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Progeny Lab Overview

Date post: 26-Jun-2015
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LAB Genotype Data Management V1.0 1
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Page 1: Progeny Lab Overview

LABGenotype Data Management

V1.01

Page 2: Progeny Lab Overview

ABOUT US

1900 UNIQUE SITES CLINICALPedigree and Clinical Data

LABGenotype Data Management

LIMSSample and Lab Management

FHQFamily History Questionnaire

78 COUNTRIES

Page 3: Progeny Lab Overview

A FEW OF OUR 1900 CLIENTS

UNITED STATESARUP LabsBaylor College of MedicineBristol Meyers SquibCedars-Sinai Medical CenterChildren's Hospital of PhiladelphiaCity of HopeCleveland Clinic FoundationColumbia UniversityDana Farber Cancer InstituteDuke University Medical CenterGENENTECHGlaxoSmithKlineHarvard Medical SchoolJohn Hopkins School of MedicineMayo ClinicMemorial Sloan-Kettering Cancer CenterMGHNational Cancer InstituteNational Institutes of HealthStanford University

UCLA School of MedicineUniversity of California, IrvineUniversity of IowaUniversity of PennsylvaniaUniversity of PittsburghUniversity of Texas, MD Anderson Cancer CenterUniversity of UtahUSCVanderbilt University

CANADAAlberta Children’s HospitalBC Cancer AgencyMcGill University Health CentreMemorial University NewfoundlandMount Sinai HospitalOntario Cancer Treatment & Research FoundationRCMP Central Forensic LabThe Hospital for Sick ChildrenToronto General HospitalToronto-Sunnybrook

Page 4: Progeny Lab Overview

A FEW OF OUR 1900 CLIENTS

UNITED KINGDOM - EUROPEAarhus University Hospital, AASBelfast City HospitalCambridge UniversityCCK, Karolinska InstituteErasmus University-RotterdamHelsinki University Central HospitalHopital Neckler Enfants MaladesIceland Genomics/UVSInstitute of Cancer ResearchKarolinska HospitalLeiden University Medical CenterMalmö University HospitalSt. James's HospitalThe Royal Edinburgh HospitalUniversity of LeuvenUniversity of OsloUniversity of RegensburgUniversity of TartuUniversity of ViennaUppsala University Wellcome Trust Centre for Human Genetics

AUSTRALIA – NEW ZEALANDAuckland HospitalInternational Diabetes InstitutePeter McCallum Cancer InstituteQueensland Institute of Medical ResearchRoyal Melbourne HospitalSt. George HospitalSt. Vincent's HospitalUniversity of OtagoWestmead Hospital

MIDDLE EAST – FAR EASTCancer Institute WIAJunshinkai Familial Cancer InstituteKing Faisal Specialist Hospital & Research CentreNational Cancer Center Research InstituteNational Taiwan UniversityRadiation Effects Research FoundationSamsung Cheil Hospital, Sungkunkwan UniversityTaipei Medical UniversityUAE UniversityWeizmann Institute of Science

Page 5: Progeny Lab Overview

SINGLE LICENSE INSTALLATION

WINDOWS SINGLE-USER LICENSE

The software application and the database is on the local PC. If you only have 1 user of the software, this will work.

PROGENY DATABASE

PROGENY CLIENT

Page 6: Progeny Lab Overview

CLIENT SERVER INSTALLATION

WINDOWS MULTI-USER ACCESS

Database is on the server. Progeny application is installed on each Windows PC that accesses the database on the server.

PROGENY CLIENT

PROGENY DATABASEWINDOWS OR LINUX SERVER

PROGENY CLIENTPROGENY CLIENT

Page 7: Progeny Lab Overview

WEB SERVER INSTALLATION

PLATFORM INDEPENDENT ACCESS

Progeny Web Application and Database can be installed on the same Server.

Progeny LAB can only be installed on a Windows PC. There is no option to install LAB as a Web Client application. You can however use Progeny Clinical to access the database from a Web Client and view genotypes in the pedigree.

Web browsers supported:Chrome, Firefox, Safari, IE8 or newer

CLINICAL WEB BROWSER CAN VIEW

GENOTYPES

WINDOWS PCADMINISTRATOR

PROGENY LAB

CLINICAL WEB BROWSER CAN VIEW

GENOTYPES

PROGENY WEB APP & DATABASEWINDOWS OR LINUX SERVER

Page 8: Progeny Lab Overview

WEB SERVER INSTALLATION WITH REMOTE ACCESS

To provide remote access to the application, setup the Web application in the DMZ as shown above. The Web application, database and administrator license reside behind a firewall, so there is no compromising of any data.

CLINICAL WEB BROWSER CAN VIEW

GENOTYPES

PROGENY DATABASEWINDOWS OR LINUX SERVER

WINDOWS PCADMINISTRATOR

PROGENY LAB

REMOTE USER CORPORATE LANDMZ

PROGENY WEB APPLICATION WINDOWS OR LINUX SERVER

APACHE TOMCAT(OR SIMILAR CONTAINER)

Page 9: Progeny Lab Overview

CUSTOMIZABLE DATABASE

Create unlimited fields to track individual, pedigree, sample, and marker data.

Page 10: Progeny Lab Overview

DATA ENTRY SCREENS

Create custom screens and track data on individuals, pedigrees or samples.

Page 11: Progeny Lab Overview

IMPORT DATA

Import existing pedigree, individual, or sample data from Excel or other databases.

Page 12: Progeny Lab Overview

PEDIGREE DRAWING

Draw complex pedigrees quickly with thousands of individuals and multiple consanguineous relationships.

Page 13: Progeny Lab Overview

FLEXIBLE SYMBOLS

Create unlimited icon symbol formats and display any data field on the pedigree.

Page 14: Progeny Lab Overview

MANAGE PEDIGREES

Create as many folders while managing an unlimited number of pedigrees.

Page 15: Progeny Lab Overview

MANAGE INDIVIDUALS

Add individuals anytime and attach them to a new or existing pedigree when ready.

Page 16: Progeny Lab Overview

MANAGE SAMPLES

Manage sample data and link these samples to any individual.

Page 17: Progeny Lab Overview

SAMPLE DATASHEET

Create your own data entry screens to track any sample data.

Page 18: Progeny Lab Overview

MANAGE MARKER SETS

Manage unlimited marker sets. Create custom sets to handle animals or plants.

Page 19: Progeny Lab Overview

IMPORT GENOTYPE DATA

Import genotype data from any type of file you want. Error check for mendelian errors, missing markers, etc…

Page 20: Progeny Lab Overview

VIEW GENOTYPE DATA

Display haplotypes directly on the pedigree to visually identify genetic inheritance.

Page 21: Progeny Lab Overview

EXPORT DATA FOR ANALYSIS

Export data to any type of analysis software. Even create your own custom export format.

Page 22: Progeny Lab Overview

SPREADSHEET REPORTING

Generate custom spreadsheets to query and analyze your marker data with phenotypic data…and export selected data to other programs as desired.

Page 23: Progeny Lab Overview

FAMILY HISTORY QUESTIONNAIRE

Our Web Data Capture Tool (sold separately) drops family history data and pedigree (automatically drawn) securely and seamlessly into Progeny Lab.

…an efficient tool for clinical trials, risk studies, clinical and research projects.

Page 24: Progeny Lab Overview

Robotic Integration

EMR/EHR

Clinical Data Repository

Clinical Research

Clinical Systems

PIP

SHARE DATA ACROSS SYSTEMS

Sold separately, the PIP allows you to route data between Progeny and another existing data source.

This module can also stand on its own, and can actually route data between two existing data sources that have nothing to do with Progeny.

PROGENY INTEGRATION PLATFORM (PIP)

Page 25: Progeny Lab Overview

Example – Marker Data to Progeny LAB

Data from an existing marker set may exist in a file that is external to Progeny. You may want to have that data dynamically link to Progeny’s database to update the data as it changes in the external file. The PIP can automate this process.

PROGENY INTEGRATIONSERVICES

PROGENY DATABASE

EXTERNALMARKER

DATA

PROGENY INTEGRATION PLATFORM (PIP)

Page 26: Progeny Lab Overview

PROGENY SUPPORT PLAN (PSP)

PSP IS AN ANNUAL SUPPORT PLAN THAT PROVIDES:

• Unlimited 800 Phone and email support FREE

• WebEx sessions to diagnose any problems for FREE

• Updates, New Releases, tech support for FREE

• Custom training available on-site or via WebEx

• On-line video tutorials available via our website

Page 27: Progeny Lab Overview

WHY PROGENY?

WE’RE COMMITTED TO…

• Utilize 17 years of software expertise to service over 1900 unique sites in 78 countries.

• Listen to our customers and deliver the most effective and efficient customized solution – we don’t oversell!

• Deliver personalized training and tools to get you up and running without delay – at no additional cost.

• Provide exceptional toll-free support – answered live by knowledgeable technicians.

• Believe that if you’re completely satisfied, we’ll both be successful.

Page 28: Progeny Lab Overview

CONTACT US

QUESTIONS?

Conrad BrammerAccount Executive

Progeny Software, LLC800 Palm Trail, Suite 200 Delray Beach, FL 33483

1.800.PROGENY Ext 211866.479.6801 Fax

www.progenygenetics.com

[email protected]


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