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Zachary Sun, W. Clem Karl [email protected], [email protected] Current helical scanning computed tomography scanners provide detailed 3D imagery in the medical and security domain. However, these scanners often require significant power, cost, and space. Such computed tomography machines are impractical for many field based applications where space and power are often limited, such as security/customs portal screening or field medical clinics. Through the use of a conveyor belt, an Xray point source, and a flat panel detector we can achieve linear tomography without the need of spinning gantries. However, due to the limitedangle nature of the setup, direct inversion methods are impractical and iterative methods are required. This however incurs a high degree of computational complexity and we seek a preconditioner to speed up the convergence rate of the iterative Krylov method GMRES. We propose a preconditioner that reduces the problem into a series of 2D slice reconstructions. Linear tomography will bring tomographic imaging capabilities to areas such as checkpoint screening or medical field clinics that were previously inaccessible due to the power and size requirements. Helical CT Scanners used for checked bags provide increased detection of threats and lower false alarms Due to power, size, cost constraints, helical CT machines are illsuited for carryon screening Direct methods such as FeldkampDavisKress are illequipped to handle the limitedangle tomography problem. Best to use modelbased signal processing methods. Checkpoint screening will benefit from having tomographic images for luggage screening. This material is based upon work supported by the U.S. Department of Homeland Security under Award Number 2008-ST-061-ED0001. The views and conclusions contained in this document are those of the authors and should not be interpreted as necessarily representing the official policies, either expressed or implied of the U.S. Department of Homeland Security. Presented work at DHS Science Conference’s Student Day in Washington D.C. Poster presented at Boston University’s Science and Engineering Day received Honorable Mention. Explore means to speed up inversion of 2D slice reconstruction. Explore various regularization terms to improve reconstruction quality. Explore other means of parallelization to speed up computation via hardware. Preconditioning Linear Tomography for Explosive Detection Technical Approach Abstract Relevance Accomplishments Through Current Year Future Work Other References Publications Acknowledging DHS Support Opportunities for Transition to Customer Developed ability to achieve linear tomography without large rotating gantries Tomographic imaging possible within power, size, and cost constraints of traditional line scanners Checkpoint screeners will be empowered with tomographic images to increase detection of threats and lower false alarm rates to improve passenger comfort during travels Doctors in constrained environments will benefit from having tomographic images to improve diagnosis of patient illnesses 0 500 1000 1500 2000 2500 3000 3500 4000 0 500 1000 1500 2000 2500 3000 3500 4000 nz = 181846 Proposed Block Diagonal Preconditioner Reconstructed Render Each block diagonal element corresponds to solving the tomographic problem for a single slice 0 500 1000 1500 2000 2500 3000 3500 4000 4500 10 -6 10 -4 10 -2 10 0 10 2 10 4 10 6 10 8 Convergence of Relative Residual (||b-Ax||/||b||) Number of Iterations Relative Residual (||b-Ax||/||b|| GMRES Without Preconditioner GMRES With Proposed Preconditioner 0 500 1000 1500 2000 2500 3000 3500 4000 0 500 1000 1500 2000 2500 3000 3500 4000 nz = 372592 Non-Zero Values of C' * C Linear Tomography Model Original Render Reconstruction without Preconditioner after 1400 iterations Reconstruction with Preconditioner after 1400 iterations Original Volume Simulated Volumetric Data Slice #9 of Reconstruction without Preconditioner Slice #9 of Reconstruction with Preconditioner Sun, Z. & Karl, W. C. (2010). Non-Rotational Tomography for Luggage Screening Using Krylov Methods. Poster session presented at Research to Reality 11 th Annual Research and Industrial Collaboration Conference; 2010 Oct 19; Boston, MA. Sun, Z & Karl, W. C. (2011). Multi-View Linear Tomography for Explosives Detection in Carry-On Luggage. Poster presented at DHS Site Visit; 2011 Mar 24; Boston, MA Sun, Z & Karl, W. C. (2011). A Non-rotational Approach to Computed Tomography. Presentation at DHS Science Conference – Fifth Annual University Network Summit; 2011 Mar 30; Washington D.C. Geometric setup is modeled using Siddon’s method to simulate x-rays while an object moves laterally across a conveyor belt, which can be set up as a system of linear equations. Inversion is solved by using the iterative Krylov method GMRES to solve the normal equations (Eq. 1) Saad , Youcef & Schultz, Martin H. (1986). GMRES: A Generalized Minimal Residual Algorithm for Solving Nonsymmetric Linear Systems, SIAM J. Sci. and Stat. Comput. 7, 856-869; doi:10.1137/0907058 Siddon, R. L. (1985). Prism representation: a 3D ray-tracing algorithm for radiotherapy applications. Physics in Medicine and Biology, 30(8), 817-824. doi: 10.1088/0031-9155/30/8/005
Transcript

Zachary Sun, W. Clem [email protected][email protected]

Current helical scanning computed tomography scanners provide detailed 3D imagery in the medical and security domain. However, these scanners often require significant power, cost, and space. Such computed tomography machines are impractical for many field based applications where space and power are often limited, such as security/customs portal screening or field medical clinics. Through the use of a conveyor belt, an X‐ray point source, and a flat panel detector we can achieve linear tomography without the need of spinning gantries. However, due to the limited‐angle nature of the setup, direct inversion methods are impractical and iterative methods are required. This however incurs a high degree of computational complexity and we seek a preconditioner to speed up the convergence rate of the iterative Krylov method GMRES. We propose a preconditioner that reduces the problem into a series of 2D slice reconstructions. Linear tomography will bring tomographic imaging capabilities to areas such as checkpoint screening or medical field clinics that were previously inaccessible due to the power and size requirements.

• Helical CT Scanners used for checked bags provide increased detection of threats and lower false alarms• Due to power, size, cost constraints, helical CT machines are ill‐suited for carry‐on screening• Direct methods such as Feldkamp‐Davis‐Kress are ill‐equipped to handle the limited‐angle tomography problem. Best to use model‐based signal processing methods.• Checkpoint screening will benefit from having tomographic images for luggage screening.

This material is based upon work supported by the U.S. Department of Homeland Security under Award Number 2008-ST-061-ED0001. The views and conclusions contained in this document are those of the authors and should not be interpreted as necessarily representing the official policies, either expressed or implied of the U.S. Department of Homeland Security.

• Presented work at DHS Science Conference’s Student Day in Washington D.C.

• Poster presented at Boston University’s Science and Engineering Day received Honorable Mention.

• Explore means to speed up inversion of 2D slice reconstruction.

• Explore various regularization terms to improve reconstruction quality.

• Explore other means of parallelization to speed up computation via hardware.

Preconditioning Linear Tomography for Explosive Detection

Technical ApproachAbstract

Relevance

Accomplishments Through Current Year

Future Work

Other References

Publications Acknowledging DHS SupportOpportunities for Transition toCustomer

• Developed ability to achieve linear tomography without large rotating gantries

• Tomographic imaging possible within power, size, and cost constraints of traditional line scanners

• Checkpoint screeners will be empowered with tomographic images to increase detection of threats and lower false alarm rates to improve passenger comfort during travels

• Doctors in constrained environments will benefit from having tomographic images to improve diagnosis of patient illnesses

0 500 1000 1500 2000 2500 3000 3500 4000

0

500

1000

1500

2000

2500

3000

3500

4000

nz = 181846

Proposed Block Diagonal Preconditioner

Reconstructed Render

Each block diagonal element corresponds to solving the tomographic problem for a single slice

0 500 1000 1500 2000 2500 3000 3500 4000 450010-6

10-4

10-2

100

102

104

106

108Convergence of Relative Residual (||b-Ax||/||b||)

Number of Iterations

Rel

ativ

e R

esid

ual (

||b-A

x||/|

|b||

GMRES Without PreconditionerGMRES With Proposed Preconditioner

0 500 1000 1500 2000 2500 3000 3500 4000

0

500

1000

1500

2000

2500

3000

3500

4000

nz = 372592

Non-Zero Values of C' * C

Linear Tomography Model

Original Render

Reconstruction without Preconditioner after 1400 iterations Reconstruction with Preconditioner after 1400 iterations

Original Volume

Simulated Volumetric Data

Slice #9 of Reconstruction without Preconditioner

Slice #9 of Reconstruction with Preconditioner

Sun, Z. & Karl, W. C. (2010). Non-Rotational Tomography for Luggage Screening Using Krylov Methods. Poster session presented at Research to Reality 11th Annual Research and Industrial Collaboration Conference; 2010 Oct 19; Boston, MA.

Sun, Z & Karl, W. C. (2011). Multi-View Linear Tomography for Explosives Detection in Carry-On Luggage. Poster presented at DHS Site Visit; 2011 Mar 24; Boston, MA

Sun, Z & Karl, W. C. (2011). A Non-rotational Approach to Computed Tomography. Presentation at DHS Science Conference – Fifth Annual University Network Summit; 2011 Mar 30; Washington D.C.

Geometric setup is modeled using Siddon’s method to simulate x-rays while an object moves laterally across a conveyor belt, which can be set up as a system of linear equations. Inversion is solved by using the iterative Krylov method GMRES to solve the normal equations (Eq. 1)

Saad , Youcef & Schultz, Martin H. (1986). GMRES: A Generalized Minimal Residual Algorithm for Solving Nonsymmetric Linear Systems, SIAM J. Sci. and Stat. Comput. 7, 856-869; doi:10.1137/0907058

Siddon, R. L. (1985). Prism representation: a 3D ray-tracing algorithm for radiotherapy applications. Physics in Medicine and Biology, 30(8), 817-824. doi: 10.1088/0031-9155/30/8/005

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