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Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development...

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Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program Office Office of Surveillance, Epidemiology and Laboratory Services CDC Wednesday, March 7, 2012 CDC’s Informatics Research and CDC’s Informatics Research and Development Activity (IRDA) Development Activity (IRDA) and and R&D Lab R&D Lab
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Page 1: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Tom Savel, MD, Director

Brian Lee, Acting Deputy Director

Informatics Research & Development Activity

Public Health Surveillance & Informatics Program Office

Office of Surveillance, Epidemiology and Laboratory Services

CDC

Wednesday, March 7, 2012

CDC’s Informatics Research andCDC’s Informatics Research and Development Activity (IRDA) Development Activity (IRDA)

and and R&D LabR&D Lab

Page 2: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Informatics Research & Development Informatics Research & Development Activity (IRDA)Activity (IRDA)

A resource to CDC and the public health community that studies, prototypes, and tests new and innovative technology-based tools and resources to maximize programmatic public health impact.

Our philosophy is, “Better, faster, low-cost experiments for how technology can improve public health.”

Page 3: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

The R&D Lab: The R&D Lab: History & CurrentHistory & Current

Physical space created in 2007 Within NCPHI’s Division of Informatics Shared Services Predominantly a resource for NCPHI Focused on R&D Activities

Testing and Hosting hardware and software solutions Responding to Public Health Emergencies

Created with a separate network from CDC Unit/Activity organized in January 2010 Security C&A in October 2010 Agency resource in October 2010

Page 4: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

R&D Lab WebsiteR&D Lab Website

Page 5: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

http://www.phiresearchlab.org

Web address for R&D LabWeb address for R&D Lab

Page 6: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Lab ServicesLab Services

Applied Public Health Informatics Research Cloud – lab provides 1+ virtual machines for 3+ months, accessed remotely (for free) Test and profile non-CDC supported software Community Engagement (UAT, JAD, Social Media) Open Source Development

Prototype – gain insight by building software to test concepts and refine requirements

Consultation – explore innovation options Evaluation – structured review of technology for

public health audience

Page 7: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Lab OrganizationLab Organization

Brian LeeActing Deputy Director

InfrastructureInfrastructure Consultation & Evaluation

Consultation & Evaluation

Tom Savel, MDDirector

PrototypingPrototyping

Dale LaValleyLead Technology

Engineer

Greg LedbetterDeveloper (SRA)

Sara BrownUX Designer (SRA)

Page 8: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

IRDA TeamsIRDA Teams

Research and Innovation Team• Provides consultation; develops guidelines, evaluations,

recommendations to CDC & public health community• e.g., evaluating new open source data mining, GIS, and visualization

tools

Prototype Development Team• Expertise in hardware and software design and development• e.g., MMWR for iPad , STD Guidelines for iPhone, & web apps….

Laboratory Infrastructure and support team• Develops and maintains secure, dynamic environment in which to

experiment and carry out research• (i.e., R&D sandbox hosting, aka…. R&D Lab Research cloud)

Page 9: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

The Public Health Informatics Research CloudThe Public Health Informatics Research Cloud

Page 10: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Lab ManagerLab Manager

Page 11: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

The R&D Lab: The R&D Lab: InfrastructureInfrastructure

Internet Connectivity: Dedicated 10 MB Fiber & DSL backup

Cloud: Infrastructure: VMWare™ - based VM Capacity- ~5000 Live, simultaneous VMs – 400

Environments: Windows, Linux, Mac OS X, SQL Server, Oracle, MySQL, and others.

Hardware Architecture Dell, HP, Wyse Thin Client, Apple Mobile devices (Apple iPad, Motorola Xoom, Blackberry

Playbook, Barnes & Noble Nook) 19 Computers – Physical Lab

Page 12: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

The R&D Lab: The R&D Lab: SecuritySecurity

Enclave network isolated from CDC using physical controls

Rules of Behavior: No PHI/PII – Synthetic Data Only No interdependence with production systems No SLA

Page 13: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

R&D Lab Cloud vs. Amazon CloudR&D Lab Cloud vs. Amazon Cloud

Granularity of control (performance, etc.) Degree of Customization offered (VLAN creation,

etc.) Relationship to CDC Subject Matter Expertise Physical Location

– CDC Campus

Terremark example…

Page 14: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Project OverviewProject Overview

Total Projects*: 67 Under Review: 0 Approved: 46 Completed/Retired: 17 Engagement Types:

Internal: 6 External: 48 Collaborative:13

* as of 2/21/12

Page 15: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Research Project Management SystemResearch Project Management System

Page 16: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Selected Prototype EngagementsSelected Prototype Engagements PTT Advisor PHTweet Public Health News STD Treatment Guide eBook / iPhone App MMWR for iPad SAMwise+ NHSN Central Line Insertion Practices iPhone App Situation Awareness Dashboard

Page 17: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Selected Partner EngagementsSelected Partner Engagements Chronic Kidney Disease Web Portal Evaluation – NCCDPHP –

Pre-release Partner Feedback Health Statistics Web Presentation Prototype – NCHS – Testing

new technology platform SDN Multi-Platform Certificate Testing – ITSO – Cross-browser

testing Universal Data Collection External User Acceptance Testing –

NCBDDD – External UAT Biosurveillance Registry Alternatives Analysis – PHSPO –

Multiple pilots of different software configuration Arctic Investigations Program Legacy Systems Testing –

NCEZID – Dynamic server and client environments

Page 18: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

Central Line Insertion Practices (CLIP) Adherence Monitoring for iPad Submission of data to NHSN

Real-time data entry and submission using app Replacing / supplementing web-based data entry, usually at end of the day

HL7 Clinical Document Architecture (CDA) for Data Exchange REST Web Service API for App-NHSN communication

(Facility Location) Intuitive and simple UI

Page 19: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, CLIPDemonstrations, CLIP

Source: http://www.cdc.gov/nhsn/forms/57.125_CLIP_BLANK.pdf

Page 20: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, CLIPDemonstrations, CLIP

Source: http://www.cdc.gov/nhsn/forms/57.125_CLIP_BLANK.pdf

Page 21: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

Situation Awareness Dashboard Redesign Visual Prototype Modular Approach - Widgets allow composability  Multi-Platform Support - Different Widgets written in

different technologies Widgets use/give off data as web API/web services

(JSON/XML) Leveraging HTML5, Web API Different views based on security & functional roles

Page 22: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Situation Awareness Demonstrations, Situation Awareness DashboardDashboard

Page 23: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

PTT Advisor Diagnostic algorithms Clinical Decision Support Embedded in iPhone platform

Page 24: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, PTT AdvisorPTT Advisor

Page 25: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

PHTweet Situational Awareness Tool Leveraging real-time Twitter data

Page 26: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, PHTweetDemonstrations, PHTweet

Page 27: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, PHTweetDemonstrations, PHTweet

Page 28: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, PHTweetDemonstrations, PHTweet

Page 29: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

Public Health News Novel way to visualize Google News Treemap Algorithm

Page 30: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Public Health NewsDemonstrations, Public Health News

Page 31: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

CDC 2010 STD Guidelines for iPhone v1 vs. v2

Page 32: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 33: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 34: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 35: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 36: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 37: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 38: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, Demonstrations, STD GuidelinesSTD Guidelines

Source: 2010 CDC STD Treatment Guidelines, http://www.cdc.gov/std/treatment/2010/

Page 39: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

MMWR for the iPad “MMWR Navigator” Standard method for displaying data on iPad Split-view controller

Page 40: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR NavigatorDemonstrations, MMWR Navigator

Page 41: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR NavigatorDemonstrations, MMWR Navigator

Page 42: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR NavigatorDemonstrations, MMWR Navigator

Page 43: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Navigator

Page 44: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Navigator

Page 45: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

MMWR for iPad (prototype II) - Map Navigator

Page 46: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 47: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 48: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 49: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 50: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 51: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 52: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, MMWR Map Navigator

Page 53: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

DemonstrationsDemonstrations

SAMwise+ (Suitability Assessment of Materials) Automating the process of assessing messages and

material for conformance with health literacy standards

Prototyped foundation for further development

Page 54: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, SAMwise+Demonstrations, SAMwise+

Page 55: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, SAMwise+Demonstrations, SAMwise+

Page 56: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, SAMWise+Demonstrations, SAMWise+

Page 57: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Demonstrations, SAMWise+Demonstrations, SAMWise+

Page 58: Tom Savel, MD, Director Brian Lee, Acting Deputy Director Informatics Research & Development Activity Public Health Surveillance & Informatics Program.

Questions?

The findings and conclusions in this report are those of the authors and do not necessarily represent the official position of the Centers for Disease Control and Prevention.

For more information, please contact Centers for Disease Control and Prevention

1600 Clifton Road NE, Atlanta, GA 30333Telephone, 1-800-CDC-INFO (232-4636)/TTY: 1-888-232-6348E-mail: [email protected] Web: www.atsdr.cdc.gov

Thank you


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