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SOURCE APPORTIONMENT AND POLLUTION LOADING IN LAKE CHINI WATERSHED USING MULTIVARIATE STATISTICAL ANALYSIS MD YASIR ARAFAT Master of Science UNIVERSITI MALAYSIA PAHANG
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SOURCE APPORTIONMENT AND

POLLUTION LOADING IN LAKE CHINI

WATERSHED USING MULTIVARIATE

STATISTICAL ANALYSIS

MD YASIR ARAFAT

Master of Science

UNIVERSITI MALAYSIA PAHANG

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SUPERVISOR’S DECLARATION

We hereby declare that we have checked this thesis and in our opinion, this thesis is

adequate in terms of scope and quality for the award of the degree of Master of Science

in Civil Engineering and Earth Resources.

_______________________________

(Supervisor’s Signature)

Full Name : DR. MIR SUJAUL ISLAM

Position : SENIOR LECTURER

Date :

_______________________________

(Co-supervisor’s Signature)

Full Name : PROF. DR. ZULARISAM BIN AB WAHID

Position : PROFESSOR

Date :

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STUDENT’S DECLARATION

I hereby declare that the work in this thesis is based on my original work except for

quotations and citations which have been duly acknowledged. I also declare that it has

not been previously or concurrently submitted for any other degree at Universiti Malaysia

Pahang or any other institutions.

_______________________________

(Student’s Signature)

Full Name : MD YASIR ARAFAT

ID Number : MAM14001

Date : 16/10/2017

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SOURCE APPORTIONMENT AND POLLUTION LOADING IN LAKE CHINI

WATERSHED USING MULTIVARIATE STATISTICAL ANALYSIS

MD YASIR ARAFAT

Thesis submitted in fulfillment of the requirements

for the award of the degree of

Master of Science

Faculty of Civil Engineering and Earth Resources

UNIVERSITI MALAYSIA PAHANG

OCTOBER 2017

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ii

ACKNOWLEDGEMENTS

I am grateful and would like to express my deep gratitude to my supervisor senior lecturer

Dr. Mir Sujaul Islam for his germinal ideas, invaluable guidance, continuous inspiration

and support for completion of this research. He always impressed me with his outstanding

professional skill, a strong conviction for science and his belief that the master program

is just the beginning of learning experience. I appreciate his consistence support from the

very first day of my graduate application drop till the concluding moments. Honestly, I

am grateful for his progressive vision about my training in science, his tolerance of my

naïve (silly) mistakes and his commitment to my future career. I would like to gratitude

special thanks to my co-supervisor Professor Dr. Zularisam AB Wahid for his invaluable

suggestion, friendly cooperation and most importantly research funding for this research.

My sincere thanks go to all my lab mates and members of the staff of Civil Engineering

and Earth Resources Faculty, UMP, who believed one of them and made my life in UMP

pleasant and unforgettable. My special thanks go to the technical staff of Environmental

Laboratory and Hydrology Laboratory in UMP; and UKM Research Center at Tasik

Chini. I am grateful to my co-researcher Md. Golam Rasul for assisting in laboratory

analyses, data arranging and in statistical steps as a trainee.

I acknowledge my sincere indebtedness and gratitude to my parents for their love, dream

and sacrifice throughout my life. I also acknowledge the sincerity and patience of my

parents, who consistently encouraged me to carry on my higher studies in Malaysia. I

can’t express in proper words that could properly describe my appreciation for their

devotion, support and faith on me to reach my goal. Special thanks should be given to

my committee members. I would like to acknowledge their comments and suggestions,

which was crucial for the successful completion of this study.

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v

TABLE OF CONTENT

DECLARATION

TITLE PAGE i

ACKNOLEDGEMENT ii

ABSTRAK iii

ABSTRACT iv

TABLE OF CONTENT v

LIST OF TABLES xii

LIST OF FIGURES xiii

LIST OF ABBREVIATIONS xvi

CHAPTER 1 INTRODUCTION 1

1.1 Introduction 1

1.2 Problem Statement 6

1.3 Significance of the Study 8

1.4 Objectives of the Study 9

1.5 Scope of the Study 9

CHAPTER 2 LITERATURE REVIEW 10

2.1 Introduction 10

2.2 Land Use and Land Cover 11

2.3 Surface Water Quality Studies 12

2.3.1 Physicochemical Parameters 12

2.3.2 Inorganic Nutrients 16

2.3.3 Heavy Metals 18

2.3.4 Microbial Monitoring 19

2.4 Water Quality Index (WQI) 21

2.4.1 National Sanitation Foundation Water Quality Index (NSFWQI) 23

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vi

2.4.2 Canadian Council of Ministers of Environment Water Quality 23

Index (CCME WQI)

2.4.3 Oregon Water Quality Index (OWQI) 24

2.4.4 Weighted Arithmetic Water Quality Index Method 25

2.5 Previous Water Quality Studies in Lake Chini 25

2.6 Sediment Pollution 27

2.6.1 Previous Sediment Studies in Lake Chini 28

CHAPTER 3 METHODOLOGY 30

3.1 Introduction 30

3.2 Study Area 30

3.2.1 Location 30

3.2.2 Climate 31

3.2.3 Geology 32

3.3 Selection of Water and Sediment Sampling Sites 32

3.4 Frequency of Water Sampling and Rainfall Data 35

3.5 Water Sampling and Analysis 35

3.5.1 In Situ Measurement 36

3.5.2 Ex Situ Measurement 36

3.5.3 Water Quality Assessment 37

3.5.4 Water Quality Index (WQI) 38

3.6 Sediment Sampling Analysis 38

3.6.1 Heavy Metals 39

3.6.2 Particle Size Analysis 39

3.6.3 Other Parameters 39

3.7 Pollution Loading Techniques in Sediment 39

3.7.1 Sediment Contamination Assessment 39

3.7.2 Sediment Quality Guideline (SQGs) 39

3.7.3 Contamination Factor (CF) 40

3.7.4 The Geo-accumulation Index (Igeo) 40

3.7.5 Pollution Load Index (PLI) 41

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3.8 Statistical Analysis 41

3.8.1 Pearson’s Correlation Coefficients (r) 41

3.8.2 Analysis of Variance (ANOVA) 42

3.8.3 Cluster Analysis (CA) 42

3.8.4 Principal Component Analysis (PCA) 42

CHAPTER 4 WATER QUALITY ASSESSMENT 43

4.1 Introduction 43

4.2 Physicochemical Parameters and Their Status 44

4.2.1 Temperature 44

4.2.2 pH 46

4.2.3 Electrical Conductivity (EC) 47

4.2.4 Total Dissolved Solid (TDS) 49

4.2.5 Turbidity 50

4.2.6 Total Suspended Solids (TSS) 52

4.2.7 Dissolved Oxygen (DO) 53

4.2.8 Biochemical Oxygen Demand (BOD) 55

4.2.9 Chemical Oxygen Demand (COD) 57

4.2.10 Ammoniacal Nitrogen (NH3-N) 58

4.2.11 Sulphate (SO42−) 60

4.2.12 Phosphate (PO42−) 62

4.2.13 Total Nitrogen (TN) 64

4.3 Biological Parameters 65

4.3.1 Total Coliform 65

4.3.2 Escherichia coli (E coli) 67

4.4 Heavy Metals Contamination 68

4.4.1 Iron (Fe) 68

4.4.2 Manganese (Mn) 70

4.4.3 Copper (Cu) 72

4.4.4 Zinc (Zn) 73

4.4.5 Barium (Ba) 74

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CHAPTER 5 PHYSICOCHEMICAL PROPERTIES OF SEDIMENTS 77

5.1 Introduction 77

5.2 pH 77

5.3 Electrical Conductivity (EC) 78

5.4 Organic Matter (OM) 79

5.5 Particle Size Distribution 80

5.6 Heavy Metals Concentrations within the Lake Water Sediments 81

5.6.1 Zinc (Zn) 82

5.6.2 Arsenic (As) 83

5.6.3 Cupper (Cu) 83

5.6.4 Cobalt (Co) 84

5.6.5 Lead (Pb) 85

5.6.6 Manganese (Mn) 86

5.6.7 Iron (Fe) 87

5.6.8 Barium (Ba) 87

CHAPTER 6 SOURCE APPORTIONMENT AND POLLUTION 89

LOADING

6.1 Source Apportionment of Physico-chemical Parameters and Heavy

Metals in Surface Water 89

6.1.1 Multivariate Statistical Analysis of Measured Parameters 89

6.1.1.1 Water Quality Calculation in Accordance with 91

DOE-WQI

6.1.1.2 Pearson Correlation Coefficient 93

6.1.1.3 Principal Component Analysis (PCA) 93

6.1.1.4 Cluster Analysis 95

6.1.1.4.1 HCA of Physico-chemical Parameters 96

6.1.1.4.2 HCA of Heavy Metals in Lake Water 96

6.1.2 Conclusion 98

6.2 Source Apportionment and Pollution Loading in Sediments 98

6.2.1 Descriptive Statistics of Measured Parameters 98

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ix

6.2.2 Geo-accumulation Index (Igeo) and Degree of Pollution 100

6.2.3 Contamination Factor (CF) and Pollution Load Index (PLI) 101

6.2.4 Pearson’s Correlation Coefficient 102

6.2.5 Cluster Analysis 102

6.2.6 Conclusion 103

CHAPTER 7 CONCLUSION 104

7.1 Introduction 104

7.2 Water Quality 104

7.3 Source Apportionment in Water Pollution 104

7.4 Pollution Loading in Sediment Quality 105

7.5 Recommendations 105

REFERENCES 107

APPENDICES 127

A National Water Quality Standards (NWQS), Malaysia, for the

Following Parameters

127

National Water Quality Standards (NWQS), Malaysia for Selected

Heavy Metals

Water Classes and Uses for NWQS, Malaysia

B List of Best Fit Equations for the Estimation of Various Sub-Index

of DOE-WQI

129

C Average Monthly Precipitation Data in the Chini Lake (January

2015- December 2015)

129

D1 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L1

130

D2 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L2

131

D3 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L3

132

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x

D4 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L4

133

D5 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L5

134

D6 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L6

135

D7 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L7

136

D8 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L8

137

D9 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L9

138

D10 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station L10

139

D11 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station T1

140

D12 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station T2

141

D13 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station T3

142

D14 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station T4

143

D15 Mean, Standard Deviation and Ranges of Water Quality Indicators

in Lake Chini, Station T5

144

E1 Heavy Metals Status of the Chini Lake Water in Station L1 145

E2 Heavy Metals Status of the Chini Lake Water in Station L2 145

E3 Heavy Metals Status of the Chini Lake Water in Station L3 146

E4 Heavy Metals Status of the Chini Lake Water in Station L4 146

E5 Heavy Metals Status of the Chini Lake Water in Station L5 147

E6 Heavy Metals Status of the Chini Lake Water in Station L6 147

E7 Heavy Metals Status of the Chini Lake Water in Station L7 148

E8 Heavy Metals Status of the Chini Lake Water in Station L8 148

E9 Heavy Metals Status of the Chini Lake Water in Station L9 149

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E10 Heavy Metals Status of the Chini Lake Water in Station L10 149

E11 Heavy Metals Status of the Chini Lake Water in Station T1 150

E12 Heavy Metals Status of the Chini Lake Water in Station T2 150

E13 Heavy Metals Status of the Chini Lake Water in Station T3 151

E14 Heavy Metals Status of the Chini Lake Water in Station T4 151

E15 Heavy Metals Status of the Chini Lake Water in Station T5 152

F Pearson Correlation Coefficient for the Studied Water Quality

Parameters

153

G Sediment Quality Guidelines (SQGS) and the Sediment

Contamination Assessment

154

H Certified Values of Selected Heavy Metals in Standard Reference

Material ® 4353

154

I Geo-accumulation Index for the Sediments of 10 Monitoring

Stations in Wet Season

155

Geo-accumulation Index for the Sediments of 10 Monitoring

Stations in Dry Season

J Contamination Factors and Pollution Load Index for the Sediments

of 10 Monitoring Stations in Wet Season

156

Contamination Factors and Pollution Load Index for the Sediments

of 10 Monitoring Stations in Dry Season

K Average Values of Physicochemical Parameters in Sediments over

Seasons

157

L Average Values of Heavy Metals in Sediments over Seasons 157

M Pearson Correlation Coefficient Matrix of Studied Parameters in

Sediment

158

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xii

LIST OF TABLES

Table 2.1 Changes in land use pattern and covering area in relation with

time (1984-2002)

11

Table 2.2 Different prominent studies on water quality at Lake Chini 26

Table 2.3 Different prominent studies on sediment assessment and

loading at Lake Chini

29

Table 3.1 Locations of water sampling stations and characteristics of the

surrounding area

34

Table 3.2 Equipment used for infield physico-chemical measurement 36

Table 3.3 Methods and equipment used for physical measurement 36

Table 3.4 Methods and equipment used for chemical measurement 37

Table 3.5 Methods and equipment used for biological measurement 37

Table 3.6 Methods for the measurement of pH and organic matter (OM) 39

Table 3.7 The degree of metal pollution in terms of seven enrichment

classes

41

Table 6.1 Mean values of selected physico-chemical parameters at 15

sampling stations during the study period

90

Table 6.2 Mean values of selected heavy metals at 15 sampling stations

during the study period

91

Table 6.3 Average water quality index in all stations based on DOE-WQI 92

Table 6.4 Average water quality index in the sampling months based on

DOE-WQI

92

Table 6.5 Rotated Component Matrix (Extraction Method: Principal

Component Analysis)

94

Table 6.6 Dimension reductions of contaminants based on loading

strength in the studied samples

94

Table 6.7 Sediment particle size distribution during dry season in 10

sampling stations

99

Table 6.8 Sediment particle size distribution during wet season in 10

sampling stations

99

Table 6.9 Selected heavy metals concentration in sediments during dry

season

100

Table 6.10 Selected heavy metals concentration in sediments during wet

season

100

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xiii

LIST OF FIGURES

Figure 3.1 Flow chart of research activities followed in this study. 31

Figure 3.2 Locations of water sampling stations along the Chini Lake and

along its catchment tributaries.

33

Figure 4.1 Seasonal distribution of temperature at Chini Lake during

sampling months.

45

Figure 4.2 Spatial variation of temperature along the sampling stations at

Chini Lake.

45

Figure 4.3 Seasonal distribution of pH at Chini Lake during the sampling

months.

46

Figure 4.4 Spatial variation of pH along the sampling stations at Chini

Lake.

47

Figure 4.5 Seasonal distribution of EC at Chini Lake during the sampling

months.

48

Figure 4.6 Spatial variation of EC along the sampling stations at Chini

Lake.

48

Figure 4.7 Seasonal distribution of TDS at Chini Lake during the

sampling months

49

Figure 4.8 Spatial variation of TDS along the sampling stations at Chini

Lake.

50

Figure 4.9 Seasonal distribution of Turbidity at Chini Lake during the

sampling months.

51

Figure 4.10 Spatial variation of Turbidity along the sampling stations at

Chini Lake.

51

Figure 4.11 Seasonal distribution of TSS at Chini Lake during the

sampling months.

52

Figure 4.12 Spatial variation of TSS along the sampling stations at Chini

Lake.

53

Figure 4.13 Seasonal distribution of TSS at Chini Lake during the

sampling months.

54

Figure 4.14 Spatial variation of TSS along the sampling stations at Chini

Lake.

54

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xiv

Figure 4.15 Seasonal distribution of BOD at Chini Lake during the

sampling months.

55

Figure 4.16 Spatial variation of BOD along the sampling stations at Chini

Lake.

56

Figure 4.17 Seasonal distributions of COD at Chini Lake during the

sampling months.

57

Figure 4.18 Spatial variation of COD along the sampling stations at Chini

Lake.

58

Figure 4.19 Seasonal distribution of AN at Chini Lake during the sampling

months.

58

Figure 4.20 Spatial variation of AN along the sampling stations at Chini

Lake.

59

Figure 4.21 Seasonal distribution of sulphate at Chini Lake during the

sampling months.

60

Figure 4.22 Spatial variation of sulphate along the sampling stations at

Chini Lake.

61

Figure 4.23 Seasonal distribution of phosphate at Chini Lake during the

sampling months.

63

Figure 4.24 Spatial variation of phosphate along the sampling stations at

Chini Lake.

63

Figure 4.25 Seasonal distribution of total nitrogen at Chini Lake during

the sampling months.

64

Figure 4.26 Spatial variation of total nitrogen along the sampling stations

at Chini Lake.

65

Figure 4.27 Seasonal distribution of total coliform at Chini Lake during

the sampling months.

66

Figure 4.28 Spatial variation of total coliform along the sampling stations

at Chini Lake.

66

Figure 4.29 Seasonal distribution of E coli at Chini Lake during the

sampling months.

67

Figure 4.30 Spatial variation of E coli along the sampling stations at Chini

Lake.

68

Figure 4.31 Spatial distribution of Fe concentration in Chini Lake water. 69

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Figure 4.32 Monthly variation of Fe in water along 15 sampling stations

in Chini Lake.

69

Figure 4.33 Spatial distribution of Mn concentration in Chini Lake water. 70

Figure 4.34 Monthly variation of Mn in water along 15 sampling stations

in Chini Lake.

71

Figure 4.35 Spatial distribution of Cu concentration in Chini Lake water. 72

Figure 4.36 Monthly variation of Cu in water along 15 sampling stations

in Chini Lake.

72

Figure 4.37 Spatial distribution of Zn concentration in Chini Lake water. 74

Figure 4.38 Monthly variation of Zn in water along 15 sampling stations

in Chini Lake.

74

Figure 4.39 Spatial distribution of Ba concentration in Chini Lake water. 75

Figure 4.40 Monthly variation of Ba in water along 15 sampling stations

in Chini Lake.

75

Figure 5.1 Average pH values in the studied sediment at 10 stations over

seasons.

78

Figure 5.2 Average EC values in the studied sediment at 10 stations over

seasons.

79

Figure 5.3 Average OM% in the studied sediment at 10 stations over

seasons.

79

Figure 5.4 Average sand percentage in the studied sediment at 10 stations

over seasons.

80

Figure 5.5 Average silt percentage in the studied sediment at 10 stations

over seasons.

81

Figure 5.6 Average clay percentage in the studied sediment at 10 stations

over seasons.

81

Figure 5.7 Average Zn concentrations in the studied sediment at 10

stations over seasons.

82

Figure 5.8 Average As concentrations over 10 sampling stations over

seasons.

83

Figure 5.9 Average Cu concentrations over 10 sampling stations over

seasons.

84

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xvi

Figure 5.10 Average Co concentrations over 10 sampling stations over

seasons.

85

Figure 5.11 Average Pb concentrations over 10 sampling stations over

seasons.

85

Figure 5.12 Average Ba concentrations over 10 sampling stations over

seasons.

86

Figure 5.13 Average Ba concentrations over 10 sampling stations over

seasons.

87

Figure 5.14 Average Ba concentrations over 10 sampling stations over

seasons.

88

Figure 6.1 Component plot in rotated shape for the physic-chemical

parameters and heavy metals.

95

Figure 6.2 Hierarchical cluster analyses of 15 stations for

physicochemical parameters.

96

Figure 6.3 Hierarchical cluster analyses of 15 stations for heavy metals

in water.

97

Figure 6.4 Dendrogram of cluster analysis of sediment sampling stations. 103

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xvii

LIST OF ABBREVIATIONS

AOAC Association of Official Analytical Chemists

ANOVA Analysis of Variance

APHA American Public Health Association

BOD Biochemical Oxygen Demand

COD Chemical Oxygen Demand

DO Dissolved Oxygen

DOE Department of Environment

EPA Environmental Protection Agency

EQRM Environment Quality Regulations, Malaysia

FAO Food and Agricultural Organization

GPS Global Positioning System

ICPMS Inductively Coupled Plasma Membrane

NWQS National Water Quality Standards

NH4-N Ammonia-cal nitrogen (AN)

ppb parts per billion

ppm parts per million

TDS Total Dissolved Solids

TSS Total Suspended Solids

WQI Water Quality Index

TN Total Nitrogen

TP Total Phosphate


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