+ All Categories
Home > Science > Tracing the signals of brain evolution in Eutherian mammals.

Tracing the signals of brain evolution in Eutherian mammals.

Date post: 17-Jul-2015
Category:
Upload: ambuj-kumar
View: 200 times
Download: 2 times
Share this document with a friend
Popular Tags:
10
Transcript

 

s  Data  import  package  (FETCHSEQ)  <-­‐  Today  

s  ConCat  Utility  

s  Network  construction  package  (EvoIntNet)  

s  Coevolution  study  (Biology)  

 

 

 

 

Brain  Evolution  Herculano-­‐Houzel  (2012)  PNAS  

Edited, based on Imported tree 1

Sarcophilus harrisiiMonodelphis domesticaDasypus novemcinctusTrichechus manatusLoxodonta africanaEchinops telfairiChrysochloris asiaticaOrycteropus aferElephantulus edwardiiCondylura cristataSorex araneusErinaceus europaeusCeratotherium simumEquus przewalskiiEquus caballusPanthera tigrisFelis catusCanis lupusUrsus maritimusAiluropoda melanoleucaMustela putoriusLeptonychotes weddelliiOdobenus rosmarusPteropus alectoEptesicus fuscusMyotis davidiiMyotis brandtiiMyotis lucifugusVicugna pacosCamelus dromedariusCamelus bactrianusCamelus ferusSus scrofaBalaenoptera acutorostrataPhyseter catodonLipotes vexilliferTursiops truncatusOrcinus orcaPantholops hodgsoniiOvis ariesCapra hircusBubalus bubalisBos taurusBison bisonBos mutusTupaia chinensisOchotona princepsOryctolagus cuniculusSpermophilus tridecemlineatusHeterocephalus glaberFukomys damarensisCavia porcellusChinchilla lanigeraOctodon degusJaculus jaculusNannospalax galiliRattus norvegicusMus musculusMicrotus ochrogasterPeromyscus maniculatusMesocricetus auratusCricetulus griseusGaleopterus variegatusOtolemur garnettiiTarsius syrichtaCallithrix jacchusSaimiri boliviensisRhinopithecus roxellanaChlorocebus sabaeusPapio anubisMacaca fascicularisMacaca mulattaNomascus leucogenysPongo abeliiGorilla gorillaPan troglodytesPan paniscusHomo sapiens CCDS

Results  Gene   dN/dS   dS   GC  

ASPM   -­‐0.0304,  0.57   0.235,  0.75   0.23,  0.81  

CEP152   0.31,  0.83   0.0909,  0.6   0.272,  0.77  

CEP63   0.184,  0.74   0.402,  0.83   -­‐0.106,  0.68  

STIL   -­‐0.546,  0.87   0.784,  1   -­‐0.627,  1  

CENPJ   -­‐0.228,  0.77   0.335,  0.82   -­‐0.124,  0.65  

MCPH1   0.114,  0.63   0.309,  0.8   0.311,  0.87  

CDK5RAP2   -­‐0.305,  0.9   0.31,  0.71   0.204,  0.85  

WDR62   -­‐0.00431,  0.53   0.395,  0.89   -­‐0.0242,  0.51  


Recommended