RiverMonster

Genes 1-40

Background

• Purdue University

• 40.443439 N, 86.896408 W

• March 16, 2012

• Cluster E

Similarities

Genes 1-20

•Easy decisions generally

•Gene 4 - hardest decision

Genes 21-40

•Functionality of genes

•Tail and head proteins seem to be abundant

•Identification of gene that coded for humans in addition to M. tuberculosis

•Theoredoxin, oxidoreductase

•Rossmann folds

Genes 21-40 cont.

•Identification of Shine-Delgarno score of 903

•Beta-lactamase

•Lack of knowledge about Gene 27 functionality

Class Challenge

•Preliminary phams to used for clusters identified

•Acquisition of database

•SQL

•Generation of program

Future Work

•Identification of Gene 27 function

•Generate map of related phages and their location

•Lack of knowledge about genealogy of phages

•Aggregate or linear?

•Clusters from mass-spec analysis