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The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan Group Meeting April 17, 2013
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Page 1: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

The Chemistry of Nine-Membered

Enediyne Natural Products

Zhang Wang

MacMillan Group Meeting

April 17, 2013

Page 2: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Natural Products Sharing a Unique Structure

Oh, D.-C.; Williams, P. G.; Kauffman, C. A.; Jensen, P. R.; Fenical, W. Org. Lett. 2006, 8, 1021-1024.Buchanan, G. O.; Williams, P. G.; Feling R. H.; Kauffman, C. A.; Jensen, P. R.; Fenical, W. Org. Lett. 2005, 7, 2731-2734.

NC

Cl

HO

O

OH

HO

OOH

MeMe

NC

H

ClO

O

OH

HO

OOH

MeMe

cyanosporaside A

cyanosporaside B

OO

Me

OHO

MeO

O

OH

Cl

HO

O

OH

H OH

H

OH

OO

Me

OHO

MeO

O

OH

H

ClO

O

OH

H OH

H

OH

sporolide A

sporolide B

R1

R2

R1 = H, R2 = Clor R1 = Cl, R2 = H

[O]

[O][O]

R

H

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Natural Products Sharing a Unique Structure

Oh, D.-C.; Williams, P. G.; Kauffman, C. A.; Jensen, P. R.; Fenical, W. Org. Lett. 2006, 8, 1021-1024.Buchanan, G. O.; Williams, P. G.; Feling R. H.; Kauffman, C. A.; Jensen, P. R.; Fenical, W. Org. Lett. 2005, 7, 2731-2734.

NC

Cl

HO

O

OH

HO

OOH

MeMe

NC

H

ClO

O

OH

HO

OOH

MeMe

cyanosporaside A

cyanosporaside B

OO

Me

OHO

MeO

O

OH

Cl

HO

O

OH

H OH

H

OH

OO

Me

OHO

MeO

O

OH

H

ClO

O

OH

H OH

H

OH

sporolide A

sporolide B

R

+ "magic"

+ "HCl"

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Examples of Nine-Membered Enediynes

OO

O

O

O

O

OOH

Me

OMeO

Me

OHOHMeHN

OHHO

O

O

OOH

OMe

HO

Cl

O

OH

NH

O

ClMeO

HOMeH

HO OOHO

H

OH

Me NH

O Me

HOMe

neocarzinostatin chromophore N1999A2

maduropeptinchromophore

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Examples of Nine-Membered Enediynes

O

HO

HO

N

OOH

Me

HOMe Cl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore

OClHO

O

O

O

O

HNO

OMe

O

O

OH2N

Me

Me

HO OH

NMe2

C-1027 chromophore

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Two Types of Nine-Membered Enediynes

OHHO

O

O

OOH

OMe

HO

Cl

N1999A2

O

O

HO

HO

N

OOH

Me

HOMe Cl

HN

O

OOH

MeNMe2

O

O

Ar

O

proposed kedarcidin chromophore

[O]

Bergman cyclization Myers cyclization

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Ten-Membered Enediyne Natural Products

MeSSS

OHO

H

OO

O

O

NH

OOS

O

O

O

Me

NHCOOMe

EtHNMeO

OH

MeMeI

OMeOMe

MeHO

MeO OH

HO

calicheamicin !1I

HNOH

OH

O

O OH

COOH

OMe

Me

O

dynemicin A

MeSSS

OHO

H

OO

O

O

Me

NHCOOMe

i-PrHNMeO

HO

MeS

O

N

NHHO

shishijimicin A

HNO

O OH

Me

OOH

OH

uncialamycin

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Bergman Cyclization

Jones, R. R.; Bergman, R. G. J. Am. Chem. Soc. 1972, 94, 660-661.

H

H

D

D

D

D

H

H

200 oC

D

D

D

D

! p-Benzyne diradical intermediate

MeOH, 200 oCOH+ no

OMe

H

HCCl4

Cl

Clheat

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Bergman Cyclization

Nicolaou, K. C.; Zuccarello, G.; Ogawa, Y.; Schweiger, E. J.; Kumazawa, T. J. Am. Chem. Soc. 1988, 110, 4866-4868.

! Nicolaou's distance theory based on calculation and experiments

CompoundRingsize

c…d distance ° stability

CH2

c

d

9 2.84

A

unknown,should cyclize

(CH2)2 10 3.25 cyclize at 25 oC

(CH2)3 11 3.61 stable at 25 oC

4.12stable at 25 oCt1/2 = 30 s at 200 oC

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Bergman Cyclization

Snyder, J. P. J. Am. Chem. Soc. 1989, 111, 7630-7632.Magnus, P.; Fortt, S.; Pitterna, T.; Snyder, J. P. J. Am. Chem. Soc. 1990, 112, 4986-4987.

! Magnus-Snyder least motion/strain energy theory

TBSO

O

c

d

TBSO

O

c...d distance °A

3.391

3.368 (oxime)

relative rate of Bergman cyclization at 124 oC

650

1

Global strain energy of starting material and productshould be considered for complex molecules

strain energy releaseafter cyclization kcal

6.0

-1.5

(cyclohexanone adopts achair conformer in product)

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Bergman Cyclization

Perrin, C. L.; Rodgers, B. L.; O'Connor, J. M. J. Am. Chem. Soc. 2007, 129, 4795-4799.

H

H

D

D

D

D

H

H

200 oC

! Nucleophiles can react with p-benzyne diradical, producing phenyl anion

LiX, HOAc

DMSO, 37 oCX X

H

!G = -80 to -100 kJ/mol

can be treated as towards halides

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Bergman Cyclization

Oh, D.-C.; Williams, P. G.; Kauffman, C. A.; Jensen, P. R.; Fenical, W. Org. Lett. 2006, 8, 1021-1024.

! Cyanosporasides from enediyne precursor

NC

Cl

HO

O

OH

HO

OOH

MeMe

NC

H

ClO

O

OH

HO

OOH

MeMe

cyanosporaside A

cyanosporaside B

NC

OH

OO Me

Me

OHO

HO

pre-cyanosporaside

Bergmancyclization

NC

OO

OH

HO

OOH

MeMe +

in seawater

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Bergman Cyclization

! Bergman cyclization of calicheamicin

S

OHO

H

OSugar

NHCOOMe

Nu:

SS

MeS-

OHO

OSugar

NHCOOMe

OHO

OSugar

NHCH2OOMeS

OHO

OSugar

NHCH2OOMeS

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Bergman Cyclization

! Bergman cyclization of dynemicin

HNOH

OH

O

O OH

COOH

OMe

Me

O

dynemicin A

HNOH

OH

OH

OH OH

COOH

OMe

Me

O

HNOH

OH

O

OH OH

COOH

OMe

Me

HO

Nu:

HNOH

OH

OH

OH OH

COOH

OMe

Me

HO

Nu

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Bergman Cyclization

! Bergman cyclization of dynemicin

HNOH

OH

OH

OH OH

COOH

OMe

Me

HO

Nu

HNOH

OH

OH

OH OH

COOH

OMe

Me

HO

Nu

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Myers Cyclization

Myers, A. G. Tetrahedron Lett. 1987, 28, 4493-4496.

OO

O

O

O

O

ArO

OMe

OHOHMeHN

Nu:

OO

O

ArCOO

O

OH

OMe

OHOHMeHN

Nu

ArCOO

OO

Me

OHOHMeHN

Nu

OO

OH

O

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DNA Cleavage with Diradical

OO

O

O

O

O

OOH

Me

OMeO

Me

OHOHMeHN

neocarzinostatin chromophore

binds DNAminor groove

favors T, A rich sequences

Naphthoate parallels DNA base pairs

positively charged amino sugar interactswith phosphate

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DNA Cleavage with Diradical

OO

O

O

O

O

ArO

OMe

OHOHMeHN

Nu:

ArCOO

OO

Me

OHOHMeHN

Nu

OO

OH

O

O

O

P

ThymineO

HH

P

O

O

P

ThymineO

P

O2O

O

P

ThymineO

P

OO

downstreamreactions

DNA cleavage

Goldberg, I. H. Acc. Chem. Res. 1991, 24, 191-198.

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Enediyne Natural Products Are Polyketides

OO

O

O

O

O

OOH

Me

OMeO

Me

OHOHMeHN

neocarzinostatin chromophore

HNOH

OH

O

O OH

COOH

OMe

Me

O

dynemicin A

cleaved

Liang, Z.-X. Nat. Prod. Rep. 2010, 27, 499-528.

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Apoprotein of Nine-Membered Enediynes

Baker, J. R.; Woolfson, D. N.; Muskett, F. W.; Stoneman, R. G.; Urbaniak, M. D.; Caddick, S. ChemBioChem 2007, 8, 704-717.

• Nine-membered enediynes isolated with apoproteins except N1999A2

• Apoproteins protect and transport enediynes

• Apoproteins have about 110 amino acids

• Structural features of apoproteins avoid:

external nucleophile attack,

electrophile activation of epoxides,

H-abstraction of diradical intermediatesneocarzinostatin

OHHO

O

O

OOH

OMe

HO

Cl N1999A2

OO

O

O

O

O

OOH

Me

OMeO

Me

OHOHMeHN

neocarzinostatin chromophore

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Neocarzinostatin Chromophore

OO

O

O

O

O

OOH

Me

OMeO

Me

OHOHMeHN

neocarzinostatin chromophore

1957 isolation of carzinostatin

1965 isolation of neocarzinostatin

1972 Bergman cyclization

1979 1:1 noncovalent complex of a protein and chromophore was identified

1985 gross structure of neocarzinostatin chromophore was identified

1987 ten-membered enediynes were found Myers cyclization proposed

1988 relative and absolute stereochemistry of neocarzinostatin chromophore was determined

1996 the aglycon was synthesized

1998 neocarzinostatin chromophore synthesized

Nan Ji, PhD thesis, Harvard University 2006.

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Maduropeptin Chromophore

Schroeder, D. R.; Colson, K. L.; Klohr, S. E.; Zein, N.; Langley, D. R.; Lee, M. S.; Matson, J. A.; Doyle, T. W. J. Am. Chem. Soc. 1994, 116, 9351-9352.

O

OH

NH

O

ClMeO

HRH

HO OOHO

H

OH

Me NH

O Me

HOMe

Tris•HCl and MeOH R = OMe, Cl, OH

isolation condition product composition

without Cl-, and MeOH R = OMe, OH

use EtOH instead of MeOH R = OEt

DNA cleaving ability

R = Cl > R = OMe

enhanced ability in basic media

no DNA scission upon adding thiol

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Maduropeptin Chromophore

Schroeder, D. R.; Colson, K. L.; Klohr, S. E.; Zein, N.; Langley, D. R.; Lee, M. S.; Matson, J. A.; Doyle, T. W. J. Am. Chem. Soc. 1994, 116, 9351-9352.

O

N

O

ClMeO

H

HO OOHO

H

OH

Me NH

O Me

HOMe

OH

O

N

O

ClMeO

H

HO OOHO

H

OH

Me NH

O Me

HOMe

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C-1027 Chromophore

Yoshida, K.-i.; Minami, Y.; Otani, T.; Tada, Y.; Hirama, M. Tetrohedron Lett. 1994, 35, 5253-5256.

OClHO

O

O

O

O

HNO

OMe

O

O

OH2N

Me

Me

HO OH

NMe2

OClHO

O

O

O

O

HNO

OMe

O

O

OH2N

Me

Me

HO OH

NMe2

in apoprotein

H

H

kH/kD = 3.8

EtOH

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C-1027 Chromophore

Yoshida, K.-i.; Minami, Y.; Otani, T.; Tada, Y.; Hirama, M. Tetrohedron Lett. 1994, 35, 5253-5256.

°bond order: 1.21, 1.44 A°bond order: 1.35, 1.41 AR1

R2

R3

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C-1027 Chromophore

Hirama, M. et. al. J. Am. Chem. Soc. 2000, 122, 720-721.

OClHO

O

O

O

O

HNO

OMe

O

O

OH2N

Me

Me

HO OH

NMe2

OClHO

O

O

O

O

HNO

OMe

O

O

OH2N

Me

Me

HO OH

NMe2

in apoprotein

H-abstraction pdt.

slow

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Drugs from Enediynes ---- Mylotarg

S

OHO

H

OO

O

O

NH

OOS

O

O

O

Me

NHCOOMe

EtHNMeO

OH

MeMeI

OMeOMe

MeHO

MeO OH

HO

SNH

ON

MeMe Me

OO

NH

hP67.6

By Wyeth, and later Pfizer

For treatment of acute myeloid leukemia

2000 to 2010

Withdrawn by Pfizer in 2010 due to side effects

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Drugs from Enediynes ---- Mylotarg

http://www.biology.iupui.edu/biocourses/Biol540/6secondwavequestionCSS.html

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Drugs from Enediynes ---- SMANCS

Maeda, H. Advanced Drug Delivery Reviews 2001, 46, 169-185.

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Drugs from Enediynes ---- SMANCS

Maeda, H. Advanced Drug Delivery Reviews 2001, 46, 169-185.

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Total Synthesis of Nine-Membered Enediynes

O

HO

HO

N

OOH

Me

HOMe Cl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore

O

OH

NH

O

ClMeO

HOMeH

HO OOHO

H

OH

Me NH

O Me

HOMe

maduropeptin chromophore

Fast synthesis of fragments

Correct sequence to assemble

Mild reaction conditions in late stage

Courage, prudence and persistance

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Total Synthesis of Nine-Membered Enediynes

Professor Andrew G. Myers

Harvard University

Professor Masahiro Hirama

Tohoku University

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Total Synthesis of Proposed Kedarcidin Chromophore

O

HH

O

NCl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (1997)

O

HO

HO

N

OOH

Me

HOMe Cl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (2007)

O

OOH

MeHO

Me

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

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Total Synthesis of Proposed Kedarcidin Chromophore

O

HH

O

NCl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (1997)

O

OOH

MeHO

Me

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

etherification

glycosylation

lactonization

peptide coupling

Enediyne core should be synthetizedat a relatively late stage

Correct protecting groups

Powerful while mild conditions

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Total Synthesis of Proposed Kedarcidin Chromophore

Myers, A. G.; Horiguchi, Y. Tetrahedron Lett. 1997, 38, 4363-4366.

! Naphthoate synthesis

OO

HO

O

1. PPh3, DEAD, i-PrOH

2. aq. NaOH, 93%

iPrO

HOOH

1. CH(OEt)3, SnCl4

2. MeI, K2CO3, 79%

iPrO

MeOOMe

CHO

EtOO O

OEt91%

HOAc, piperidine

iPrO

MeOOMe

OEtO

O

OEt

E/Z = 1:1

1. KHMDS, TESCl

2. dilute with PhH, then h!

iPrO

MeOOMe

OTES

O

OEt

1, NaOH

2. PivCl, py

38% - 64%

iPrO

MeOOMe

OPiv

O

OH

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Total Synthesis of Proposed Kedarcidin Chromophore

Myers, A. G.; Hogan, P. C.; Hurd, A. R.; Goldberg, S. D. Angew. Chem. Int. Ed. 2002, 41, 1062-1067.Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Chloropyridine synthesis

N

HO

Cl

formalin

NaHCO3, 81% N

HO

ClOH

1. MOMCl, 81%

2. Swern [O], 92% N

MOMO

Cl CHO

S+H2N

O-

Me

NCl

MOMO

NS+

O-

Me

OMe

OTi(Oi-Pr)3

Ti(OEt)4

93%

-78 oC, 94%, 91 deNCl

MOMO

HNS+

O-

MeCOOMe

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Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Chloropyridine synthesis

NCl

MOMO

HNS+

O-

MeCOOMe

MeOH, AcCl

93%

NCl

HO

NH2•HClCOOMe

Boc2O, NEt3

84%

NCl

HO

NHBocCOOMe

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Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Core synthesis

O

OO

MeMe

O

DIBAL

96% O

OO

MeMe

HO

LDA, TMSCHN2

81%

OO

MeMe

OH

LHMDS, TESCl;LHMDS, TESCl

OO

MeMe

OTES

TES

1. 3HF•NEt3

2. Swern [O]

OO

MeMe

CHO

TES

PPh3, CBr4

NEt3, 78%

OO

MeMe

TES

Br

Br

Page 39: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Core synthesis

OO

MeMe

TES

Br

Br HF, H2O, 98%

SO2Cl2, NEt3,DMAP, 63%

OSO

OO

TES

Br

Br

NCl

HO

NHBocCOOMe

1. KHMDS

2. H2SO4, H2O3. TBSCl, Imidazole 82% overall

NCl

O

BocHN COOMe

BrBr

TES

TBSO

1. LiOH, H2O2

2. FmOH, DMAP, 93%Me

NO2

O

O O

Me

NO2

NCl

O

BocHN COOFm

BrBr

TES

TBSO

Page 40: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Core synthesis

NCl

O

BocHN COOFm

BrBr

TES

TBSO

TMSOTf

lutidine

NCl

O

H2N COOFm

BrBr

TES

TBSO

iPrO

MeOOMe

OPiv

O

OH

EDC

HOBt

iPrO

MeOOMe

OPiv

O

OBt

NaHCO3

97%

NCl

O

HN COOFm

BrBr

TES

TBSO

iPrO

MeOOMe

OPiv

O

Page 41: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

O

HH

O

NCl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (1997)

O

OOH

MeHO

Me

Page 42: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Core synthesis

OO

CHO

Me Me1. LiTMS

2. PDC, 86%

OO

Me Me

OH

TMS

OO

Me Me

TMS

O

MgBr

HgCl2, 64%, 4:1 dr

LHMDS,TESCl, 97%

OO

Me Me

OTES

TMSTES

1. HF, H2O

2. K2CO3, MeOH

93%

OHHO

OH

TES

AcCl, py

82%

OHAcO

OH

TES

Page 43: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. Org. Lett. 2007, 9, 1923-1925.

! Suger synthesis

HO Me

O

NH2

OH 1. HCl, MeOH

2. paraformaldehyde MgSO4, H2, Pd/C 90%

MeO Me

O

NMe2

OH AcCl, py

93%MeO Me

O

NMe2

OAc

LHMDSthen MOMBr78%

O

MeNMe2

MOMO

OH2, Pd(OH)2

TFE, 82%

O

MeNMe2

MOMO

O1. AcCl, TFE2. DBU

3. DEIPSCl, Im. 76%

O

MeNMe2

DEIPSO

O

Page 44: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. Org. Lett. 2007, 9, 1923-1925.

! Core synthesis

O

MeNMe2

DEIPSO

ODIBAL

88%

O

MeNMe2

DEIPSO

OHDAST

O

MeNMe2

DEIPSO

F

Cp2HfCl2,

AgClO4

OH

TES

OAc

O

ONMe2

ODEIPS

Me

K2CO3, MeOH

50% overallOH

TES

OH

O

ONMe2

ODEIPS

Me

OH

TES

OAc

OH

Page 45: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

O

HH

O

NCl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (1997)

O

OOH

MeHO

Me

Page 46: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Core synthesis

OH

TES

OH

O

ONMe2

ODEIPS

Me

NCl

O

HN COOFm

BrBr

TES

TBSO

iPrO

MeOOMe

OPiv

O

Sonogashira, 61%

NCl

O

HN COOFm

Br

R

TBSO

iPrO

MeOOMe

OPiv

O

OH

R

OH

O

ONMe2

ODEIPS

Me

R = TES

Page 47: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Core synthesis

NCl

O

HN COOFm

Br

R

TBSO

iPrO

MeOOMe

OPiv

O

OH

R

OH

O

ONMe2

ODEIPS

Me

R = TES

1. NEt3, 2. DMAPMe

NO2

O

O O

Me

NO2

NCl

O

HN

Br

R

TBSO

iPrO

MeO

OMe

OPiv

O

OH

R

O

O

ONMe2

ODEIPS

MeO

66%

R = TES1.7 : 1 atropisomersin C6D6

Page 48: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Glaser coupling

NCl

O

HN

Br

R

TBSO

iPrO

MeO

OMe

OPiv

O

OH

R

O

O

ONMe2

ODEIPS

Me

R = TES1.7 : 1 atropisomersin C6D6

O

1. AgNO3, 73%2. Cu(OAc)2, CuI, py, 59%

NCl

O

HN

iPrO

MeO

OMe

OPiv

O

OH

O

O

ONMe2

ODEIPS

MeO

BrH

HH

TBSO

9 : 1 atropisomers in C6D6

Page 49: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Transannular cyclization

LHMDS, then t-BuLi,quenched with HOAc immediately (< 3 s)

52%N

Cl

O

HN

iPrO

MeO

OMe

OPiv

O

OH

O

O

ONMe2

ODEIPS

MeO

BrH

HH

TBSO

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

TBSOOH

9 : 1 atropisomersin C6D6

Page 50: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Advanced stage

1. TBAF, o-nitrophenol

2. PivCl, NEt3, 76%

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

TBSOOH

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

HOOH

Page 51: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Advanced stage

Ph2MeCOOH, VO(acac)2

28%

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

HOOH

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

HOOH

O

1.5 : 1 atropisomersin C6D6

Page 52: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Advanced stage

AgPF6, DTBMP

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

HOOH

1.5 : 1 atropisomersin C6D6

O

O SPhMe

TESOHO Me

O

HH

O

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

O

OOH

MeTESO

Me

OH

59%

1.5 : 1 atropisomersin C6D6

Page 53: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! Advanced stage

Martin's sulfurane

65%

O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

OOH

1 : 1 atropisomersin C6D6

O

O

HH

O

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

O

OOH

MeTESO

MeO

OHMe

TESOMe 1.5 : 1 atropisomers

in C6D6

Page 54: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

! End game

TBAF, o-nitrophenol

then 3HF•NEt3, 50%O

HH

NCl

HN

O

OODEIPS

MeNMe2

O

OO

OPiv

MeO

MeOOiPr

O

1.2 : 1 atropisomersin C6D6

O

O

HH

O

NCl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOOiPr

O

OOH

MeHO

MeO

OHMe

TESOMe 1 : 1 atropisomers

in C6D6

Page 55: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Total Synthesis of Proposed Kedarcidin Chromophore

O

HH

O

NCl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (1997)

O

HO

HO

N

OOH

Me

HOMe Cl

HN

O

OOH

MeNMe2

O

OO

OH

MeO

MeOO Me

Me

proposed kedarcidin chromophore (2007)

O

OOH

MeHO

Me

Ren, F.; Hogan, P. C.; Anderson, A. J.; Myers, A. G. J. Am. Chem. Soc. 2007, 129, 5381-5383.

Page 56: The Chemistry of Nine-Membered Enediyne Natural Productschemlabs.princeton.edu/macmillan/wp-content/... · The Chemistry of Nine-Membered Enediyne Natural Products Zhang Wang MacMillan

Unfinishable Mission?

OClHO

O

O

O

O

HNO

OMe

O

O

OH2N

Me

Me

HO OH

NMe2

C-1027 chromophore

O

N

O

ClMeO

H

HO OOHO

H

OH

Me NH

O Me

HOMe

OH

real maduropeptin chromophore?


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