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Soft Agar Protocol

Date post: 27-Apr-2015
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A) SOFT AGAR METHOD. Principle: Soft agar method used to measure cell anchorage-independent proliferation potential, is one of the most important and most commonly used assays to detect cell transformation. Also to study cytotoxic nature of any new drug compound. Material Required: a. Reagent A: 2X plain media containing 20% F.B.S, 4mM L- Glutamine, 2X NEAA, 0.6% sodium bicarbonate, 2% sodium pyruvate, 200U/ml penicillin/Streptomycin. Composition for 100ml- 2X plain media (According to cell line): 73.4 ml FBS : 20 ml Glutamine(200mM) : 2 ml 2X NEAA (Non essential amino acids) : 0.6 ml Sodium pyruvate : 2 ml Antibiotics : 2 ml b. Reagent B: 1.2% Bacto Agar. (prewarm to 56 degree centigrade before use). c. Reagent C: 0.8% Bacto Agar. Protocol:
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Page 1: Soft Agar Protocol

A) SOFT AGAR METHOD.

Principle: Soft agar method used to measure cell anchorage-independent proliferation potential, is one of the most important and most commonly used assays to detect cell transformation. Also to study cytotoxic nature of any new drug compound.

Material Required:

a. Reagent A: 2X plain media containing 20% F.B.S, 4mM L-Glutamine, 2X NEAA, 0.6% sodium bicarbonate, 2% sodium pyruvate, 200U/ml penicillin/Streptomycin.

Composition for 100ml-

2X plain media (According to cell line): 73.4 ml FBS : 20 ml

Glutamine(200mM) : 2 ml2X NEAA (Non essential amino acids) : 0.6 mlSodium pyruvate : 2 mlAntibiotics : 2 ml

b. Reagent B: 1.2% Bacto Agar. (prewarm to 56 degree centigrade before use).

c. Reagent C: 0.8% Bacto Agar.

Protocol:

1. A mixture of 50µl of Reagent A and 50µl of Reagent B were plated onto each well of a 96-well microtitre assay plate.

2. 10µl of cells (of specific cell count standardize for respective cell lines) were mixed with 20µl Reagent A and 30µl Reagent C + 2µl of drug, in a vial and transferred to the solidified prelayers of the assay plate.

3. Allow the cells to grow at 37 degree centigrade and 5% CO2 for 1 weeks.

4. When the cell colonies are developed score the colonies using Alamar Blue.

5. Measure the cell growth by reading the absorbance at 570nm.

Page 2: Soft Agar Protocol

Template when standardization of plating efficiency was done.In each pink block different cell density was plated.

Template when comparison with Cisplatin and CleI were did.

Cell line 1

Cell line 2

Cispaltin with 4 diff concentration

CleI with 4 diff concentration

Cispaltin with 4 diff concentration

CleI with 4 diff concentration


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