner, J. L. Jordahl, and M. F. Madison. 2012. "Practical

Salinity Management for Leachate Irrigation to Poplar Trees." International Journal of Phytoremediation

14 (SUPPL.): 26-46. doi:10.1080/15226514.2011.607868. http://www.tandfonline.com (accessed June

17, 2016).

Timm, C. M., A. G. Campbell, S. M. Utturkar, S. -R Jun, R. E. Parales, W. A. Tan, M. S. Robeson, et al. 2015.

"Metabolic Functions of Pseudomonas Fluorescens Strains from Populus Deltoides Depend on

Rhizosphere Or Endosphere Isolation Compartment." Frontiers in Microbiology 6 (OCT).

doi:10.3389/fmicb.2015.01118. http://www.ncbi.nlm.nih.gov (accessed June 1, 2016).

Tschaplinski, T. J., J. M. Plett, N. L. Engle, A. Deveau, K. C. Cushman, M. Z. Martin, M. J. Doktycz, et al.

2014. "Populus Trichocarpa and Populus Deltoids Exhibit Different Metabolomic Responses to

Colonization by the Symbiotic Fungus Laccaria Bicolor." Molecular Plant-Microbe Interactions 27 (6):

546-556. doi:10.1094/MPMI-09-13-0286-R. http://apsjournals.apsnet.org (accessed June 8, 2016).

Wang, J., Y. Yang, H. Zhu, J. Braam, J. L. Schnoor, and P. J. J. Alvarez. 2014. "Uptake, Translocation, and

Transformation of Quantum Dots with Cationic Versus Anionic Coatings by Populus Deltoides × Nigra

Cuttings." Environmental Science and Technology 48 (12): 6754-6762. doi:10.1021/es501425r.

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Wang, J., Y. Koo, A. Alexander, Y. Yang, S. Westerhof, Q. Zhang, J. L. Schnoor, V. L. Colvin, J. Braam, and

P. J. J. Alvarez. 2013. "Phytostimulation of Poplars and Arabidopsis Exposed to Silver Nanoparticles and

Ag+ at Sublethal Concentrations." Environmental Science and Technology 47 (10): 5442-5449.

doi:10.1021/es4004334. http://pubs.acs.org (accessed June 15, 2016).

Wilson, J., R. Bartz, M. Limmer, and J. Burken. 2013. "Plants as Bio-Indicators of Subsurface Conditions:

Impact of Groundwater Level on BTEX Concentrations in Trees." International Journal of

Phytoremediation 15 (3): 257-267. doi:10.1080/15226514.2012.694499. http://www.tandfonline.com


Zhai, G., S. M. Gutowski, H. -J Lehmler, and J. L. Schnoor. 2014. "Enantioselective Transport and

Biotransformation of Chiral Hydroxylated Metabolites of Polychlorinated Biphenyls in Whole Poplar

Plants." Environmental Science and Technology 48 (20): 12213-12220. doi:10.1021/es503443e.


Zhai, G., K. S. Walters, D. W. Peate, P. J. J. Alvarez, and J. L. Schnoor. 2014. "Transport of Gold

Nanoparticles through Plasmodesmata and Precipitation of Gold Ions in Woody Poplar." Environmental

Science and Technology Letters 1 (2): 146-151. doi:10.1021/ez400202b. http://pubs.acs.org (accessed

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Zhai, G., H. -J Lehmler, and J. L. Schnoor. 2013. "Inhibition of Cytochromes P450 and the Hydroxylation

of 4-Monochlorobiphenyl in Whole Poplar." Environmental Science and Technology 47 (13): 6829-6835.

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Zhai, G., H. -J Lehmler, and J. L. Schnoor. 2013. "Sulfate Metabolites of 4-Monochlorobiphenyl in Whole

Poplar Plants." Environmental Science and Technology 47 (1): 557-562. doi:10.1021/es303807f.


Management Operations

Andersen, D. C., E. C. Adair, S. M. Nelson, and D. Binkley. 2014. "Can Nitrogen Fertilization Aid

Restoration of Mature Tree Productivity in Degraded Dryland Riverine Ecosystems?" Restoration Ecology

22 (5): 582-589. doi:10.1111/rec.12104. http://onlinelibrary.wiley.com (accessed June 9, 2016).

Aubrey, D. P., D. R. Coyle, and M. D. Coleman. 2012. "Functional Groups show Distinct Differences in

Nitrogen Cycling during Early Stand Development: Implications for Forest Management." Plant and Soil

351 (1-2): 219-236. http://link.springer.com (accessed May 24, 2016).

Barnett, J. and G. Murphy. 2012. "Accuracy of Automated Assessment of Sweep in Standing Hybrid

Poplar Trees using Terrestrial Laser Scanning." Forest Products Journal 62 (7-8): 500-506.

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Endress, B. A., M. J. Wisdom, M. Vavra, C. G. Parks, B. L. Dick, B. J. Naylor, and J. M. Boyd. 2012. "Effects

of Ungulate Herbivory on Aspen, Cottonwood, and Willow Development Under Forest Fuels Treatment









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Regimes." Forest Ecology and Management 276: 33-40. http://www.sciencedirect.com (accessed May

24, 2016).

Fields-Johnson, C. W., J. A. Burger, D. M. Evans, and C. E. Zipper. 2014. "Ripping Improves Tree Survival

and Growth on Unused Reclaimed Mined Lands." Environmental Management 53 (6): 1059-1065.


Hall, J. E., M. M. Pollock, S. Hoh, C. Volk, J. Goldsmith, and C. E. Jordan. 2015. "Evaluation of Dryland

Riparian Restoration with Cottonwood and Willow using Deep-Planting and Herbivore Protection."

Ecosphere 6 (12). doi:10.1890/ES15-00296.1. http://onlinelibrary.wiley.com (accessed May 25, 2016).

Headlee, W. L. and R. B. Hall. 2015. "Methods to Inventory and Strip Thin in Dense Stands of Aspen Root

Suckers." IForest 8 (OCTOBER2015): 590-595. doi:10.3832/ifor1461-008. http://www.sisef.it (accessed

May 27, 2016).

Headlee, W. L. and R. B. Hall. 2015. "Biomass Fly Ash as Foliar Fertilizer for Hybrid Aspen Trees: Nutrient

Uptake, Growth Response, and Compatibility with Nitrogen Fertilizer." Journal of Plant Nutrition 38 (4):

647-662. doi:10.1080/01904167.2014.936615. http://www.tandfonline.com (accessed May 31, 2016).

Headlee, W. L., C. E. Brewer, and R. B. Hall. 2014. "Biochar as a Substitute for Vermiculite in Potting Mix

for Hybrid Poplar." Bioenergy Research 7 (1): 120-131. doi:10.1007/s12155-013-9355-y.


Kabrick, J. M., D. C. Dey, J. W. Van Sambeek, M. V. Coggeshall, and D. F. Jacobs. 2012. "Quantifying

Flooding Effects on Hardwood Seedling Survival and Growth for Bottomland Restoration." New Forests

43: 695-710. http://download.springer.com (accessed May 24, 2016).

Kaczmarek, D. J., R. J. Rousseau, J. A. Wright, and B. C. Wachelka. 2014. "The Influence of Alternative

Plant Propagation and Stand Establishment Techniques on Survival and Growth of Eastern Cottonwood

(Populus Deltoides Bartr.) Clones." New Forests 45 (4): 487-506. doi:10.1007/s11056-014-9411-2.


Klockow, P. A., A. W. D'Amato, J. B. Bradford, and S. Fraver. 2014. "Nutrient Concentrations in Coarse

and Fine Woody Debris of Populus Tremuloides Michx.-Dominated Forests, Northern Minnesota, USA."

Silva Fennica 48 (1). doi:10.14214/sf.962. www.scopus.com. (accessed June 7, 2016).

Klockow, P. A., A. W. D'Amato, and J. B. Bradford. 2013. "Impacts of Post-Harvest Slash and Live-Tree

Retention on Biomass and Nutrient Stocks in Populus Tremuloides Michx.-Dominated Forests, Northern

Minnesota, USA." Forest Ecology and Management 291: 278-288. doi:10.1016/j.foreco.2012.11.001.


Kolka, R., A. Steber, K. Brooks, C. H. Perry, and M. Powers. 2012. "Relationships between Soil

Compaction and Harvest Season, Soil Texture, and Landscape Position for Aspen Forests." Northern

Journal of Applied Forestry 29 (1): 21-25. http://www.ingentaconnect.com (accessed May 24, 2016).




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Krasnow, K. D., A. S. Halford, and S. L. Stephens. 2012. "Aspen Restoration in the Eastern Sierra Nevada:

Effectiveness of Prescribed Fire and Conifer Removal." Fire Ecology 8 (3): 104-118.

doi:10.4996/fireecology.0803104. http://web.b.ebscohost.com (accessed June 16, 2016).

Kurth, V. J., J. B. Bradford, R. A. Slesak, and A. W. D'Amato. 2014. "Initial Soil Respiration Response to

Biomass Harvesting and Green-Tree Retention in Aspen-Dominated Forests of the Great Lakes Region."

Forest Ecology and Management 328: 342-352. doi:10.1016/j.foreco.2014.05.052.


Locher, A., H. Campa III, L. Leefers, and D. E. Beyer Jr. 2012. "Understanding Cumulative Effects of Aspen

Harvest on Wildlife Habitat and Timber Resources in Northern Michigan." Northern Journal of Applied

Forestry 29 (3): 113-127. doi:10.5849/njaf.11-018. www.scopus.com (accessed June 16, 2016).

Lynch, T. B., C. Budhathoki, and R. F. Wittwer. 2012. "Relationships between Height, Diameter, and

Crown for Eastern Cottonwood (Populus Deltoides) in a Great Plains Riparian Ecosystem." Western

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Forests in Western Colorado Favour Future Dominance by Quaking Aspen (Populus Tremuloides)."

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Lamit, L. J., M. K. Lau, C. M. Sthultz, S. C. Wooley, T. G. Whitham, and C. A. Gehring. 2014. "Tree

Genotype and Genetically Based Growth Traits Structure Twig Endophyte Communities." American

Journal of Botany 101 (3): 467-478. doi:10.3732/ajb.1400034. www.scopus.com. (accessed June 7,

2016).

Lehmer, E. M., J. Korb, S. Bombaci, N. McLean, J. Ghachu, L. Hart, A. Kelly, E. Jara-Molinar, C. O'Brien,

and K. Wright. 2012. "The Interplay of Plant and Animal Disease in a Changing Landscape: The Role of

Sudden Aspen Decline in Moderating Sin Nombre Virus Prevalence in Natural Deer Mouse Populations."

EcoHealth 9 (2): 205-216. doi:10.1007/s10393-012-0765-7. http://download.springer.com (accessed

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Leidolf, A. and R. J. Ryel. 2013. "Avian Response to Frost-Damaged Aspen in Northern Utah." Western

North American Naturalist 73 (1): 98-106. doi:10.3398/064.073.0110. http://www.bioone.org (accessed

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Lindroth, R. L. and S. B. St. Clair. 2013. "Adaptations of Quaking Aspen (Populus Tremuloides Michx.) for

Defense Against Herbivores." Forest Ecology and Management 299: 14-21.


Long, J. N. and K. Mock. 2012. "Changing Perspectives on Regeneration Ecology and Genetic Diversity in

Western Quaking Aspen: Implications for Silviculture." Canadian Journal of Forest Research 42 (12):

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Marks, C. O. and C. D. Canham. 2015. "A Quantitative Framework for Demographic Trends in Size-

Structured Populations: Analysis of Threats to Floodplain Forests." Ecosphere 6 (11). doi:10.1890/ES15-

00068.1. http://onlinelibrary.wiley.com (accessed May 26, 2016).

Mccolley, S. D., D. B. Tyers, and B. F. Sowell. 2012. "Aspen and Willow Restoration using Beaver on the

Northern Yellowstone Winter Range." Restoration Ecology 20 (4): 450-455. doi:10.1111/j.1526-

100X.2011.00792.x. http://onlinelibrary.wiley.com (accessed June 17, 2016).

McCullough, S. A., A. T. O'Geen, M. L. Whiting, D. A. Sarr, and K. W. Tate. 2013. "Quantifying the

Consequences of Conifer Succession in Aspen Stands: Decline in a Biodiversity-Supporting Community."

Environmental Monitoring and Assessment 185 (7): 5563-5576. doi:10.1007/s10661-012-2967-4.


McKenzie, D. A. and D. B. Tinker. 2012. "Fire-Induced Shifts in Overstory Tree Species Composition and

Associated Understory Plant Composition in Glacier National Park, Montana." Plant Ecology 213 (2):

207-224. http://link.springer.com (accessed May 24, 2016).

Mcshane, R. R., D. A. Auerbach, J. M. Friedman, G. T. Auble, P. B. Shafroth, M. F. Merigliano, M. L. Scott,

and N. L. Poff. 2015. "Distribution of Invasive and Native Riparian Woody Plants Across the Western USA

in Relation to Climate, River Flow, Floodplain Geometry and Patterns of Introduction." Ecography 38

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Meier, G. A., J. F. Brown, R. J. Evelsizer, and J. E. Vogelmann. 2015. "Phenology and Climate

Relationships in Aspen (Populus Tremuloides Michx.) Forest and Woodland Communities of

Southwestern Colorado." Ecological Indicators 48: 189-197. doi:10.1016/j.ecolind.2014.05.033.


Mittanck, C. M., P. C. Rogers, R. D. Ramsey, D. L. Bartos, and R. J. Ryel. 2014. "Exploring Succession

within Aspen Communities using a Habitat-Based Modeling Approach." Ecological Modelling 288: 203-

212. doi:10.1016/j.ecolmodel.2014.06.010. http://www.sciencedirect.com (accessed June 6, 2016).

Painter, L. E., R. L. Beschta, E. J. Larsen, and W. J. Ripple. 2015. "Recovering Aspen Follow Changing Elk

Dynamics in Yellowstone: Evidence of a Trophic Cascade?" Ecology 96 (1): 252-263.


Painter, L. E., R. L. Beschta, E. J. Larsen, and W. J. Ripple. 2014. "After Long-Term Decline, are Aspen

Recovering in Northern Yellowstone?" Forest Ecology and Management 329: 108-117.


Painter, L. E. and W. J. Ripple. 2012. "Effects of Bison on Willow and Cottonwood in Northern

Yellowstone National Park." Forest Ecology and Management 264: 150-158.


Pelz, K. A. and F. W. Smith. 2013. "How Will Aspen Respond to Mountain Pine Beetle? A Review of

Literature and Discussion of Knowledge Gaps." Forest Ecology and Management 299: 60-69.


Ripple, W. J. and R. L. Beschta. 2012. "Trophic Cascades in Yellowstone: The First 15Years After Wolf

Reintroduction." Biological Conservation 145 (1): 205-213. http://www.sciencedirect.com (accessed May

24, 2016).

Rogers, P. C., A. Jones, J. Catlin, J. Shuler, A. Morris, and M. Kuhns. 2015. "Quaking Aspen in the

Residential-Wildland Interface: Elk Herbivory Hinders Forest Conservation." Natural Areas Journal 35 (3):

416-427. doi:10.3375/043.035.0305. www.scopus.com (accessed June 2, 2016).

Rogers, P. C. and C. M. Mittanck. 2014. "Herbivory Strains Resilience in Drought-Prone Aspen

Landscapes of the Western United States." Journal of Vegetation Science 25 (2): 457-469.

doi:10.1111/jvs.12099. http://onlinelibrary.wiley.com (accessed June 7, 2016).

Rogers, P. C., C. Eisenberg, and S. B. St. Clair. 2013. "Resilience in Quaking Aspen: Recent Advances and

Future Needs." Forest Ecology and Management 299: 1-5. doi:10.1016/j.foreco.2012.11.008.


Scott, M. L., G. T. Auble, M. D. Dixon, W. Carter Johnson, and L. A. Rabbe. 2013. "Long-Term Cottonwood

Forest Dynamics Along the Upper Missouri River, USA." River Research and Applications 29 (8): 1016-

1029. doi:10.1002/rra.2588. http://onlinelibrary.wiley.com (accessed June 14, 2016).












Seager, S. T., C. Eisenberg, and S. B. St. Clair. 2013. "Patterns and Consequences of Ungulate Herbivory

on Aspen in Western North America." Forest Ecology and Management 299: 81-90.


Shinneman, D. J., W. L. Baker, P. C. Rogers, and D. Kulakowski. 2013. "Fire Regimes of Quaking Aspen in

the Mountain West." Forest Ecology and Management 299: 22-34. doi:10.1016/j.foreco.2012.11.032.


Smith, D. S., J. A. Schweitzer, P. Turk, J. K. Bailey, S. C. Hart, S. M. Shuster, and T. G. Whitham. 2012.

"Soil-Mediated Local Adaptation Alters Seedling Survival and Performance." Plant and Soil 352 (1-2):

243-251. http://link.springer.com (May 24, 2016).

St. Clair, S. B., X. Cavard, and Y. Bergeron. 2013. "The Role of Facilitation and Competition in the

Development and Resilience of Aspen Forests." Forest Ecology and Management 299: 91-99.


Strand, E. K., S. C. Bunting, and L. A. Vierling. 2012. "Landscape Composition in Aspen Woodlands Under

various Modeled Fire Regimes." USDA Forest Service - General Technical Report PNW-GTR (869): 197-

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Sites: An Experimental Test Along the Boise River, USA." Ecohydrology 8 (5): 825-837.

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Wan, H. Y., A. C. Olson, K. D. Muncey, and S. B. St. Clair. 2014. "Legacy Effects of Fire Size and Severity on

Forest Regeneration, Recruitment, and Wildlife Activity in Aspen Forests." Forest Ecology and

Management 329: 59-68. doi:10.1016/j.foreco.2014.06.006. http://www.sciencedirect.com (accessed

June 6, 2016).

Wilding, T. K., J. S. Sanderson, D. M. Merritt, S. B. Rood, and N. L. R. Poff. 2014. "Riparian Responses to

Reduced Flood Flows: Comparing and Contrasting Narrowleaf and Broadleaf Cottonwoods."

Hydrological Sciences Journal 59 (3-4): 605-617. doi:10.1080/02626667.2014.880786.


Winnie, J. A. 2012. "Predation Risk, Elk, and Aspen: Tests of a Behaviorally Mediated Trophic Cascade in

the Greater Yellowstone Ecosystem." Ecology 93 (12): 2600-2614. doi:10.1890/11-1990.1.


Woldeselassie, M., H. Van Miegroet, M. -C Gruselle, and N. Hambly. 2012. "Storage and Stability of Soil

Organic Carbon in Aspen and Conifer Forest Soils of Northern Utah." Soil Science Society of America

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Zegler, T. J., M. M. Moore, M. L. Fairweather, K. B. Ireland, and P. Z. Fulé. 2012. "Populus Tremuloides

Mortality Near the Southwestern Edge of its Range." Forest Ecology and Management 282: 196-207.


Willow Publications

Genetics and Molecular Biology

Carstens, B. C., R. S. Brennan, V. Chua, C. V. Duffie, M. G. Harvey, R. A. Koch, C. D. McMahan, et al. 2013.

"Model Selection as a Tool for Phylogeographic Inference: An Example from the Willow Salix

Melanopsis." Molecular Ecology 22 (15): 4014-4028. doi:10.1111/mec.12347.


Kuzovkina, Y. A. 2015. "Compilation of the Checklist for Cultivars of Salix L. (Willow)." HortScience 50

(11): 1608-1609. http://hortsci.ashspublications.org (accessed June 20, 2016).

Lim, G. S., M. R. Carvalho, S. M. Stuber, S. T. Gunner, and J. L. Reveal. 2013. "A Reconsideration of the

Typification of Rafinesque Generic Names Allied to Salix L." Rhodora 115 (962): 170-190.

doi:10.3119/12-11. www.scopus.com (accessed June 27, 2016).

Puckett, E. E., M. J. Serapiglia, A. M. DeLeon, S. Long, R. Minocha, and L. B. Smart. 2012. "Differential

Expression of Genes Encoding Phosphate Transporters Contributes to Arsenic Tolerance and

Accumulation in Shrub Willow (Salix Spp.)." Environmental and Experimental Botany 75: 248-257.

www.sciencedirect.com (accessed May 17, 2016).

Serapiglia, M. J., F. E. Gouker, J. F. Hart, F. Unda, S. D. Mansfield, A. J. Stipanovic, and L. B. Smart. 2015.

"Ploidy Level Affects Important Biomass Traits of Novel Shrub Willow (Salix) Hybrids." Bioenergy

Research 8 (1): 259-269. doi:10.1007/s12155-014-9521-x. http://download.springer.com (accessed June

20, 2016).

Serapiglia, M. J., F. E. Gouker, and L. B. Smart. 2014. "Early Selection of Novel Triploid Hybrids of Shrub

Willow with Improved Biomass Yield Relative to Diploids." BMC Plant Biology 14 (1). doi:10.1186/1471-


Serapiglia, M. J., K. D. Cameron, A. J. Stipanovic, and L. B. Smart. 2012. "Correlations of Expression of Cell

Wall Biosynthesis Genes with Variation in Biomass Composition in Shrub Willow (Salix Spp.) Biomass

Crops." Tree Genetics and Genomes 8 (4): 775-788. doi:10.1007/s11295-011-0462-7.




http://hortsci.ashspublications.org/






Tantry, M. A., S. Shah, M. Y. Dar, M. M. Mir, K. Ghazanfar, F. A. Sheikh, M. A. Khuroo, and S. Akbar. 2013.

"9,10-Seco-9,19-Cyclolanostane Triterpene from Salix Caprea L. (Goat Willow)." Natural Product

Research 27 (2): 171-175. doi:10.1080/14786419.2012.665912. http://www.tandfonline.com (accessed

June 27, 2016).

Twyford, A. D. 2014. "Testing Evolutionary Hypotheses for DNA Barcoding Failure in Willows." Molecular

Ecology 23 (19): 4674-4676. doi:10.1111/mec.12892. http://onlinelibrary.wiley.com (accessed June 23,

2016).

Physiology and Ecophysiology

Becklin, K. M., M. L. Pallo, and C. Galen. 2012. "Willows Indirectly Reduce Arbuscular Mycorrhizal Fungal

Colonization in Understorey Communities." Journal of Ecology 100 (2): 343-351. doi:10.1111/j.1365-


Castro-Morales, L. M., P. F. Quintana-Ascencio, J. E. Fauth, K. J. Ponzio, and D. L. Hall. 2014.

"Environmental Factors Affecting Germination and Seedling Survival of Carolina Willow (Salix

Caroliniana)." Wetlands 34 (3): 469-478. doi:10.1007/s13157-014-0513-6. http://download.springer.com


Evans, T. L., R. Mata-González, D. W. Martin, T. Mclendon, and J. S. Noller. 2013. "Growth, Water

Productivity, and Biomass Allocation of Great Basin Plants as Affected by Summer Watering."

Ecohydrology 6 (5): 713-721. doi:10.1002/eco.1292. http://onlinelibrary.wiley.com (accessed June 23,

2016).

Hochwender, C. G., D. H. Cha, M. E. Czesak, R. S. Fritz, R. R. Smyth, A. D. Kaufman, B. Warren, and A.

Neuman. 2012. "Protein Storage and Root: Shoot Reallocation Provide Tolerance to Damage in a Hybrid

Willow System." Oecologia 169: 49-60. http://link.springer.com (accessed May 17, 2016).

Jenderek, M. M., B. Ambruzs, J. Tanner, G. Holman, C. Ledbetter, J. Postman, D. Ellis, and C. Leslie. 2014.

Extending the Dormant Bud Cryopreservation Method to New Tree Species. Acta Horticulturae. Vol.

1039. www.scopus.com (accessed June 23, 2016).

Lavin, S. R., K. E. Sullivan, S. C. Wooley, R. Robinson, S. Singh, K. Stone, S. Russell, and E. V. Valdes. 2015.

"Nutrient and Plant Secondary Compound Composition and Iron-Binding Capacity in Leaves and Green

Stems of Commonly used Plant Browse (Carolina Willow; Salix Caroliniana) Fed to Zoo-Managed

Browsing Herbivores." Zoo Biology 34 (6): 565-575. doi:10.1002/zoo.21244.


Lavin, S. R., K. E. Sullivan, S. C. Wooley, K. Stone, S. Russell, and E. V. Valdes. 2015. "Near Infrared

Reflectance Spectroscopy (NIRS) Analyses of Nutrient Composition and Condensed Tannin

Concentrations in Carolina Willow (Salix Caroliniana)." Zoo Biology 34 (6): 576-582.

doi:10.1002/zoo.21240. http://onlinelibrary.wiley.com (accessed June 20, 2016).










Leffler, A. J. and J. M. Welker. 2013. "Long-Term Increases in Snow Pack Elevate Leaf N and

Photosynthesis in Salix Arctica: Responses to a Snow Fence Experiment in the High Arctic of NW

Greenland." Environmental Research Letters 8 (2). doi:10.1088/1748-9326/8/2/025023.

http://iopscience.iop.org (accessed June 27, 2016).

Mata-González, R., T. L. Evans, D. W. Martin, T. McLendon, J. S. Noller, C. Wan, and R. E. Sosebee. 2014.

"Patterns of Water use by Great Basin Plant Species Under Summer Watering." Arid Land Research and

Management 28 (4): 428-446. doi:10.1080/15324982.2014.886088. http://www.tandfonline.com


Melcher, P. J. and M. A. Zwieniecki. 2013. "Functional Analysis of Embolism Induced by Air Injection in

Acer Rubrum and Salix Nigra." Frontiers in Plant Science 4 (SEP). doi:10.3389/fpls.2013.00368.

http://www.ncbi.nlm.nih.gov (accessed June 23, 2013).

Patankar, R., G. Starr, B. Mortazavi, S. Oberbauer, and A. Rosenblum. 2013. "The Effects of Mite Galling

on the Ecophysiology of Two Arctic Willows." Arctic, Antarctic, and Alpine Research 45 (1): 99-106.

doi:10.1657/1938-4246-45.1.99. http://www.bioone.org (accessed June 27, 2016).

Pattison, R. R. and J. M. Welker. 2014. "Differential Ecophysiological Response of Deciduous Shrubs and

a Graminoid to Long-Term Experimental Snow Reductions and Additions in Moist Acidic Tundra,

Northern Alaska." Oecologia 174 (2): 339-350. doi:10.1007/s00442-013-2777-6.


Pearse, I. S., K. Hughes, K. Shiojiri, S. Ishizaki, and R. Karban. 2013. "Interplant Volatile Signaling in

Willows: Revisiting the Original Talking Trees." Oecologia 172 (3): 869-875. doi:10.1007/s00442-013-


Pierce, S. C., M. B. Koontz, S. R. Pezeshki, and R. Kröger. 2013. "Response of Salix Nigra [Marsh.] Cuttings

to Horizontal Asymmetry in Soil Saturation." Environmental and Experimental Botany 87: 137-147.

doi:10.1016/j.envexpbot.2012.10.003. http://www.sciencedirect.com (accessed June 27, 2016).

Schifman, L. A., J. C. Stella, T. A. Volk, and M. A. Teece. 2012. "Carbon Isotope Variation in Shrub Willow

(Salix Spp.) Ring-Wood as an Indicator of Long-Term Water Status, Growth and Survival." Biomass and

Bioenergy 36: 316-326. www.sciencedirect.com (accessed May 17, 2016).

Sullivan, T. S., M. B. McBride, and J. E. Thies. 2013. "Rhizosphere Microbial Community and Zn Uptake by

Willow (Salix Purpurea L.) Depend on Soil Sulfur Concentrations in Metalliferous Peat Soils." Applied Soil

Ecology 67: 53-60. doi:10.1016/j.apsoil.2013.02.003. http://www.sciencedirect.com (accessed June 27,

2016).

Wang, W. and W. Zhu. 2012. "Soil Retention of 15N in a Simulated N Deposition Study: Effects of Live

Plant and Soil Organic Matter Content." Plant and Soil 351 (1-2): 61-72. doi:10.1007/s11104-011-0929-1.


Global Climate Change

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Euskirchen, E. S., T. B. Carman, and A. D. Mcguire. 2014. "Changes in the Structure and Function of

Northern Alaskan Ecosystems when Considering Variable Leaf-Out Times Across Groupings of Species in

a Dynamic Vegetation Model." Global Change Biology 20 (3): 963-978. doi:10.1111/gcb.12392.


Khorsand Rosa, R., S. F. Oberbauer, G. Starr, I. Parker La Puma, E. Pop, L. Ahlquist, and T. Baldwin. 2015.

"Plant Phenological Responses to a Long-Term Experimental Extension of Growing Season and Soil

Warming in the Tussock Tundra of Alaska." Global Change Biology 21 (12): 4520-4532.

doi:10.1111/gcb.13040. http://onlinelibrary.wiley.com (accessed June 23, 2016).

Potosnak, M. J., B. M. Baker, L. Lestourgeon, S. M. Disher, K. L. Griffin, M. S. Bret-Harte, and G. Starr.

2013. "Isoprene Emissions from a Tundra Ecosystem." Biogeosciences 10 (2): 871-889. doi:10.5194/bg-

10-871-2013. http://www.biogeosciences.net (accessed June 27, 2016).

Sharp, E. D., P. F. Sullivan, H. Steltzer, A. Z. Csank, and J. M. Welker. 2013. "Complex Carbon Cycle

Responses to Multi-Level Warming and Supplemental Summer Rain in the High Arctic." Global Change

Biology 19 (6): 1780-1792. doi:10.1111/gcb.12149. http://onlinelibrary.wiley.com (accessed June 27,

2016).

Entomology

Bultman, H., D. Hoekman, J. Dreyer, and C. Gratton. 2014. "Terrestrial Deposition of Aquatic Insects

Increases Plant Quality for Insect Herbivores and Herbivore Density." Ecological Entomology 39 (4): 419-

426. doi:10.1111/een.12118. http://onlinelibrary.wiley.com (accessed June 23, 2016).

Eckberg, J. O., G. A. Johnson, R. E. Pain, D. L. Wyse, and G. E. Heimpel. 2015. "Spillover of Tent Caterpillar

(Malacosoma Americanum) Herbivory Onto Willow Bioenergy Crops in an Agricultural Landscape."

Annals of Applied Biology 167 (2): 178-185. doi:10.1111/aab.12216. http://onlinelibrary.wiley.com


Hughes, K. M., I. S. Pearse, P. Grof-Tisza, and R. Karban. 2015. "Individual-Level Differences in Generalist

Caterpillar Responses to a Plant-Plant Cue." Ecological Entomology 40 (5): 612-619.

doi:10.1111/een.12224. http://onlinelibrary.wiley.com (accessed June 20, 2016).

Lehnert, M. S. and J. M. Scriber. 2012. "Salicaceae Detoxification Abilities in Florida Tiger Swallowtail

Butterflies (Papilio Glaucus Maynardi Gauthier): Novel Ability Or Pleistocene Holdover?" Insect Science

19 (3): 337-345. doi:10.1111/j.1744-7917.2011.01459.x. http://onlinelibrary.wiley.com (accessed June

27, 2016).

Orians, C. M., R. S. Fritz, C. G. Hochwender, B. R. Albrectsen, and M. E. Czesak. 2013. "How Slug

Herbivory of Juvenile Hybrid Willows Alters Chemistry, Growth and Subsequent Susceptibility to Diverse

Plant Enemies." Annals of Botany 112 (4): 757-765. doi:10.1093/aob/mct002.

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http://aob.oxfordjournals.org/

Pike, K. S., G. Graf, R. G. Foottit, H. E. L. Maw, C. Von Dohlen, J. Harpel, A. Pantoja, S. Emmert, and A. M.

Hagerty. 2012. "Eriosomatine Aphids (Hemiptera: Aphididae: Eriosomatinae) Associated with Moss and

Roots of Conifer and Willow in Forests of the Pacific Northwest of North America." Canadian

Entomologist 144 (4): 555-576. doi:10.4039/tce.2012.49. http://journals.cambridge.org (accessed June

27, 2016).

Price, P. W. and M. D. Hunter. 2015. "Population Dynamics of an Insect Herbivore Over 32 Years are

Driven by Precipitation and Host-Plant Effects: Testing Model Predictions." Environmental Entomology

44 (3): 463-473. doi:10.1093/ee/nvv039. www.scopus.com (accessed June 20, 2016).

Pathology

Kaczynski, K. M. and D. J. Cooper. 2013. "Susceptibility of Salix Monticola to Cytospora Canker Under

Increased Temperatures and Decreased Water Levels." Forest Ecology and Management 305: 223-228.


Kenaley, S. C., L. B. Smart, and G. W. Hudler. 2014. "Genetic Evidence for Three Discrete Taxa of

Melampsora (Pucciniales) Affecting Willows (Salix Spp.) in New York State." Fungal Biology 118 (8): 704-

720. doi:10.1016/j.funbio.2014.05.001. http://www.sciencedirect.com (accessed June 23, 2016).

Swain, S. V., S. T. Koike, T. J. Michailides, C. Feng, and J. C. Correll. 2012. "First Report of Twig Canker on

Willow Caused by Colletotrichum Acutatum in California." Plant Disease 96 (12): 1822. www.scopus.com


Toome, M. and M. C. Aime. 2015. "Reassessment of Rust Fungi on Weeping Willows in the Americas and

Description of Melampsora Ferrinii Sp. Nov." Plant Pathology 64 (1): 216-224. doi:10.1111/ppa.12237.


Travadon, R. and K. Baumgartner. 2015. "Molecular Polymorphism and Phenotypic Diversity in the

Eutypa Dieback Pathogen Eutypa Lata." Phytopathology 105 (2): 255-264. doi:10.1094/PHYTO-04-14-

0117-R. http://apsjournals.apsnet.org (accessed June 20, 2016).

Phytoremediation and Endophytes

Heintzman, R. L., J. E. Titus, and W. Zhu. 2015. "Effects of Roadside Deposition on Growth and Pollutant

Accumulation by Willow (Salix Miyabeana)." Water, Air, and Soil Pollution 226 (2). doi:10.1007/s11270-


Karnjanapiboonwong, A., R. Mu, Y. Yuan, H. Shi, Y. Ma, and J. G. Burken. 2012. "Plant Tissue Analysis for

Explosive Compounds in Phytoremediation and Phytoforensics." Journal of Environmental Science and

Health - Part A Toxic/Hazardous Substances and Environmental Engineering 47 (14): 2219-2229.


http://journals.cambridge.org/









Khan, Z., D. Roman, T. Kintz, M. Delas Alas, R. Yap, and S. Doty. 2014. "Degradation, Phytoprotection and

Phytoremediation of Phenanthrene by Endophyte Pseudomonas Putida, PD1." Environmental Science

and Technology 48 (20): 12221-12228. doi:10.1021/es503880t. http://pubs.acs.org (accessed June 23,

2016).

Meiman, P. J., N. R. Davis, J. E. Brummer, and J. A. Ippolito. 2012. "Riparian Shrub Metal Concentrations

and Growth in Amended Fluvial Mine Tailings." Water, Air, and Soil Pollution 223: 1815-1828.


Mirck, J. and T. A. Volk. 2012. "Mass Balances and Allocation of Salt Ions from Solvay Storm Water for

Shrub Willow (Salix Spp.)." Biomass and Bioenergy 39: 427-438. www.sciencedirect.com (accessed May

17, 2016).

Warsaw, A. L., R. Thomas Fernandez, D. R. Kort, B. M. Cregg, B. Rowe, and C. Vandervoort. 2012.

"Remediation of Metalaxyl, Trifluralin, and Nitrate from Nursery Runoff using Container-Grown Woody

Ornamentals and Phytoremediation Areas." Ecological Engineering 47: 254-263.

doi:10.1016/j.ecoleng.2012.06.036. http://www.sciencedirect.com (accessed June 27, 2016).

Management Operations

Batchelor, J. L., W. J. Ripple, T. M. Wilson, and L. E. Painter. 2015. "Restoration of Riparian Areas

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