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G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
- ORCID and DataCite - incentivizing data sharing
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Gudmundur ‘Mummi’ Thorisson <[email protected]>Brookes lab
Department of Genetics, University of Leicester
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
The data sharing problem
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From http://www.nature.com/news/specials/datasharing/
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
The data sharing problem
2
From http://www.nature.com/news/specials/datasharing/
analysedsynthesisedinterpreted
Information
published
Knowledge
Publication
Data
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Lack of incentives for sharing
• Effort required to prepare, package and submit data
• Time better spent writing papers & grants
• All stick (funders, journals) - no carrots
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• “[...] Many of the issues regarding data availability can be addressed if the principles of “publication” rather than “sharing” are applied. However, online data publication systems also need to develop mechanisms for data citation and indices of data access comparable to those for citation systems in print journals”
• Costello, M. Motivating Online Publication of Data. BioScience (2009) vol. 59 (5) pp. 418-427
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010 4
Publishing a journal article
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010 4
Publishing a dataset
Publishing a journal article
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
???
Register and log in
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
???
Register and log in
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010 6
G. Thorisson, Univ. [email protected]
Associate account with ORCID ID
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Metadata: describe dataset
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G. Thorisson, Univ. [email protected]
ORCID ID: A-883-2010
Title: Hologram of Icelandic 9th century viking bowlSummary: Found in archeological dig in central Reykjavik
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Metadata: describe dataset
7
G. Thorisson, Univ. [email protected]
ORCID ID: A-883-2010
Title: Hologram of Icelandic 9th century viking bowlSummary: Found in archeological dig in central Reykjavik
Co-contributor 1: [enter ORCID ID]Co-contributor 2: [enter ORCID ID][...]
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Upload data and complete submission
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G. Thorisson, Univ. [email protected]
ORCID ID: A-883-2010
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Upload data and complete submission
8
G. Thorisson, Univ. [email protected]
ORCID ID: A-883-2010
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Outcome 1/3
• Dataset is published online:
Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010) Hologram of Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. Available online at http://www.psychoceramicsarchive.org/data/98fsdf855
• Unambiguous attribution via ORCID identifiers
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Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Outcome 1/3
• Dataset is published online:
Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010) Hologram of Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. Available online at http://www.psychoceramicsarchive.org/data/98fsdf855
• Unambiguous attribution via ORCID identifiers
9
BUT, wait, there’s more!
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Outcome 2/3
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DOI + metadata
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Outcome 2/3
• doi:10.4259/psycho.5gtpq-thorisson => http://www.psychoceramicsarchive.org/data/98fsdf855
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DOI + metadata
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Outcome 3/3
11
DOI <-> ORCID ID
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
Outcome 3/3
11
DOI <-> ORCID ID
• A-883-2010 <created> 10.4259/psycho.5gtpq-thorisson
• C-035-2009 <created> 10.4259/psycho.5gtpq-thorisson
• A-101-2010 <created> 10.4259/psycho.5gtpq-thorisson
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
• Who contributed to dataset 10.4259/psycho.5gtpq-thorisson?
• All data publications by A-883-2010 ?
• Which papers have cited the works of A-883-2010 ?
• Total no. citations to datasets by A-883-2010 in the last 2 years?
• Total no. downloads of datasets by A-883-2010?
• [....]
12
G. Thorisson, Univ. [email protected]
ORCID ID: A-883-2010
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010
• Who contributed to dataset 10.4259/psycho.5gtpq-thorisson?
• All data publications by A-883-2010 ?
• Which papers have cited the works of A-883-2010 ?
• Total no. citations to datasets by A-883-2010 in the last 2 years?
• Total no. downloads of datasets by A-883-2010?
• [....]
12
G. Thorisson, Univ. [email protected]
ORCID ID: A-883-2010
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010 13
Text
?????
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010 14
Should we worry or be happy?
Wednesday, 8 September 2010
G. A. Thorisson, University of Leicester www.gen2phen.org
Science Online London, Sep 3-4 2010 15
GEN2PHEN Consortiumhttp://www.gen2phen.org/about-gen2phen/partners
Prof Anthony J. Brookes Bioinformatics Group
This work has received funding from the European Community's Seventh Framework Programme (FP7/2007-2013)under grant agreement number 200754 - the GEN2PHEN project.
Acknowledgements
Contact me! Gudmundur A. Thorisson
<[email protected]>http://friendfeed.com/mummi
http://www.linkedin.com/in/mummi
Wednesday, 8 September 2010
